prot_P-littoralis_Contig163.59.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig163.59.3
Unique Nameprot_P-littoralis_Contig163.59.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length538
Homology
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BLAST of mRNA_P-littoralis_Contig163.59.3 vs. uniprot
Match: D7FNB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB8_ECTSI)

HSP 1 Score: 613 bits (1580), Expect = 2.740e-214
Identity = 351/535 (65.61%), Postives = 407/535 (76.07%), Query Frame = 0 
Query:   16 MGKGKRKGSAGSSSGDGRNGDQKTLRSAVEKAVNEAVNLQDSASDLPALQAAAALESAAQRYREALTRLPGHAEAGYNLATCLSEQADLKL--DSREQVSLLRESRAVLESVIEADTSGRGGTTALAHHALGNVIRSLVEVFRDHCPTAPCADCCVGCPSTAECKEQSSQACRHLEASVSIIKNLQNQSGGTEEVLIHWGDAFASMMQMVMDEGSAGRSTSDHLPPS----DTVQEALELCSNACSKYSEALALDTSSGGSDTDVLRLKAGSLMNFLDWALPE-IPKQPPNG---VGFSPEVLLVTGEQTVGMLLGLDDNNVGGLLAKGDLCRLRARVSMLTGAGMQEEGARREESVAWFERAVGGYPQDAEALTTAGEGLLEHGRRTMAVYREVAWPAQG----GYGSTVAPA-PHVERLRMSAVTWLQDAGNLLSSACAIDTSDTDLPYNAACAFALSGDHTSCFRALSEFCRRLTLTLTIAAAASSGGVSSSKRDAARWSLREVEDDVDLESVREAGWFIDLLRGTNATLVG 535
            MGKGK+K + G++SG G  GDQK +R+AVE  VN+AV LQDSASDLPA QA AAL++AA +YREAL RLP HAEA YNLATCLSEQAD  L  D REQ++LL ESR++LESVIEADTSGRG TTALAHHALGNVI ++VE F D  PT  CAD  V CPS A  KE  S ACRH EASVSI K LQNQSG  EEVLIHWGDA +SMMQ+VMD+G+                  VQE L LCSNACSKYSEALA +TSSGGSDTD+LRLKAG+++NFLDWALPE +P + P G   VGF  E +L  GE+ V  LL LDD+++ G+LAK DLCRLRAR SML+GA ++EEGARREESVAWF RA  G+PQDA  LT AGEGLLE+GRR+MA+Y+EVA  + G    GYGS   PA PHVE +RMSA+T LQ+AG LL+ AC+ D SD + PYNAACAFAL+GD  SCFRALSE+CRRLTL       A++G  SS KR+AAR SLRE  +DVDLE VR A WF+DLLRGT+ATLVG
Sbjct:    1 MGKGKKK-AGGAASGAGGVGDQKAVRAAVETIVNDAVKLQDSASDLPAPQALAALQAAAAKYREALARLPRHAEAAYNLATCLSEQADSDLNPDMREQMALLSESRSLLESVIEADTSGRGATTALAHHALGNVICAVVEAFEDQRPTVQCADGSVECPSAAARKEHLSLACRHFEASVSITKRLQNQSGEAEEVLIHWGDALSSMMQIVMDDGATXXXXXXXXXXXXXXXSLVQEVLGLCSNACSKYSEALASETSSGGSDTDILRLKAGTVVNFLDWALPEALPPEAPIGGSDVGFPAEEILAAGEEAVQALLALDDSSMDGMLAKADLCRLRARTSMLSGASVEEEGARREESVAWFARAATGFPQDAGVLTAAGEGLLEYGRRSMALYQEVAVGSVGQSPYGYGSAPGPAAPHVEGMRMSAITRLQEAGRLLAEACSFDVSDANSPYNAACAFALAGDPGSCFRALSEYCRRLTL-------AANG--SSGKREAARRSLREAGNDVDLEEVRGAPWFVDLLRGTDATLVG 525
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig163.59.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNB8_ECTSI2.740e-21465.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 35..488
e-value: 9.2E-10
score: 39.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 69..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig163contigP-littoralis_Contig163:419384..430725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig163.59.3mRNA_P-littoralis_Contig163.59.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig163 418124..430757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig163.59.3 ID=prot_P-littoralis_Contig163.59.3|Name=mRNA_P-littoralis_Contig163.59.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=538bp
MTHRQFASLSSTKHTMGKGKRKGSAGSSSGDGRNGDQKTLRSAVEKAVNE
AVNLQDSASDLPALQAAAALESAAQRYREALTRLPGHAEAGYNLATCLSE
QADLKLDSREQVSLLRESRAVLESVIEADTSGRGGTTALAHHALGNVIRS
LVEVFRDHCPTAPCADCCVGCPSTAECKEQSSQACRHLEASVSIIKNLQN
QSGGTEEVLIHWGDAFASMMQMVMDEGSAGRSTSDHLPPSDTVQEALELC
SNACSKYSEALALDTSSGGSDTDVLRLKAGSLMNFLDWALPEIPKQPPNG
VGFSPEVLLVTGEQTVGMLLGLDDNNVGGLLAKGDLCRLRARVSMLTGAG
MQEEGARREESVAWFERAVGGYPQDAEALTTAGEGLLEHGRRTMAVYREV
AWPAQGGYGSTVAPAPHVERLRMSAVTWLQDAGNLLSSACAIDTSDTDLP
YNAACAFALSGDHTSCFRALSEFCRRLTLTLTIAAAASSGGVSSSKRDAA
RWSLREVEDDVDLESVREAGWFIDLLRGTNATLVGGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf