mRNA_P-littoralis_Contig1635.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A7S3MCV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCV7_9STRA) HSP 1 Score: 332 bits (851), Expect = 1.700e-99 Identity = 221/578 (38.24%), Postives = 314/578 (54.33%), Query Frame = 2
Query: 614 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQR-IVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDAKPAKGDPRDNAVLASDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPS---QSSPFYARSLPPNGSSERGHHRTTTKR*TWKSV---HFGGHRLLLSMGRAVRNSRYF---GGNCGGSVTIALRAIWSSCVDTIRQGTSVRK*IDRPIGSFDGF*AGIHHGILQGGERNSGTC*QRSDASFKSHG----L*RQSL*PLVDVAITLVMRILNSQEKARTGVSPAEILFGNAVDLGRYLLYRP--KSDPNPDRDLSTYLEQMLDRQKTLIEVARDSQQEFDSHHMSEFDPEFTDYPLQSYVLWAHPGDKRSKLHARYLGPFQVVERSQDAYKIQDLVSGKLHET 2299
P T K + FLGL+NYFRDH+PDMT K LR+L+ + K + W P ++F RD+VA CP LFF N +VVMTDASDYG+GAYIFQI++ KE PI+F SK+LHGA+LNW+TIEKEAYAIF TL LLRD KF ++TDHKNLTYIN SSQKVRRW + +QE++F +EHV G++N VAD+ SRL +++ P K + A++ + D + D S + + + ++ +++ + + Q + P+ + + ++ PF S P T V G +L+ + R F + + L+ + + + ++ I F+ F A I H + +R++ H ++S + LVMRILNS+EK TG+SPAEILFGN V+LGR++++ P S +P+ LS Y+E++L +Q TLIEVA+ +Q E DSHH+S FDP FT++P+ SYVL P KR KL R GP+QV+ Y +QDLVSGK ET
Sbjct: 72 PRTQKDLQAFLGLINYFRDHIPDMTSHEKPLRALIDTSKKNTTLTWHPLAVEKFHTARDIVARCPALFFVDANATIVVMTDASDYGVGAYIFQIIDGKEKPIIFFSKALHGAELNWATIEKEAYAIFLTLSKFGHLLRDNKFLLKTDHKNLTYINAGSSQKVRRWGIAMQEYDFIIEHVPGKDNFVADSLSRLVANNS-PVKPEVPTLALIP-EVFPRRIPDEHYSVISDFHNSTVGHFGVEK-----TLGNIFQGGKKWKGMRKHVRQFIQQCPLCQKLRETHLAIKTRPFTTASYTP---------MEVLNVDTIGPVDPDEDGNTFILVIIDCFTRWVELFPTPDTSAKSAADALLQHVGRYGAPATLRSDQGSQFVNGIIEEFNKF-ALIQHEPTLAYSKEENAIVERANKEVMRHLRAIIYDQRSQKCWGKHQLPLVMRILNSEEKTNTGLSPAEILFGNTVNLGRHIMHTPITPSGDSPE-PLSAYMEKLLTQQATLIEVAQATQAEHDSHHLSTFDPAFTEFPINSYVLLDPPEGKRPKLQTRKKGPYQVINSIGPKYVLQDLVSGKNFET 631
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A3D2R4B9_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3D2R4B9_9PROT) HSP 1 Score: 315 bits (807), Expect = 2.390e-90 Identity = 206/625 (32.96%), Postives = 323/625 (51.68%), Query Frame = 3
Query: 69 EPN-DWRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFPPQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVTSWRTARHYSFPLRMGK*WS*PMRQTTA*ELTSSKLWKTKSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSCYGTSS------SPSARTIRT*HTST*RAHRR*DDGRC-----FCRSLTSTWSM*PGR----TILSQMHFQGYVTPTQNLQRGTRATTQS*LLMTLSDR-QKIPDAEYRK----IARVHNSRSGHFGLEKTLEALRQ-SDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 1877
