mRNA_P-littoralis_Contig1631.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A2D8LMG9_9FLAO (Uncharacterized protein n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LMG9_9FLAO) HSP 1 Score: 279 bits (713), Expect = 9.960e-93 Identity = 153/219 (69.86%), Postives = 163/219 (74.43%), Query Frame = 1
Query: 1 MILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRRISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRGKIED-----TIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNFSAEK 642
MILVHPTYFPSIVQMAAIAQ NAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF +L +N + RI S I S++ TP +I+D + +QYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGP+SLNYLETQQLNFSAEK
Sbjct: 1 MILVHPTYFPSIVQMAAIAQTNAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPFFEFYED-----ELVPLFNCEVHG-ILNHNLRIFETLSELIGIEVAVSKTETYEVTP----EIKDLRHLAVAKSKVQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPSSLNYLETQQLNFSAEK 209
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A2E2WE31_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2WE31_9FLAO) HSP 1 Score: 230 bits (587), Expect = 1.460e-73 Identity = 126/219 (57.53%), Postives = 142/219 (64.84%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRRISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRGKIEDTIPTTI------------QYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQL 624
IL+HPTYFPSI+QMA IAQA A+ FE+ DNYQKQTYRNRCYIAHTNG LLLNVP+KHSKDG+RQKM DV+ ENAFPWQKE W+SIQNAYRTSPF A L P +I + I S S K+ + PT+I Q LQPYTQVLEA HGWLPNLSVLDLLFNEGPN+LNYLE+Q+L
Sbjct: 4 ILLHPTYFPSILQMATIAQAKAIVFEIQDNYQKQTYRNRCYIAHTNGKLLLNVPIKHSKDGSRQKMKDVVVENAFPWQKEQWRSIQNAYRTSPFFEYYEDELAPLFL------EPVGTLLDFNLKIYELLAGLIGIETTTSLS-----------KVYEVSPTSIDKRYLANAKTERQTELQPYTQVLEAHHGWLPNLSVLDLLFNEGPNTLNYLESQKL 205
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A6G6GHZ4_9FLAO (WbqC family protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GHZ4_9FLAO) HSP 1 Score: 226 bits (575), Expect = 9.350e-72 Identity = 124/213 (58.22%), Postives = 143/213 (67.14%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRR-ISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRGKIEDTIPTT-IQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNFSA 636
+LVHPTYFPSIVQMAA+AQA AV FEVC NYQKQTYRNRCYIAHTNG LLLNVPVKHSKD TRQKM +V+AENAFPWQKEHW+SIQNAYRTSPF ++ FQ P I + + + S++ +P+ I + I YPL YTQVL A H WLPNLS+LDLLFNEGPN+L YLE+Q L+ A
Sbjct: 4 VLVHPTYFPSIVQMAALAQAEAVVFEVCGNYQKQTYRNRCYIAHTNGKLLLNVPVKHSKDKTRQKMSEVVAENAFPWQKEHWRSIQNAYRTSPFFEFYEDDLAPLFQT-------PVTTILNFNLAIYDVLAEMVGLQVPASKTTTYEVSPNVTDLRNLAIAKSKIVYPLDTYTQVLGAHHEWLPNLSILDLLFNEGPNALLYLESQDLSLLA 209
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A370QFV0_9FLAO (WbqC-like protein n=1 Tax=Marinirhabdus gelatinilytica TaxID=1703343 RepID=A0A370QFV0_9FLAO) HSP 1 Score: 219 bits (558), Expect = 3.330e-69 Identity = 120/210 (57.14%), Postives = 142/210 (67.62%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRRISASFQL*DTWNFRPQPPYFRNTFRINRY*--SSYITNRNLPSES*NQRPTPS-GRGKIEDTIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQL 624
IL+HPTYFPSI QMAAIAQA V FE DNYQKQTYRNRCYIAHTNGTLLLN+P+KHSK G RQK +V+ ENAFPWQKEHW+SIQNAYRTSPF F + F Q F ++ + + I + P+ + + P+ G + TT + L YTQVLEAQHGWLP+LSVLDLLFNEGPN+LNYLE+Q +
