mRNA_P-littoralis_Contig1635.2.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1635.2.3
Unique NamemRNA_P-littoralis_Contig1635.2.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A7S3MCV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCV7_9STRA)

HSP 1 Score: 480 bits (1235), Expect = 1.260e-159
Identity = 240/424 (56.60%), Postives = 303/424 (71.46%), Query Frame = 3
Query:  534 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQR-IVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRDNAVLASD-DSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWSTSQLP 1799
            P T K +  FLGL+NYFRDH+PDMT   K LR+L+  + K   + W P   ++F   RD+VA CP LFF   N  +VVMTDASDYG+GAYIFQI++ KE PI+F SK+LHGA+LNW+TIEKEAYAIF TL     LLRD KF ++TDHKNLTYIN  SSQKVRRW + +QE++F +EHV G++N VAD+ SRL  +++ P K +    A++      +IPD  Y  I+  HNS  GHFG+EKTL  + Q  + WKG+R+H++QFI+QCP+CQ   +  + +K  PFT A+Y PMEVLNVDTIGP+  DE GN FILV+IDCF+RWVELF  PDTSA +AA+ALL H GR+G P  +RSD+G QF N +I++       + E T AYSKEENAIVERANKEVMRHLRA++YD R    W   QLP
Sbjct:   72 PRTQKDLQAFLGLINYFRDHIPDMTSHEKPLRALIDTSKKNTTLTWHPLAVEKFHTARDIVARCPALFFVDANATIVVMTDASDYGVGAYIFQIIDGKEKPIIFFSKALHGAELNWATIEKEAYAIFLTLSKFGHLLRDNKFLLKTDHKNLTYINAGSSQKVRRWGIAMQEYDFIIEHVPGKDNFVADSLSRLVANNS-PVKPEVPTLALIPEVFPRRIPDEHYSVISDFHNSTVGHFGVEKTLGNIFQGGKKWKGMRKHVRQFIQQCPLCQKLRETHLAIKTRPFTTASYTPMEVLNVDTIGPVDPDEDGNTFILVIIDCFTRWVELFPTPDTSAKSAADALLQHVGRYGAPATLRSDQGSQFVNGIIEEFNKFALIQHEPTLAYSKEENAIVERANKEVMRHLRAIIYDQRSQKCWGKHQLP 494          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A3D2R4B9_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3D2R4B9_9PROT)

HSP 1 Score: 348 bits (894), Expect = 1.400e-105
Identity = 181/432 (41.90%), Postives = 271/432 (62.73%), Query Frame = 3
Query:  534 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINL-ESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPA-------KGDPRDNAVLASDDS--KIPDAEYRK----IARVHNSRSGHFGLEKTLEALRQ-SDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 1784
            P T   ++ +LGL NYFR+++ D     + LR +V+ N  ++++W       F +++D + N P LFF  +   + + TDA + GIG Y++Q+ E KE+PI F S  L G++L W+T EKEAYA++ ++   + LL D KFTI+TDHKNL Y+N  +SS KV RWKMFLQ+F+FDL+H+ G+ N  AD  SRL   + +           +  D   +   DS   I   EY K    I + HNS  GH G E+T+  L++ + +TWKG+R+++++FI +CP CQ   D ++++K+ P+    + PM+ LN+D IGP PKDE GN +ILV ID FSR+VEL  +PD  A T A+A L   GR+G P  + SD  P++ + ++ +L+ L   E   T  YS EEN++VERANKEV+RHL+A+V+D +++  WS
