mRNA_P-littoralis_Contig163.62.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A6H5L2B6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2B6_9PHAE) HSP 1 Score: 431 bits (1107), Expect = 2.420e-143 Identity = 218/261 (83.52%), Postives = 239/261 (91.57%), Query Frame = 1
Query: 241 MME-GLGAESYGSTGGKPPQSENSKLMETAVAGAAMDAAKKEALKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWWSTTRTPEIV 1020
MME G GA+SYG+TGG P QSENSKLM TAVAGAAM+AAK EA KIKNMVLNMR+GPVSIKILSY+AGILLVV+GFFSFFGSFFTLHP+DAVVHLYMFAFGWAIL LEARSSILPKKIV IHKYCAFTTVVWGRGAFF+F+GTL+LAQWVFI I+LGLYL+ IGAGMIYWGQ+AYKNLDALHGEMKNP VVEG+F KFDHN+DGVLDV EMG LLESLGAMMRPTEVEAA II+D DNDGKI+L EFQ WW+ + +PE+V
Sbjct: 1 MMEHGSGADSYGATGGAPQQSENSKLMATAVAGAAMEAAKTEATKIKNMVLNMRDGPVSIKILSYIAGILLVVTGFFSFFGSFFTLHPIDAVVHLYMFAFGWAILLLEARSSILPKKIVHKIHKYCAFTTVVWGRGAFFIFIGTLALAQWVFISIVLGLYLVIIGAGMIYWGQEAYKNLDALHGEMKNPAVVEGMFRKFDHNNDGVLDVTEMGNLLESLGAMMRPTEVEAACIIMDTDNDGKISLAEFQGWWANSPSPEVV 261
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A7S2DI40_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DI40_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.450e-24 Identity = 75/239 (31.38%), Postives = 120/239 (50.21%), Query Frame = 1
Query: 289 PPQSENSKLMETAVAGAAMDAAKKEALKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWV-FIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWWSTT 1002
P ++EN+ ET G A K ++ M +EGP++ K+L + G+ + VSG FG F+ P+ AV+ YM FG I+ +E + P + + + F V+ GRGAF+VFLGTL L QW F +L+G+Y++ G A L+A+ G + + V F D +++G L+ E+ L ++LG+ + E+ A + +D D G + EF WW T
Sbjct: 10 PTETENAGPNETT--GLATAEEKSSSIDPTKMGSWAQEGPLTFKVLCLIGGVCMTVSGVLGLFGVLFS--PLHAVIEGYMCIFGVMIIMMEGSKYLCPINLKETVLREAKFLAVLNGRGAFYVFLGTLLLTQWPNFFDVLIGIYMVXXXXXXXXXGTVAKAKLNAMAGHLTDENSVNEAFKAVDVDNNGALNYDELAVLCQNLGSKLTKEELAACIQDLDKDGSGVVEYTEFFDWWKKT 244
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A835YVM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM7_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.560e-21 Identity = 64/215 (29.77%), Postives = 108/215 (50.23%), Query Frame = 1
Query: 349 AAKKEALKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWW 993
AA E K+ ++G V +++ + GI ++ G FG L+ + A+ +Y+ FG I+ LE R ++++ F T+VWGRG F++++G+L W +LLG IG MI +G+ A L + G+ + F FD N L+ AE+ L +GA++ E+E A++++D + +GKI +EF AWW
Sbjct: 39 AAPTETSKLMTHTKVFKDGNVHLRLAAVFMGIWMLGLGLVYAFGESLRLNCLTAMYRMYLAFFGAFIIALETRGPFNYLLRTWRVYEFARFLTLVWGRGIFYLYVGSLCFQVWDLPGVLLGSATCLIGLCMIVYGRSATVKLQYMQGQFTTEKDLRRAFDAFDVNRSAALEPAELAALCREMGALLTRAELETALLMLDRNANGKIEFDEFAAWW 253
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A0L0FU12_9EUKA (EF-hand domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FU12_9EUKA) HSP 1 Score: 103 bits (256), Expect = 1.980e-21 Identity = 63/193 (32.64%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 448 LVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVI-----------IIDADNDGKITLEEFQAWW 993
++ FF + + L P+ V++ Y FG+ IL LE +PK V + F T + GR F++F+GTL LAQW ++ ++ G LI G M+ G A K L++L EM +P V F+ D + +G LD E+ L SLG ++ E+E A++ ++D+++DG ++ EEF WW
