mRNA_P-littoralis_Contig1631.4.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A2D7VW08_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D7VW08_9FLAO) HSP 1 Score: 242 bits (617), Expect = 1.870e-77 Identity = 140/206 (67.96%), Postives = 147/206 (71.36%), Query Frame = 3
Query: 87 KGSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREER-CP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGLTD 698
KGSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLK + + SV + F K + Y + E++ P KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGLTD
Sbjct: 30 KGSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKKCEACNGSFIYASNFSVGVNLFFDLNAYAAKLMAPWK-EYTVSVEEIHHTEKKDAPSGTAITIAEGILEHSDKKNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGLTD 234
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A6G6GI51_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GI51_9FLAO) HSP 1 Score: 178 bits (452), Expect = 1.570e-52 Identity = 104/210 (49.52%), Postives = 129/210 (61.43%), Query Frame = 3
Query: 87 KGSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYG-------SVEGVYCFRGRNSSYREERCP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGL 692
KGS FE G SEA VAI+FS+PEAAV NI+KCL+A IP+VSGTTGWLS YE+++K + + S+ + F K SVE ++ + +++ P K W+LD + + I+I AKRE DVKGTH V Y S+IDTISIKHEAHTREGFAKGAILAAEWLVGK GVY+MKDVLG+
Sbjct: 30 KGSSFEDGVFSEADVAIEFSIPEAAVTNISKCLEAGIPVVSGTTGWLSSYEEMIKKCEDCNGSFIYASNFSIGVNLFFNINAYAAKLMAPWKEYDISVEEIHHTQKKDA-------PSGTAITIAEEIIENTHKKEWKLDGGANDEISIIAKREGDVKGTHSVYYTSDIDTISIKHEAHTREGFAKGAILAAEWLVGKQGVYTMKDVLGI 232
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A3E1Q6M5_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A3E1Q6M5_9FLAO) HSP 1 Score: 167 bits (424), Expect = 2.670e-48 Identity = 102/210 (48.57%), Postives = 126/210 (60.00%), Query Frame = 3
Query: 93 SDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYG-------SVEGVYCFRGRNSSYREERCP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGK-TGVYSMKDVLGLT 695
SDFE GTL A AI+FSVPEAAV+NIT+C IP+V GTTGWL +Y+KVLK + SV + F K SVE ++ + +++ P + +NW+LD SE+ I ITAKRE DVKGTH V+Y S IDTISIKHEAHTR+GFAKGAILAAEWL K +GVY+MKDVLG++
Sbjct: 32 SDFEEGTLENADAAIEFSVPEAAVENITRCFKEGIPVVCGTTGWLDDYKKVLKKCEDRNARFIYASNFSVGVNLFFSINDYVAKLMAPWDEYDVSVEEIHHTQKKDA-------PSGTAITIAEGIIKNTGKENWKLDETSEKTIPITAKREGDVKGTHSVEYSSKIDTISIKHEAHTRDGFAKGAILAAEWLAKKESGVYTMKDVLGIS 234
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: UPI001CAA2EA0 (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Marixanthomonas sp. SCSIO 43207 TaxID=2779360 RepID=UPI001CAA2EA0) HSP 1 Score: 161 bits (408), Expect = 6.800e-46 Identity = 99/211 (46.92%), Postives = 125/211 (59.24%), Query Frame = 3
Query: 90 GSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYG-------SVEGVYCFRGRNSSYREERCP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGK-TGVYSMKDVLGLT 695
GSDFE G L EA AI+FS+PEAAV NI KC + +P+V GTTGWL Y+K++KN + + SV + F K SVE ++ + +++ H +D NW+LD VS I I+AKRE DVKGTH V Y S IDTISIKHEAHTR+GFAKGAILAAEWL K +GV++MKDVLG++