+PN WRF +D+ RLNE T+ + +PIP I ++I +I S+KP VFG MD+T GYHQ P+ E R + FI G+Y W R+PMGL NAG YFQ+++ T VL G+ + Y+DD+ + + EF++NL+EV RF K NI +NP KC GL+ +E +GH I+ EG +FS EK V +FP + + + + + + + L L N + + Y+ PL P+ T + S + +L+ + + +LR ++T+ + + Y + + + TI+T H + ++ + F + PG+ L+ ++G T N+ A M D + I EY K I + HNS GH G E+T+ L++ + +TWKG+R+++++FI +CP CQ D ++++K+ P+ + PM+ LN+D IGP PKDE GN +ILV ID FSR+VEL +PD A T A+A L GR+G P + SD P++ + ++ +L+ L E T YS EEN++VERANKEV+RHL+A+V+D +++ WS
Sbjct: 61 KPNMKWRFAIDFRRLNE-TLLKKGFPIPRIKEIIDQIASRKPNVFGKMDLTHGYHQIPIDEECRDYTTFITSRGLYKWNRLPMGLTNAGQYFQKILRTEVLCGLSDHVVIPYLDDMHLATQTEEEFIENLREVLKRFDKHNIFVNPSKCFFGLDKLEILGHEISKEGTTFSREKLQGVNDFPLPITSGNLMSYLGLCNYFRENIKDYAKLEEPLRKMVKPNKLEKLIWLQNELDAFKKLKDEI-----YNMPLLFFIDDKLPIYLNT--DACESGIG---GYLYQVKEGKEVPIGFYSSKLRGSELQWNTYEKEAYAVYMSVCQFQYLLTDAKFTIKTDHKNLLYMNQNDSSNKVLRWKMFLQQFDFDLQHIPGKENIPADLASRLYEGETQRTINMASFQLANIHDETEMNHMDSIEDIHRIEYEKHDEIINQYHNSTVGHHGFERTMRLLKERAHKTWKGMRKNVREFINKCPHCQFMQDVQLKLKLIPYHVMTWRPMDRLNIDHIGPFPKDEQGNVYILVCIDVFSRFVELIPVPDREAVTTAKATLQWIGRYGTPYELLSDNAPEYLSNVMQELLKLADIEHLKTLPYSHEENSVVERANKEVVRHLKAIVFDKKLWPSWS 674
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A418RMC7_9GAMM (Uncharacterized protein n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=A0A418RMC7_9GAMM) HSP 1 Score: 271 bits (694), Expect = 2.150e-73 Identity = 192/639 (30.05%), Postives = 305/639 (47.73%), Query Frame = 3
Query: 75 NDWRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFPPQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVTSWRTARHYSFPLRMG-----------K*WS*PMRQTTA*ELTSSKLWKTKSFLFCS*AS----PYMGLS*TGRQLRRRHTPFSTH*RHTSSCYGTSSSPSARTIRT*HTST*RAHR---R*DDGRCFCRSLTSTWSM*PGRTILSQMHFQ-GYVTPTQNL--------------QRGTRATTQS*LLMTLSDR-----QKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 1877
N +RF +D+ LN T + +PNI ++++ IG ++P F VMD+TSG+HQAPL SR +AF+ G++ W RV MGL+N+ YFQ +M VL G++ C+LY+DD ++G EF+D L V RF+ + +++NP KC+ GL+ +E+VG+ I G+SFS EK L+V N IS T+ + FRR RG L ++LL + R+ + +S R+ P Q T + + ++ A P LS + ++ +R T C+ TI+ H R R + D + + + + L F YV N+ GT + + T ++ +KIP+ +Y I HN +GH G+ T++ L + W+G+R H++QF++QC CQ K++ ++ ++Y +++N+DT+ +D G + +LV++D FSRWV+L+ + A TAA +LS+CG +G P+ IR+D G Q N L+ ++ + T +S EEN IVERANKEV+RHLRA +D V WS
