prot_P-littoralis_Contig1633.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1633.4.1
Unique Nameprot_P-littoralis_Contig1633.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length171
Homology
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A0A6G6D7A3_ECTSI (Photosystem II CP47 reaction center protein n=55 Tax=Phaeophyceae TaxID=2870 RepID=A0A6G6D7A3_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 1.230e-112
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            MAAG+FGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSES AWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP
Sbjct:  204 MAAGSFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESEAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 368          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A8CCR8_9STRA (Photosystem II P680 chlorophyll A apoprotein (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=A8CCR8_9STRA)

HSP 1 Score: 318 bits (814), Expect = 4.490e-107
Identity = 148/165 (89.70%), Postives = 160/165 (96.97%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAGTFG+LAG FHLT+RPPQRLYRALRMGNIETVLSSSI+AVFFAAF+TSGTMWYG ATTPIELFGPTRYQWDSGYFQQEIERRVE SL++GLSES AWS +PDKLAFYDYIGNNPAKGGLFR+GPM+KGDGIAEAWLGHP+FRDREGREL+VRRMPAFFETFP
Sbjct:   84 IAAGTFGILAGVFHLTVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGCATTPIELFGPTRYQWDSGYFQQEIERRVETSLSDGLSESEAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMDKGDGIAEAWLGHPVFRDREGRELTVRRMPAFFETFP 248          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A0A7S2EMF4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EMF4_TRICV)

HSP 1 Score: 312 bits (799), Expect = 6.550e-107
Identity = 145/165 (87.88%), Postives = 158/165 (95.76%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAG FG+ AG FHLT+RPPQRLYRALRMGNIETVLSSSIAAVFFAAF+TSGTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S++EGLSES AWS +PDKLAFYDYIGNNPAKGGLFR+GPMNKGDGIAEAWLGHPIFRD++GREL+VRRMPAFFETFP
Sbjct:    6 IAAGIFGIFAGIFHLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVETSVSEGLSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFP 170          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A8CCS5_ISOGA (Photosystem II P680 chlorophyll A apoprotein (Fragment) n=2 Tax=Prymnesiophyceae TaxID=2608131 RepID=A8CCS5_ISOGA)

HSP 1 Score: 312 bits (800), Expect = 3.430e-105
Identity = 147/165 (89.09%), Postives = 158/165 (95.76%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAG  G+LAG FHLT+RPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYG+ATTPIELFGPTRYQWDSGYFQQEIERRVE SL+EGLS S AWS +PDKLAFYDYIGNNPAKGGLFR+GPMNKGDGIAEAWLGHP+F+D+EGREL+VRRMPAFFETFP
Sbjct:   80 IAAGILGLLAGVFHLTIRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGAATTPIELFGPTRYQWDSGYFQQEIERRVETSLSEGLSLSQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPVFQDKEGRELTVRRMPAFFETFP 244          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A0A7S1TCG8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCG8_9RHOD)

HSP 1 Score: 312 bits (799), Expect = 7.360e-104
Identity = 147/165 (89.09%), Postives = 155/165 (93.94%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAGT G+LAG FHLT+RPPQRLYRALRMGNIETVLSSSIAAVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE S+ EG S   AWS +PDKLAFYDYIGNNPAKGGLFR+GPMNKGDGIAEAWLGHPIF D+EGRELSVRRMPAFFETFP
Sbjct:   90 IAAGTVGILAGAFHLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSITEGASTVEAWSQIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFTDKEGRELSVRRMPAFFETFP 254          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A0A7S2V2W1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W1_9STRA)

HSP 1 Score: 314 bits (805), Expect = 2.740e-103
Identity = 150/165 (90.91%), Postives = 155/165 (93.94%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            MAAGT GVLAG FHL +RPPQRLYRAL MGNIETVLSSSIAAVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE SL   LSE+ AWS +PDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGREL+VRRMPAFFETFP
Sbjct:  203 MAAGTVGVLAGTFHLVVRPPQRLYRALSMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEASLTGNLSENEAWSRIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFP 367          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A0A3G2QYB8_9STRA (Photosystem II CP47 reaction center protein n=14 Tax=Ochrophyta TaxID=2696291 RepID=A0A3G2QYB8_9STRA)

HSP 1 Score: 313 bits (802), Expect = 7.760e-103
Identity = 146/165 (88.48%), Postives = 159/165 (96.36%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAGT G++AG FHLT+RPPQRLYRALRMGNIETVLSSSI+AVF+AAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE S+++ LSE+ AWS +PDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGREL+VRRMPAFFETFP
Sbjct:  203 IAAGTLGIIAGIFHLTVRPPQRLYRALRMGNIETVLSSSISAVFWAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVETSVSQNLSETDAWSQIPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELTVRRMPAFFETFP 367          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: A0A7U0QGP2_OLILU (Photosystem II CP47 reaction center protein n=13 Tax=Ochrophyta TaxID=2696291 RepID=A0A7U0QGP2_OLILU)