Sbjct: 31 GSDFEEGKLKEADAAIEFSIPEAAVKNIEKCFNEGVPVVCGTTGWLDSYKKIIKNCEARNGSFIYASNFSVGVNLFFGINEYVAKVMAPWDEYDVSVEEIHHTQKKDAPSGTAITIAEGIMKHTHKD-------NWKLDEVSPSTIPISAKREGDVKGTHAVTYTSTIDTISIKHEAHTRDGFAKGAILAAEWLSKKESGVFTMKDVLGIS 234
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A6M2ASW6_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=4 Tax=Aequorivita TaxID=153265 RepID=A0A6M2ASW6_9FLAO) HSP 1 Score: 160 bits (405), Expect = 2.030e-45 Identity = 95/197 (48.22%), Postives = 118/197 (59.90%), Query Frame = 3
Query: 108 GTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNV-KHVTEALSMRPTSVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREERCP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGLT 695
G + +A VAI+FS PEAAV NI K L+A++PIVSGTTGWL Y++++K K + SV + F K + ++ P + K W LD+ S+E ++ITAKRE DVKGTH V YESNIDTIS+KHEAH+REGFAKGAILAAEWL K GV+SMKDVLGLT
Sbjct: 37 GNIEDAEVAIEFSSPEAAVSNIKKALEADLPIVSGTTGWLESYDEMVKLCEKRNGSFIYASNFSVGVNLFFSINEYAAKLMAQWKEYDVSVEETHHLEKKDAPSGTAITIAESILKYNSKKEWNLDSTSDEVLSITAKREEDVKGTHIVSYESNIDTISLKHEAHSREGFAKGAILAAEWLKDKKGVFSMKDVLGLT 233
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A2E2WCI9_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2WCI9_9FLAO) HSP 1 Score: 159 bits (403), Expect = 3.620e-45 Identity = 94/203 (46.31%), Postives = 120/203 (59.11%), Query Frame = 3
Query: 87 KGSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREERCP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGL 692
KGSDFE G+L+ A AI+FS+PEAAV NI CLD +IP+VSGTTGWLS Y ++ K + + SV + F K + +++ P + K+W +DTVSE I I AKRE +KGTH V Y S IDTIS+KH+AHTR+GFAKGAILAAEWLV K GV++MK+VLG+
Sbjct: 30 KGSDFEEGSLANAQAAIEFSIPEAAVANIKMCLDNHIPVVSGTTGWLSAYAEMEKLCETRNGSFIYASNFSVGVNLFFSINDYAAKLLAPWKEYSVSIEEIHHTQKKDAPSGTAISIAEGIIKHSDKKSWSMDTVSEATIPIEAKREGTIKGTHTVSYVSEIDTISLKHQAHTRDGFAKGAILAAEWLVNKKGVFTMKNVLGI 232
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: UPI0005530CFC (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Altibacter lentus TaxID=1223410 RepID=UPI0005530CFC) HSP 1 Score: 155 bits (393), Expect = 1.220e-43 Identity = 92/205 (44.88%), Postives = 117/205 (57.07%), Query Frame = 3
Query: 87 KGSDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREERCP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGLTD 698
+ S G L EA AI+FS PEAAV+NIT C NIP+VSGTTGWL Y++VLK + + SV + F K + + +++ P K W+LD E+ ITITAKR DVKGTH V YES +D++S++HEAHTR+GFAKGAILAAEWL GK GV+SMKDVL +T+
Sbjct: 30 QSSSTSEGNLDEADAAIEFSSPEAAVENITNCFKHNIPVVSGTTGWLDRYQEVLKICEDRNASFIYASNFSVGVNLFFSINAYAAKVFAPWKEYIASIEEIHHTQKKDAPSGTAISLAEGMLTHSGKKMWKLDEQKEDAITITAKRIDDVKGTHIVRYESEVDSVSLEHEAHTRDGFAKGAILAAEWLQGKKGVFSMKDVLQITE 234
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A2U0I0H9_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Marixanthomonas spongiae TaxID=2174845 RepID=A0A2U0I0H9_9FLAO) HSP 1 Score: 154 bits (390), Expect = 3.430e-43 Identity = 98/204 (48.04%), Postives = 117/204 (57.35%), Query Frame = 3
Query: 93 SDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPT-SVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREER-CP*WYGDYHC*RDFRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGK-TGVYSMKDVLGLT 695