Sbjct:  243 PITSGNLMSYLGLCNYFRENIKDYAKLEEPLRKMVKPNKLEKLIWLQNELDAFKKLKDEIYNMPLLFFIDDKLPIYLNTDACESGIGGYLYQVKEGKEVPIGFYSSKLRGSELQWNTYEKEAYAVYMSVCQFQYLLTDAKFTIKTDHKNLLYMNQNDSSNKVLRWKMFLQQFDFDLQHIPGKENIPADLASRLYEGETQRTINMASFQLANIHDETEMNHMDSIEDIHRIEYEKHDEIINQYHNSTVGHHGFERTMRLLKERAHKTWKGMRKNVREFINKCPHCQFMQDVQLKLKLIPYHVMTWRPMDRLNIDHIGPFPKDEQGNVYILVCIDVFSRFVELIPVPDREAVTTAKATLQWIGRYGTPYELLSDNAPEYLSNVMQELLKLADIEHLKTLPYSHEENSVVERANKEVVRHLKAIVFDKKLWPSWS 674          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A418RMC7_9GAMM (Uncharacterized protein n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=A0A418RMC7_9GAMM)

HSP 1 Score: 344 bits (883), Expect = 3.980e-102
Identity = 181/430 (42.09%), Postives = 259/430 (60.23%), Query Frame = 3
Query:  525 LSAPTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIV-WSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQI-VEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRL-CYSDAKPAKGDPRDNAVLASDDS-------KIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 1784
            +S PTT KQ+  FLGL +YFR H+       + LR+L+      R V WS E    F+ +++ +  CP LFFP +   VVV TDASDYGIG Y+ QI  E KE+PI F+SKSL   +  W+TIEKE +AI  T+K HE LLRD +F ++TDH NL Y+N   SQKV RWKM L  ++FD+E+V G++N VAD FSRL C        G+      +A++         KIP+ +Y  I   HN  +GH G+  T++ L +    W+G+R H++QF++QC  CQ     K++     ++ ++Y   +++N+DT+    +D  G + +LV++D FSRWV+L+ +    A TAA  +LS+CG +G P+ IR+D G Q  N L+ ++      +    T +S EEN IVERANKEV+RHLRA  +D  V   WS
Sbjct:  495 ISEPTTAKQLRSFLGLTSYFRRHIRGYADLERPLRTLLNDTPAGRSVKWSEEARLAFVNLKEAINACPRLFFPDDQLPVVVYTDASDYGIGGYVCQIDAEGKEIPISFLSKSLSKVEQRWTTIEKECWAIIVTIKKHEYLLRDRRFLLKTDHHNLIYMNEPPSQKVMRWKMALLSYDFDIEYVKGEDNVVADTFSRLLCIHMDNTGTGEDSTIEHIATEPEQVTLPVRKIPEDKYTIIQSFHNQTAGHRGVRATIDKLLEHKHKWQGMREHVRQFVRQCSCCQKMSVIKLETPTHAYSLSSYKVGDMINIDTLTVGEEDADGFKHVLVIVDTFSRWVKLYPLRKLDAVTAASCILSYCGDYGSPLAIRTDNGRQLVNSLLKEIYEAGDIKMFVNTPHSHEENGIVERANKEVLRHLRAYCFDGEVRANWS 924          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A349AXA4_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A349AXA4_9ACTN)

HSP 1 Score: 241 bits (616), Expect = 1.650e-65
Identity = 149/436 (34.17%), Postives = 227/436 (52.06%), Query Frame = 3
Query:  525 LSAPTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIK---QRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRDNAVLASDDSK------------IPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQ-LTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 1784
            ++AP T  Q+  FLG++NYFRD +P +      L  L     K   ++  W  + ++ F   +  +A    L +   +  + + TDA D G GA ++Q+++ ++ P+ F+S +   A+  WST E+EA+A+   +   + LL    F + TDHKNL ++    + KV RW+  L E+NF++ H+AG +NPVADA SRL       A      NA+  +  SK            + D+    I  VH+  +GH G++ T++ L ++      +++ ++  I  C  CQ + + R+   K  P         E  ++D IGPLP DE GN +I+V ID FSR+V L    D S  + A  LL   G FG P  IR+D G Q+ N LID    L+G ++  T AY  + N  VER NKEV RHLR +  D R  N+WS
