mRNA_P-littoralis_Contig163.39.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig163.39.2
Unique NamemRNA_P-littoralis_Contig163.39.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A6H5KDR8_9PHAE (Peptidase_M14 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDR8_9PHAE)

HSP 1 Score: 766 bits (1978), Expect = 1.110e-263
Identity = 379/574 (66.03%), Postives = 437/574 (76.13%), Query Frame = 2
Query:  227 LAKVYSAQDRYQLPSPGSCSEDGSVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITAR---AVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDAMGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLGSRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAIDGAG--VVVVDEELGVDLEWTVGGAFEVDTTQLIWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEWGSRLVKGWPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVVTAT---ATAPPEPPGH-ADVNNNTKGDG 1921
            + +VYSAQ R+ L SPG CSEDGS+ CEQWVLHISDH T+ A+PERPEVFFSGCLHGDEQVGPTA++E AKLMVYAA+CHADSSAKECD++ LR APESV WLARLALTRSTVIMPM NSIGY+ T R ENG+DPNRDFPY Q P+ CMTTITAR   +VNEVWREHAFQLAVTFHGGMV +AYEWGSPDHPH+ D+ GNW D+SPDH AQ+ELTAGLSQF+GGFK+ G+TFK YPTGRMNELVYPV+GGMEDWAYAGSWG+  G CEP  NG YPKEKTIY+SA LRALNILVEAS+ K P Q+LLGSRQGLL   PS EEH NGHVARN+RL+LM VDLVEPYV+W P      +     V+V DE+ GVD+EWTVGG+FEVD TQL+WGPWPE + + TR+DWE+LAAAA  +++SP Q+G SRW ++   D+  + T FR RF L                                   AFVVAV TVDQ W  + V+G+PD+GPQSH+VNARTSEDWL+EN GHIVRGRL+WLS PLKV  +    + AP  PP   A   N T G G
Sbjct:    1 MQQVYSAQYRFGLRSPGPCSEDGSIRCEQWVLHISDHNTMAAEPERPEVFFSGCLHGDEQVGPTAVVEMAKLMVYAAVCHADSSAKECDDDALRDAPESVPWLARLALTRSTVIMPMANSIGYYNTDRWENGMDPNRDFPYGQMPQHCMTTITARQRESVNEVWREHAFQLAVTFHGGMVGMAYEWGSPDHPHRQDRKGNWLDISPDHEAQKELTAGLSQFAGGFKENGRTFKPYPTGRMNELVYPVAGGMEDWAYAGSWGEGKGVCEPGVNGQYPKEKTIYSSAMLRALNILVEASNFKHPPQALLGSRQGLLGHTPSEEEHGNGHVARNIRLALMAVDLVEPYVQWGPFDVETEENGSTKVLVADEKHGVDMEWTVGGSFEVDATQLVWGPWPEEAASFTRKDWEELAAAADSESRSPEQTGHSRWANAQGSDEEEA-TVFRTRFEL--------------------GTALPTLPEDDGIPAAFVVAVATVDQAWAEQSVQGFPDVGPQSHYVNARTSEDWLEENNGHIVRGRLRWLSTPLKVAASLPPHSEAPVAPPNTTAPAVNKTSGGG 553          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A2R5GMQ1_9STRA (Carboxypeptidase D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMQ1_9STRA)

HSP 1 Score: 385 bits (988), Expect = 3.000e-117
Identity = 241/597 (40.37%), Postives = 313/597 (52.43%), Query Frame = 2
Query:  149 PDNQFQTLNYGNIVEQLYDLATNYPHLAKVYSAQDRYQLPSPGSCSEDGSVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDAMGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLGSRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQLIWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEWGSRLVKGWP-DIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVVTATATAP-----PEPPGHADVNNNTKGDG 1921
            P    + L+YG+IV++L+ L  +YP L ++Y AQ RY LPSPG C   G+  C+Q+VL I++  TL  +PERPEVFFSG LHG+E+VGPT +ME A+L++         S   C N           WL RL  TRS  IMP TN++GY++  RTEN +DPNRDFP   KP  CM TI ARAVNE+WREH FQLA+T+HGGM A+A+EWG+         +     +SPD  AQ  L + +S  +G    G      YP  R+N+LVYPV GGMEDW YAGSW  +   C+P    GY KEKT Y S  LRA N+L+E S  K P +  LG+ + ++      E   +GH+ RNVRL+L + DLV+PYV+W  +  AA D A     D+   +   W VGGA  VD T L +     N   +T+R              + A SGR+RW   G     ++  T   +  LD                                    VVA+  VDQ WG       P +I PQSH VNART+  W  EN  HI+ G+LQW S  +    AT   P     P  P     N +T G G
Sbjct:   55 PFRTVKYLDYGDIVDELHRLEKDYPDLVELYDAQARYNLPSPGRCGSHGN--CKQYVLRITNEATL-PEPERPEVFFSGELHGNERVGPTTLMEFARLLL--------ESYTTCSNA----------WLQRLVNTRSIYIMPTTNALGYYRNTRTENTIDPNRDFPI-DKPHSCMETIAARAVNELWREHLFQLALTYHGGMQAIAFEWGT--------LTNRKFPISPDDIAQLMLGSAMSAVAGDLHKGEGP---YPHDRLNDLVYPVRGGMEDWGYAGSWAASAKPCDPKHFFGYAKEKTQYTSDQLRAFNMLIETSRDKTPDEGTLGTTEEMMRP----EGGGDGHIPRNVRLALFMTDLVQPYVQWVQVPDAA-DSADR---DQSATLSFAWEVGGALFVDQTFLEYSYVDANGTLITQR--------------TDAMSGRTRWNEGGVWSGHNTSNTKGVQG-LDIGLVKEDDLHDRERWPFAPAFVQTLPPLPAKAQLQEVVAIAVVDQNWGKHAGGAVPPEIPPQSHVVNARTNAMWKAENADHIITGKLQWASDAVSFPRATRETPYCASFPNAPAVKPGNASTSGSG 595          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A2P4Y514_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y514_9STRA)

HSP 1 Score: 362 bits (929), Expect = 2.930e-110
Identity = 224/585 (38.29%), Postives = 311/585 (53.16%), Query Frame = 2
Query:  161 FQTLNYGNIVEQLYDLATNYPHLAKVYSAQDRYQLPSPG--SCSEDG-SVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWA--PLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQL-IWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEW---GSRLVKGWPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVVTA 1855
            ++  +YG IV+ L +L T YP  A+V+S QD+Y LP     +C+ +  +V CEQ+V+ I+D TTL  DPERPE+ FSG LHG+E+VGP  ++  A+L++        S A   D            WL  L  TR+ VI+P  N+ GY+  VR E  +DPNRDFPY+ K +QCM T+ AR++NE+WR+H FQL +TFH G   + YEWG+ +H  +  KS    + SPD  +Q++L   +S+F G F+D G+    YP G MN++VY V GG EDW +A SW +A      +G C P++ GGYP  KT YN+AT RA N+L+E SD K+P  + LG     S + L + +P+ E    GHV RNVRLSL+ +DLV+PYV W   P      + A             +W V GA  VD TQL +W     NS TLTR                 AQSG +RW     +D  S     +  F  +                                   ++ A+ TVDQ+W   G+      P + PQ+H VNART++ WL  N   +VRG+  W S  +K+V A
Sbjct:   25 YEERSYGEIVDYLLELETKYPEYAEVFSVQDKYDLPKHKELNCTRNNETVPCEQYVIKITDETTL-PDPERPELIFSGSLHGNERVGPQVVVALAELLL--------SHAGRTDGN---------PWLQHLVKTRTIVIIPTANAYGYNHNVRRELKMDPNRDFPYNLKSDQCMVTMAARSLNELWRDHLFQLGITFHAGTECITYEWGAKNHVKESGKS----EKSPDDRSQQQLARIMSRFGGKFEDSGEY---YPDGTMNDVVYAVDGGYEDWGFAASWENAYTTPKPIGECNPSSFGGYPAAKTKYNNATHRAFNVLIETSDSKQPNATSLGDSSTLSDKALADYLPATE--MVGHVPRNVRLSLLYIDLVQPYVLWKTHPHNTTVTEAA-----------TFKWEVAGAITVDNTQLKVWSDDSANS-TLTR-----------------AQSGVTRWYH---EDLGSKVDNNKGLFSANVKFSAAGTY--------------------------YIQAIATVDQDWATQGTGEDAPVPKVKPQTHIVNARTNDAWLYSNNDRVVRGQTVWTSQAVKIVVA 524          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: G5AJ11_PHYSP (Peptidase_M14 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AJ11_PHYSP)

