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Homology
BLAST of mRNA_P-littoralis_Contig163.59.3 vs. uniprot
Match: D7FNB8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB8_ECTSI) HSP 1 Score: 613 bits (1582), Expect = 5.670e-209 Identity = 351/535 (65.61%), Postives = 407/535 (76.07%), Query Frame = 3
Query: 78 MGKGKRKGSAGSSSGDGRNGDQKTLRSAVEKAVNEAVNLQDSASDLPALQAAAALESAAQRYREALTRLPGHAEAGYNLATCLSEQADLKL--DSREQVSLLRESRAVLESVIEADTSGRGGTTALAHHALGNVIRSLVEVFRDHCPTAPCADCCVGCPSTAECKEQSSQACRHLEASVSIIKNLQNQSGGTEEVLIHWGDAFASMMQMVMDEGSAGRSTSDHLPPS----DTVQEALELCSNACSKYSEALALDTSSGGSDTDVLRLKAGSLMNFLDWALPE-IPKQPPNG---VGFSPEVLLVTGEQTVGMLLGLDDNNVGGLLAKGDLCRLRARVSMLTGAGMQEEGARREESVAWFERAVGGYPQDAEALTTAGEGLLEHGRRTMAVYREVAWPAQG----GYGSTVAPA-PHVERLRMSAVTWLQDAGNLLSSACAIDTSDTDLPYNAACAFALSGDHTSCFRALSEFCRRLTLTLTIAAAASSGGVSSSKRDAARWSLREVEDDVDLESVREAGWFIDLLRGTNATLVG 1637
MGKGK+K + G++SG G GDQK +R+AVE VN+AV LQDSASDLPA QA AAL++AA +YREAL RLP HAEA YNLATCLSEQAD L D REQ++LL ESR++LESVIEADTSGRG TTALAHHALGNVI ++VE F D PT CAD V CPS A KE S ACRH EASVSI K LQNQSG EEVLIHWGDA +SMMQ+VMD+G+ VQE L LCSNACSKYSEALA +TSSGGSDTD+LRLKAG+++NFLDWALPE +P + P G VGF E +L GE+ V LL LDD+++ G+LAK DLCRLRAR SML+GA ++EEGARREESVAWF RA G+PQDA LT AGEGLLE+GRR+MA+Y+EVA + G GYGS PA PHVE +RMSA+T LQ+AG LL+ AC+ D SD + PYNAACAFAL+GD SCFRALSE+CRRLTL A++G SS KR+AAR SLRE +DVDLE VR A WF+DLLRGT+ATLVG
Sbjct: 1 MGKGKKK-AGGAASGAGGVGDQKAVRAAVETIVNDAVKLQDSASDLPAPQALAALQAAAAKYREALARLPRHAEAAYNLATCLSEQADSDLNPDMREQMALLSESRSLLESVIEADTSGRGATTALAHHALGNVICAVVEAFEDQRPTVQCADGSVECPSAAARKEHLSLACRHFEASVSITKRLQNQSGEAEEVLIHWGDALSSMMQIVMDDGATXXXXXXXXXXXXXXXSLVQEVLGLCSNACSKYSEALASETSSGGSDTDILRLKAGTVVNFLDWALPEALPPEAPIGGSDVGFPAEEILAAGEEAVQALLALDDSSMDGMLAKADLCRLRARTSMLSGASVEEEGARREESVAWFARAATGFPQDAGVLTAAGEGLLEYGRRSMALYQEVAVGSVGQSPYGYGSAPGPAAPHVEGMRMSAITRLQEAGRLLAEACSFDVSDANSPYNAACAFALAGDPGSCFRALSEYCRRLTL-------AANG--SSGKREAARRSLREAGNDVDLEEVRGAPWFVDLLRGTDATLVG 525
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2749 |
| Hectar predicted targeting category | other localisation |
| Exons | 12 |
| Ec32 ortholog description | Tetratricopeptide-like helical domain |
| Ec32 ortholog | Ec-24_000190.1 |
| Cds size | 1614 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789789.144571-UTR-P-littoralis_Contig163:418123..418321 | 1680789789.144571-UTR-P-littoralis_Contig163:418123..418321 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig163 418124..418321 - |
| 1680789789.1540444-UTR-P-littoralis_Contig163:418478..419383 | 1680789789.1540444-UTR-P-littoralis_Contig163:418478..419383 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig163 418479..419383 - |