S+FE GTL +A VAI+FSVPEAAV NIT+ IPIV GTTGWL +Y VL + SV + F K + Y + E++ P +NW+LD S I I+AKRE DVKGTH V Y S IDTISIKHEAHTR+GFAKGAILAAEWLV K +GVY+MKDVLG++
Sbjct: 32 SEFEEGTLKDADVAIEFSVPEAAVKNITRSFSEGIPIVCGTTGWLDDYNNVLNKCEERNAGFIYASNFSVGVNLFFNINAYVAKLMVPWD-EYAVSIEEIHHTEKKDAPSGTAITIAEGIIENTDKENWKLDEGSGNTIPISAKREGDVKGTHSVAYRSTIDTISIKHEAHTRDGFAKGAILAAEWLVKKGSGVYTMKDVLGIS 234
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: A0A2E2J1M7_9FLAO (4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E2J1M7_9FLAO) HSP 1 Score: 154 bits (389), Expect = 4.720e-43 Identity = 96/219 (43.84%), Postives = 122/219 (55.71%), Query Frame = 3
Query: 102 ETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEALSMRPTSVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREERCP*WYGDY--------HC*RD--------------FRTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGL 692
E G+ +A VAI+FS+PEAAV NI +C D IP+V GTTGWL EY+++LKN K R S + +F SV GV F N + + P + DY H + + K+W LD + ++I A RE DVKGTH ++Y SNIDT+SIKHEAH+R+GFA GAILAAEWLV K GV+SMKDVL L
Sbjct: 35 EEGSFDKAHVAIEFSIPEAAVKNINRCFDKGIPVVCGTTGWLKEYDEILKNCKK-------RNGSFIYASNF-----------SV-GVNLFFNLNEYFAQLMEP--WKDYTPSIEEIHHTQKKDAPSGTAITLAEGVLKFSEKKDWSLDPKDSDKLSINALREGDVKGTHSIEYRSNIDTLSIKHEAHSRDGFALGAILAAEWLVDKKGVFSMKDVLNL 232
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Match: UPI00193A15B5 (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Luteirhabdus pelagi TaxID=2792783 RepID=UPI00193A15B5) HSP 1 Score: 153 bits (386), Expect = 1.370e-42 Identity = 96/203 (47.29%), Postives = 121/203 (59.61%), Query Frame = 3
Query: 93 SDFETGTLSEAAVAIDFSVPEAAVDNITKCLDANIPIVSGTTGWLSEYEKVLKNVKHVTEA-LSMRPTSVLE*ISF*FKCVCGKTYGSVEGVYCFRGRNSSYREERCP*WYGDYHC*RDF--RTFR*KNWELDTVSEENITITAKREADVKGTHRVDYESNIDTISIKHEAHTREGFAKGAILAAEWLVGKTGVYSMKDVLGL 692
SD G LSEA AI+FSVPEAAV NITK L+A+IP+VSGTTGWL +YE+V K + L SV + F K E Y + + +++ D + K WEL+ E+ +TI+A RE DVKGTH V Y S IDTIS+KHEAHTR+GFAKGAILAAE++ K G+++MKDVLGL
Sbjct: 32 SDTHEGNLSEADAAIEFSVPEAAVGNITKALEADIPVVSGTTGWLDKYEEVTNFCKKRNGSFLYASNFSVGVNLFFGINEYAAKLMADWE-EYDVSVKEIHHTQKKDAPSGTAISIAEDILKHSKAKKKWELEDEGEDILTISAAREGDVKGTHIVTYSSEIDTISLKHEAHTRDGFAKGAILAAEYIHNKQGIFTMKDVLGL 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1631.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1631.4.1 >prot_P-littoralis_Contig1631.4.1 ID=prot_P-littoralis_Contig1631.4.1|Name=mRNA_P-littoralis_Contig1631.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=63bp MAPWKEYTVSVEEIHHTEKKDAPSGTAITIAEGILEHSDKKTGNSILFPKback to top mRNA from alignment at P-littoralis_Contig1631:3075..3772- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1631.4.1 ID=mRNA_P-littoralis_Contig1631.4.1|Name=mRNA_P-littoralis_Contig1631.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=698bp|location=Sequence derived from alignment at P-littoralis_Contig1631:3075..3772- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1631:3075..3772- >mRNA_P-littoralis_Contig1631.4.1 ID=mRNA_P-littoralis_Contig1631.4.1|Name=mRNA_P-littoralis_Contig1631.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=189bp|location=Sequence derived from alignment at P-littoralis_Contig1631:3075..3772- (Pylaiella littoralis U1_48)back to top |