HSP 1 Score: 357 bits (916), Expect = 2.550e-108
Identity = 221/584 (37.84%), Postives = 310/584 (53.08%), Query Frame = 2
Query:  161 FQTLNYGNIVEQLYDLATNYPHLAKVYSAQDRYQLPSPG--SCSEDGS-VECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYH-QKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQL-IWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRW--KSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEWGSRLVKG---WPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVV 1849
            F+  +YG IV+ L +L T YP+ A+V+S QD+Y LP P   +C+     V CE +V+ I+D +TL  DPERPE+ FSG +HG+E+VGP  ++  A+L+    + HA+              P+   W+  L  TR+ VI+P  N+ GY+  VR E  +DPNRDFPY+    ++CM T+ ARA+NE+WR+H FQL +TFH G   + YEWG+ +H  +  KS      SPD  +Q++L+  +S+F G F+D G+    YP G MN++VYPV GGMEDW YA SW +       +  C PT+ GGYP+ KT YN+AT RA N+L+E S  K+P  S LG     S + L + +P+ E    GH+ RNVRLSL+ +DLV+PY+ W    + A           +     +W V GA  VD+TQL IW   P N+ TLT+                 AQ G +RW  K  G   K +    F A                                        +V AV TVDQ W ++        P + PQ+H VNART++DW   N  H+VRG+  W S   K++
Sbjct:   27 FKERSYGEIVDFLEELETKYPNYAEVFSVQDKYHLPKPAELNCTRANEIVPCENFVIKITDESTL-PDPERPELIFSGEVHGNERVGPNVVVALAELL----LSHANR-------------PDGNPWIKHLVKTRTVVIIPTPNAYGYNHNVRRELNVDPNRDFPYNLASDDKCMVTMAARALNELWRDHLFQLGITFHAGTECITYEWGAKNHVMESGKSHK----SPDDRSQQQLSRIMSRFGGKFEDSGEY---YPDGTMNDVVYPVDGGMEDWGYAASWENEFTTPKPIRTCNPTSFGGYPRAKTQYNNATHRAFNVLIETSHSKQPNASSLGDSSTLSDEALSDYLPASE--MVGHIPRNVRLSLLYIDLVQPYLLWKTHPQNA---------TVKKAAAFKWEVAGAITVDSTQLKIWSDNPANA-TLTQ-----------------AQQGVTRWYHKDLGLKAKDNKKGLFSANVKFPAAGTY------------------------------YVQAVATVDQNWATQGTGEDIPVPMVKPQTHIVNARTNDDWFYSNNDHVVRGQKMWASEVAKII 526          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A8K1CMJ5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMJ5_PYTOL)

HSP 1 Score: 355 bits (912), Expect = 9.120e-108
Identity = 232/597 (38.86%), Postives = 308/597 (51.59%), Query Frame = 2
Query:  116 FLAVGSLCSDLPDNQFQTLNYGNIVEQLYDLATNYPHLAKVYSAQDRYQLP--SPGSCSEDGSVE-CEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQLIWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEW---GSRLVKGWPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVVTA 1855
            F AVG+   +     F+   Y  IV+ +Y L    P    V+SAQDRY LP  +   C+ +G  E C  +V+ I+D +TL  DP+RPEVFFSG LHGDE+VGP ++   A+L+V       D + +   N           W+  L   R+ VIMP TN+ GY K  R E   DPNRDF Y  K   C  T+ ARAVNEVWR+H FQLA+TFHGG  +V+YEWGS +H    +  G   D SPDH  Q  +  GLS+F G F +GG     YP G MN++VY V+GGMEDWAYA SW +A      +G C+P+  GGYP  K+ YN AT R+ NIL+E S+ K+P +S LG     S   L + +P+ +    GHV RNVR++LM +DLV+PYV+W   T ++  G      DE   V   W V GA  VD T L      + ++T       +L A          Q+G +RW      D A+S  T +  F                                      +V AV TVDQ W   G+      P++ PQ+H VNART+  W   N G  V+G+L+W S    +V A
Sbjct:   13 FAAVGAHAQNTTATAFKYRTYSQIVDAIYALEGKAPQFVDVFSAQDRYGLPLRTELMCTRNGVSEPCRHYVIKITDESTL-PDPQRPEVFFSGALHGDERVGPQSVTALAELLV-------DHATRADGNP----------WIKHLVKARTIVIMPTTNAYGYDKNTRAERSYDPNRDFNYG-KGSTCFQTMVARAVNEVWRDHLFQLAITFHGGTQSVSYEWGSTNH----ELPGGGSDKSPDHQGQWYMGRGLSRFGGKFSEGGY----YPDGPMNDIVYAVNGGMEDWAYAASWENAYTTPKPVGVCQPSTYGGYPAAKSNYNDATHRSFNILIETSNSKQPTESSLGNDASLSDAALADFLPATQ--TIGHVPRNVRIALMYIDLVQPYVQWKNGTESSRAG------DE---VTFNWEVLGAVTVDDTHLKISKTADFNET-------ELTAF---------QTGVTRWYHP---DMATSSATNKGLF--------------------------KHSVTFKEPGTYYVQAVATVDQNWLKQGTGKDVPVPNVPPQTHVVNARTNPSWSYSNNGKTVQGQLEWASPVATIVVA 526          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A6A4EQM2_9STRA (Peptidase_M14 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EQM2_9STRA)

HSP 1 Score: 353 bits (907), Expect = 5.610e-107
Identity = 224/586 (38.23%), Postives = 311/586 (53.07%), Query Frame = 2
Query:  161 FQTLNYGNIVEQLYDLATNYPHLAKVYSAQDRYQLPSPGS--CSE-DGSVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYH-QKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWA--PLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQL-IWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRW--KSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEWGSRLVKG---WPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVV 1849
            ++  +YG I++ L +L T YP  A+V+S QD+Y LP      C+  + +V CEQ+V+ I+D  TL  +PERPE+ FSG +HG+E+VGP A++  A+L+    + HA  +             +   WL  L  TR+ VI+P  N+ GY+  VR E  +DPNRDFPY+    E+CM T+ ARA+NE+WR+H FQL +TFH G   + YEWG  +H   V +SG   + SPDH +Q++L   +S+F G F++       YP G MN++VY V+GGMEDW YA SW +       +  C PT+ GGYP  KT YN+AT RA N+L+E SD K+P  + LG     S + L + +P+ E    GHV RNVRLSL+ +D+V+PYV W   P    A   A             EW V GA  VD+TQL IW   P ++ TLTR                 AQSG +RW  +  G   K ++   F A                                        ++ AVTTVDQ+W ++        P + PQ+H VN RT+EDWL  N   +VRG+  W S   KV+
Sbjct:   30 YKERSYGEIIDYLLELETKYPDYAEVFSVQDKYDLPKRKELQCTRANKTVPCEQYVIKITDEATL-PEPERPELIFSGAVHGNERVGPQAVVALAELL----LLHASRT-------------DGNPWLKHLVKTRTIVIVPTANAYGYNHNVRRELDVDPNRDFPYNLDSDEKCMVTMAARALNELWRDHLFQLGITFHAGTHCITYEWGGKNH---VMESGT-SEKSPDHRSQQQLARIMSRFGGKFEE---IDDYYPDGTMNDVVYAVNGGMEDWGYAASWENEFTTPKPIRTCNPTSYGGYPSAKTTYNNATHRAFNVLIETSDSKQPNATSLGDSSALSDEALNDYLPASE--MVGHVPRNVRLSLLYIDMVQPYVLWKTKPHNTTAKKAA-----------TFEWEVAGAITVDSTQLKIWSDDPSDA-TLTR-----------------AQSGVTRWYHEDLGLKVKKNNKGLFSASVEF------------------------------AAAGTYYIQAVTTVDQDWATQGTGDNIPAPKVKPQTHLVNVRTNEDWLYSNNDRVVRGQTVWTSQVTKVI 529          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A662Y4J9_9STRA (Peptidase_M14 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4J9_9STRA)

HSP 1 Score: 352 bits (903), Expect = 4.450e-106
Identity = 222/572 (38.81%), Postives = 311/572 (54.37%), Query Frame = 2
Query:  173 NYGNIVEQLYDLATNYPHLAKVYSAQDRYQLP--SPGSCSEDGSVE-CEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEW--APLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQLIWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEW---GSRLVKGWPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLS 1831
            +YG IV+ L +L + YP  A+V+S QD+Y LP  S   C+   + E CEQ+V+ I++ ++L  D +RPEVFFSG LHG+E+VGP A++  A+L+    + HA               P+   W+ RL  TR+ VIMP  N+ GY   VR E G+DPNRDFPY+    +CM ++ ARA+NE+WR+H FQLA+TFH G   V+YEWG  +H   V +SG+  + SPD   Q+EL   +S+F G F++  KT+  YP G MN++VY V+GGMEDW YA SW +A      +G C P++ GGYP  KT+YN+AT RA NIL+E SD K+P +S LG     S   L + +P+ +    GHV RNVRLSL+ +DLV+PY+ W  +PL               ++    +W V G   VD+TQL +              W+ LA   +V   +  QSG +RW      D  +S +  +  F  +                                   +V A+  VDQ W   GSR     P++ PQ+H VNART+ DW   N G  V+G+  W S
Sbjct:   35 SYGEIVDYLLELESKYPEYAEVFSVQDKYGLPQRSELQCTRGSATEPCEQYVIKITNESSL-PDAQRPEVFFSGALHGNERVGPQAVVALAELL----LTHATR-------------PDGNAWIKRLVGTRTIVIMPTANAHGYDHNVREELGVDPNRDFPYNLGNSKCMESMAARALNELWRDHLFQLAITFHAGTRCVSYEWGGENH---VQQSGS-SEKSPDDRGQQELARIMSRFGGVFQED-KTY--YPDGTMNDVVYAVNGGMEDWGYAASWENAFTTPAPIGVCNPSSFGGYPAVKTLYNNATHRAFNILIETSDSKQPTESRLGDSATLSDAALSDYLPAAQ--TVGHVPRNVRLSLLYIDLVQPYLVWNESPLNATV-----------QVATKFKWEVAGGITVDSTQLKF--------------WK-LADGPNVATLTTKQSGVTRWYHK---DLGTSTSNNKGLFSEEVTFPSAGVY--------------------------YVQAIGIVDQSWATQGSRNDVPVPNVKPQTHIVNARTNVDWSFSNNGRNVKGQKAWAS 524          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: W2HF70_PHYPR (Peptidase_M14 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2HF70_PHYPR)

HSP 1 Score: 350 bits (897), Expect = 1.440e-105
Identity = 225/606 (37.13%), Postives = 316/606 (52.15%), Query Frame = 2
Query:  119 LAVGSL--CSDLPDNQFQTL------NYGNIVEQLYDLATNYPHLAKVYSAQDRYQLP--SPGSCSEDG-SVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQ-KPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQL-IWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRW--KSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEWGSRLVKG---WPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVV 1849
            LA+G +  C  +P     T+      +YG IV+ L +L T Y   ++V+S QD+Y LP  S  +C+ +  +V CEQ+V+ I+D  TL  DPERPE+ FSG +HG+E+VGP  ++  A+L++        S A   D            WL  L  TR+ VI+P  N+ GY+  VR E G+DPNRDFPY+    ++CM T  ARA+NE+WR+H FQL +TFH G   + YEWG+ +H  +  KS    D SPD+ +Q++L+  +S+F G F+D   + + YP G MN++VY V GGMEDW YA SW +       +  C P++ GGYP EKT YN+AT RA N+L+EAS+ K+P  +  G     S + L + +P  E    GHV RN+RLSL+ +DLV+PYV W                +    V  EW V GA  VD TQL +W               +D       Q    AQSG +RW  K  G   K ++   F A                                        +V A+ TVDQ+W ++        P + PQ+H VNART++DWL  N G +VRG+  W S  +K+V
Sbjct:    5 LAIGIVVACISIPPPSSATVTIYGERSYGEIVDYLLELETKYQDYSEVFSVQDKYGLPKYSEVNCTRNNETVPCEQYVIKITDEETL-PDPERPELIFSGSVHGNERVGPQVLVALAELLL--------SHASRTDGN---------PWLQHLVKTRTIVIVPTANAYGYNHNVRRELGVDPNRDFPYNLGDTKECMETTAARALNELWRDHLFQLGITFHAGRECITYEWGAKNHVKESGKS----DKSPDNLSQQQLSRVMSRFGGKFED---SAQYYPDGTMNDVVYAVDGGMEDWGYAASWENEYTTPKPIKECNPSSFGGYPAEKTRYNNATHRAFNVLIEASNSKQPNATTWGDSSTLSDEALSDYLP--EAEMAGHVPRNIRLSLLYIDLVQPYVLWKTHPYKG---------NVNKAVTFEWEVAGAIIVDKTQLKVWS--------------DDPTGVTHTQ----AQSGVTRWYHKDLGLKVKTNNKGLFSA------------------------------DVDFATTGTYYVQAIATVDQDWATQGTGEDIPVPKVKPQTHIVNARTNDDWLYSNNGRVVRGQTVWTSQTVKIV 526          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A3R7JWC5_9STRA (Peptidase_M14 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JWC5_9STRA)

HSP 1 Score: 349 bits (896), Expect = 2.070e-105
Identity = 217/579 (37.48%), Postives = 306/579 (52.85%), Query Frame = 2
Query:  173 NYGNIVEQLYDLATNYPHLAKVYSAQDRYQLPSPGS--CSEDG-SVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYH-QKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWG------DAMGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQL-IWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSG-DDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEW---GSRLVKGWPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVV 1849
            +YG IV+ L +L   YP  A+V+S QD+Y LP P    C+    +V C+Q+V+ I++ T+L  DP+RPE+ FSG +HG+E+VGP A++  A+L+    + HA  S             +   W+  L  TR+ VI+P  N+ GY +  R EN +DPNRDFPY+    E+CM T+ ARA+NE+WR+H FQL +TFH G   ++YEWG  +H   V  SG    +SPD   Q++L   +S+F G F++   T+  YP   M ++VY V+GGMEDW YA SW       + +G C PT  GGYP  KT YN+AT RA N+L+E SD K+P  + LG     S + L + +P  ++ A GHV RNVRLSL+ +DLV+PY+ W  L      G  ++           W V G+  VD+TQL IW     +  TLT+                 AQSG +RW     D   +++   F A   +                                    FV A+ TVDQ W   G+      PD+GPQ+H VNART+  W   N G +V+G+ +W S   K+V
Sbjct:   32 SYGEIVDYLLELEDKYPEYAEVFSVQDKYNLPRPKELQCTRSNKTVPCDQYVIKITNETSL-PDPQRPELIFSGEVHGNERVGPQAVVVLAELL----LSHAARS-------------DGNPWIQHLVNTRTVVIIPTANAHGYDRNSRRENNVDPNRDFPYNLDNDEECMVTMAARAINELWRDHLFQLGITFHSGTRCISYEWGGKNH---VFDSGKGM-ISPDDRGQQQLARIMSRFGGRFEED-DTY--YPDATMTDIVYAVNGGMEDWGYAASWENKYTTPEPIGVCNPTTYGGYPTAKTKYNNATHRAFNMLIETSDSKQPNATSLGDNTTLSDKALSDYLP--DDEAVGHVPRNVRLSLLYIDLVQPYLLWKKLPSKVTAGKTMIFA---------WEVAGSITVDSTQLKIWTEDDASDLTLTK-----------------AQSGVTRWYHKDLDTSDSNNKGLFSANVEI------------------------------AAAGTYFVQAIATVDQCWTTQGTGDNSSVPDVGPQTHIVNARTNAKWEYSNNGRVVKGQTEWASSVTKIV 527          