Sbjct:  493 MTAPQTKTQLRSFLGMLNYFRDSVPMLGPTVVPLSRLAGPKGKGNFKKGEWQEQHQQAFEAAKAAIAGARLLSYLDYSVPIRLRTDACDIGAGAMLYQVIDGQDRPVSFMSHAFSAAERRWSTFEQEAFAVIKAITHWDSLLLGHPFVVETDHKNLCFLYKSDNPKVVRWRTRLSEYNFEVHHIAGIDNPVADALSRLHPVSISAASSV---NALQVAGASKRIPGSTVERPAELDDSVVETIRYVHSEVAGHRGVKATVDKLLRAGHNRPNLQQEVEYVIANCGFCQKIANRRQDDDKSQPRFSEIMDVGEEWSLDKIGPLPADEFGNTYIMVAIDGFSRFVVLEPASDASGESVARFLLKLVGWFGRPKGIRTDGGSQYDNHLIDVFCHLLGFDRHVTLAYRPQANGKVERVNKEVGRHLRFICLDRRFENKWS 925          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A8J6AS69_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AS69_9EUKA)

HSP 1 Score: 235 bits (600), Expect = 7.580e-63
Identity = 137/423 (32.39%), Postives = 220/423 (52.01%), Query Frame = 3
Query:  525 LSAPTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRDNAVLASDDSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTR---AAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVY-NRW 1781
            + APT   ++   LG+VNYFR  +P      + + +L + +      W+ E +  F E+R  + +   L  P    ++ + TDASD GIG  +    +   LP+ F SK+L   Q  WSTIE+E +A+   +    + L    FT  TDH+NL ++   ++ KVRRW++ +  ++F + HVAG++N  AD  SRL                +   D  +I       I+ VH    GH G ++T+  +R     W+G+ + +++FI  CP CQL    +      P+     AA  P  V+ +DT+GPLP    G ++I+V +D F+++ +L+    T+A +A EAL+     FG P  I+SD G Q+ NEL+  L         ++T Y    N IVERAN E++RHLR +++D+R+  +RW
Sbjct:  705 MRAPTNISEVRTLLGMVNYFRPTIPTFADIAEPIIALTRADTP--FAWNSEQQAAFDELRRQLTSGTILTHPRPGDDLHLFTDASDIGIGGVLMVKRDTTFLPVQFFSKTLSATQRRWSTIEQEMFALVSAIDKFSKYLMASHFTAHTDHRNLVWMATSTNPKVRRWRLAVDIYDFTVLHVAGKDNGCADTLSRLL--------------TLSVEDRQEI-------ISSVHGGTEGHLGYKETVRRIRDQYSGWRGMVQDVREFITHCPTCQLQRPNR----PPPYQHHRTAATEPFGVVQLDTLGPLPISPEGFKYIIVAVDTFTKFTKLYPARTTNADSAVEALIDWSAHFGRPREIQSDNGSQYRNELVALLTAAYSIPHHYSTPYRPASNGIVERANAEIVRHLRTLLHDNRMATDRW 1100          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A8J6B8L3_9EUKA (Chromo (CHRromatin Organization MOdifier) domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B8L3_9EUKA)

HSP 1 Score: 231 bits (589), Expect = 1.980e-62
Identity = 148/427 (34.66%), Postives = 224/427 (52.46%), Query Frame = 3
Query:  525 LSAPTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKF----TIRTDHKNLTYINLES--SQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRDNAVLASDDSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYD--DRVYNRW 1781
            L+ P     + G +G  NY    +PD     + L  L +  IK    W+ E +    E+ + VAN   L FP       + TDASD GIG  + Q    +E  + F SK     Q  WST +KE YAI + + T   L    K     T+ +DHKNL +++     S K+ RW++ L E+ F L HVAG++N VADA SRL           P +  +L  D  +IPD     +  +H   +GH  L    +   ++   W+ IR   +Q++++CP+CQ   +   + +V   +     P EV+ +DTIGPLP+  HGNQ+++VVID FS++V+++ +  T A  AAE +   CGR+GVP  I++D+G QF NEL++Q+   +     F+TAY    N IVERAN  ++R LR ++ +  D  +  W