Sbjct: 319 NKYRFTVDFRLLNSVTKPIGG-VLPNIPRLLEDIGVQRPEWFAVMDLTSGFHQAPLDVASRKYTAFVTHRGIFQWKRVGMGLRNSPAYFQNMMERQVLKGLIGDCCQLYMDDCIIYGRTAEEFLDRLNRVLKRFQDYGMTINPDKCKFGLQEIEYVGYTINKVGVSFSREKLLEVYN------------------ISEPTTAKQLRSFLGLTSYFRRH-IRGYADLERPLRTLLNDTPAGRSVK-WSEEARLAFVNLKEAINACPRLFFPDDQLPVVVYTDASDYGIGGYVCQIDAEGKEIPISFLSKSLSKVEQRWTTIEKE------CWAI-----IVTIKK-HEYLLRDRRFLLKTDHHNLIYMNEPPSQKVMRWKMALLSYDFDIEYVKGEDNVVADTFSRLLCIHMDNTGTGEDSTIEHIATEPEQVTLPVRKIPEDKYTIIQSFHNQTAGHRGVRATIDKLLEHKHKWQGMREHVRQFVRQCSCCQKMSVIKLETPTHAYSLSSYKVGDMINIDTLTVGEEDADGFKHVLVIVDTFSRWVKLYPLRKLDAVTAASCILSYCGDYGSPLAIRTDNGRQLVNSLLKEIYEAGDIKMFVNTPHSHEENGIVERANKEVLRHLRAYCFDGEVRANWS 924
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8J6AS69_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AS69_9EUKA) HSP 1 Score: 195 bits (496), Expect = 8.880e-48 Identity = 167/619 (26.98%), Postives = 274/619 (44.26%), Query Frame = 3
Query: 75 NDWRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNF--PPQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVT--SWRTARHYSFP-----LRMGK*WS*PMRQTTA*ELTSSKLWKTKSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSCYGTSSSPSARTIRT*HTST*RAHRR*DDGRCFCRSLTST------WSM*PGRTILSQMHFQGYVTPTQNLQRGTRATTQS*LLMTLSDRQKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTR---AAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVY-NRW 1874
N R CLD+ RLN+ T E P+P I ++ ++ + +D++ + Q PL ESR +AFI YH+ R+P GL+NA + QR + V+ A L+ +YIDD+ V G +EF+ NL+ V R N+ +N KK L ++++G +T G S S ++ +L+ P + E + T+ G + R + F + +L R T +W + + +F L G + P T + L + ++ + + L +ST + + S + + T AH D R TST W + + +H G G T L +++ DRQ+I I+ VH GH G ++T+ +R W+G+ + +++FI CP CQL + P+ AA P V+ +DT+GPLP G ++I+V +D F+++ +L+ T+A +A EAL+ FG P I+SD G Q+ NEL+ L ++T Y N IVERAN E++RHLR +++D+R+ +RW
Sbjct: 532 NSIRLCLDFRRLNDITEPDEH-PLPLIEDLLDQLEGSA--YYATLDLSKAFLQVPLDPESRQYTAFIADNHKYHYCRMPFGLRNAAIHMQRALEKVMGAD-LFTAALVYIDDIVVMGKTRSEFLKNLRSVLERLDDANVRVNLKKTILAAHEIDYLGWHVTPTGRSISPDRLEPILSMRAPTNISEVR--------TLLGMVNYF-----RPTIPTFA--------DIAEPIIALTRADTPFAWNSEQQAAFDELRRQLTSGTILTHPRPGDDLHLFTDASDIGIGGVLMVKRDTTFLPVQFFSKTLSATQRRWSTIEQEMFALVSAIDKFSKYLMASHFT----AHT---DHRNLVWMATSTNPKVRRWRLAVDIYDFTVLHVAGK-------DNGCADTLSRLLTLSVEDRQEI-------ISSVHGGTEGHLGYKETVRRIRDQYSGWRGMVQDVREFITHCPTCQLQRPNR----PPPYQHHRTAATEPFGVVQLDTLGPLPISPEGFKYIIVAVDTFTKFTKLYPARTTNADSAVEALIDWSAHFGRPREIQSDNGSQYRNELVALLTAAYSIPHHYSTPYRPASNGIVERANAEIVRHLRTLLHDNRMATDRW 1100