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Match: A0A225VSS3_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VSS3_9STRA)

HSP 1 Score: 349 bits (895), Expect = 2.720e-105
Identity = 214/581 (36.83%), Postives = 306/581 (52.67%), Query Frame = 2
Query:  173 NYGNIVEQLYDLATNYPHLAKVYSAQDRYQLPSPGS--CSEDG-SVECEQWVLHISDHTTLEADPERPEVFFSGCLHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLARLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITARAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPDHAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYAGSWGDA------MGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLLG-----SRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWA--PLTRAAIDGAGVVVVDEELGVDLEWTVGGAFEVDTTQL-IWGPWPENSDTLTRRDWEDLAAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVVAVTTVDQEWGSRLV---KGWPDIGPQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVVTA 1855
            +YG IV+ L +L T YP+ A+V+S QD+Y LP      C+ +  +V CEQ+V+ I+D  TL  DPERPE+ FSG +HG+E+VGP  ++  A+L++        S A + D            WL +L  TR+ VI+P  N+ GY   VR E  +DPNRDFPY+   +QCM T+ ARA+NE+WR+H FQL +TFH G   + YEWG  +H  +  KS    + SPD+ +Q++L   +++F G F+D G+    YP G MN++VY V+GG EDW YA SW +       +GAC P++ GGY   KT YN+AT R  N+L+E S+ K+P  + LG     S + L + +P+ E    GH+ RNVRLSL+ +DLV+PY+ W   P    A D A             +W V GA  VD TQL +W   P ++ TLT                  AQSG +RW     +D        +  F  D                                   +V A+ TVDQ+W ++ +      P++ PQ+H  N RT++DW   N   + RGR  W S  +++V A
Sbjct:   32 SYGEIVDYLLELETKYPNYAEVFSVQDKYDLPKRKELQCTRNNETVPCEQYVIKITDEATL-PDPERPELIFSGAVHGNERVGPQVVVVLAELLL--------SHASKVDGN---------SWLQQLVKTRTIVIVPTANAYGYDHNVRGELDVDPNRDFPYNLDNDQCMVTMAARALNELWRDHLFQLGITFHAGTQCITYEWGGKNHVKESGKS----EKSPDNRSQQQLARIMTRFGGKFEDSGEY---YPDGTMNDVVYAVNGGYEDWGYAASWENGYTNPKPIGACNPSSFGGYSPAKTNYNNATNRVFNVLIETSNSKQPSVTSLGDSSTLSEKALSDYLPASE--MVGHIPRNVRLSLLYIDLVQPYLLWKTHPHNITANDSA-----------TFKWEVAGAITVDNTQLKVWADDPADA-TLTH-----------------AQSGVTRWYH---EDLGLKVNNNKGLFSADIEIAVAGIY--------------------------YVQAIATVDQDWATQGIGEDAPVPNVKPQTHLANVRTNDDWFYSNNNRVARGRTVWTSQVVEIVVA 527          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig163.39.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDR8_9PHAE1.110e-26366.03Peptidase_M14 domain-containing protein n=2 Tax=Ec... [more]
A0A2R5GMQ1_9STRA3.000e-11740.37Carboxypeptidase D n=1 Tax=Hondaea fermentalgiana ... [more]
A0A2P4Y514_9STRA2.930e-11038.29Peptidase_M14 domain-containing protein n=1 Tax=Ph... [more]
G5AJ11_PHYSP2.550e-10837.84Peptidase_M14 domain-containing protein n=1 Tax=Ph... [more]
A0A8K1CMJ5_PYTOL9.120e-10838.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4EQM2_9STRA5.610e-10738.23Peptidase_M14 domain-containing protein n=4 Tax=Ph... [more]
A0A662Y4J9_9STRA4.450e-10638.81Peptidase_M14 domain-containing protein n=2 Tax=No... [more]
W2HF70_PHYPR1.440e-10537.13Peptidase_M14 domain-containing protein n=9 Tax=Ph... [more]
A0A3R7JWC5_9STRA2.070e-10537.48Peptidase_M14 domain-containing protein n=4 Tax=Ph... [more]
A0A225VSS3_9STRA2.720e-10536.83Peptidase_M14 domain-containing protein n=1 Tax=Ph... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig163contigP-littoralis_Contig163:303827..319878 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNB3
PFAMsPeptidase_M14
Model size3186
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons16
Evalue5.33e-271
EggNOG OGs28MYZ@1|root,2QUHR@2759|Eukaryota
Ec32 ortholog descriptionZinc carboxypeptidase family protein
Ec32 orthologEc-24_000110.1
DescriptionZinc carboxypeptidase
Cds size2358
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789788.0529323-UTR-P-littoralis_Contig163:303826..3045661680789788.0529323-UTR-P-littoralis_Contig163:303826..304566Pylaiella littoralis U1_48UTRP-littoralis_Contig163 303827..304566 -
1680789788.2259517-UTR-P-littoralis_Contig163:319790..3198781680789788.2259517-UTR-P-littoralis_Contig163:319790..319878Pylaiella littoralis U1_48UTRP-littoralis_Contig163 319791..319878 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789788.0651476-CDS-P-littoralis_Contig163:304566..3047851680789788.0651476-CDS-P-littoralis_Contig163:304566..304785Pylaiella littoralis U1_48CDSP-littoralis_Contig163 304567..304785 -
1680789788.0756922-CDS-P-littoralis_Contig163:306020..3065031680789788.0756922-CDS-P-littoralis_Contig163:306020..306503Pylaiella littoralis U1_48CDSP-littoralis_Contig163 306021..306503 -
1680789788.083921-CDS-P-littoralis_Contig163:307171..3074241680789788.083921-CDS-P-littoralis_Contig163:307171..307424Pylaiella littoralis U1_48CDSP-littoralis_Contig163 307172..307424 -
1680789788.0946002-CDS-P-littoralis_Contig163:307965..3080811680789788.0946002-CDS-P-littoralis_Contig163:307965..308081Pylaiella littoralis U1_48CDSP-littoralis_Contig163 307966..308081 -
1680789788.1048596-CDS-P-littoralis_Contig163:309074..3091761680789788.1048596-CDS-P-littoralis_Contig163:309074..309176Pylaiella littoralis U1_48CDSP-littoralis_Contig163 309075..309176 -
1680789788.1170776-CDS-P-littoralis_Contig163:309878..3100221680789788.1170776-CDS-P-littoralis_Contig163:309878..310022Pylaiella littoralis U1_48CDSP-littoralis_Contig163 309879..310022 -
1680789788.1265442-CDS-P-littoralis_Contig163:311226..3112961680789788.1265442-CDS-P-littoralis_Contig163:311226..311296Pylaiella littoralis U1_48CDSP-littoralis_Contig163 311227..311296 -
1680789788.1376333-CDS-P-littoralis_Contig163:311953..3120331680789788.1376333-CDS-P-littoralis_Contig163:311953..312033Pylaiella littoralis U1_48CDSP-littoralis_Contig163 311954..312033 -