Sbjct: 1 MIFVSFFEIWINLIRLSPITMVIYAYCVFFGFVILALEVSPRFMPKSWVVAVRTNALFLTRLHGRAFFYIFVGTLMLAQWHWMQMMSGGLLIFTGIVMMISGGVANKKLNSLKREMTDPQEVRENFYAHDLDGNGALDTKEVAALCASLGTVLSRVELERALMCPSNNSLTFQQLLDSNHDGMVSYEEFYNWW 193
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A7S1YV34_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YV34_TRICV) HSP 1 Score: 96.7 bits (239), Expect = 1.990e-18 Identity = 64/227 (28.19%), Postives = 110/227 (48.46%), Query Frame = 1
Query: 325 AVAGAAMDAAKKEALKIKNMVLNM-REGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARS---SILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWW 993
AVA + A K + + V M EGP+S K+++++AGIL++ + F ++P VV Y+ + ++ LE R I+ KK IH F V GRGAF+ F G L W F+ ++ G ++ IG+ + G+ L L + + ++ +F + D + DG + V + L+ +L E AA +D D+ GK++ ++F+ WW
Sbjct: 35 AVAASVARGAVKHTIATASRVRTMAEEGPLSFKVMAFLAGILMIATSVLDFLNGLLHINPTHVVVAAYVCGSAFVMIILEGRGFIPEIVIKKFQDPIHDNAKFLRYVSGRGAFYFFAGLLQFGHWSFLNMISGGVVMFIGSLFVVVGRSTAPKLGELRAAIGDESHLQVLFVENDRDKDGFMTVEDFEGLVGTLDLNFSRNECLAAFDAMDGDDKGKVSYDDFKVWW 261
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A7S1XLD5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLD5_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.210e-17 Identity = 73/252 (28.97%), Postives = 117/252 (46.43%), Query Frame = 1
Query: 352 AKKEALKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMF-----------AFGWAIL--FLEARSSILPKKI-------------VANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLG-LYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWWSTTRTPEIVLK 1026
A + A + ++ ++ G ++K L+ A +L+VV G +FF S + P+ A++ +Y+F A GW L F EA P++ F + GRGAF++F GTL +AQW +Y G ++I +G M+ G+ A ++ + + + F K+D + DG L E+ L E LG+ M E+EAA+ ++D D G I EEF+AWW V K
Sbjct: 66 ASEAAARFADLKKSLTSGSAAMKALATGAALLMVVDGVMAFF-SLLSFSPLRALIEVYIFIAGVVSLAIEGALGWKRLKDFEEAIQVPSPRQPHPTRPDPTRIRCPTPTRQAKAPFLYYLSGRGAFYIFFGTLMVAQWPSLYDFAGGAFVIFVGVSMLASGRAAAGKMERFRDSIVDERGLRSEFSKYDVSRDGKLQPTELAALCEGLGSTMSHKELEAAMFMLDTDRSGTIEFEEFKAWWHREGEMAFVAK 316
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A6S8STF0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8STF0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 6.240e-17 Identity = 55/212 (25.94%), Postives = 104/212 (49.06%), Query Frame = 1
Query: 367 LKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSI---LPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWW 993
+K M L + +GP I+ L + GI ++VS + F +A++ +Y FG I E + + + + A ++ + VWGRG F G + +AQW + G+Y++ +G + G++ L L + + + IF++ D +G LD + L E +G + ++E + + +D+D +GK++L+EF+AWW
Sbjct: 112 IKASRMKLTVEKGPTYIRFLGIIGGICMIVSSVIDWVHVAFHKDITEALLSVYACLFGLLICITEEKDVVPDYVGRMTRARLYHHLNLLKYVWGRGILFCCGGAIQIAQWTVLSRYCGIYMMVLGLVTFFHGRKTTTELYHLRESISDEAQLIQIFNENDSRGEGYLDRGDFSNLSEQIGLELTSEQLEESFVSMDSDKNGKLSLDEFRAWW 323
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A7S2XB37_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB37_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 1.480e-14 Identity = 60/197 (30.46%), Postives = 100/197 (50.76%), Query Frame = 1
Query: 421 ILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIGAGMIYWGQQAYKNLDALHGEM--KNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWWSTTR 1005