| 1680789789.2883182-UTR-P-littoralis_Contig163:430725..430757 | 1680789789.2883182-UTR-P-littoralis_Contig163:430725..430757 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig163 430726..430757 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789789.1635284-CDS-P-littoralis_Contig163:419383..419707 | 1680789789.1635284-CDS-P-littoralis_Contig163:419383..419707 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 419384..419707 - |
| 1680789789.1846535-CDS-P-littoralis_Contig163:420026..420144 | 1680789789.1846535-CDS-P-littoralis_Contig163:420026..420144 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 420027..420144 - |
| 1680789789.198427-CDS-P-littoralis_Contig163:420777..420936 | 1680789789.198427-CDS-P-littoralis_Contig163:420777..420936 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 420778..420936 - |
| 1680789789.20902-CDS-P-littoralis_Contig163:421258..421373 | 1680789789.20902-CDS-P-littoralis_Contig163:421258..421373 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 421259..421373 - |
| 1680789789.220908-CDS-P-littoralis_Contig163:422042..422172 | 1680789789.220908-CDS-P-littoralis_Contig163:422042..422172 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 422043..422172 - |
| 1680789789.2314403-CDS-P-littoralis_Contig163:422668..422783 | 1680789789.2314403-CDS-P-littoralis_Contig163:422668..422783 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 422669..422783 - |
| 1680789789.2401981-CDS-P-littoralis_Contig163:424001..424097 | 1680789789.2401981-CDS-P-littoralis_Contig163:424001..424097 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 424002..424097 - |
| 1680789789.2515774-CDS-P-littoralis_Contig163:424872..424996 | 1680789789.2515774-CDS-P-littoralis_Contig163:424872..424996 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 424873..424996 - |
| 1680789789.2622056-CDS-P-littoralis_Contig163:425319..425419 | 1680789789.2622056-CDS-P-littoralis_Contig163:425319..425419 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 425320..425419 - |
| 1680789789.2721777-CDS-P-littoralis_Contig163:425724..425892 | 1680789789.2721777-CDS-P-littoralis_Contig163:425724..425892 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 425725..425892 - |
| 1680789789.2800696-CDS-P-littoralis_Contig163:430560..430725 | 1680789789.2800696-CDS-P-littoralis_Contig163:430560..430725 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig163 430561..430725 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig163.59.3 >prot_P-littoralis_Contig163.59.3 ID=prot_P-littoralis_Contig163.59.3|Name=mRNA_P-littoralis_Contig163.59.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=538bp
MTHRQFASLSSTKHTMGKGKRKGSAGSSSGDGRNGDQKTLRSAVEKAVNE
AVNLQDSASDLPALQAAAALESAAQRYREALTRLPGHAEAGYNLATCLSE
QADLKLDSREQVSLLRESRAVLESVIEADTSGRGGTTALAHHALGNVIRS
LVEVFRDHCPTAPCADCCVGCPSTAECKEQSSQACRHLEASVSIIKNLQN
QSGGTEEVLIHWGDAFASMMQMVMDEGSAGRSTSDHLPPSDTVQEALELC
SNACSKYSEALALDTSSGGSDTDVLRLKAGSLMNFLDWALPEIPKQPPNG
VGFSPEVLLVTGEQTVGMLLGLDDNNVGGLLAKGDLCRLRARVSMLTGAG
MQEEGARREESVAWFERAVGGYPQDAEALTTAGEGLLEHGRRTMAVYREV
AWPAQGGYGSTVAPAPHVERLRMSAVTWLQDAGNLLSSACAIDTSDTDLP
YNAACAFALSGDHTSCFRALSEFCRRLTLTLTIAAAASSGGVSSSKRDAA
RWSLREVEDDVDLESVREAGWFIDLLRGTNATLVGGP* back to topmRNA from alignment at P-littoralis_Contig163:418124..430757- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig163.59.3 ID=mRNA_P-littoralis_Contig163.59.3|Name=mRNA_P-littoralis_Contig163.59.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=12634bp|location=Sequence derived from alignment at P-littoralis_Contig163:418124..430757- (Pylaiella littoralis U1_48)
CTGTGTGTCGGTGTGTGCGGCGACTTCATGTGATGACACATCGCCAGTTC
GCGAGTCTCTCCTCCACCAAGCACACCATGGGGAAGGGCAAGAGGAAAGG
TTCTGCCGGCTCTTCATCGGGAGATGGGCGCAACGGTGACCAAAAAACCC
TTCGCTCGGCTGTAGAAAAAGCCGTCAACGAGGCGGTCAACTTACAGGTG
TGTGTGCCTTTTGTCTCGGGTTCGTTTGAACACTTGAATCTCCACTCTGC
ACTGACTTTGGATCGTACAGCAATATTTACTTCGTTCAACTATAGCATAT
TAATGCTAAAATATACGATCGATGCATCCGTGACACCATTGCGACGCACA
ACCACCTTGTTCTTCAAAGTACAAGTACTAGGTTTTCAGGCACCAAATCG
TGAAGGTGCCATCATTGCTGGGTATCATTTCGAGTTGATTACCACACTTC
GCAATATCTCACCCCCCCCCGCTGTCGATTCTCGATCTTTCTGTGGACGG
AGCCCGATTGTGGTCCCATGTACAGGTAGTTTCTCCGCAATAAAGCTGGT
ACCTGGTTATACCAACCAGGTTTATCGGCGGAATTCTCTTCAGCAATACT
CGTAGTTTCTCCGCAATGAAGCGGGTACCAACCAAGTCCATCGGCGAAAT
TCTCTTGTCTACAGTATAGTAGCAGATGTGAGGACCCATGTTCACGGTAA
AGTGTGTGTGTGTCTGTGTGTGTGTCCATCCCATTCTTCTGAGCACCAGT
TCGTGAGTAAACAAACTTCGAAGTGTCGACGAGGGAAAGGGATCGCTGTA
CCCTTTCTCGCGATAAAACAATAAGGCAAGTACCGCAGTGGGAAGTAGAG
AAACAAAAAAAAAATCCTGTGTTGACTTCCTACTGCTGTGTGACCCTGGT
TGGAGCGTCTACCTACCCGAAAGAAGTGTGGAGTGGCGTCCAATTTGATG
ACAACACACAACACACACACACCAGTCTACACCTTGTATAAAGTGGGTGC
ATCAGCCGAGATCACACTAAAGGAAGATCACACGCGAGCCTTTTCACTTT
TTATTTTGTTTTGTTGCCGAAACCTTCCTCCTGCGGTACGTGCCTATGGC
GAGGCGGGTACAGCAATCCCTTCCGTATGTTTACTCACGAGTAATTCGCT
TTCCACTGCAGTAAAGTCGCAAGAAACGCTCTCAGAGAGAATCGAACTTG
CGACCTTACAACTAATTGTCAACGAGGGAACCACTACAGACCACCGCGGC
GACCGGTACAAGAGTGTATCAGAAAAATAACGAAATTGCGAAGACGAAAA
CGGAATTCCATACAGCAGCATGATATGTAGGTATATACTGACCAGTCGGA
GCAGGAATGGATCAAGCCTGTTTTCGTGTTGTCATCCGAGGAGGAAGATG
AAATAGGTGTGTTTTCCTCGAGGCGCCTTTTCGAGTAAGTGTCCGGATAC
AGACAAGTACCTGTTATTTTGCGAAAACCAAAAACGGAATCGACATGGAA
GGCTTGTCGGCGGGGACGCTTCAGCTCTGCACGGCATCTCCGGTTGACTG
TTGAGCACAGCAGACAAGTGCACGTGTTGACCGGCATCTCGCCACAGGGG
ACGACATTCCCTGCAAACTGCATAGCTATTTGGGATTGGTTTAGCGCCAA
TTAGGAACGCCCGAGGTGTGGGGCTGTGGGGTGTCAAGCGGGACGGGAAA