1680789788.1489587-CDS-P-littoralis_Contig163:312959..3130291680789788.1489587-CDS-P-littoralis_Contig163:312959..313029Pylaiella littoralis U1_48CDSP-littoralis_Contig163 312960..313029 -
1680789788.1587646-CDS-P-littoralis_Contig163:314154..3142401680789788.1587646-CDS-P-littoralis_Contig163:314154..314240Pylaiella littoralis U1_48CDSP-littoralis_Contig163 314155..314240 -
1680789788.1700072-CDS-P-littoralis_Contig163:315231..3153641680789788.1700072-CDS-P-littoralis_Contig163:315231..315364Pylaiella littoralis U1_48CDSP-littoralis_Contig163 315232..315364 -
1680789788.1788106-CDS-P-littoralis_Contig163:315873..3159541680789788.1788106-CDS-P-littoralis_Contig163:315873..315954Pylaiella littoralis U1_48CDSP-littoralis_Contig163 315874..315954 -
1680789788.1886687-CDS-P-littoralis_Contig163:317040..3171651680789788.1886687-CDS-P-littoralis_Contig163:317040..317165Pylaiella littoralis U1_48CDSP-littoralis_Contig163 317041..317165 -
1680789788.1983795-CDS-P-littoralis_Contig163:317666..3177801680789788.1983795-CDS-P-littoralis_Contig163:317666..317780Pylaiella littoralis U1_48CDSP-littoralis_Contig163 317667..317780 -
1680789788.2087708-CDS-P-littoralis_Contig163:318212..3183471680789788.2087708-CDS-P-littoralis_Contig163:318212..318347Pylaiella littoralis U1_48CDSP-littoralis_Contig163 318213..318347 -
1680789788.2175207-CDS-P-littoralis_Contig163:319643..3197901680789788.2175207-CDS-P-littoralis_Contig163:319643..319790Pylaiella littoralis U1_48CDSP-littoralis_Contig163 319644..319790 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig163.39.2prot_P-littoralis_Contig163.39.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig163 304567..319790 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig163.39.2

>prot_P-littoralis_Contig163.39.2 ID=prot_P-littoralis_Contig163.39.2|Name=mRNA_P-littoralis_Contig163.39.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=786bp
MLIRWTSLFFLAVGSLCSDLPDNQFQTLNYGNIVEQLYDLATNYPHLAKV
YSAQDRYQLPSPGSCSEDGSVECEQWVLHISDHTTLEADPERPEVFFSGC
LHGDEQVGPTAIMETAKLMVYAAMCHADSSAKECDNEVLRAAPESVQWLA
RLALTRSTVIMPMTNSIGYHKTVRTENGLDPNRDFPYHQKPEQCMTTITA
RAVNEVWREHAFQLAVTFHGGMVAVAYEWGSPDHPHKVDKSGNWQDVSPD
HAAQEELTAGLSQFSGGFKDGGKTFKAYPTGRMNELVYPVSGGMEDWAYA
GSWGDAMGACEPTANGGYPKEKTIYNSATLRALNILVEASDLKRPRQSLL
GSRQGLLESIPSREEHANGHVARNVRLSLMVVDLVEPYVEWAPLTRAAID
GAGVVVVDEELGVDLEWTVGGAFEVDTTQLIWGPWPENSDTLTRRDWEDL
AAAASVQNQSPAQSGRSRWKSSGDDDKASSPTTFRARFYLDLDLDLVKPP
DGVGLRLGEGKGAPSAAAAAAAAAPAFVVAVTTVDQEWGSRLVKGWPDIG
PQSHFVNARTSEDWLQENEGHIVRGRLQWLSVPLKVVTATATAPPEPPGH
ADVNNNTKGDGGQVGLGGGSVKGTATPRPLSPAAIDNKTKRDDAPGVLGG
GDAEGTAAPFEMGSPSDVSKEGETMNIPALVVMAVMMASLAVAAFVMRTR
GVRLGGGGGGGTMAGRQRGGLRGVSQDPDRRQSGGVALGLGKSGDVVSRR
RSQEIPSARGRGHSGTRDQSESTERRGLLSPIGET*
back to top

mRNA from alignment at P-littoralis_Contig163:303827..319878-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig163.39.2 ID=mRNA_P-littoralis_Contig163.39.2|Name=mRNA_P-littoralis_Contig163.39.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=16052bp|location=Sequence derived from alignment at P-littoralis_Contig163:303827..319878- (Pylaiella littoralis U1_48)
GTGGACTGAAGTGTTGTAGTGTTGCGCTTGTCATCTGCTTGCTGTGAGGA GTAGAGAGGGGGGGTTGCCGCAGCCCTGAGCGTGGAGCATGCTCATACGA TGGACTTCCTTGTTTTTCCTGGCTGTTGGCAGCCTCTGCAGCGACCTTCC AGACAACCAGTTCCAGACTTTGAACTACGGCAACATCGTGGAGCAGCTCT ATGATCTCGCGACTAATTATCCCCACCTAGCCAAGGTAAGGCAACACCCC CCAGTCGTGGTAGGACTAGACACTCACGAAAGAGTCAGTCCAACTCTACC TCTTGAGCAGAACTGCTGCAGGTCTGGCTTGCTGCAATTTTTTGTTGTGA TTGTTGGGGGGCCGTGTATAAAATGTAACATCCAGGAAGCAGCTCTCATG CAAGATACCACTCCGACCTCCTCCCCACTAGAAGAGTGCCCCCGCAGCCA GGAGTTGGGAGGTCAGTCTTAGATGAGACGGTATCACATCACTCAAAGAG CACCGGTTTTACTCAAAGAGCACCGGTCTTACCCCCCGAGCGTCATGAGA AGGCGCACCTCGAAGATACCCACATCCTTGGTAGCCAGCCAGCCAGCCAG CCAGCATCATCATCATCATCATCATCATCATCATCATCATCATTAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAAGCACGGGTTGGCGCACAACGTAAC ACAACACAGCGGCAGCGGGCAGCAGACTCGGACCATCTCGAATCCACCAG AAGTTATCCGAATCCGAGCCTGCGTAATGTACACACCAAACTATTGGCCT GTGCTGTTGTCTTGCCGAACCGCAACACATACCTGCAAGTACCCGCTGTG TCCTGCTTTCTTTTGTATCTTCGGTGGGCCAGTCGGTACCATGCTCTGAT TGGACGAACCCCCCCGTAGGATGAAAAACCCACCGCGGAGCTACCGCAGT ACTTGCTGCCAACTCTGTACAATTGTAACAAAATCTGCAGACAACCGATT TTGGTCAGCTGCTTGGCATTTGTAACACCCACCCAGTGCGATCCGACTCA CATGTTACTGCGTTGTATAAATATGACATGATGTGATGGACGCAAGGAGT AGTGTACGGGAAGCGGTAGGGCGGACGACCTGGCTCTCTCTCTCTCTCTC TCTCTCTCTCGCTAAATATCTATGTGCCTCTGTGCGAGGCAACCAATACC ATACGATCTCTTTGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG TCAGTCGCGGTTAACAGACTGAGGACGCACCGACAAAGAAGTTCGTATGA TATCGCACATCAATAGATGCTTAAGCTTCGCGTTATTCCAGTCCGCGCTT TCACTATTTTGCACTCTTGGTCCTACAACGTTTGCAGGAATGCCTGCCTG CTCCTGAGCGTGAACCCGCGTTGTTTGTTTCAAGTGCTCTAGGTTGACTG AATTTTTTACCGATTGGGTGGCCAAACTGATTTTCACTAGATGATCCCAG TTCGACCCCACCGTCCATTGATTTTGACAAGGTTTACTCGGCTCAGGACA GGTATCAGTTGCCCTCCCCTGGTTCGTGCTCCGAAGACGGCAGCGTGGAG TGCGAGCAGTGGGTCTTGCACATATCGGACCACACGACCTTGGAGGCCGA CCCAGAGAGACCGGAGGTGAGGCGACCAACCTGCTCACTTCGCCTACTGC TTTGGATGTGCACCGGCACGCCCAACCCTGACCTCCCAAGCTAATTTCAC ACGATGTACCTGACCGCATATGGCACGGGACCAAGTGATGTTTTTGGGGT TTAGTTTTAAGGCCTTGTCGTCAGGCAGGCGTTCTTAAGCAGGTGCCTGC CCCGATATCGCACGAATCGCAATAATATACGCGTCAAACGGCGCAATGCG GTGTGATTTAGTTGTCGTCGTTGCCAGAGGCATGGCGGGTCTTCTCAAGC GGGTATTCCCAGGAGGTGACATTTCATGGTATGGTATCAACAACAGCAAC TGGTAATACCCTGGGAGTGGCGCCGCGCGCAATGTGGGTGTAGCATCGTG TTGGACGCGGTATCCCCTTTAAGGTATCCATTTTCGTGTGATTTGCAGGT GTTCTTCAGCGGGTGCTTACACGGAGACGAACAGGTGGGACCAACAGCGA TCATGGAGACGGCCAAACTCATGGTATACGCCGCGATGTGCCACGCCGAC TCCTCTGCCAAGGTAAATGTGACCGCGATTCAACCGTGACGTTATATATC CCACAGCTTATTGAGCCTGAGACACGCAACCAGGTACCAGTCTAATTCCA CGGGCTCATGGAGTCGAAGTTCGACGAGCAGCTTGGCGGAATGGGTGGAA ATACGTCCTTTCTTCCGTGATACTTCAGTATGCATGTGTTTGTGTCACTC