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8J6B8L3_9EUKA (Chromo (CHRromatin Organization MOdifier) domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B8L3_9EUKA) HSP 1 Score: 192 bits (487), Expect = 3.610e-47 Identity = 168/615 (27.32%), Postives = 277/615 (45.04%), Query Frame = 3
Query: 84 RFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEK--RLKVLNFPPQLRENKCWASWA**TISGT---TSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLR-CVTSWRTARHYSFPLRMGK*WS*PMRQTTA*ELTSSKLWKTKSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSCYGTSSSPSAR---------TIRT*HTST*RAHRR*DDGRCFCRSLTSTWSM*PGRTILSQMHFQ-GYVTPTQNLQRGTRATTQS*LLMTLSDRQKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYD--DRVYNRW 1874
R C+D +N T + +P+P++ + + F MD+TSGYHQ + E + F+ ++R P GL+NA FQR M LA +L+ +YIDD+ + E++ L+ VF R + L PKKC G +SVE VG VI G SE + L+ L P + + + I G +R P+ QR A L+ + + + ++R + A FP + K W T + L ++ ++ +ST+ + + + P T+ + H + H+R D + W R IL + F+ +V N+ A ++ + L DRQ+IPD + +H +GH L + ++ W+ IR +Q++++CP+CQ + + +V + P EV+ +DTIGPLP+ HGNQ+++VVID FS++V+++ + T A AAE + CGR+GVP I++D+G QF NEL++Q+ + F+TAY N IVERAN ++R LR ++ + D + W
Sbjct: 61 RLCVDLTAVNNVTKP-DRFPLPDLRSFVHEAAGAE--WFSSMDLTSGYHQMKVRPEDVFKTGFVTPDDYCEFVRTPFGLRNAPAVFQREMQRS-LAPVLHKGACVYIDDILNYARTAEEYLATLRTVFECLRAARLRLAPKKCTFGAKSVEVVGFVIDGTGSRVSESRIASLRALARPNNMTDLRG--------IIGKFNYLARFIPDCQRVLAPLYE---IKDMGQWTDEHDGIVRELAETVANAAALVFP-DLTKPWQ---------LYTDASDEGIGGVLLQGDPGEEQVVAFFSKKFSAVQGRWSTYDKELYAIVHCVTQPDLAPLFKLHPDLTVCSDHKNLLFLHKRKD-----LSAKLERW-----RIILGEYPFRLRHVAGKDNVVAD--ALSRLPMETNLLDRQQIPDDARALLESLHGGSAGHVPLAAMQD---RAGDRWEEIRPFTRQWVEECPICQKAREPG-RTRVPWHSTQHRQPFEVVQLDTIGPLPQSPHGNQYVVVVIDAFSKYVDVYPVKSTDAQGAAEVVARVCGRWGVPQTIQTDQGSQFRNELVNQVTTRLTLNHRFSTAYHPASNGIVERANGTLVRALRKLLLEAEDDQWEHW 634
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: UPI00193E5CCB (LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193E5CCB) HSP 1 Score: 177 bits (448), Expect = 2.790e-43 Identity = 165/583 (28.30%), Postives = 256/583 (43.91%), Query Frame = 3
Query: 84 RFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFP-----PQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVTSWRTARHYSFPLRMGK*WS*PMRQTTA*ELTSSKLWKTKSFLFCS*ASPYMGL-S*TGRQLRRRHTPFSTH*RHTSSCYGTSSSPSARTIRT*HTST*RAHRR*DDGRCFCRSLTST----WSM*PGRTILSQMHFQGYVTPTQNLQRGTRATTQS*LLMTLSDRQKIPDAEYRKIARVHNSRSG-HFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFT-RAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHC-GRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEEN 1793