Sbjct:  231 LARPNNMTDLRGIIGKFNYLARFIPDCQ---RVLAPLYE--IKDMGQWTDEHDGIVRELAETVANAAALVFPDLTKPWQLYTDASDEGIGGVLLQGDPGEEQVVAFFSKKFSAVQGRWSTYDKELYAIVHCV-TQPDLAPLFKLHPDLTVCSDHKNLLFLHKRKDLSAKLERWRIILGEYPFRLRHVAGKDNVVADALSRL-----------PMETNLL--DRQQIPDDARALLESLHGGSAGHVPLAAMQD---RAGDRWEEIRPFTRQWVEECPICQKAREPG-RTRVPWHSTQHRQPFEVVQLDTIGPLPQSPHGNQYVVVVIDAFSKYVDVYPVKSTDAQGAAEVVARVCGRWGVPQTIQTDQGSQFRNELVNQVTTRLTLNHRFSTAYHPASNGIVERANGTLVRALRKLLLEAEDDQWEHW 634          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A8J6B4R9_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B4R9_9EUKA)

HSP 1 Score: 231 bits (588), Expect = 1.550e-61
Identity = 147/422 (34.83%), Postives = 220/422 (52.13%), Query Frame = 3
Query:  525 LSAPTTGKQMLGFLGLVNYFRDHL-PDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRDNAVLASDDSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCG-RFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 1784
            +  P+T   +  FLGLVN+F D+L  D    +  L  + +    ++  W+ E +  F  +   + + PTL       ++ ++TDASDYG+G  + Q  +DK  P++++SK+L GAQ  W TIEKE YA+ Y L   E+ LR   FTI TDH NLT ++  ++ KV RW + L++F++D+ HV G  N  AD  SR+C      A  +  +N   AS            I   H     H  + +T++ LR +   W  +R+ +   I  CPVCQ T   +  +     T  A  PM+ L +DT+GP P D    Q ILV++D FSR+VE+  I  T+A  AA  +++H   R GVP  I +D G QF N    +L      +  FT  Y  + N IVER N+E+  H+ A   + +  +RWS
Sbjct:  675 MKPPSTVSGVRSFLGLVNFFHDYLGSDFATISAPLYEITK---HKQFSWTHEAQSAFDTIISRLKSAPTLVHYNPRAKLKLITDASDYGVGGVLLQ--DDK--PLMYLSKALTGAQKRWPTIEKEMYAVVYCLSKAERYLRWAHFTIATDHHNLTRMHQSANAKVARWSLLLEQFSYDVIHVPGIANGAADGLSRVCT-----ALTNSEENPHAAS------------IKEHHTLGGLHLSVNRTVQQLRANGHAWPSMRQAVADVISHCPVCQKTVPTR-PMSSFDLTLQAPFPMDTLCIDTMGPYPIDGEF-QHILVMVDLFSRYVEMTPIRSTTAEEAASCVVNHWFLRHGVPRRIITDSGSQFKNNTFARLCDRNAVDLHFTAPYHHQSNGIVERVNREINAHMMARRLEIKHLDRWS 1070          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: A0A8J6B2I5_9EUKA (WD repeat-containing protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B2I5_9EUKA)

HSP 1 Score: 222 bits (565), Expect = 1.840e-58
Identity = 148/471 (31.42%), Postives = 229/471 (48.62%), Query Frame = 3
Query:  534 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVED-KELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLES-SQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPR-----------DNAVLASDDSKIPDAEY---------------------------------------RK---IARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 1781