ACCGTTGACAACCTACCCGCAACAACTCGCTCGTTCTCTGAGCTGCTTTT
CGGGTGAGTTTTGAAAGGAGCCACGTTCACGTTCTCACCGATGGCTCGCC
AGAAAAACGGACGAGGTTCCCTCGAGCGATGGGTCTACTACTCTGTCCAT
CGGGAACGTCCAAGGTTTGGAGCAGAGCTGTGTCAAACGTGTCGGGAAAT
AAGTTATCAGTCATTCCGCTGAAAATTCTATCAATCAAGGAGTCGATTTA
CTTGTTTTCCGACGCGTGTGACGCGGCACTGCTCCGAACTTTGTCTTTGC
AATGTTTTGTGTGCCCCGTTAACTATGCGCTTGTGCGAAATCGAAGAAAT
TGTTTTCACCCCATCGCATGGAAGGCTATTGCTTGCACCCGTGTCACAAG
CGACCTGTACTTCGAGCTCAAGACACGTGCTGCTCGGCTCGCGGGGTCAA
ACCGGATGAGTAGCATGCTCTCGTGCGTTTCAATCTCGATGCCATGACGA
CTTGAAATAACGCCATTTGACATAAAAATTATGATGTCCTCTCCGGGAGA
ACGTGATTTTATCGAAGTTCAGTTTCGTGTGCAGGAACTGTAAATCGATC
GATTGTACTGTAGCATCTCGTAGATAACCACAGGTGCGCGATACTCACTC
AATTGTCCACGCCTGCCCTTTGTTAGCCGGCTCTGCACGAAGTGGCGCGA
AAGGGCTGTCCCGCAAACATCAAATCCAAGTCAACTTTTCGACCGATGCC
GGGGAAATCGTCCGCCGTAAGCGCTTAGGTTATTCGAAAGATACTCTACA
ACGAGGCGAGAATTTCACACGGTGCAGGAATAAACAAACAATTCGTGCGT
CTACGCGAATAGTCGCTCCCGCTTCCTCTTCCCTGCTCTTCCTTGTTTGA
AAACAACGCACCGACTCCTGTGAGAAAACAAAGCAGCACCGGCTCTTCTG
CTCTTGTCTTCCTACTCTCTCCTCTTTTATTTCGTTGTTTTGAAAAACAA
GTAGACTACACGAGGAGTGCGCCCCCTTCGCGGTACCACGGTTCCTAGCA
GCAAGCAAAAATTGCGCAATACAGCAACACATAATAGACCAGGGTGGTAC
TCATTGACTCACGCAGCGCCCAGCGTACGCCCCCCCCCCCAAGTATATGG
AGCACATGAGGAGAGTCGCAGCAACTTCGACAGGAATGCCGTCCTTTCCA
TGGCTAGTGAACATAAGTATGGCTGCCCTCATGCAATGCCCGCCCGGGTG
CACTGGTTCCCAACTCTGACGGTACACAAATCCGTGGAGGTGTTGCGATG
TATGCACGGTCTGACGGTACGCGCGAGATAGCAGTATCCGACGTCGTGCC
CGGCGCATTTTCCAGCTTGTCCAACCCCCCCTACATGGCCGTGAACAGGA
GAGGCGGAAATGAATGAGGGAATATCTGTCAAAGAATGAGCGGAAGGAAA
GCAGTAACATAGCTCAACGATTCCTTGCCACGTGGTGCGGTACAAGCAAA
TTTCAGAGTCTCCTCATCGTAATATTTCCGTGTTCGTGGGCAACAGCTAG
ATTTCTCGGTCGAGGGGTGGTCGGGGGGGGGGTGACTGGTGGTACAAGAC
GACGGCACCTGTTCTGCAAACCACTTATTGCACAGGGTATGAGCAGGGAG
CCGCACTTTACATCGAACAAAGCACCTGCACATCCACAATACGATATGAC
GTCGATACATGTCTCGGTATTGTTTGCGACATGCAAACAAGCTTGGTGTC
TGACTCTACTCCGTGTACGTTACACACAACAGCATCGGATATAAATAATT
GTCCTTTGTATCTGGTACGGCAATATCTACAAGGCTATCATGAAAATAAC
TCAACTTTCAGCAGCATAGCAGCAGTTTAACGAGCAAATTCCAAGCGAGA
CAAACAAGATATAATGGAAAATCATGTCCTGGTATTTTGCTTGCGTCACT
GAAAAAGGCTTGGTATCTGACTCTAACCGGTACGAGGTGCGTAGCAGCAG
GTGCAGAACATGCAGCAGATCACGTTCAAACCCAAAGCAGAACTCTCTAC
TACTTGGCATATCTGTGAGCACACACCAAAGAAGTGATGCCTACGGCTCA
GCTAGCTTCGGTGCCGACGGCATTGCCACGGCCTTACGGGGGCGTTCTTC
CAACTCGTCAGAGCGGAGTATCTCAAGTACGTGCAGAGGAGGCTCTTTCC
CCTGGTTTAAGCTCGAGGAAAGTACCCACTTCCTTTGGGTTTTCCTCCAC
AGCAGTGACTGCAAGGCCAGCATGCTCCTCGGCGGCAGCAGCGAAACTTT
GGCAGTGGTGATTGTAGATCCGGCGGTGGCAGCGAGAGTGTGCTCGCCGC
AGTTTCGGATATCTGCAAGGGAAAAATCTTCGCACATCCACCTACACCGA
AGACAGTTCCCTCGACCCCGGCATGAACCTGCTTTAACCTGTGCTGGACT
CCATGGTATCGCTTACTTGTTTTTGGAATCGCAAGCATACGGATTGCTCC
ACAGTGTTCATGCTACGAAAGCGGATTTGGCAGCTGTCGTCGTCAGCCGT
GTCCTTTATTTAGAAACGCCTCGAAAACTCGACGAGCCGGCAGCAGTGTC