RFC+DY +LN T + +P+P I + R+ F +D+ SGY Q L ++ R +AF G++ + +P GL NA F+R+M V L I+ +C +Y+DDV +F N + NLKEVFLRFRK N+ LNPKKC V+++GHVIT GIS EK + N+P QLR + S+ + G + P LF T ++ + + N E S K K FL +SP + S TG + T S H G + S + +DG + S+ W+ + + F+ +++P + + +L T+ R+ I R + H+S SG HFG+ KTL +R+ W ++ ++ + K C VC + K +PF +P E + +D +GP P G +++LV+ DCFS+WVE F + A+T AE ++ RFGVP+ I +D+G F + L +L L+G + TT + N
Sbjct: 29 RFCVDYRKLNAITKX-DFFPLPRIDSLFDRLSGSS--WFSTLDLKSGYWQVKLRSQDREKTAFSVGNGLWQFTVMPFGLCNAPATFERLMEKV-LHQIINKMCLVYLDDVIIFSNTFEGSLANLKEVFLRFRKANLKLNPKKCSFFGRKVKYLGHVITENGISTDSEKVECIQNWPVPRNKKQLRSFLGFCSYYRKFVKGFSIVAKP--------LFVLTENQNKF-ISN--------------------------------------EECQSAFLKLKQFLM---SSPILSFPSETGEFIL--DTNASNH--------GIGAVLSQKQ---------------EDGEKEIAANDSSSKVYWTQWDSLILKDGVLFRRWISPDLHTE----------ILQTIVPRKFIQ----RVLEEAHDSPSGGHFGVNKTLAKIRKRFY-WAICKQDVEHWCKTCKVCFAKKGPSEKGK-SPFQIYNVGIPFERVQMDILGPFPISSSGKKYLLVITDCFSKWVEAFPTGNIKASTIAEIFVNQVVSRFGVPLEIHTDQGRNFESRLFQELSSLLGIRKTRTTPLHPQSN 516
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A8J6B2I5_9EUKA (WD repeat-containing protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B2I5_9EUKA) HSP 1 Score: 179 bits (453), Expect = 1.450e-42 Identity = 167/675 (24.74%), Postives = 275/675 (40.74%), Query Frame = 3
Query: 81 WRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFP----------------------PQLREN---------KCWASWA**T------------------------------------ISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKS-------LLRCVTSWRT-ARHYSFPLRMGK*WS*PMRQTTA*ELTSSKL--WKTKSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSCYGTSSSPSARTIRT*HTST*RAHRR*DDGRCFCRSLTSTWSM*PGRTILSQMHFQGYVTPTQNLQRGTRATTQS*LLMTLSDRQKIPDAEYRKIARVHNSRSGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVAPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 1874
WR C+DY RLNE T + + P+ ++ +++ +G F +D+ SGY+Q + E R +AF+ G+Y + R+P GLKNA +FQ+ M +V GI V+ +Y+DDV V G E + L+ V R ++N+ LN KC +SVEF+GH++ +GI +++ +++ P P+L E+ + +W+ + G +GQ A A++ SR +G + ++ C+ WR + Y+F + M Q TA S+K+ W+ F G S R+ P + +A T HT R +R DD F + S Q A + L T + + + + R H + H G T AL++ W+G+ +K F+ C +L ++Q+++ T P + + +DT+ P+ E G Q+++ VID F+R+VE++ D SAA+AA+A+ G G + SD G +F NE I LV G+ Q T Y N ERAN+ +++ LRAMV + +W
