mRNA_P-littoralis_Contig1626.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1626.1.1
Unique NamemRNA_P-littoralis_Contig1626.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A7S3MCV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCV7_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 1.140e-124
Identity = 216/437 (49.43%), Postives = 280/437 (64.07%), Query Frame = 2
Query:  782 RCLTFP-PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQR-IVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPS---QSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWSTSQLP 2077
            + L FP P T K +  FLGL+NYFRDH+PDMT   K LR+L+  + K   + W P   ++F   RD+VA CP LFF   N  +VVMTDASDYG+GAYIFQI++ KE PI+F SK+LHGA+LNW+TIEKEAYAIF TL     LLRD KF ++TDHKNLTYIN  SSQKVRRW + +QE++F +EHV G++N VAD+ SRL  +++      P     P          D    +  D   S +    +       +  ++    +++    + + Q +   P+ +   +     ++ PFT A+Y PMEVLNVDTIGP+  DE GN FILV+IDCF+RWVELF  PDTSA +AA+ALL H GR+G P  +RSD+G QF N +I++       + E T AYSKEENAIVERANKEVMRHLRA++YD R    W   QLP
Sbjct:   65 KVLEFPLPRTQKDLQAFLGLINYFRDHIPDMTSHEKPLRALIDTSKKNTTLTWHPLAVEKFHTARDIVARCPALFFVDANATIVVMTDASDYGVGAYIFQIIDGKEKPIIFFSKALHGAELNWATIEKEAYAIFLTLSKFGHLLRDNKFLLKTDHKNLTYINAGSSQKVRRWGIAMQEYDFIIEHVPGKDNFVADSLSRLVANNSPVKPEVPTLALIPEVFPRR--IPDEHYSVISDFHNSTVGHFGVEK-----TLGNIFQGGKKWKGMRKHVRQFIQQCPLCQKLRETHLAIKTRPFTTASYTPMEVLNVDTIGPVDPDEDGNTFILVIIDCFTRWVELFPTPDTSAKSAADALLQHVGRYGAPATLRSDQGSQFVNGIIEEFNKFALIQHEPTLAYSKEENAIVERANKEVMRHLRAIIYDQRSQKCWGKHQLP 494          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A3D2R4B9_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3D2R4B9_9PROT)

HSP 1 Score: 283 bits (724), Expect = 3.210e-78
Identity = 167/439 (38.04%), Postives = 254/439 (57.86%), Query Frame = 2
Query:  794 FP-PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINL-ESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSD-------DSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSET----HQTIHQAMPSLPIDR*SEDPS---QSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
            FP P T   ++ +LGL NYFR+++ D     + LR +V+ N  ++++W       F +++D + N P LFF  +   + + TDA + GIG Y++Q+ E KE+PI F S  L G++L W+T EKEAYA++ ++   + LL D KFTI+TDHKNL Y+N  +SS KV RWKMFLQ+F+FDL+H+ G+ N  AD  SRL   +        + Q +   D       DS+   ED   RI+ ++    + +    +        ++R   ER  +T     + + + +   P  +  +D     +  P+    + PM+ LN+D IGP PKDE GN +ILV ID FSR+VEL  +PD  A T A+A L   GR+G P  + SD  P++ + ++ +L+ L   E   T  YS EEN++VERANKEV+RHL+A+V+D +++  WS
Sbjct:  240 FPLPITSGNLMSYLGLCNYFRENIKDYAKLEEPLRKMVKPNKLEKLIWLQNELDAFKKLKDEIYNMPLLFFIDDKLPIYLNTDACESGIGGYLYQVKEGKEVPIGFYSSKLRGSELQWNTYEKEAYAVYMSVCQFQYLLTDAKFTIKTDHKNLLYMNQNDSSNKVLRWKMFLQQFDFDLQHIPGKENIPADLASRLYEGETQRTINMASFQLANIHDETEMNHMDSI---EDIH-RIEYEKHDEIINQYHNSTVGHHGFERTMRLLKERAHKTWKGMRKNVREFINKCPHCQFMQDVQLKLKLIPYHVMTWRPMDRLNIDHIGPFPKDEQGNVYILVCIDVFSRFVELIPVPDREAVTTAKATLQWIGRYGTPYELLSDNAPEYLSNVMQELLKLADIEHLKTLPYSHEENSVVERANKEVVRHLKAIVFDKKLWPSWS 674          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A418RMC7_9GAMM (Uncharacterized protein n=1 Tax=Methylococcales bacterium TaxID=2304002 RepID=A0A418RMC7_9GAMM)