GTAAAAAAAAAGGACGTCAAATTTTCTCTTAAAAAAATAACCCTATTTAG
AAATGCCTAAACTAATTCGACCCAGAAGGCCCCGTGTTCCATGGACGGCG
CTGTTTAATCCTTCCCGCCATTTTTTTCTCTCACAAATAGCACGGAGATA
TGTCCCCTTTCATGTTCCGTCCAGCACCGGGGCCCCTCTCTTGCTCCTCG
TTCATACTACTTGACGTACCCCCCCTTGACACACACACCTTATCGCGCAC
GAAGATGATATTTAGTCTACCCACAGGCACAGTAGTCGCTCCTGCTTGCA
CAAGGGCTCCTGGCGGGCTTTATCAGCTTGCCGTCAGACGGGTATTGAAC
CTTTCGGTGTATGGTGCGATCAACCTACTGTTCAATCACAGCAGGTAGAC
ACGACAAGGACGACTGGATATGCTACTGTCCCCGCAAAACCCTACGGCAT
TCATGATTGGTTTCTTTTCATGATGCACCTCGTGAGCACCCATGAACGCC
CACGAAATATTTCACGCCTGCCGCACACACGTGATCCATTGCTGCCGCGT
TATGTGTACATGCAGGATTCCGCGAGCGACCTCCCCGCCCTCCAAGCTGC
CGCTGCGCTTGAATCCGCGGCGCAAAGGTACCGGGAGGCGCTGACAAGAT
TACCGGGTCACGCGGAAGCAGGGTATAACCTGGCAACGTGTCTCTCAGAA
CAGGCAGATTTGAAGCTCGACAGCCGAGAGCAGGTACGATGATACGCACA
ATTGTAGACTGATTATTTTTCGTTTCTCACCTTCGGATCCCTGCAGCCAT
TTTTACATTCTAGGTATTTGGGGATCGCTCGGGTAAAATGGGGTGAGAAG
GCAGACTCAGTCGATGCTTTTCGCAGAAACAAGCTCTGACAGCAGTGACC
AGAAAGAGACAACTTGTCGTGAAGGATGGAATGATGATACATTTCCGTGA
AACAGGGATCAGATGATCCAGGCTGGAGTATTTGCAGCACCGAACAAGCG
ACCAAATTTCGTTGCCATGCCCCGCTCCATCTCTTAAGGTTTCGCTCCTC
CGGGAGTCTCGGGCTGTGCTAGAGTCGGTCATCGAAGCGGACACCAGCGG
GCGGGGGGGCACGACCGCCCTGGCGCACCATGCTCTAGGTGTGTGGTGTC
CTACCGTGCATACCCTACGAGTACCTGATACTTCGTACTTAGAAGCAAAA
CTTTTAGTCGTGAGTGTGTAAATAATGCCGTCGTCTCGTGAATGGAAGAT
ATCGTGAATGGAAAATATCGTGTCATTGCTGAACCATGCCTACAACGGAA
CCATCGCAAGAGTTGCTGCGCTGTGATTTATTTTCAGCGTGGGTAGAACT
GTGGTTGTGTCATCCCCGAGTTTTGACACGCGGACACCCGCGCAGACAAA
GTACGGCCTCTTCTCTCTCTCACACACACGTACACGCACACGGGCATAAT
TACCACTGCAGGAAATGTGATTCGCAGTCTTGTGGAAGTGTTCCGAGACC
ACTGCCCAACGGCTCCCTGCGCGGACTGCTGTGTTGGGTGTCCTTCTACG
GCGGAGTGCAAAGAGCAGTCATCGCAGGCCTGCAGGTAATGAGTTGATTC
CAATGTGTGCTGAATGTGAAGCACGCTACAGTATCGTCCTCGTGCTGTGA
ATCATTCGCTTTGGTATGCAGCTACGTGGGTTCCAGTTCATTTACCCTCC
GGTCAACCCCGGAACCACCCATCGATGTGGTGTGTGTGGCCGTGCGCTCT
CCTCACCTATCTAATGATACGAAATCAGTTATGTGAATCCGAGGGAGGTC
CGTGAAACGAAATTTGTGACGAGGTGTTGTACCTCGTGAATAACGAAGGC
CGCCGGGGCACTCTTTTCTTCTGGGGTGTTTTGCATTTTGAAGTTTTCCT
ACAATATTCATCATCCGATTTTCGTTTTTTCTTTTCTGTTACACACCAGT
CGTGCCGTCTTGAGCAGTACCAGTGAAGCAAAACAATCACATCCCTCGCG
ATTGCTGTACCTTGGTGCAAAACTTGGCGCACAATCAGGACAGCAGTGTG
CTCTTCGCAGTGCTGTCTACAGCATCCACAGTGTGAAGTCAAGCTGTAGC
ACCGGTGCATTTCCCGGCGCGCGGGTGGTGTTTCGATTACGACCCGGGGG
ATCGATATCTGAATAGAGATGGCAGTCAGTCTTGAGGCAAGCAAGTTTAC
CATCATCATAATGTATCGTTGCCGTCTTCTAAGGTGTCATTTTTCCTCGT
GGGCCAATCGTACCTATTCATTGATGGACCGATTGACCCCGTCGTAAATG
ACCTTCGTCATCTTCATCTTCGCTTTTTATCTCATGGACCATGGTGCATA
CCTCTTGCAGGCACCTGGAAGCATCAGTTTCCATCATCAAAAACTTGCAG
AACCAATCGGGGGGGACGGAAGAGGTCCTCATCCACTGGGGAGACGCTTT
TGCCAGGTCAGAGCGGTGGAGAAATCGCTCTCCGAAACCCTTCGGTACTC
TTTGTGATACCGTTCCACCCCTCCCCCACCGCGTTGTACTTTCGAGGGAA
GGACGGTGTTGAGGGAAGAGGTCCCATCTATTGTTGTGCATTTTTATGTT