            PTT K+M  F+G+V +FR   P +      L   +    + ++ WSPELE+ F+ V+  V     L     N ++++ TDASD G+G  +    +D +E  +   S++ HGA+  W+T EKEA+AI   ++     L+   FTI TDHKNLTY+  ++ S KV RW++ LQEF+F + H+ G++N VAD  SR    +AK A   PR           D+ V  +D  +   AE                                        RK   + R H   + H G   T  AL++    W+G+   +K F+  C   +L    ++Q+++   T     P + + +DT+   P+ E G Q+++ VID F+R+VE++   D SAA+AA+A+    G  G    + SD G +F NE I  LV   G+ Q  T  Y    N   ERAN+ +++ LRAMV +     +W
Sbjct:  405 PTTRKEMRRFIGMVGWFRRFCPKLGEHLAPLNDTLT---QAKVTWSPELEEAFVNVQRGVKAHIKLNHIDYNEDLILRTDASDVGLGGMLCNRTQDGQEAVVAVYSRAFHGAEKRWTTGEKEAFAIVECIRKWRMYLQGYTFTIETDHKNLTYMEQKTASAKVLRWRLALQEFDFHVIHLPGESNVVADTLSRN-LPEAKAAATRPRRHTRRPNRLGDDDFVQIADSEEDTSAEXXXXXXXXXXXXXXXADFTQDAAEARDRERQLATGEMTEERKSEAVTRAHKGMAQHLGRYSTYRALKEKGYVWRGMWEDVKSFVDHCSCQKLASVDQLQLRMG--THMVETPFQKVAIDTLKITPEAESGAQYVVTVIDVFTRYVEIYPSVDKSAASAADAITRWIGNHGPMTTLHSDNGREFINETIAALVARFGTGQSKTFPYHPPSNGGCERANRRILQRLRAMVLEWGEAEQW 869          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: I1CH97_RHIO9 (Uncharacterized protein n=13 Tax=cellular organisms TaxID=131567 RepID=I1CH97_RHIO9)

HSP 1 Score: 210 bits (535), Expect = 2.610e-54
Identity = 140/441 (31.75%), Postives = 224/441 (50.79%), Query Frame = 3
Query:  456 VCGTCNHSRRNFLQRRKAPQGA*LSAPTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLE--SSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPR-------------DNAVLASD-----DSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRA-AYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVER 1715
            + G C  ++ + L  RK         P++GK++  FLGLVNYFR +LP+++  T  L  L  +    ++ W+ E E  F +++ L+++ P L  P       V TDAS+Y IGA ++Q+V+++   I F+++SL  ++ N+ST ++E  A+ + LK     L    FT+ TDHK LTY++ +  ++  +  W   + ++NF + H  G  N + DA SRL +   K  +GD +             + ++L S      D   P  E R+   +     GH G +  + AL      W  ++    + I+ CPVCQ  +  K      P T   A  P + + +DT GP P    GNQ+IL+V+D F+R+  L  +PD S+ T A AL S    FG P +I+SD G ++ NE++   V   G +    +AY    N IVER
Sbjct:  876 LLGFCVDAKGSRLDPRKVTNALTWPRPSSGKEIQRFLGLVNYFRKYLPNISEVTAPLDKLRFEGKLDKL-WTSEQESAFEKIKALLSSAPLLHHPDLEQPFYVATDASNYSIGAVLYQVVKNETRYIGFMARSLSTSEKNYSTTKRELLAVIFALKKFHPFLWGNPFTLYTDHKALTYLHTQPVANAMMINWLDTILDYNFKIIHRPGIQNILPDALSRL-FEPEKTLEGDNKTIKTIVTSQIINSNGSILTSRMMMPADLMTPAPEDRQKLLMDTHLEGHRGAQAIVTALHSDGIHWTKLKEDALEIIRSCPVCQKFNIAKHGYN--PLTSIYADAPWDHICIDTAGPFPTSVQGNQYILLVVDVFTRYCVLKALPDKSSLTIALALRSILSLFGRPKIIQSDNGTEYVNEIVRLYVESSGIDHRLISAYHPRANGIVER 1312          
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Match: I1BWQ9_RHIO9 (Uncharacterized protein n=7 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1BWQ9_RHIO9)

HSP 1 Score: 208 bits (529), Expect = 1.530e-53
Identity = 138/441 (31.29%), Postives = 223/441 (50.57%), Query Frame = 3