AGGGTGCAACGGTTTCGATATGTACATCTATGTGATATTTGCAATGCGCT GTGCTCTACGCGCGTGCGACGTTCATGACATTCATCTGCACTACAGAATC AGGCCTCGTGCTCTAAATGAGTGCAACGTTCTGTGTAATATTATTGACGA TTGCCACATTCCAGACATGATGCATCTAGGCAATGAAACAGTACGTTGTG CTCTATGTTTGAGTGCGACGTTGTCGATATGCGTCTGTATTCTTTCTGAA GGAAGTGCGACGTTTCATTCGTGCACATGCATCTGTAACTTAGCAATGCT CTGTACTTTACAGGAGTGCGACAACGAGGTGCTGAGAGCCGCCCCGGAAT CGGTCCAATGGTTGGCACGGCTAGCCCTAACTCGCAGCACCGTGATCATG CCCATGACCAACTCCATCGGGTACCACAAAACCGTCAGGTACGATGGCAG TAGGCCCGAAAGGATCACGAGGAACAGTCTCTCTGGGACCACTTAGGGTG GCCCAGCCCAGCTAAGCTTTCCCCTAGCAGTAGGAGCTATATAACGCCGT GGTTCATTGCTCCGTGCGCGTCGCACGAAGAAGGCTAGGATCACCAGACC ACGTGCTGCAAGAAACGAGAATACTAAAGTTGTGAGCAGGAGAAACGCTT CCTCGGAGTGAGACCCTGTCCCGCAAACGTTACCGACAATGGTTGTATGC GAGGCATACAAGCCACGGCCAGAACAAGCGAAACTCGCTGGCATCAGGTG AACGTGCATTTTTTCACATAGGTACGGCAGCATTTTCCAGAAAAAAAAAA AAGAGGCGCGTTGCAGGCGAATCACGTGGTTCTGGCTGGCCAAACACAAC CACCTGGCCAACCAATCAATCAGTCAGTCGGTCAGTTTTTTTTTTTACGC CCGGCAAAGAATAGAAGGTGCGTTGGGTTGAGCTCTTAGCGCCCCGCCCG AGGGACATTCAGCAGGGAGGACGCGTATTACCACGGCGACCATGCAAGGG AAGCCATGCATGTGTTTACTCGTTATCTTCTCCCTTGTTCGTGGCACCGA ACCAACAGCAGTGACTACGACCGCGTCAGTGTGGTCCAATTCATGACGCC GTCTCTCCCGAAAATGGGCATGATGTTCACCTCCATGTTGTTGTGCGGTG CCTCGGGTCCCGTAACAGAGGTATATGTGCTAGGCTCTGCTGCGTGCCTT GAGACGGGTACTTCTCTGTTCTGTGCTTAAATTCTCCTTCCAACAGTTTT CTTGTATATGCTTTACTGTGCTATGCTACTTTACGCTATGCGATGCTTTG CTCTGCTCTGCTATGGTATGCTTTGCTTTGCTATGCTGCTATACGAAGCA CTATGTTATGCTATGCTTTGACATGCCACAGGAATGCCATGCTTTGCTAT GATATGCTACGCCTCGATATGCTATGCTTTACTTCTCTGTGCTGTGCTGT GCTTTGCTACGCTATGCTAATCTTTGCTATGATATGCTAATCTTTTCTGC TGAAAACCTGTCGTGGGGGAACAGGACGGAAAACGGTTTAGACCCGAATC GCGATTTCCCGTACCACCAGAAGCCGGAACAGTGCATGACCACAATCACG GCAAGGTCAGTTCAACGGTCGTTGTTTGTCCCCGAGGACCAGACAAGTCA AGCGCGTTACCTAGCCATCGCGCATGACCGACCCTACTGCCGCGGCTTGC GAATCCGGCATTCGTTGGGTTCCGATGCAATGCGGTATAGTATCGTGCAA AGACAGATCATCGCAGGAAAATGTGAAAGCCTTTCGATCCCGATGCAATG CGGTCCAGTGCTTGTATGATTTAGCGGCAGAATATTCATGAAAATGTGAA GACCTTCGAGAGAGATGTAGGGGCCGCGTTTGGTGTCCCGCGAGATCATT GTGTCCACTTACCACGTGCCCCTACGATGGAAGACGCTACCATACGCAAG ATAGCACCCCCGCCTCCCACCCTCTTGGTTTTGCGCCTCCACTCTTGCCG CTGTAGAGAAAGTCGTACACTACGATACCATAGGTCCGAACACGTCTTCT CTCGCTTGTTGTTTGCCTGACAACAACACGTGCGATAAATCAACAACAAC AACAACAACAACAGGGCGGTGAACGAAGTGTGGAGAGAGCACGCCTTTCA GCTGGCGGTCACATTTCACGGGGGCATGGTGGCCGTGGCGTACGAGTGGG GCAGCCCCGACCACCCCCACAAGGTGGACAAAAGCGGCAACTGGCAGGTG TGGGGCCGTTCTTGACCTGCGTTCAGTACACATACAGTAGACACGACAGG ACGACCCCTCCGCCTAAGCTAATTTTCGCGGAGGCGTTTTTCAATTATTT CCAACGCGGGGAAGAGCGCAAGCACCGAGAGAAAGCTGTTGAAAAGGATT GTCGAAATCTTGGTCCCCAAGTACAGCAGTATTTATTTACTTGGACGCCA CCATTGCCGGGTTGCTGTACCCTCCGCGATGTCGAGAGGCGTGTATTTGT ATGTGTCTGAAAAATACCCTGCTGCTGCTGCTGTACCTTCCGCGATGTCG AGAGGTGTGTATTTGTATTTGTCTGAAAAAAATCAGCCGGGCCAGGGAAG GGGGGGGGGCACGTCTGCCAACGTTACCCTGTTCACTACGGTGTACTGCT GTGACATAGCGGCGGTGTGATGGCTTGGATTCACAGGGCCCTTTTCTGGG TGGCATCGTGTGTGATGCATCATGAGGCTTACGGACACAGACACAGCTAG CGTCAGCAGTGTTCCCACGGAGGCGGGATGGTAGCAGCGGGTTTCTCTGT GCAGTTGTCGAATGGATGGGGCTTTCTCTTTTTTTCCCCCGAGGTTGTGT ACGCCTCCAGAAGGGCGTCTGGCTGGACTACCGTCTCGAGAGTGGTATCT ACCTGGTCTACCTTAGGTGCCATGAGTATGTTTTTTAATACGCGGCGTGA CAGAGGTACGCTCTTATGGACATCAGGTCACTCGAAAATTCAGGCATTGA TACAGCAGGAGAGTTGGTCACTCTCGTACTTGTTTGTTCGGAAGCGCTTG AGAAATGCCCCCGGGGGTATAATATGAATTGCGCATCTCGCTGCTGGCGT CGGCACATGGTGCGTTGACTCTCTGTGGCATCCAATCGACATTACCGTAC ATTTGTAGCCCGCGCTTTTGCCCATTCCACCAGTGCCTGTTTCACGCGGT GTTCTTGTTGCTTTCGGTGCTGTGATTGAGAACGTCAGGACGTGAGCCCC GACCACGCCGCCCAGGAGGAGCTCACCGCCGGGCTCAGCCAGTTCTCCGG CGGCTTCAAAGACGGAGGAAAGACGTGAGAGGAGACTTTGCGCAGGCCCC TCAACAAATCAGTCAATGCGATTCGAAGATGTTGTTCGTTTTTTCGTACG AAGTCATCGCCTAAGATCGATCTAGCCCGTGGCAAAAGCAGGACTGAGCT CTGGGGAAGATGCGAAGAATGCACACACAGAGCGCAAGGAAGGGTGCACA AAAGCCCGAAGAAGGTATTCGTGCGCCCTCTGATACTAGCAGTGTGCAAT GCTGCTGTAAGCTGGACGAACGCTTCCACCACCGCGCAGGTATCCATTGG ACTACCGTATAACGTGATCATCGTGCGAAGTCCCTCCCCGTCCCAATATG AACCACTCGTGACTGCAGACCACAGCAGTTGTTGCCTGGAATGCTGCTGC CTGCAACGTACCTGCTACACTTTAGGTCCGGTAGTCAGAAAAAGAGGACG GAGAATAGCCATCTCGACCATGTCTGAAGTGCTGTCAGAATGACGAGACT CGCCGGCAGTGCAGTAAAAGAGCAACAACCAGCAAGTGAAACGGCCACCG CACTCTTGTCCACGATCGCATTTTTTTTCCCGAGTCGTCTATGAAGGGCA CGTTAAATCCCAAGTGACGTTGCAAAGGAGTCGTTCCACAATGAAGGACA CAACGCCGGCACTCATGCAGCAGCGTAGCTCCAAGCGGCAGCATGGACTG GTTACACTCAACAGCCTGCTGCGTGTAGTTGTTTTTTCTCGGTAAAGTTG CACCAAGTGAAAGGTTTAAAAATCTTGGGGAGCCCGACTTCAGAGCTCGT TCAAGAATGCCATACGAATGATGCTTTCAGTCCTGTTCGCTGAACGCGCT TCTCGTCCCACCTTGTGTCGGTAGCTGCTCCAGTCAATCGCCTAACAAAG ACAAGAGTGATGCGGGAAAGGCGCGTTATGTTGTTGTTGTTGTTGTTGTC GGCGAAAGTCCAACGTCTCGCGTGCTTGCCCTTTGTTCACGGGCAGTTCA CATACGGCACGTTCGCAAAGTGTACCGATACTGGTGTACTACTGTGCCAT CATCAATCATCAATCGTATCGCCCCCCCGCTGCTTTACTGCGCTCGCTCC TACCGGGCCGTCACCATACGGTGGCGTCGTGGCGGAACGTGCGCGGCAGG TTCAAGGCTTATCCCACTGGCCGGATGAACGAGCTGGTGTATCCCGTCTC GGGAGGCATGGAAGACTGGGTGAGGGTTTCCTTAATATAAATGTGGCATT GTTGCTGTGCACGAAAACACTGTCCCGCGGTTTTGTTGCAAGCGCGCACA CGCACGCACATACGTACCGTAGGTCGCACAAGATACCACACACCCCGGAC CGATTTTCAAAGCACAATTACTCCACAGCGGAACAATTGTGGGTGTCGAA AAGGGCCGTGTTGAAACCATCTCGTCGAGAGCTTTCCAAAAACGTATCGT TTGATGCTGGCACCCTCGTCGGTGTGGAGTAACTGAGGTTTGAAAATCGG TCGAGGGGGTGTGGTATCTTACGTCATGTTACCTACGGTACCCACGGGCT CGCATTCATGTCGTTTTTGGAGCACAATCACTTTTCCGCTGCTTTCGTCT CGCCCGCCGCGTCAACACGGTCTCGGATGCCCGGGTGAGAGCGTTGAAGC ACTCCTCGGTGCATGATAGTTGCTGGTTCAACTGCTCTCTCTCACCCAGG CAGCTCCTTCATTACACGACTATCAAATTATCTTGGAAAAAAAGCGGCTC GTCGAAAGCAACAGCCCCTGTGGTCTCATTTTTGATTTCTCCCGGCGTTT TCTTTCCGCAACGGCTCTCTCTTGAACGGCTCTTCAACAACGGTACTTTA CCAAAAGGATCGTGTTGCGATCCTGAAGGGAAAGCCTTCCACCCCAACGG CGAGAGAATTGCCCTAGCCTGCTGTAGCCGCCAAGGCGTGATCATCCCAG GCTGTCTCGTGCAAGGCAAGGCGTGTCGCTGCTGCACAAAGCGCCTCATT CCAATGTGCAAACCCTTGCCTGCTCGCGCTGGTTCTGCATGTTCTCTCGT TCCGATCGATGGGTAGCATACATGTGGGTGGCCTCTTTTGACGATACGTA TGTATGATATTTCGCTGTTTTGATGCCGCCGGGAACAAGTAACAGGCGTA CGCCGGCTCATGGGGCGATGCGATGGGTGCATGCGAACCGACTGCTAACG