Sbjct: 4 ILLHPTYFPSIEQMAAIAQAKNVVFEAQDNYQKQTYRNRCYIAHTNGTLLLNIPIKHSKGGNRQKTKEVVVENAFPWQKEHWRSIQNAYRTSPF--------FEFYEDELHPFFTQKVEKLMDFNLSIFTVLTELIGIESQPTLTESYEKEPNIGDFRFLVDAKTTPKTTLDRYTQVLEAQHGWLPHLSVLDLLFNEGPNTLNYLESQNI 205
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: UPI000DF412C5 (WbqC family protein n=1 Tax=Candidatus Ulvibacter alkanivorans TaxID=2267620 RepID=UPI000DF412C5) HSP 1 Score: 209 bits (533), Expect = 2.200e-65 Identity = 119/217 (54.84%), Postives = 140/217 (64.52%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSP-F*VLRRRISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRGKIEDTIPTTI-----QYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNFSA 636
IL+HPTYFPSIVQMAA+AQANAV FEV DNYQKQTYRNR YIAH+NG LLLNVP+KHSKDGTRQ+ DV+ E AFPWQ +HWKS+Q AYRTSP F ++A F T + RI S I N+P+ T KI D + ++ + PY QV + HG+L NLSVLDLLFNEGPN+LNYLET +LN S
Sbjct: 4 ILIHPTYFPSIVQMAAVAQANAVVFEVHDNYQKQTYRNRAYIAHSNGRLLLNVPIKHSKDGTRQQTKDVVTETAFPWQDQHWKSLQTAYRTSPYFEFYEDELAALFDDRAT-------QLLAHNIRIFEVLSELIE-LNVPTTMSMDYETDP---KITDLRQLAVAKAKKKHSITPYIQVFQEAHGFLHNLSVLDLLFNEGPNTLNYLETLKLNLSV 209
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A7Y2EKF8_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y2EKF8_9FLAO) HSP 1 Score: 206 bits (524), Expect = 4.480e-64 Identity = 113/211 (53.55%), Postives = 138/211 (65.40%), Query Frame = 1
Query: 1 MILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRR-ISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRGKIEDTIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNF 630
MIL+HPTYFP+I QM A+A A+ + FEV DNYQKQTYRNR YIAHTNG LLLNVP+KHSKDG+RQK DV+ E++FPWQ +HWKS+Q AYRTSPF ++ FQ T + F + Y +L SE R +E PT+ + Q YTQVLEA HG+LPNL +LDLLFNEGPN+L+YLE Q+L F
Sbjct: 1 MILLHPTYFPTIAQMTAVANADKITFEVQDNYQKQTYRNRAYIAHTNGQLLLNVPIKHSKDGSRQKTKDVVPEDSFPWQSQHWKSLQTAYRTSPFFEFYEDDLAPLFQNEVTNLLKHNLQIFDLVCDLLGLEVDY----SLSSEYQTNPKERDLRYLVEAKRPTSFTF--QKYTQVLEAHHGFLPNLCILDLLFNEGPNALHYLENQELEF 205
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A2N0EUN7_9FLAO (WbqC-like protein n=1 Tax=Ulvibacter sp. MAR_2010_11 TaxID=1250229 RepID=A0A2N0EUN7_9FLAO) HSP 1 Score: 206 bits (524), Expect = 5.430e-64 Identity = 114/206 (55.34%), Postives = 134/206 (65.05%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRRISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRG-KIEDTIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQ 618
IL+HPTYFPSI QMAAIAQA V FEV DNYQKQTYRNR YIAH+NG+LLLNVPVKH+K+G RQK V+V+AEN FPWQ HWKS+Q+AYRTSPF A +P ++ I I S+S TP + + +Q PY QVLEAQHG+LPNLSVLDLLFNEGPN+L+YLE+Q
Sbjct: 7 ILLHPTYFPSIEQMAAIAQAAHVVFEVQDNYQKQTYRNRAYIAHSNGSLLLNVPVKHNKEGRRQKSVEVLAENNFPWQSHHWKSLQSAYRTSPFFEFYEDDLAPLFT------KPANNLLKHNLAIFELLRELIGLETESSKSETFEVTPQCKDLRFLAIAKREVQSKFTPYIQVLEAQHGFLPNLSVLDLLFNEGPNTLSYLESQ 206
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A167K7T7_9FLAO (Uncharacterized protein n=1 Tax=Cochleicola gelatinilyticus TaxID=1763537 RepID=A0A167K7T7_9FLAO) HSP 1 Score: 202 bits (514), Expect = 1.570e-62 Identity = 109/211 (51.66%), Postives = 138/211 (65.40%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*-VLRRRISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSG-RGKIEDTIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNF 630