Sbjct: 233 WRLCVDYRRLNEVTRTLAA-PVRDVQRVLMELGGAT--CFASLDLRSGYNQVLVVEEDRHKTAFVTPGGLYEFNRLPFGLKNAPSFFQQAMESV-FEGISGVI--IYMDDVLVMGRSREELMARLEAVLKRCAEYNLRLNAAKCDFARDSVEFLGHIVDKDGIRLGDDRVQAIMDMPRPTTRKEMRRFIGMVGWFRRFCPKLGEHLAPLNDTLTQAKVTWSPELEEAFVNVQRGVKAHIKLNHIDYNEDLILRTDASDVGLGGMLCNRTQDGQEAVVAVY----SRAFHGAEKRWTTGEKEAFAIVECIRKWRMYLQGYTFTIETDHKNLTYMEQKTA----SAKVLRWRLALQEFDFHVIHLPGESNVVADTLSRNLP---------------EAKAAATRPRRHTR--RPNRLGDDD--FVQIADSEEDTSAEXXXXXXXXXXXXXXXADFTQDAAEARDRERQLAT---GEMTEERKSEAVTRAHKGMAQHLGRYSTYRALKEKGYVWRGMWEDVKSFVDHCSCQKLASVDQLQLRMG--THMVETPFQKVAIDTLKITPEAESGAQYVVTVIDVFTRYVEIYPSVDKSAASAADAITRWIGNHGPMTTLHSDNGREFINETIAALVARFGTGQSKTFPYHPPSNGGCERANRRILQRLRAMVLEWGEAEQW 869
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A2J7R948_9NEOP (RNA-directed DNA polymerase n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7R948_9NEOP) HSP 1 Score: 174 bits (441), Expect = 9.780e-42 Identity = 162/629 (25.76%), Postives = 285/629 (45.31%), Query Frame = 3
Query: 81 WRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFP-PQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVTSWRTARHYSFPLRMGK*WS*PMRQTTA*ELTSSKLWK---------TKSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSC---YGTSSSPSARTIRT*HTST*RAHRR*DDGRCFC-----RSLTSTWSM*P--GRTILSQMHFQGYVTPTQ--------NLQRGTRATTQS*LLMTLSDRQKIPDAEYRKIARVHNSRSG-HFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVA-PFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGR-FGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 1874
WR C+D+ +LNE TVG + +P+PNI ++ ++G + R F +D SGY Q P++ + R +AF G + + R+P GLK+A QR+M V L+ ++ C +Y+DD+ + G +E L+ VF + R+FN+ + P KC E + ++GHV+TAEG+ EK V +FP PQ ++ K + A G Y RK + V AR + L+ W+ ++ T+ EL SKL K +K F+ + AS Y + + + P + R + Y T + + R GR F + LT +++ R + ++ Q Y Q N +R TQ + ++ + D + R IA +++ G H G+++T++ ++ +W GI + + ++IK+C CQ+ + K+ T P + + +D +GPLP E+G ++IL D S++ + + +A +A + + +G+P I +D+G F +++ ++ L ++ TTAY E N +ER +K + +LR + D N W
Sbjct: 32 WRICIDFRKLNEVTVG-DCYPLPNIQDILDKLG--RARYFTALDCASGYLQVPMAEDDRCQTAFSTADGHFEYKRMPFGLKSAPSTLQRMMNNV-LSELIGNKCLVYMDDILLIGESLSEHNSKLQAVFQKLREFNLKIEPDKCEFLKEELNYLGHVVTAEGVKPDREKIKAVTDFPIPQSQDIKSFLGLA-----------------------------GYY-----RKFI---VDFSAIARPLTDLLKKENDWTWTEKEQTSFELLKSKLTKAPLLQYPDFSKPFILTTDASGYAIGAILNQGKLGQDKPIAYASRTLNKAELNYATVEKELLAIVWAC-----KHFRPYLLGRKFQIVTDHKGLTWIFNVKDPSSRLMRWKLLLQEYDYEIQYRAGQRNCNTDSLSRYPTQC---LNINAEEITDDRKQRIIAEMNDCPIGDHQGIQRTIKRIKLY-LSWPGIEQDVTKYIKECKTCQVNKETHPTDKLPLNVTDTKVTPWDKVYLDIVGPLPITENGMKYILTCQDNLSKYFIAMPLQNQTAEEVTKAFVRNIILLYGIPTEIVTDQGSNFMSDIFKRVCKLFKIDKICTTAYHPESNGALERTHKTLTNYLRC--FCDTKLNNW 608