GGGGCTATCCCAAGGAAAAAACGATGTGAGTTCGTTCCACCTGTACCACA CATCAAATCATACAACACGCATACGTACGCCCGTTTCTTATTACTTTGAT CCAAGTTTGTTGTTGTTCTCGTTGAAATCTTTCTTGTTTATTGGGTCTGT AGTTGGGTCAGAACCAAACCATACTAGGCATGCCATCGGAGCGGGTTCGG TTGCGTACGCACCTCCGTCGATTTTGAGTGTTATTCCATTCTTAGGAGAA CACCATGTAGGTCCAGCTGTGCAGCAATGCCCAGGGCTGTTTTAGTTTAG TTTTGTTTGTTTTGTTTGTTTTGTTTTTTTTGTTTTTTTTTGTTTTTTAT TTTTATTTTCCGATTTGACCTTCTCGTGGGTACACACGGTGCTAGCTAGT ACTGGCTGCGCGCACGCACAGCTCAGCTCAGGCCATGCCAGAAAAAACGA AAAAACGGACATGTTCGGTGTACCGCATCGCTGTCTGACTATACCATATG GTACCACGTGCGACTGTTGGGTGTTGACGTTTTTCGCAATGGTATTCACC GTATAGTCGCGTACGAGTTTGATGCGCCATCACCGGTGTGATTAGTTTGC ACACGTTCGGCCGGGACCGAACCGATGTTGCTGATCTGCTTTACACCTCC CGCCGTCTCTTCCGCCCTTCGCCGTCGTACAGCTACAACTCGGCCACTCT AAGGGCACTCAACATCCTAGTGGAGGCCAGCGACTTGAAGCGCCCTCGCC AGGTACTGTAACGTAACATGCTGACGCCGATCCAGGATTGAGACGTGAAT CAAACACCATGAAAATGGTCAATACGCTGTACACCCCTTTCTTTTTTTGA GCCTGTTGTTCTGCATTTTTGTACTTTGGCCTGGCCACCACAGATGGTAC CCCAGCGGTATTATATCTGATTATTGATTTTGTTCGGGTTACCACGTTTA TTTTATTTTCATTTATGTTCCTCCTTGCACGGGGTATGTGTCGGGTTTGT GACCACGGGCAAGACTTTGGGTGGTGAGCTACTGTGAGAATCAACAACAT CAGCAAAAACAACAACAACAACAACAACAACAACATCCCGGAACAACAGC AGGTCTCCGTTTTCCAATGCTTGTGTGACTGTGCTGTCATAGCTGTCCGC GCCGGCGCTACCGTTGGCGTTTGGAGCCGCGTTAATCCACGCAGCACCAT GAGAGTAGAAGGCGAATAATTCGGAGGAAAACAAAATTTGATTGAACTAT CGACGAGGGCACTTAAGGGAGTGCTGACAGATCCCATCTCGCGACCAAAT AACAAAATAAGCAAAAAAGGCAAGCACCGCAGTGGGAAGTCGAGGAACAA TAAATAAAAATGCCTGTGTCGACTTCCTACTGTCCGTGTGACCCCAACCC GGCTGGAGCGTAGTCTACCTACCATAATATACATCATATACATCCCGGAA GGGGCGTAGAGTGGCGCCCAGAATAGATAGATGGGACGACAACACACACC CAACGAGACCATCCATTCGGCGGGGAAAAACTCACTGATATCCTGCCCGA CTCCCGTGTTCAATGGCGCCGCTTGCTGTGGTTGTGACTGCCGTGATGGA CGAACTGCTACATGGCTTTCCGTGGTATGAATCAAGCCAACGTGTGATAC GCCTCCGCACACCTGAGAGAGAGAGAGAGAGAGAGAGCTCTCGCTGATTC ACGGTGCCCCGCCCTACCCCAGCCGTTTGCTGAGGTCTACGCCGACCCTG CTTGAACGCGCCTTCCGCCCCCCCCTGTGCAGAACCCCCCTCTGTGCTAG AAACTCACCCTTGTGCCAAAAAAATCGGAAGCAAGGGCCAAAGTCAGTAA CATCGCGTCCGTCCCCTCGCTGGTTCGTGTTTCTCCCTGCACCTTTGTAC GCTATTGCTCAACCCGACTGCTGTTGTTCAACTCCTGCCGCATTCCCCCC GTGCAGTCCTTGTTGGGATCTAGGCAGGGGCTGCTCGAAAGCATTCCCTC TCGGGAGGAGCACGCCAACGGACACGTCGCTAGAAACGTCCGGCTGTCGC TGATGGTGGTGGACCTGGTGGAGCCGTACGTGGAGTGGGCGCCATTAACG GTGGGACTGCCAAGCTTTTCCTGTAGGTTCCGGCCACGAGCTGTGACACT TGTGTGTGTGTGTGTGTGAGTGTGTCTGTCTGTGTGTCTGTGTGTGTGAG TGTGTCTGTGTGTGTCTGTGTGTGTGAGTGTGTCTGTGTGTGTCTGTGTG TCTGTCTGTGTGTCTGTGTGTCTGTGTGTCTGTCTGTGTGTCCGTCTGTG TCTGTGGTGTCGTCCCACCTATATTCTGCACGCAATTCTACACGTTTTGG TATAACAATGGCCACGCGGGAGGAGGGCCGCCACAGGATGCTTTCTGTTT TTGTTGCACTAATGTTCTGCGGTGCTTGCCCTAACGTTTATCGTGAGAGA GGAAGGTTAGGTTAACGACCTTTGCCCTCGTCGATTCGGTTCTCGGAAAA CAAAACATGTTTATCGATGGCCCATCTACATTCAACATCTGCGAGCGATT TAAATCGGAAAGCGACACAGTTGGCTGTGAAAGTGTGCGGTGAGGGTAGA CATGCTATCATACGTAGGCGACACCAAAATCACTCGTTCAACAGCAAACC GTGAGCTCACTTTTTTTTTAATCTCGACGTCCTGTGTCGATGTGTACGCA CCTGTAATTTAATTCCAAGTGCCTGGTAGACCCGAAGTAGATATCGGGGC GGTTTTCATGGAAATGCAGCACCCTCATGCTACACATGCTATGATACCCC AGAGAGCTGCAATCGACGGCGCGGGAGTGGTGGTTGTGGACGAAGAGCTT GGCGTGGATCTAGAGTGGACCGTGGGAGGAGCGTTTGAGGTGGACACCAC TCAGGTGGGACTCAGTTGTAGCTGTCGTCGTTGGTGCTGCTGGTGCCGAT GTTGTTGCTTTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTCGTTGTGGTTGTTGTTGTGATAATAAAATATCGAAAACAAGCGGCTC CTGTTGGTACATGAGTGCTCGCCTTTGCTTCGCCTCTTTGGCGATTGATT GCAAACGACAATTATCGGCTAAATAATAAACGCCTCCTCCCAAAACAAAA ACTTAACTCTCCCCCTGCCAAAATCTACTCAGAAGTGGTATGATATGCAT TTTCGAGAAAGCTCACCCCTCTCATCATCGATCAGGAGCTGTCTGCGCGG CCTTTCCGGGCCGCACGTACGAGTGTGCCGCAAATACTCCACGTACAGCA GTGATGTTCTGTCTGTTGACCAACTGGTTTCCTGTGAAAATTATGGCAAA GTGCATATGATGTGTGTAGCTACCAAGTACGACACCCCTTTGTGCAGGCA TCTTGGGCCCGACGCCAACTAATACTAATTACCCCGAGAATACCAATTAC CCCGGTGATGACCAGTTGCCTCGTTACAAACCAGGCACCCCAGTGTACCG GTTCCCCGGCTGTAGAACAAACACCCACTTCCCCCGTTGTAAACAATCAA CCAGTTCCCCCGTTGTAGAACAATCAACCAGTTCCCCCGTTGTAGAACAA TCACCCGGTCGATGCGAAGACATCCCGCAAAATCGCCCCTCCCCCTGGCG GCGGGATTCCCCGTGAAGTGAATCGTCCGGCAAAAGCGAACGATCCGCAA TATGATATCATATGATAGCGCGAAATGTCGCTCTCAGAGCGTGCGCTGAC ATTCGTATTTACTATTTGCCGCACTGCAGTCGTACATGAGCTGACATTCG TACTCGCTATTTGCCGCACTGCAGTCGTACATGAGCCCGCGTTTCACCCT TAACCCCCCCCCCCCCCTTCGTGCGCCGTTCGCCCCCGCCCCTGCAGCTC ATTTGGGGACCGTGGCCGGAGAATTCTGATACTTTGACGCGCCGAGACTG GGAAGACTTGGCCGCCGCGGCTAGCGTCCAAAACCAAAGCCCTGCGCAGT CTGGCCGCTCCAGGTGGGGCACAAGTATTATGTCTTGTTTGTAGTATAGA GAAGAGGAGGTTTCGTACGTGCGCGCTTGAAGTGGTTTCCACCCCCACTA TTTCCAAGTAATCTTGACTCACACTACAACAACAGTAGCAAATCTAATCT TTCGTGTAGTTTTTACTCATACCTGCAAGTGCTATTTATGTTTTATTGTT TCCGAATTATTTTAACCCGTATCATACGACTTCCGAGTTATCTCGACCCA CACTCAACCCTGCAGCGATTCTTCCCACACTTTTGTTCTTCGTCGAGACC CTTTCTGTGAGCCAGTTTAAAGAATTGATGTCGCCGAAACTATGACCCTG TCTCGTCGGTGGGTACGTACGTGGGTGGTTTGTAATACTTCGTCACGTTT CCGCAACCATGGTGGAATGAAGCGCGTCCTACGCTGTAGACGAATAACTT ACTCAGGTGACAGAGGTGAGGTCCGCCAACACATGCAACAACTGTTGTTC GTCTACTGCTGCTGCTGCAAAATGCTGCAAACGCTTGCTCCTGCATTATT GCAGGTGGAAGAGCAGTGGCGACGACGACAAGGCATCGTCCCCCACCACC TTCCGAGCAAGGTTCTACCTCGACCTCGACCTCGACCTCGTGAAGCCCCC CGACGGGGTTGGACTGCGATTGGGGGAGGGCAAGGGCGCTCCTTCTGCTG CTGCTGCTGCTGCTGCTGCTGCTCCGGCGTTCGTCGTGGCGGTTACAACC GTCGATCAAGAGTGGGGGTCACGGCTCGTCAAAGGCTGGCCAGACATCGG TCCACAGGTACGGTACGCGTTCAGGTTCACACGCAGCCAGTAAGGTATCC CCCGATGTAGAACCCCACGGTCCTTATTCTTGAAGCAGTTTCTGAACCCG TCCGAATTCATTCGGAGTGATATTTTATGCAACCCACACCGATAAATACC ATGTACTTCGTAGAATGGTGAATTTTCAAACAGACGTAACCCGTTCCGTC AGTTTTTATCGGAAGTTTTCGCAGGTTGTTATGTTTGGGTTGTTCGTTGC TGAAGCTTTTTCTGTTGGTCTTAGGGAATGAGAAGGAGACTGAAATCATT TGTGTCGTGCAGCACCAACGCCCTTCGTACATTTCAAACACGTCCAGATT CCTCGTGCACTCTGGTGGCCTTGATTTGAGTGCGGTCGTACGAAATCTAG TTTCAAGAAGTACTTCGTGTGCCGATCGAGAAAGCACGTCCTTTCACAAC CTGCTCGACAGCAGTGTCTACCGCCTCGCGCGTGCCTCCTCCCGCAATCG CAGCATCAGCTGCTCCTGCTTATCTAGTTCGAGACGACACGCCTTTCACT TGTTTTTTGTTTTTTGCGAATCGACTCCACTCTAAACTTGCCCGGAACGA AACGATACGATACGATACGATACGATACGAAACAAAACGGAACGAAACGA