TCTCGATGCCCTTCTTCTCGCTGTTGTTGCTACATTCGACTAGGACAATG
CGATCCGCACTCCCCTCTCGTCACCGAAAATAAAGAAGGAATCAATAAAC
CTAAGGCAAAACTTGTCAAGGAGAATTTTGTTTTTGAAAAGACGTACCCC
ACAACGATGGCGACGACACTTCTTGAGGAATTACGTCGATCAGAAAGTCA
GATTCAAAATATTTTGCACCCCATATCGTTTTGGGAGCACAGTAAACAGG
AGCAAAGTGTCATTCTTCCTTATTGGTGAGCTTCACCGGTCATCAAGACT
CGCTGCTAATGCTGCGCTGTAGAACTGCGCTTCAAGAATAAAGACCCACG
GCAGAACCTCGGTGGCCTCAAGATTACATTTGCTTTTCGAGTCTGTTTCA
TCGTCCATCAAACATGCGTGAAATCTTGGTGGCTTGACTATCAGAAATTG
GGTTTTGGGTCTCAGCCATGAAATTGTCCACCAAATACTTTCACATCTTC
ATTCCGTTTATTGCAATCGCGACTTTTGTGGTTTAGATTTTGGTGACTTG
CTCTAGGATTCGAGCAAATCTATGGGGGTGTTTAACGTTGAAACGATCGG
TCTAAAGGCAAAGTGCCGTAACAGCACTGCAAGGCGCTCTCGGGCTAGCA
GCAAAAACCAAAGAATCAAAATTCTGCTGCTCGGATGGTGTTCATGCTGT
GTGCATCATGTGCGGCACGTCTACGTACCGGCTTTGTGTTGCGTTTAATT
GGCAGAACGTCAGCTTTGTTTTTTCTGGCTGAGAGTGTCTACATTGAAAA
ATGCTGATGATCACGGGGACGGATAATAGGCTCTGACAAACTATTCTTTC
ACATCTTGCTCTCATTTACATTTCCAATTCCACGTTCATTTTGATGTTCG
TTTTACTTTCATTTACACTTTCACTTTCACTTGCACCTAGTATGGGAGAA
GAGGGGGTAGGCAAGAGAATCGATAGAACCCCCCCCCTCGTTATCTTGGT
ATGGCTCTACTCGCTGTACCTCATGCCTCTTTCTGTCTCCCCTGTTTCAC
GGCACCAATATTGCCCGTCTACAGCATGATGCAGATGGTCATGGACGAGG
GTTCTGCAGGGAGGAGTACAAGCGACCACCTACCACCCTCTGACACGGTG
CAAGAAGCGCTAGAGCTGTGTTCGAATGCCTGCAGCAAGGTTTGCCATGT
ATCTGCCTCCAGATGGCACATTCCCGCTCAAAAGCAGTCCAACAGCAATC
CAACTGTTCTTTGCCAGCTTCTCATTCGTGTTTCGCCTGCAATCCAGGAG
AAACTTACGCGCGTCTCGTTCTCTATGTGTAACCTACTCTGTTCTTCCGA
CCTCCTCACGTTCTTGTCATGCTCTCTACTGCAGTAGTATTTGCTCTTAG
GCAGCAGTACTTCAGTACTGCAGGTGGCGAAGTTCATCACGGGACCCCCT
TGAATCAATTTTCAAAGCCCTTGCGACGTGAATGTCGTGTTGCTGCATAC
TGCATATACCCGGTACTCCATATACCCGTTCTTTGTCACAAAGTTTCACT
GCATGTGGTAGTTCTGTGTCACGTGAGTTTCATTTGACACCGAGATACCT
GCAGAGAACCTCCGCAGACCCCCCGGCATAGAAGCTCTGACCAGCTGTGC
CAACACCTATACTGCTTTTTGACCATACCACCTAGTATTCAGAGGCCCTG
GCTTTGGATACTAGCAGCGGGGGGTCCGACACGGACGTTTTGCGGCTCAA
GGCGGGAAGCTTGATGAATTTCTTAGATTGGGCTCTTCCCGAGATTCCCA
AGCAACCCCCAAACGGTGCGTCCGTCCGACATCTGTCCTTCTCTGCGCTT
GTGCAGATTTATTGAGATTTCGTTTCTCTTTACACGGGTTGTTGGCTCTT
TCGTCGTCGGTCGCTGTGTTCTTGTGTGATTCTTTTTTATCTTTCGTGTG
ACATCGCGCCGCCGATGTGTGCCGTTTCCCACTTGACGCTGGCTCTCTGT
TCATTTTGGAAGCCTGTCTGGGCGTTTGTTGCGCTGCATGATGGGTTTTT
ATCTCTAAAACGTGATTTTCTTTGTTTATCGGCTGGGCTGTCTGTTAGCA
ATGTTTTTGTCTCGATCATACAGTGTTTTCGTACCCAGGTCACACATTGT
ATCCAAGTCAGCGATGTTTTTTGTCTCTACAGCAGTGTTTTACTACCGAG
GTCAATTTTTTCTGCACGCTCACACGGGCTGCTCGCTAACATGTACGGAG
TATTTACCTTAGCATTTTTTCATGTCGCCGTCTTCAATTTCGTGTACGTT
CCCCGATCTACTTTGATACCTCTATCAGAATGGAAGTGTTTTGATGTCGC
CCTCTTGTACTTGCTTGATACTGCCTGAAAAGGCGTTATGCCGACTAACG
CCCAGCAAAACAGAAGCAGCATACAACGCCAACCCCACGACAACGGTTTG
TAACCAAATGTCACTTTCGCTGTGATCGGGTCAGGAGTTGGGTTTTCGCC
GGAGGTGCTGCTTGTTACTGGGGAACAAACGGTCGGAATGTTGCTAGGCC