Query:  456 VCGTCNHSRRNFLQRRKAPQGA*LSAPTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLE--SSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPR-------------DNAVLASD-----DSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRA-AYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVER 1715
            + G C  ++ + L  RK         P++GK++  FLGLVNYFR +LP+++  T  L  L  +    ++ W+ E E  F +++ L+++ P L  P       V TDAS+Y IGA ++Q+++++   I F+++SL  ++ N+ST ++E  A+ + LK     L    FT+ TDHK LTY++ +  ++  +  W   + ++NF + H  G  N + DA SRL +   K  +GD +             + ++L S      D   P  E R+   +     GH G +  + AL      W  ++    + I+ CP CQ  +  K      P T   A  P + + +DT GP P    GNQ+IL+V+D F+R+  L  +PD S+ T A AL S    FG P +I+SD G ++ NE++   V   G +    +AY    N IVER
Sbjct:  799 LLGFCVDAKGSRLDPRKVTNALTWPRPSSGKEIQRFLGLVNYFRKYLPNISEVTAPLDKLRFEGKLDKL-WTSEQESAFEKIKALLSSAPLLHHPDLEQPFYVATDASNYSIGAVLYQVIKNETRYIGFMARSLSSSEKNYSTTKRELLAVIFALKKFHPFLWGNPFTLYTDHKALTYLHTQPVANAMMINWLDTILDYNFKIIHRPGIQNILPDALSRL-FEPEKTLEGDNKTIKTIVTSQIINSNGSILTSRMMMPADLMTPAPEDRQKLLMDTHLEGHRGAQAIVTALHSDGIHWTKLKEDALEIIRSCPDCQKFNIAKHGYN--PLTSIYADAPWDHICIDTAGPFPTSVQGNQYILLVVDVFTRYCVLKALPDKSSLTIALALRSILSLFGRPKIIQSDNGTEYVNEIVRLYVESSGIDHRLISAYHPRANGIVER 1235          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1635.2.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3MCV7_9STRA1.260e-15956.60Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A3D2R4B9_9PROT1.400e-10541.90Uncharacterized protein (Fragment) n=1 Tax=Methylo... [more]
A0A418RMC7_9GAMM3.980e-10242.09Uncharacterized protein n=1 Tax=Methylococcales ba... [more]
A0A349AXA4_9ACTN1.650e-6534.17Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
A0A8J6AS69_9EUKA7.580e-6332.39Uncharacterized protein n=1 Tax=Carpediemonas memb... [more]
A0A8J6B8L3_9EUKA1.980e-6234.66Chromo (CHRromatin Organization MOdifier) domain n... [more]
A0A8J6B4R9_9EUKA1.550e-6134.83Uncharacterized protein n=1 Tax=Carpediemonas memb... [more]
A0A8J6B2I5_9EUKA1.840e-5831.42WD repeat-containing protein n=1 Tax=Carpediemonas... [more]
I1CH97_RHIO92.610e-5431.75Uncharacterized protein n=13 Tax=cellular organism... [more]
I1BWQ9_RHIO91.530e-5331.29Uncharacterized protein n=7 Tax=Rhizopus delemar (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1635contigP-littoralis_Contig1635:3297..5114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog936053.I1CH97
PFAMsAsp_protease_2,Chromo,RVT_1,Retrotrans_gag,rve
Model size1805
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.29e-53
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3AFVE@33154|Opisthokonta,3PCPI@4751|Fungi,1GXN4@112252|Fungi incertae sedis
DescriptionIntegrase core domain
Cds size1254
COG categoryB