AACGAAATGAAATGAAACGCGACAGAGCCACTTCGTCAACGCGCGGACGT CGGAGGACTGGTTACAAGAGAACGAGGGCCATATCGTACGGGGACGGCTG CAATGGCTCTCGGTGCCGCTAAAGGTAGTAACGGCAACGGCAACGGCACC GCCCGAGCCACCGGGACACGCTGACGTCAACAACAATACCAAGGGAGATG GCGGACAAGTAGGTTTGGGAGGCGGTTCCGTTAAGGGGACGGCAACGCCG AGGCCACTGAGTCCCGCCGCCATCGACAATAAAACGAAGAGGGATGACGC ACCAGGAGTGTTGGGAGGCGGTGACGCTGAGGGGACGGCGGCCCCATTCG AGATGGGCTCGCCCTCGGATGTTTCGAAGGAAGGAGAGACGATGAACATA CCGGCCTTGGTGGTGATGGCAGTCATGATGGCCAGTCTTGCCGTGGCCGC GTTCGTGATGCGGACGAGAGGGGTACGCTTAGGCGGCGGCGGCGGCGGCG GCACCATGGTGAGACAAATGCTTCTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTTGTTGATAATTCTCAGCATTAGCTCACCGCTATCGTCTCGAAGGT GGCCACAAACCAGGCACACATGAAACGAGGAGGAAAAATGAAGTAAAATG GACCAAGTAGTAGAAGGCCGCACCCAAAAGAAGAGAAAAACAAAACAGGT GACGACATCATCCCGCCCAACCAAGGGGTATGATATGTTTTTGTCGTTGC CAAAGATACAAAAAAACACTTCCAAGTACTCTACTGAATTACAGACTCGA AAAATTAAAAACAAAACCAACCAGAAAATATGAGCCCCAAACAGGAAACA TCAGCCTGAGAAGAAGATGAGACAAAAAAAGAGATACAGACCAGGGATAT ACGACTGTCATTTCTCTCTGTGACAGTATACATGACGGTCATTCATGAAG TCAGAGTTGCTACGCTTTGTGCGGGCGTGCGAGCACTCTACAGTCCGAGG CTTGAGGGGTACGGTGTGTGTGTAGAGAACTTGAACGGTAAATTACGTCC TACAACAATTACAATTCAGGGCGCTTTCGGCTTTCGAAGGCGGGATTGAT GTTTTGGTAGACTTGTGACTTGGATTGCTCCCTCATGAGCTGAACTGTCT CAGAATAAGGCCGTGTCCTTTTGTTCTTTTCGGCACCACCTCGGTGATGC GGCGGATTGTGCTTGTTCGTCGGACTGTCGGCGTATTTCCTGACGACACC AAAGGCGGCACACGTGTGACAGCCCAGGCAACCCCAGCGCGCGAGTTTGC CCATTTTGGGAAGATGCCGGGTAGGGCCGGGCGACATGCATTACAATTTC TTCACATATCGCGGAGCCGCTACGGTACGGTGCGTTCCGTCTTTTCCGTG TTTATTCCGTGTCTGACCCTTATGAGCGAAGTTGTACACCTCGTGATCCC TCCAGTGGGCAAAAGCTTGCCTTCTACAAAATGGGGGGTTGGGCGTTGTC GCCCGATAAAAGCCGAAGATAGTGGGATTCCGCCAGATGCCCATCGATCG TGACTGCCCCCGTCTTGCGACCAGCCTCGGTCGCTTCACGTGGTTTCAGC CAACGACCTTTCCTTACACGGAAGTGTGCGATGCACATATTTACGTCGAG CCGCGGTATCTATCATACTTATCCACTAAAATGCTACCCGTGATCCCACC CGCCGCTCCATACAACCCCAACTCGATTGTTTTTGATCGCCAGGCTGGGA GACAGCGAGGAGGGTTGAGAGGCGTTTCTCAAGATCCGGACCGGCGCCAG AGCGGCGGGGTTGCGTTGGGGTTAGGCAAGTCTGGTGACGTTGTTAGCCG ACGGCGGAGCCAAGAGATACCCTCGGCTAGGGGTCGCGGTCATAGTGGTA CCAGAGACCAGTCTGAGTCTACGGAGAGGAGGGGGCTTTTGTCTCCTATA GGCGAAACGTAGCAGGCTCTTCCGCATCTGCAGGCAATATTTGATAATAT GATAGGTATCTATTTTGTTCCGATCACGCCCCTTTTTGTATTTCGTGCAC TTCGAAAAACATTTTTATATACACCCATACCTAGTATGTCATATCATATA CGGAGTATGTACCAGGTAAAGTTTTATACTAACTTATTTTCGAGCACCGA TCATGTGCAGTGAGTGGACTCGAGTACCACCAACCGCGTTAAATCTGCTC TTTCAGGCTTGTCTTTAACCTGTTATGCTCGTTCCTTTTCTTTGTGTTTG AGAATATTCTCGAGATGTGCCCTTTTACAATTCTTCTTTTCCTTGTGCCC TTTATCCCCAAGTATGTGAACAAGCATGCGAGCATAATGCGGGAAAACCC ATCGAAACGCCTTGCTTAATGGACTGGCATAGGGTATGTTCCGGGCTGTC TCGCATGGAAGGTAGTCGTCGCGATAAAATAGCTATGACGATTGCGTGGC GTGCTCTTCCATTGCTCGCCAATTTTACAATTTTACTACTGTTGTTGCAT GATTGCGCACATGAATGCAAAACTATGCATGGTGGTCGAGATAAAAAGAA TGGACGATGCCGTTGCATGCTCATGAATGCCATAATTCATACCTTCGGCT GTCTGTGGGGCAACGTTTATTTGGTTTCTTGAAAATAGCAACATTCCCTG CCGCCTTGAAAATCGAATTTCGAACAACATGTTCGATACACAGCAGTAGC GC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig163:303827..319878-

>mRNA_P-littoralis_Contig163.39.2 ID=mRNA_P-littoralis_Contig163.39.2|Name=mRNA_P-littoralis_Contig163.39.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2358bp|location=Sequence derived from alignment at P-littoralis_Contig163:303827..319878- (Pylaiella littoralis U1_48)
ATGCTCATACGATGGACTTCCTTGTTTTTCCTGGCTGTTGGCAGCCTCTG
CAGCGACCTTCCAGACAACCAGTTCCAGACTTTGAACTACGGCAACATCG
TGGAGCAGCTCTATGATCTCGCGACTAATTATCCCCACCTAGCCAAGGTT
TACTCGGCTCAGGACAGGTATCAGTTGCCCTCCCCTGGTTCGTGCTCCGA
AGACGGCAGCGTGGAGTGCGAGCAGTGGGTCTTGCACATATCGGACCACA
CGACCTTGGAGGCCGACCCAGAGAGACCGGAGGTGTTCTTCAGCGGGTGC
TTACACGGAGACGAACAGGTGGGACCAACAGCGATCATGGAGACGGCCAA
ACTCATGGTATACGCCGCGATGTGCCACGCCGACTCCTCTGCCAAGGAGT
GCGACAACGAGGTGCTGAGAGCCGCCCCGGAATCGGTCCAATGGTTGGCA
CGGCTAGCCCTAACTCGCAGCACCGTGATCATGCCCATGACCAACTCCAT
CGGGTACCACAAAACCGTCAGGACGGAAAACGGTTTAGACCCGAATCGCG
ATTTCCCGTACCACCAGAAGCCGGAACAGTGCATGACCACAATCACGGCA
AGGGCGGTGAACGAAGTGTGGAGAGAGCACGCCTTTCAGCTGGCGGTCAC
ATTTCACGGGGGCATGGTGGCCGTGGCGTACGAGTGGGGCAGCCCCGACC
ACCCCCACAAGGTGGACAAAAGCGGCAACTGGCAGGACGTGAGCCCCGAC
CACGCCGCCCAGGAGGAGCTCACCGCCGGGCTCAGCCAGTTCTCCGGCGG
CTTCAAAGACGGAGGAAAGACGTTCAAGGCTTATCCCACTGGCCGGATGA
ACGAGCTGGTGTATCCCGTCTCGGGAGGCATGGAAGACTGGGCGTACGCC
GGCTCATGGGGCGATGCGATGGGTGCATGCGAACCGACTGCTAACGGGGG
CTATCCCAAGGAAAAAACGATCTACAACTCGGCCACTCTAAGGGCACTCA
ACATCCTAGTGGAGGCCAGCGACTTGAAGCGCCCTCGCCAGTCCTTGTTG
GGATCTAGGCAGGGGCTGCTCGAAAGCATTCCCTCTCGGGAGGAGCACGC
CAACGGACACGTCGCTAGAAACGTCCGGCTGTCGCTGATGGTGGTGGACC
TGGTGGAGCCGTACGTGGAGTGGGCGCCATTAACGAGAGCTGCAATCGAC
GGCGCGGGAGTGGTGGTTGTGGACGAAGAGCTTGGCGTGGATCTAGAGTG
GACCGTGGGAGGAGCGTTTGAGGTGGACACCACTCAGCTCATTTGGGGAC
CGTGGCCGGAGAATTCTGATACTTTGACGCGCCGAGACTGGGAAGACTTG
GCCGCCGCGGCTAGCGTCCAAAACCAAAGCCCTGCGCAGTCTGGCCGCTC
CAGGTGGAAGAGCAGTGGCGACGACGACAAGGCATCGTCCCCCACCACCT
TCCGAGCAAGGTTCTACCTCGACCTCGACCTCGACCTCGTGAAGCCCCCC
GACGGGGTTGGACTGCGATTGGGGGAGGGCAAGGGCGCTCCTTCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTCCGGCGTTCGTCGTGGCGGTTACAACCG
TCGATCAAGAGTGGGGGTCACGGCTCGTCAAAGGCTGGCCAGACATCGGT
CCACAGAGCCACTTCGTCAACGCGCGGACGTCGGAGGACTGGTTACAAGA
GAACGAGGGCCATATCGTACGGGGACGGCTGCAATGGCTCTCGGTGCCGC
TAAAGGTAGTAACGGCAACGGCAACGGCACCGCCCGAGCCACCGGGACAC
GCTGACGTCAACAACAATACCAAGGGAGATGGCGGACAAGTAGGTTTGGG
AGGCGGTTCCGTTAAGGGGACGGCAACGCCGAGGCCACTGAGTCCCGCCG
CCATCGACAATAAAACGAAGAGGGATGACGCACCAGGAGTGTTGGGAGGC
GGTGACGCTGAGGGGACGGCGGCCCCATTCGAGATGGGCTCGCCCTCGGA
TGTTTCGAAGGAAGGAGAGACGATGAACATACCGGCCTTGGTGGTGATGG
CAGTCATGATGGCCAGTCTTGCCGTGGCCGCGTTCGTGATGCGGACGAGA
GGGGTACGCTTAGGCGGCGGCGGCGGCGGCGGCACCATGGCTGGGAGACA
GCGAGGAGGGTTGAGAGGCGTTTCTCAAGATCCGGACCGGCGCCAGAGCG
GCGGGGTTGCGTTGGGGTTAGGCAAGTCTGGTGACGTTGTTAGCCGACGG
CGGAGCCAAGAGATACCCTCGGCTAGGGGTCGCGGTCATAGTGGTACCAG
AGACCAGTCTGAGTCTACGGAGAGGAGGGGGCTTTTGTCTCCTATAGGCG
AAACGTAG
back to top