TGGACGATAACAACGTCGGTGGCTTGCTGGCGAAGGGGGATCTCTGCAGG
TAAATTATTGATAACGTGCACCCCTTGTTTTTTTTATGTTTTTCGTCGCC
ACTCGAACCACCAGGTATGTTCGTACTAAAAAAATCATTCGAATTTTAGA
CACGATTTTAGCCCTTTACGTTAGGGGAAAGGCAAATGGTTTGAGAAGGC
CGGTGGGGCTCAGTGCGACACATCCTGAAAAAATAGCTCGTTGCAGCTAC
ACGTAACTTTATCTTAAGTATCTCGTCGAGGTGAATTCCAGTTGCGGATC
CGATCCTCCCCTCCGGCGTTCAGTTATCGACGATACCCCTCGGTCGTATT
TTCGTGATAATCTACACTAAGGTTGCGGGCGAGGGTATCGATGCTCACCG
GCGCCGGCATGCAGGAGGAAGGGGCCCGGCGAGAAGAGTCGGTAGCGTGG
TTTGAGAGGGCCGTGGGCGGGTATCCTCAGGATGCAGAGGCTTTGACGAC
TGCGGGGGAAGGGTTATTGGAACACGGCAGGTGATATTGAGAATTCCGAA
AGGAGAGATAGCACTCCAAGACGCAGAGTTGCACGATTTTGTGGCGGAAG
ACTTTTCATCGTCGCCTTCCGCGAGTTTACCCTGGTATGACACCGTTGAA
CTGCCTTTCGTTTCAAATGCTAGTGCTTGCCGCAGCAAGAGAGAGCTCGA
GAGCGGAGGCGCTCACCGCTGGTGTTTTGGTTAGGGTGAGCTTGTTTTGC
ATCAAGTTTGGCGATTTCGCAACGCTCACGGGCTGGTGTAAACTACCCCC
TGTTAGTAAGAGCAGTCCTCGCAGCCATGTGGACTTGACTTTGCAAGACC
TTGGTTGCCTGATTTGAACCCATAAGCGTCATACCCTTTCATGCGGGCCT
CCGAGTTGTTGGTGAAAGTGATGCATCATATTATGAAACGTTGCAACACG
TCGGTGAGAGACGACTGCCGTGATAACCGGCTACCCAAGAACACAGACTG
ATACCAACAAGGTGAACGGACCAACATCGAAATATATTATACTGTTCCAG
TAGGCAGTACAAGGTTTAGAGCTTACAACTGGCGGTTTACTAGCGCTACG
CTCCGCCCTTCATCATTGTCGACAACACCTTTTATTGCCTGTATGCGTCA
AACCCCGGTGAAGACGGACGATGGCTGTCTACAGGGAGGTCGCGTGGCCT
GCTCAAGGCGGCTACGGTTCTACTGTTGCGCCAGCACCACACGTCGAGAG
ATTGCGGATGTCGGCGGTCACGTGGCTACAGGTTGGTACATGTCTCGTAT
TGAGCGTGAATAATCACATATTGTATATACGAATGGAAGGATATTGCGCG
ACTGCAAGCCCGATCGATGAATACAGAGCATCATTTTTTCTTTGTATTCG
GTCTAGAGAGCAGCTTGTAGGACTGGCGCGGGATGGGATATGCCCCGCAC
GTTTCTGGCCGCAAAGAGCCCGACCCTTCCGATGCCAGTACGGTTTATCC
TTGGCACAGCACCCAGCAGCTCATCCCCTGCTCAGTACGCCGAATCGACA
GAGTTTTTGCCAACGTATCGAATCCTCTCTTGCCCGTACCCTGTCACCAG
GACGCCGGAAATCTCCTCTCCAGCGCGTGTGCTATTGATACCTCCGACAC
GGATTTGCCGTACAACGCAGCTTGCGCTTTCGCACTCTCCGGGGACCACA
CCTCTTGCTTCCGTGCCCTGAGCGAATTCTGCCGACGGCTCACCCTTACT
CTCACAATCGCAGCTGCTGCGTCGTCGGGAGGTGTGTCTTCTAGCAAAAG
GGACGCCGCGAGGTGGTCGCTCAGGGAGGTTGAGGATGACGTAGATTTGG
AAAGCGTTAGGGAGGCCGGATGGTTTATTGACCTGTTGAGGGGCACGAAT
GCGACCCTCGTTGGCGGGCCGTGATAGGACCGAGCTGTGTAATTATGGTT
GGCGGGATCTTCTTGCTGTTTTCAGGGGTCCTTACCGTTCATTTCGGAGC
AAATAGCACCTTTTTGCGATCGTTCGGAGGAGGGCTCCTTTTCATGCCTT
CCGTTTCGAAGTCATGTCGACAGATTTTACGTGGTGAATTTTCTTTGTAA
ATTATCGGTCGAAAAGAGGTTGGAGGAGGGTGCTCGTGTTTCTCGTCACG
TGGACTGTTGTGGCGGTATCAACGTGGGAATAGTTTCATAGAGGAGGCGC
CGCACAACTCGTTTTTTAGACCCTGGAGAGAATTGATGCCATTCCCGCCT
CGCCAATCAAACAAAAAATAACCGCAAGAGGCGCCCTCGTAGCACCGGTT
TGTTACTTGCAAATACTGTACAAGAGTGTGCGACACAACATCCCACAAAT
TGTGTGTGTTTTTCCTTCTTTACTCAATGTCGAAGGTGGATGACGGCTGT
AGATATCATGAATATTGTACGCACGTCCAGATCCGTTGATCTCCTGATAG
TCCAATGTATGTCTGTCTCCTGTTTTCGGTGGGCAGTTGGTCGACTCTTG
AGTCTCCCCTTAACCACTTGATTTTGTAGACTCTTCTTGCTAAAACTACG
GAAGAAATATCGCGTGCCCCTTGTCATTGGTCACTACGACCACTCCATCG