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A2J7QWM2_9NEOP (RNA-directed DNA polymerase n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QWM2_9NEOP) HSP 1 Score: 176 bits (445), Expect = 1.600e-41 Identity = 155/625 (24.80%), Postives = 279/625 (44.64%), Query Frame = 3
Query: 81 WRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFPPQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVTSWRTARHYSFPLRMGK*WS*PMRQTTA*ELTSSKLWKT---------KSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSC---YGTSSSPSARTIRT*HTST*RAHRR*DDGRCFC-----RSLTSTWSM*PGRTILSQ----MHFQGYVTPTQNLQRGTRATTQS*L---LMTLSDRQKIPDAEYRKIARVHNSR-SGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVA-PFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGR-FGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 1874
WR C+D+ +LNE TVG + +P+PNI ++ ++G + R F +D SGY Q P++ E R +AF G + + R+P GLK+A FQR+M V L+ ++ C +Y+DD+ + G E L+EV + R++N+ + P KC + + ++GH++T EG+ E K V+ FP I T I + GL + + ++ AR + L+ W + T+ EL SKL + K F+ + AS Y + + P + R + Y T + + R GR F + LT +++ + L + + Y + +R + A + S + ++ + + + R IA +H+ GH G+++T+E ++ +W G+ + + Q+I++C +CQL + + +K+ T P E + +D +GPLP E G +++L D S++ + + + A A + + +G+P I +D+G F +++ ++ L E+ TTAY E N +ER +K + +LR + DR N W
Sbjct: 461 WRICIDFRKLNEITVG-DCYPLPNIQDILDKLG--RARYFTTLDCASGYLQVPIAEEDRHKTAFSTANGHFEFKRMPFGLKSAPSTFQRMMNDV-LSEVIGTRCLVYMDDILIIGETLREHNAKLREVLQKLREYNLKIEPDKCEFLKKELNYLGHIVTPEGVRPDEGKIKAVVEFP----------------IPKTQKDI-----------------KSFLGLAGYYRKFIADFSA--IARPLTNLLKKDSEWKWSEEEQTSFELLKSKLTSSPLLQYPDFNKPFILTTDASGYAIGAILSQGKLGNDKPIAYASRTLNQAELNYATVEKELLAIVWAC-----KHFRPYLLGRKFQIVTDHKGLTWIFNVKDPSSRLMRWKLLLEEYDYEIQYRAGERNSNADSLSRYPVECLNVNIEELTEERKQRIIAEMHDCPVGGHQGVQRTIERIKLYI-SWPGLDQAVTQYIRECKICQLNKETRQSIKLPLNITDTKATPWEKVYLDVVGPLPMTESGMKYVLTCQDNLSKYFMAIPLQNQTTEEVANAFVKNVILVYGIPSEIVTDQGSNFMSDVFKRICKLFKIEKTHTTAYHPESNGALERTHKTLTNYLRC--FCDRKLNNW 1038
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Match: A0A2J7RJQ6_9NEOP (RNA-directed DNA polymerase n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RJQ6_9NEOP) HSP 1 Score: 172 bits (437), Expect = 4.140e-41 Identity = 154/625 (24.64%), Postives = 278/625 (44.48%), Query Frame = 3