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789790.3573203-UTR-P-littoralis_Contig1635:3296..38471680789790.3573203-UTR-P-littoralis_Contig1635:3296..3847Pylaiella littoralis U1_48UTRP-littoralis_Contig1635 3297..3847 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789790.372789-CDS-P-littoralis_Contig1635:3847..44741680789790.372789-CDS-P-littoralis_Contig1635:3847..4474Pylaiella littoralis U1_48CDSP-littoralis_Contig1635 3848..4474 +
1680789790.3862505-CDS-P-littoralis_Contig1635:4487..51141680789790.3862505-CDS-P-littoralis_Contig1635:4487..5114Pylaiella littoralis U1_48CDSP-littoralis_Contig1635 4488..5114 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1635.2.3prot_P-littoralis_Contig1635.2.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1635 3848..5114 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1635.2.3

>prot_P-littoralis_Contig1635.2.3 ID=prot_P-littoralis_Contig1635.2.3|Name=mRNA_P-littoralis_Contig1635.2.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp
MLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEV
RDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSK
SLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLE
SSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRD
NAVLASDDSKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIR
RHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKD
EHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRS
DKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAM
VYDDRVYNRWSTSQLPS*
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mRNA from alignment at P-littoralis_Contig1635:3297..5114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1635.2.3 ID=mRNA_P-littoralis_Contig1635.2.3|Name=mRNA_P-littoralis_Contig1635.2.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1818bp|location=Sequence derived from alignment at P-littoralis_Contig1635:3297..5114+ (Pylaiella littoralis U1_48)
TGGAGATTCTGCCTTGACTACGTTCGACTGAACGAAGCAACAGTGGGAGT GGAAAGCTGGCCGATTCCAAATATCTCCCAGATGATTCAAAGAATTGGAT CGAAGAAACCGAGAGTTTTTGGCGTCATGGACATGACGTCAGGGTACCAC CAAGCACCCTTATCCGCCGAGTCGCGGGCCCTGAGTGCATTTATTTGCTT CATGGGCGTGTATCACTGGCTTAGAGTCCCGATGGGTCTCAAGAACGCAG GGCCCTATTTCCAACGGGTAATGGCAACTGTAGTTCTAGCCGGTATACTT TATGTGCTGTGCGAACTATACATAGATGATGTCTTTGTATTTGGTAATGA TGATAACGAATTCGTAGATAATCTGAAAGAAGTATTCCTTCGTTTTCGTA AATTTAACATCAGCCTAAATCCCAAGAAATGCAGACTCGGTCTGGAAAGC GTAGAGTTTGTGGGACATGTAATCACAGCAGAAGGAATTTCCTTCAGCGA AGAAAAGCGCCTCAAGGTGCTTAACTTTCCGCCCCAACTACGGGAAAACA AATGCTGGGCTTCTTGGGCCTAGTGAACTATTTCAGGGACCACCTCCCGG ATATGACCGGAAGGACAAAGAGCCTCCGCAGCCTTGTTCAGAAGAACATA AAGCAGAGGATTGTATGGTCTCCCGAATTAGAGAAAGAGTTTATTGAGGT GCGTGACCTCGTGGCGAACTGCCCGACACTATTCTTTCCCATTGAGAATG GGGAAGTAGTGGTCATGACCGATGCGTCAGACTACGGCATAGGAGCTTAC