GGACCCTCTGCGGCTGCGCCTACGGAAATGACGAAGAGATGCTACTCGTA
CTGTAAGATTCACGCCGTCTGCCCAAAAGAAAGCGGCCAGGCTCAAGCAG
GCGCAGATCCCGAAAACCAGGCTGGCGAAGGAACTGGCGGTGACTCAAGA
GGCGTAGAAGCGCGGGCGCCGACCGAAAGCACCCCAGCCGCCAGGACCCC
GGCAGCTAGGCCAGTCGTAGCTAAATTGCTTCTTCTCTGGATTATTCCGT
GGAATTAGCCAAACCCTCACCGGACACCCAAGATGGCACGGGTGGGTTGC
AGCCGATACCGAGGAGGAGGAAGAGGGATACAGCGACGAGGGGAGGAAAG
CCCAAGGAGGGCGAGGTGTCCCCCGAGCGCCGCACGCGTGGAGCACTCCC
CGATGGCGGGAGACACCCTTCGCGGGATGGAATGGACTCCCGCTACAGCG
CGACCAGCCCCAGGAGACTTTGACGAAATATGAACGTGACGATACGCGAT
GGCTCCCGCAACAGACAACGTTCACAGTGTGCGGTATGCCCTTGCTTCTT
GGATGACACCTTTGGGGTTTCCTCCTTTCACTCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig163:418124..430757- >mRNA_P-littoralis_Contig163.59.3 ID=mRNA_P-littoralis_Contig163.59.3|Name=mRNA_P-littoralis_Contig163.59.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1614bp|location=Sequence derived from alignment at P-littoralis_Contig163:418124..430757- (Pylaiella littoralis U1_48)
ATGACACATCGCCAGTTCGCGAGTCTCTCCTCCACCAAGCACACCATGGG
GAAGGGCAAGAGGAAAGGTTCTGCCGGCTCTTCATCGGGAGATGGGCGCA
ACGGTGACCAAAAAACCCTTCGCTCGGCTGTAGAAAAAGCCGTCAACGAG
GCGGTCAACTTACAGGATTCCGCGAGCGACCTCCCCGCCCTCCAAGCTGC
CGCTGCGCTTGAATCCGCGGCGCAAAGGTACCGGGAGGCGCTGACAAGAT
TACCGGGTCACGCGGAAGCAGGGTATAACCTGGCAACGTGTCTCTCAGAA
CAGGCAGATTTGAAGCTCGACAGCCGAGAGCAGGTTTCGCTCCTCCGGGA
GTCTCGGGCTGTGCTAGAGTCGGTCATCGAAGCGGACACCAGCGGGCGGG
GGGGCACGACCGCCCTGGCGCACCATGCTCTAGGAAATGTGATTCGCAGT
CTTGTGGAAGTGTTCCGAGACCACTGCCCAACGGCTCCCTGCGCGGACTG
CTGTGTTGGGTGTCCTTCTACGGCGGAGTGCAAAGAGCAGTCATCGCAGG
CCTGCAGGCACCTGGAAGCATCAGTTTCCATCATCAAAAACTTGCAGAAC
CAATCGGGGGGGACGGAAGAGGTCCTCATCCACTGGGGAGACGCTTTTGC
CAGCATGATGCAGATGGTCATGGACGAGGGTTCTGCAGGGAGGAGTACAA
GCGACCACCTACCACCCTCTGACACGGTGCAAGAAGCGCTAGAGCTGTGT
TCGAATGCCTGCAGCAAGTATTCAGAGGCCCTGGCTTTGGATACTAGCAG
CGGGGGGTCCGACACGGACGTTTTGCGGCTCAAGGCGGGAAGCTTGATGA
ATTTCTTAGATTGGGCTCTTCCCGAGATTCCCAAGCAACCCCCAAACGGA
GTTGGGTTTTCGCCGGAGGTGCTGCTTGTTACTGGGGAACAAACGGTCGG
AATGTTGCTAGGCCTGGACGATAACAACGTCGGTGGCTTGCTGGCGAAGG
GGGATCTCTGCAGGTTGCGGGCGAGGGTATCGATGCTCACCGGCGCCGGC
ATGCAGGAGGAAGGGGCCCGGCGAGAAGAGTCGGTAGCGTGGTTTGAGAG
GGCCGTGGGCGGGTATCCTCAGGATGCAGAGGCTTTGACGACTGCGGGGG
AAGGGTTATTGGAACACGGCAGACGGACGATGGCTGTCTACAGGGAGGTC
GCGTGGCCTGCTCAAGGCGGCTACGGTTCTACTGTTGCGCCAGCACCACA
CGTCGAGAGATTGCGGATGTCGGCGGTCACGTGGCTACAGGACGCCGGAA
ATCTCCTCTCCAGCGCGTGTGCTATTGATACCTCCGACACGGATTTGCCG
TACAACGCAGCTTGCGCTTTCGCACTCTCCGGGGACCACACCTCTTGCTT
CCGTGCCCTGAGCGAATTCTGCCGACGGCTCACCCTTACTCTCACAATCG
CAGCTGCTGCGTCGTCGGGAGGTGTGTCTTCTAGCAAAAGGGACGCCGCG
AGGTGGTCGCTCAGGGAGGTTGAGGATGACGTAGATTTGGAAAGCGTTAG
GGAGGCCGGATGGTTTATTGACCTGTTGAGGGGCACGAATGCGACCCTCG
TTGGCGGGCCGTGA back to top
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