+L++P YFP IVQM A+ Q++ + FEV DNYQKQTYRNR YIAHTNG LLLN P+KHSK+G QK DV E AFPW++EHWKSIQNAYRTSPF ++ F+ +++ + F + + Y E PT + R + + T Q LQPYTQV EA HG+LPNLS+LDL+FNEGPN+LNYLE+Q+LNF
Sbjct: 4 VLLYPAYFPCIVQMVAVVQSSNITFEVEDNYQKQTYRNRAYIAHTNGRLLLNAPIKHSKNGRHQKTSDVQFEKAFPWREEHWKSIQNAYRTSPFFEYYEDDLAPLFKQPESFLLKHNFTIFETICELIGFDPIYSKTTVFEKE-----PTYTDLRYLVNAKLKKTFQ--LQPYTQVFEAGHGFLPNLSILDLVFNEGPNTLNYLESQELNF 207
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A3L9YYG8_9FLAO (WbqC-like protein n=1 Tax=Ulvibacter antarcticus TaxID=442714 RepID=A0A3L9YYG8_9FLAO) HSP 1 Score: 201 bits (512), Expect = 3.250e-62 Identity = 108/211 (51.18%), Postives = 134/211 (63.51%), Query Frame = 1
Query: 4 ILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*VLRRR-ISASFQL*DTWNFRPQPPYFRNTFRINRY*SSYITNRNLPSES*NQRPTPSGRG-KIEDTIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNF 630
IL++PTYFPSIVQM A+ +A V FE+ DNYQKQTYRNR YIAH NG LLLN+P+KH+KDG RQK DV+ EN FPWQ HWKS+Q AYRTSPF + F+ P + F+I I S + + TP ++ + ++ ++PYTQVLEA HG+LPNLSVLDLLFNEGPN+LNYLE+Q F
Sbjct: 4 ILLYPTYFPSIVQMIAVVKAEEVVFEINDNYQKQTYRNRTYIAHNNGKLLLNIPIKHTKDGERQKTADVVIENDFPWQLHHWKSLQTAYRTSPFFEFYEDDLMPIFKT-------PASSLLKLNFQIFEMLQELIGFSTDYSNTETYQKTPDFLDLRLLCDVRKAKKFVMEPYTQVLEANHGFLPNLSVLDLLFNEGPNTLNYLESQSFKF 207
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Match: A0A2E2J2Y3_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2J2Y3_9FLAO) HSP 1 Score: 197 bits (501), Expect = 1.370e-60 Identity = 111/232 (47.84%), Postives = 140/232 (60.34%), Query Frame = 1
Query: 1 MILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLLLNVPVKHSKDGTRQKMVDVIAENAFPWQKEHWKSIQNAYRTSPF*---------VLRRRISA----SFQL*DTW--------NFRPQPPYFRNTFRIN-RY*SSYITNRNLPSES*NQRPTPSGRGKIEDTIPTTIQYPLQPYTQVLEAQHGWLPNLSVLDLLFNEGPNSLNYLETQQLNF 630
MIL+HPTYFPSI QM AI Q+ + FEV DNYQKQTYRNR YIAH NG L LN+P++HSK+G RQ+ +V+A+N+FPWQ +HWKS+Q AYRTSPF + + R+S + Q+ DT ++ P YFR + + RY + RN Y L PYTQVLEA HG++ NLSVLDLLFNEGPNSL YLE+Q++ F
Sbjct: 1 MILLHPTYFPSIAQMVAIVQSEGLVFEVFDNYQKQTYRNRTYIAHANGKLALNIPIQHSKNGERQQTKEVVADNSFPWQSQHWKSLQTAYRTSPFFEFYEDDLAPLFQNRVSNLLNHNLQIFDTLCDLLGLEASYSTSPEYFREPKQKDLRYLVAAKKERN---------------------------YKLTPYTQVLEAHHGFISNLSVLDLLFNEGPNSLLYLESQKIAF 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1631.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1631.1.1 >prot_P-littoralis_Contig1631.1.1 ID=prot_P-littoralis_Contig1631.1.1|Name=mRNA_P-littoralis_Contig1631.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=96bp MILVHPTYFPSIVQMAAIAQANAVAFEVCDNYQKQTYRNRCYIAHTNGTLback to top mRNA from alignment at P-littoralis_Contig1631:5..646- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1631.1.1 ID=mRNA_P-littoralis_Contig1631.1.1|Name=mRNA_P-littoralis_Contig1631.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=642bp|location=Sequence derived from alignment at P-littoralis_Contig1631:5..646- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1631:5..646- >mRNA_P-littoralis_Contig1631.1.1 ID=mRNA_P-littoralis_Contig1631.1.1|Name=mRNA_P-littoralis_Contig1631.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=288bp|location=Sequence derived from alignment at P-littoralis_Contig1631:5..646- (Pylaiella littoralis U1_48)back to top |