HSP 1 Score: 313 bits (801), Expect = 1.070e-102
Identity = 145/165 (87.88%), Postives = 158/165 (95.76%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAGTFG+LAG FH+T+RPPQRLYRALRMGNIETVLSSSI+AVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERR+E SL + +S S AWS +PDKLAFYDYIGNNPAKGGLFR+GPMNKGDGIAEAWLGHPIFRD+EGREL+VRRMPAFFETFP
Sbjct:  202 IAAGTFGILAGVFHITVRPPQRLYRALRMGNIETVLSSSISAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRIETSLEQNVSLSDAWSEIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKEGRELTVRRMPAFFETFP 366          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: PSBB_TRICV (Photosystem II CP47 reaction center protein n=85 Tax=Sar TaxID=2698737 RepID=PSBB_TRICV)

HSP 1 Score: 312 bits (799), Expect = 2.200e-102
Identity = 145/165 (87.88%), Postives = 158/165 (95.76%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAG FG+ AG FHLT+RPPQRLYRALRMGNIETVLSSSIAAVFFAAF+TSGTMWYG+A TPIELFGPTRYQWDSGYFQQEIER+VE S++EGLSES AWS +PDKLAFYDYIGNNPAKGGLFR+GPMNKGDGIAEAWLGHPIFRD++GREL+VRRMPAFFETFP
Sbjct:  203 IAAGIFGIFAGIFHLTVRPPQRLYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPTRYQWDSGYFQQEIERQVETSVSEGLSESQAWSRIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFRDKDGRELTVRRMPAFFETFP 367          
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Match: K9ZW94_9STRA (Photosystem II CP47 reaction center protein n=19 Tax=Eustigmatophyceae TaxID=5747 RepID=K9ZW94_9STRA)

HSP 1 Score: 311 bits (797), Expect = 4.400e-102
Identity = 146/165 (88.48%), Postives = 157/165 (95.15%), Query Frame = 0
Query:    1 MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFITSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAWSSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGRELSVRRMPAFFETFP 165
            +AAGTFG+LAG FH+ +RPPQRLYR LRMGNIETVLSSSIAAVFFAAF+TSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVE S+ EGLS+S AW+ +PDKLAFYDYIGNNPAKGGLFR+GPMNKGDGIAEAWLGHPIF DREGREL+VRRMPAFFETFP
Sbjct:  203 IAAGTFGILAGFFHIIVRPPQRLYRGLRMGNIETVLSSSIAAVFFAAFVTSGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVENSVAEGLSKSQAWARIPDKLAFYDYIGNNPAKGGLFRAGPMNKGDGIAEAWLGHPIFTDREGRELTVRRMPAFFETFP 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1633.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7A3_ECTSI1.230e-11298.79Photosystem II CP47 reaction center protein n=55 T... [more]
A8CCR8_9STRA4.490e-10789.70Photosystem II P680 chlorophyll A apoprotein (Frag... [more]
A0A7S2EMF4_TRICV6.550e-10787.88Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A8CCS5_ISOGA3.430e-10589.09Photosystem II P680 chlorophyll A apoprotein (Frag... [more]
A0A7S1TCG8_9RHOD7.360e-10489.09Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2V2W1_9STRA2.740e-10390.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A3G2QYB8_9STRA7.760e-10388.48Photosystem II CP47 reaction center protein n=14 T... [more]
A0A7U0QGP2_OLILU1.070e-10287.88Photosystem II CP47 reaction center protein n=13 T... [more]
PSBB_TRICV2.200e-10287.88Photosystem II CP47 reaction center protein n=85 T... [more]
K9ZW94_9STRA4.400e-10288.48Photosystem II CP47 reaction center protein n=19 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.680.10Photosystem II CP47 reaction center proteincoord: 70..167
e-value: 2.4E-50
score: 172.4
NoneNo IPR availablePANTHERPTHR33180:SF14PHOTOSYSTEM II CP47 REACTION CENTER PROTEINcoord: 1..166
IPR000932Photosystem antenna protein-likePFAMPF00421PSIIcoord: 2..166
e-value: 2.9E-77
score: 260.5
IPR000932Photosystem antenna protein-likePANTHERPTHR33180PHOTOSYSTEM II CP43 REACTION CENTER PROTEINcoord: 1..166
IPR036001Photosystem antenna protein-like superfamilySUPERFAMILY161077Photosystem II antenna protein-likecoord: 2..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1633contigP-littoralis_Contig1633:5927..6439 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1633.4.1mRNA_P-littoralis_Contig1633.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1633 5496..6439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1633.4.1 ID=prot_P-littoralis_Contig1633.4.1|Name=mRNA_P-littoralis_Contig1633.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=171bp
MAAGTFGVLAGGFHLTLRPPQRLYRALRMGNIETVLSSSIAAVFFAAFIT
SGTMWYGSATTPIELFGPTRYQWDSGYFQQEIERRVEVSLNEGLSESAAW
SSLPDKLAFYDYIGNNPAKGGLFRSGPMNKGDGIAEAWLGHPIFRDREGR
ELSVRRMPAFFETFPTRNCY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000932PS_antenna-like
IPR036001PS_II_antenna-like_sf