+L +A +L V GFFS F V+ Y+ FG+ + ++ + + + I K T +WG+G F++F+GTL L QW I I++G Y++ +G MI Q+ + L +L ++ + + VE F K+D + +G + AE L + E++AA I+D D +GKI EF+ W +T R
Sbjct: 39 LLGGLATLLCAVLGFFSTLTRF--------PVYCYVIGFGFISVVMDISQFMCTAGMKSWIEKEFKILTRLWGKGIFYIFIGTLLLWQWGLIPIIVGSYMMLVGILMILISFQSGRKLGSLRQKLVAQTDMEVEEAFKKYDKDGNGWISDAEFKDLAREHEISLNANEMDAAKNILDTDRNGKIDKNEFRVWLTTER 227
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: F0YBA6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBA6_AURAN) HSP 1 Score: 85.9 bits (211), Expect = 2.200e-13 Identity = 72/238 (30.25%), Postives = 116/238 (48.74%), Query Frame = 1
Query: 322 TAVAGAAMDAAKKEALKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSS---ILPKKIVANIHKY-------CAFTTVVWGRGAFFVFLGTLSLAQ---WVFIYILLGLYLIGIGAGMIYWGQQAYKNL-DALHGEMKNPVVVEGIFHKFDHNHDGVLDVAEMGKLLESLGAMMRPTEVEAAVIIIDADNDGKITLEEFQAWW 993
+AVA + ++A ++K V+N G V + L + +L VV + G+ L P AV+ +Y F G A+L LE + P +A + ++ T + GR +VF+G+L LA W + L+G Y + +G M+Y + A L D L G + ++ + F D + DG L +E+G L + GA + P EVE+A+ I+D D G + EEF AW+
Sbjct: 16 SAVAASIGAQVSQQAQELKRSVVN---GSVELSTLGSIGAVLSVVVSCLNVLGNIVKLSPTRAVLMVYCFGGGLALLALEGMHNAPPFAPPSALAFLRRWKLKLRTEAHVLTTLTGRSLGYVFVGSLLLADGGSW--LGALVGFYCVFVGGAMLYVARSAVAKLRDLLPGASEEELLAQ--FDAHDADRDGKLAGSELGALCAACGAALAPREVESALRILDTDGSGLVDREEFVAWF 246
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Match: A0A7S2P3X7_BIGNA (Hypothetical protein (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2P3X7_BIGNA) HSP 1 Score: 76.3 bits (186), Expect = 1.420e-12 Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 328 VAGAAMDAAKKEALKIKNMVLNMREGPVSIKILSYVAGILLVVSGFFSFFGSFFTLHPVDAVVHLYMFAFGWAILFLEARSSILPKKIVANIHKYCAFTTVVWGRGAFFVFLGTLSLAQWVFIYILLGLYLIGIG 732
V AAM A KEA K+ N V NM G + L ++ G+L + SF G L+P+ VV Y F FG AI +E ++ LP ++ + ++ F T + GRG F+V++G+LS+A+ F+ +G Y++G+G
Sbjct: 2 VGDAAMKKASKEASKLGNQVKNMERG---LGCLGFIGGVLTAGA---SFLGMMNILNPLGFVVEAYTFLFGIAIALIEMQNQCLP---LSFLERWARFMTTLGGRGVFYVYVGSLSIAKSTFLSFAVGAYMMGVG 127 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig163.62.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig163.62.2 >prot_P-littoralis_Contig163.62.2 ID=prot_P-littoralis_Contig163.62.2|Name=mRNA_P-littoralis_Contig163.62.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=278bp MMEGLGAESYGSTGGKPPQSENSKLMETAVAGAAMDAAKKEALKIKNMVLback to top mRNA from alignment at P-littoralis_Contig163:433397..444460+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig163.62.2 ID=mRNA_P-littoralis_Contig163.62.2|Name=mRNA_P-littoralis_Contig163.62.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11064bp|location=Sequence derived from alignment at P-littoralis_Contig163:433397..444460+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig163:433397..444460+ >mRNA_P-littoralis_Contig163.62.2 ID=mRNA_P-littoralis_Contig163.62.2|Name=mRNA_P-littoralis_Contig163.62.2|organism=Pylaiella littoralis U1_48|type=CDS|length=834bp|location=Sequence derived from alignment at P-littoralis_Contig163:433397..444460+ (Pylaiella littoralis U1_48)back to top |