mRNA_P-littoralis_Contig1634.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1634.3.1
Unique NamemRNA_P-littoralis_Contig1634.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.690e-92
Identity = 151/253 (59.68%), Postives = 180/253 (71.15%), Query Frame = 1
Query:   22 QILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQAQEGGWHGLTSRPF--RPPPLLLLCRR-----VPNQH--WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDGISV 750
            Q+LG+GNCFD + QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+T A GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT  FTGATNDKTI++     ++++         T R +  R        RR     V N +  WVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH  E +D IFFTCCILHNMLH+FDG+ V
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQ----YTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDV 282          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 3.550e-89
Identity = 140/253 (55.34%), Postives = 180/253 (71.15%), Query Frame = 1
Query:    4 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQA------QEGGWHGLTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDG 741
            ++L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+ A GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT  FTG+TNDK+I++     ++++       +E   +     P++     LL     ++ WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGR RILKL + YH  EDID +FFTCCILHNMLHS+D 
Sbjct:  158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK-WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDN 409          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 6.710e-88
Identity = 140/239 (58.58%), Postives = 172/239 (71.97%), Query Frame = 1
Query:   19 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQAQEGGWHGLTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHS 732
            L++LG+GNCFD + QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG T A GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT  F G TNDKT ++     ++++ +       T R ++   L  +      +    L+  + Y    +D AFS+ LESVRKDVECFFGILKGR RILKLR+ YH  E ID IFFTCCILHNMLH+
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQ----YTEREYK---LRKVNGTERTRRGCFLIVDNGYYESNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.540e-81
Identity = 133/253 (52.57%), Postives = 171/253 (67.59%), Query Frame = 1
Query:    4 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQA------QEGGWHGLTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDG 741
            Q+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI++     +R++       Q+   +    + F      LL     ++ W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGR RI KL + +H  E ID +FFTCCILHNMLHSFD 
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK-WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 7.510e-80
Identity = 132/253 (52.17%), Postives = 171/253 (67.59%), Query Frame = 1
Query:    4 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQA------QEGGWHGLTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDG 741
            ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI++     +R++       Q+   +    + F      LL     ++ W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGR RI KL + +H  E ID +FFTCCILHNMLHSFD 
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK-WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5JIW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW4_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 2.230e-79
Identity = 132/244 (54.10%), Postives = 157/244 (64.34%), Query Frame = 1
Query:   22 QILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQAQEGGWHGLTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDGISV 750
            ++LG+G CFD + QLS MSKSMA ATFHKF ++FA EMF+EHIYLPTGTY DEVM  + +LG T A GSTDVTH+GW MCPFTLGR FTGKEGFPT+A+EVTVDHAGR + V   FTGATNDKT ++     + ++ +     G   R   P  ++   +RVP    V L                              GILKGR RILKLR+ YH  E ID IFFTCCILHNMLH+FDG+ V
Sbjct:    3 RVLGKGTCFDDVEQLSKMSKSMAQATFHKFRRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGWNMCPFTLGRPFTGKEGFPTIAYEVTVDHAGRTLAVANGFTGATNDKTTIRYDSGVNNIRTEYKLRQGERHRANAPRMVIDGGQRVPRGCGVLL------------------------------GILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDV 216          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 2.610e-79
Identity = 136/245 (55.51%), Postives = 164/245 (66.94%), Query Frame = 1
Query:  100 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQAQEGGWHGLTSRPFR------------------------PPPLLL-----LCRRVPNQH-----WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHS 732
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG T A GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT  FTGATNDKTI++     ++++ +       T R ++                        P  L +     +  ++P+       WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGR RILKLR+ YH  E ID IFFTCCILHNMLH+
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQ----YTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 486          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 4.000e-78
Identity = 135/258 (52.33%), Postives = 167/258 (64.73%), Query Frame = 1
Query:    4 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQAQEGGWHGLTSRPF-------RPPPLLLLCRRVPNQH--WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDG 741
            ++L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+ A+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+ FT +TNDKT V       +++      +  T + F           L      V N +  W  LM P+KYP   +D  FSK LESVRKDVECFFGILKG  RI K+ +AYH  E ID +FFTCCILHNMLH+FDG
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTD----NQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDG 351          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 2.750e-76
Identity = 131/247 (53.04%), Postives = 158/247 (63.97%), Query Frame = 1
Query:   19 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIV--QQSVQGSRVQAQEGGWHGLTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDGISV 750
            L +LG+GNCFD + QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG T A  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT  FTGA NDKT++     V   R ++Q       T R ++                   +  +          FS +     +DVECFFGILKGR RILKLR+ YH  E ID IFFTCCI HNMLH+FDG+ +