ATCTTCCAAATTGTGGAAGACAAAGAGCTTCCTATTTTGTTCGTGAGCAA GTCCCTACATGGGGCTCAGCTAAACTGGTCGACAATTGAGAAGGAGGCAT ACGCCATTTTCTACACATTGAAGACACACGAGCAGTTGCTACGGGACATC AAGTTCACCATCCGCACGGACCATAAGAACTTAACATACATCAACCTAGA GAGCTCACAGAAGGTGAGACGATGGAAGATGTTTCTGCAGGAGTTTAACT TCGACTTGGAGCATGTAGCCGGGCAGAACAATCCTGTCGCAGATGCATTT TCAAGGCTATGTTACTCCGACGCAAAACCTGCAAAGGGGGACCCGCGCGA CAACGCAGTCCTAGCTTCTGATGACTCTGTCTGATAGACAGAAGATCCCC GATGCAGAATACAGAAAGATCGCAAGGGTTCACAACTCGCGAAGCGGGCA CTTTGGTCTTGAGAAGACACTTGAAGCCCTGCGTCAGTCCGACCAAACCT GGAAAGGTATTCGGAGACACATCAAACAATTCATCAAGCAATGCCCAGTC TGCCAATTGACAGATGATCGGAAGATCCAAGTCAAAGTAGCCCCTTTTAC GCGCGCAGCCTACCTCCCAATGGAAGTTCTGAACGTGGACACCATAGGAC CACTACCAAAAGATGAACATGGAAATCAGTTCATTTTGGTGGTCATCGAC TGCTTCTCTCGATGGGTAGAGCTGTTCGGAATTCCCGATACTTCGGCGGC AACTGCGGCGGAAGCGTTACTATCGCATTGCGGGCGATTTGGAGTTCCTG TGTTGATACGATCAGACAAGGGACCTCAGTTCGCAAATGAATTGATCGAC CAATTGGTTCTTTTGATGGGTTCTGAGCAGGAATTCACCACGGCATACTC CAAGGAGGAGAACGCAATAGTGGAACGTGCTAACAAAGAAGTGATGCGTC ATTTAAGAGCCATGGTTTATGACGACAGAGTCTATAACCGTTGGTCGACG TCGCAATTACCCTCGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1635:3297..5114+

>mRNA_P-littoralis_Contig1635.2.3 ID=mRNA_P-littoralis_Contig1635.2.3|Name=mRNA_P-littoralis_Contig1635.2.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig1635:3297..5114+ (Pylaiella littoralis U1_48)
ATGCTGGGCTTCTTGGGCCTAGTGAACTATTTCAGGGACCACCTCCCGGA
TATGACCGGAAGGACAAAGAGCCTCCGCAGCCTTGTTCAGAAGAACATAA
AGCAGAGGATTGTATGGTCTCCCGAATTAGAGAAAGAGTTTATTGAGGTG
CGTGACCTCGTGGCGAACTGCCCGACACTATTCTTTCCCATTGAGAATGG
GGAAGTAGTGGTCATGACCGATGCGTCAGACTACGGCATAGGAGCTTACA
TCTTCCAAATTGTGGAAGACAAAGAGCTTCCTATTTTGTTCGTGAGCAAG
TCCCTACATGGGGCTCAGCTAAACTGGTCGACAATTGAGAAGGAGGCATA
CGCCATTTTCTACACATTGAAGACACACGAGCAGTTGCTACGGGACATCA
AGTTCACCATCCGCACGGACCATAAGAACTTAACATACATCAACCTAGAG
AGCTCACAGAAGGTGAGACGATGGAAGATGTTTCTGCAGGAGTTTAACTT
CGACTTGGAGCATGTAGCCGGGCAGAACAATCCTGTCGCAGATGCATTTT
CAAGGCTATGTTACTCCGACGCAAAACCTGCAAAGGGGGACCCGCGCGAC
AACGCAGTCCTAGCTTCTGATGACTCTAAGATCCCCGATGCAGAATACAG
AAAGATCGCAAGGGTTCACAACTCGCGAAGCGGGCACTTTGGTCTTGAGA
AGACACTTGAAGCCCTGCGTCAGTCCGACCAAACCTGGAAAGGTATTCGG
AGACACATCAAACAATTCATCAAGCAATGCCCAGTCTGCCAATTGACAGA
TGATCGGAAGATCCAAGTCAAAGTAGCCCCTTTTACGCGCGCAGCCTACC
TCCCAATGGAAGTTCTGAACGTGGACACCATAGGACCACTACCAAAAGAT
GAACATGGAAATCAGTTCATTTTGGTGGTCATCGACTGCTTCTCTCGATG
GGTAGAGCTGTTCGGAATTCCCGATACTTCGGCGGCAACTGCGGCGGAAG
CGTTACTATCGCATTGCGGGCGATTTGGAGTTCCTGTGTTGATACGATCA
GACAAGGGACCTCAGTTCGCAAATGAATTGATCGACCAATTGGTTCTTTT
GATGGGTTCTGAGCAGGAATTCACCACGGCATACTCCAAGGAGGAGAACG
CAATAGTGGAACGTGCTAACAAAGAAGTGATGCGTCATTTAAGAGCCATG
GTTTATGACGACAGAGTCTATAACCGTTGGTCGACGTCGCAATTACCCTC
GTGA
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