Query: 81 WRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFPPQLRENKCWASWA**TISGTTSRI*PEGQRASAALFRRT*SRGLYGLPN*RKSLLRCVTSWRTARHYSFPLRMGK*WS*PMRQTTA*ELTSSKLWKT---------KSFLFCS*ASPYMGLS*TGRQLRRRHTPFSTH*RHTSSC---YGTSSSPSARTIRT*HTST*RAHRR*DDGRCFC-----RSLTSTWSM*PGRTILSQ----MHFQGYVTPTQNLQRGTRATTQS*L---LMTLSDRQKIPDAEYRKIARVHNSR-SGHFGLEKTLEALRQSDQTWKGIRRHIKQFIKQCPVCQLTDDRKIQVKVA-PFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGR-FGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 1874
WR C+D+ +LNE TVG + +P+PNI ++ ++G + R F +D SGY Q P++ E R +AF G + + R+P GLK+A FQR+M V L+ ++ C +Y+DD+ + G E L+EV + R++N+ + P C + + ++GH++T EG+ E K V+ FP I T I + GL + + ++ AR + L+ W + T+ EL SKL + K F+ + AS Y + + P + R + Y T + + R GR F + LT +++ + L + + Y + +R + A + S + ++ + + + R IA +H+ GH G+++T+E ++ +W G+ + + Q+I++C +CQL + + +K+ T P E + +D +GPLP E G +++L D S++ + + + A A + + +G+P I +D+G F +++ ++ L E+ TTAY E N +ER +K + +LR + DR N W
Sbjct: 33 WRICIDFRKLNEITVG-DCYPLPNIQDILDKLG--RARYFTTLDCASGYLQVPIAEEDRHKTAFSTANGHFEFKRMPFGLKSAPSTFQRMMNDV-LSEVIGTRCLVYMDDILIIGETLREHNSKLREVLQKLREYNLKIEPDICEFLKKELNYLGHIVTPEGVRPDEGKIKAVVEFP----------------IPKTQKDI-----------------KSFLGLAGYYRKFIADFSA--IARPLTNLLKKDSEWKWLEEEQTSFELLKSKLTSSPLLQYPDFNKPFILTTDASGYAIGAILSQGKLGNDKPIAYASRTLNQAELNYATVEKELLAIVWAC-----KHFRPYLLGRKFQIVTDHKGLTWIFNVKDPSSRLMRWKLLLEEYDYEIQYRAGERNSNADSLSRYPVECLNVNMEELTEERKQRIIAEMHDCPVGGHQGVQRTIERIKLYI-SWPGLDQAVTQYIRECKICQLNKETRQSIKLPLNITDTKATPWEKVYLDVVGPLPMTESGMKYVLTCQDNLSKYFMAIPLQNQTTEEVANAFVKNVILVYGIPSEIVTDQGSNFMSDVFKRICKLFKIEKTHTTAYHPESNGALERTHKTLTNYLRC--FCDRKLNNW 610 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1635.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1635.1.1 >prot_P-littoralis_Contig1635.1.1 ID=prot_P-littoralis_Contig1635.1.1|Name=mRNA_P-littoralis_Contig1635.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=215bp MRILNSQEKARTGVSPAEILFGNAVDLGRYLLYRPKSDPNPDRDLSTYLEback to top mRNA from alignment at P-littoralis_Contig1635:3217..5758+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1635.1.1 ID=mRNA_P-littoralis_Contig1635.1.1|Name=mRNA_P-littoralis_Contig1635.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2542bp|location=Sequence derived from alignment at P-littoralis_Contig1635:3217..5758+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1635:3217..5758+ >mRNA_P-littoralis_Contig1635.1.1 ID=mRNA_P-littoralis_Contig1635.1.1|Name=mRNA_P-littoralis_Contig1635.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=645bp|location=Sequence derived from alignment at P-littoralis_Contig1635:3217..5758+ (Pylaiella littoralis U1_48)back to top |