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQ------YTERQYK-------------------LRKANGTERTRRGCFSIVDNGYHEDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDL 323          
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 8.650e-75
Identity = 130/254 (51.18%), Postives = 161/254 (63.39%), Query Frame = 1
Query:    4 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIV--QQSVQGSRVQAQEGGWHGLTSRPFRPPPLLLLCRRVPNQ---HWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDG 741
            ++L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF  A+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+ FTG+TNDKTI+   ++V   R   Q         +       L  C  + +     W  L+ PSKYP    D  FSK LESVRKDVECFFGILK R RILKL + Y   E +D +FFTCCILHNMLH+ DG
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDG 380          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1634.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE2.690e-9259.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE3.550e-8955.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE6.710e-8858.58DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KY50_9PHAE1.540e-8152.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE7.510e-8052.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIW4_9PHAE2.230e-7954.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE2.610e-7955.51DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE4.000e-7852.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE2.750e-7653.04DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JBE2_9PHAE8.650e-7551.18Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1634contigP-littoralis_Contig1634:3474..4683 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size750
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.9e-65
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size750
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789790.259344-CDS-P-littoralis_Contig1634:3473..39231680789790.259344-CDS-P-littoralis_Contig1634:3473..3923Pylaiella littoralis U1_48CDSP-littoralis_Contig1634 3474..3923 +
1680789790.2723866-CDS-P-littoralis_Contig1634:4383..46831680789790.2723866-CDS-P-littoralis_Contig1634:4383..4683Pylaiella littoralis U1_48CDSP-littoralis_Contig1634 4384..4683 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1634.3.1prot_P-littoralis_Contig1634.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1634 3474..4683 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1634.3.1

>prot_P-littoralis_Contig1634.3.1 ID=prot_P-littoralis_Contig1634.3.1|Name=mRNA_P-littoralis_Contig1634.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=250bp
RQILTALQILGRGNCFDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIY
LPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGF
PTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVQQSVQGSRVQAQEGGWHG
LTSRPFRPPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRK
DVECFFGILKGRLRILKLRLAYHCGEDIDIIFFTCCILHNMLHSFDGISV
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mRNA from alignment at P-littoralis_Contig1634:3474..4683+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1634.3.1 ID=mRNA_P-littoralis_Contig1634.3.1|Name=mRNA_P-littoralis_Contig1634.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1210bp|location=Sequence derived from alignment at P-littoralis_Contig1634:3474..4683+ (Pylaiella littoralis U1_48)
CGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGA CATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCC ACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTAC CTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGTAAACT GGGTTTTACTACAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGG GCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTT CCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGG CGTCACCCAAGAGTTCACCGGTGCGACCAACGACAAGACGATCGTACAAC AAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAGGGCGGATGGCACGGA GTTCACCCGGAAAGGATGCTATTTGATCGTCGACAACGGCTATCACGAGG TGAGTGTATTGGGGGCGTGGGTAGTATAGAATATCCGACGTAGTGCGTGC TCCGTAACGCTTCTGGTTGATGTGAAGCCCGCACCGAAAAAAAACACGCC GGTGCACCGAAAGCAGACCAAGCGGCCAAGGTAAAACATTTTGTCGGTAC TCAATTTGAGGATTTTTATGCTGGATCCGTTTGGACGGTTTGCGTTCACG TTCTTACATTTCGGGCGTCATTACCCCATTTATAACACCAAGGTTTAAAA AAACAAATCTGCTCAGGGGTGGTCAGATGGCCAAGGTACTTCGAAGTACA AAGTTTAGGCATCTGTGTTCCACATGTCCACACGGTTCCTCGTTCCCCCG AAGAGTTTGATCGTGAAAATATGTGCGTCGGGGCCTGAGGTTTCCAGAGT CTCTCCGTAGCTCACCAGTCGTCCCTTTCGAcCCCCCCCCCTGCTGCTGT TGTGCCGTCGTGTGCCAAATCAACACTGGGTCACCCTCATGGCCCCATCT AAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAGAG TGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCCTCA GAATCCTGAAGCTCCGCCTGGCCTACCACTGCGGGGAAGACATCGATATC ATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCCACTCCTTCGACGG CATTAGCGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1634:3474..4683+

>mRNA_P-littoralis_Contig1634.3.1 ID=mRNA_P-littoralis_Contig1634.3.1|Name=mRNA_P-littoralis_Contig1634.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=750bp|location=Sequence derived from alignment at P-littoralis_Contig1634:3474..4683+ (Pylaiella littoralis U1_48)
CGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGA
CATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCC
ACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATCTAC
CTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGTAAACT
GGGTTTTACTACAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGG
GCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTT
CCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGG
CGTCACCCAAGAGTTCACCGGTGCGACCAACGACAAGACGATCGTACAAC
AAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAGGGCGGATGGCACGGA
CTCACCAGTCGTCCCTTTCGAcCCCCCCCCCTGCTGCTGTTGTGCCGTCG
TGTGCCAAATCAACACTGGGTCACCCTCATGGCCCCATCTAAGTACCCGG
GTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAG
GATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCCTCAGAATCCTGAA
GCTCCGCCTGGCCTACCACTGCGGGGAAGACATCGATATCATCTTCTTCA
CGTGCTGCATTCTCCACAACATGCTCCACTCCTTCGACGGCATTAGCGTG
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