HSP 1 Score: 276 bits (705), Expect = 2.090e-74
Identity = 167/440 (37.95%), Postives = 243/440 (55.23%), Query Frame = 2
Query:  800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIV-WSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQI-VEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRL-CYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSE-----------THQTIHQA-----MPSLPIDR*SEDPSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
            PTT KQ+  FLGL +YFR H+       + LR+L+      R V WS E    F+ +++ +  CP LFFP +   VVV TDASDYGIG Y+ QI  E KE+PI F+SKSL   +  W+TIEKE +AI  T+K HE LLRD +F ++TDH NL Y+N   SQKV RWKM L  ++FD+E+V G++N VAD FSRL C        G  +     +++      E     ++K  +      ++  +   T     VR  +++  E             Q + Q      M  + +    E P+ +  ++ ++Y   +++N+DT+    +D  G + +LV++D FSRWV+L+ +    A TAA  +LS+CG +G P+ IR+D G Q  N L+ ++      +    T +S EEN IVERANKEV+RHLRA  +D  V   WS
Sbjct:  498 PTTAKQLRSFLGLTSYFRRHIRGYADLERPLRTLLNDTPAGRSVKWSEEARLAFVNLKEAINACPRLFFPDDQLPVVVYTDASDYGIGGYVCQIDAEGKEIPISFLSKSLSKVEQRWTTIEKECWAIIVTIKKHEYLLRDRRFLLKTDHHNLIYMNEPPSQKVMRWKMALLSYDFDIEYVKGEDNVVADTFSRLLCIHMDNTGTGEDSTIEHIATE-----PEQVTLPVRKIPEDKYTIIQSFHN--QTAGHRGVRATIDKLLEHKHKWQGMREHVRQFVRQCSCCQKMSVIKL----ETPTHA--YSLSSYKVGDMINIDTLTVGEEDADGFKHVLVIVDTFSRWVKLYPLRKLDAVTAASCILSYCGDYGSPLAIRTDNGRQLVNSLLKEIYEAGDIKMFVNTPHSHEENGIVERANKEVLRHLRAYCFDGEVRANWS 924          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A349AXA4_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A349AXA4_9ACTN)

HSP 1 Score: 219 bits (558), Expect = 1.300e-55
Identity = 150/438 (34.25%), Postives = 217/438 (49.54%), Query Frame = 2
Query:  800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIK---QRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRL------CYSDATPAKGGPARQRSPSS--------DDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
            P T  Q+  FLG++NYFRD +P +      L  L     K   ++  W  + ++ F   +  +A    L +   +  + + TDA D G GA ++Q+++ ++ P+ F+S +   A+  WST E+EA+A+   +   + LL    F + TDHKNL ++    + KV RW+  L E+NF++ H+AG +NPVADA SRL        S     +   A +R P S        DDSV   E  R  +  +  G +  K  +   +        RPNL++  E    I        I    +D  +S P         E  ++D IGPLP DE GN +I+V ID FSR+V L    D S  + A  LL   G FG P  IR+D G Q+ N LID    L+G ++  T AY  + N  VER NKEV RHLR +  D R  N+WS
Sbjct:  496 PQTKTQLRSFLGMLNYFRDSVPMLGPTVVPLSRLAGPKGKGNFKKGEWQEQHQQAFEAAKAAIAGARLLSYLDYSVPIRLRTDACDIGAGAMLYQVIDGQDRPVSFMSHAFSAAERRWSTFEQEAFAVIKAITHWDSLLLGHPFVVETDHKNLCFLYKSDNPKVVRWRTRLSEYNFEVHHIAGIDNPVADALSRLHPVSISAASSVNALQVAGASKRIPGSTVERPAELDDSV--VETIRY-VHSEVAGHRGVKATV---DKLLRAGHNRPNLQQ--EVEYVIANCGFCQKIANRRQDDDKSQPRFSEIMDVGEEWSLDKIGPLPADEFGNTYIMVAIDGFSRFVVLEPASDASGESVARFLLKLVGWFGRPKGIRTDGGSQYDNHLIDVFCHLLGFDRHVTLAYRPQANGKVERVNKEVGRHLRFICLDRRFENKWS 925          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6B4R9_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B4R9_9EUKA)

HSP 1 Score: 203 bits (517), Expect = 2.640e-50
Identity = 142/429 (33.10%), Postives = 212/429 (49.42%), Query Frame = 2
Query:  797 PPTTGKQMLGFLGLVNYFRDHL-PDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRK---GSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SED--PSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCG-RFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRWS 2062
            PP+T   +  FLGLVN+F D+L  D    +  L  + +    ++  W+ E +  F  +   + + PTL       ++ ++TDASDYG+G  + Q  +DK  P++++SK+L GAQ  W TIEKE YA+ Y L   E+ LR   FTI TDH NLT ++  ++ KV RW + L++F++D+ HV G  N  AD  SR+C           A   S          E+P     K+     G  L+               +R N   +    Q +   +   P+ + +    P  S   T  A  PM+ L +DT+GP P D    Q ILV++D FSR+VE+  I  T+A  AA  +++H   R GVP  I +D G QF N    +L      +  FT  Y  + N IVER N+E+  H+ A   + +  +RWS
Sbjct:  677 PPSTVSGVRSFLGLVNFFHDYLGSDFATISAPLYEITK---HKQFSWTHEAQSAFDTIISRLKSAPTLVHYNPRAKLKLITDASDYGVGGVLLQ--DDK--PLMYLSKALTGAQKRWPTIEKEMYAVVYCLSKAERYLRWAHFTIATDHHNLTRMHQSANAKVARWSLLLEQFSYDVIHVPGIANGAADGLSRVCT----------ALTNS---------EENPHAASIKEHHTLGGLHLSVNRTVQ--------QLRANGHAWPSMRQAVADVISHCPVCQKTVPTRPMSSFDLTLQAPFPMDTLCIDTMGPYPIDGEF-QHILVMVDLFSRYVEMTPIRSTTAEEAASCVVNHWFLRHGVPRRIITDSGSQFKNNTFARLCDRNAVDLHFTAPYHHQSNGIVERVNREINAHMMARRLEIKHLDRWS 1070          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6B8L3_9EUKA (Chromo (CHRromatin Organization MOdifier) domain n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B8L3_9EUKA)

HSP 1 Score: 200 bits (508), Expect = 1.210e-49
Identity = 145/431 (33.64%), Postives = 217/431 (50.35%), Query Frame = 2
Query:  800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKF----TIRTDHKNLTYINLES--SQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPA-RQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSS-PFTRAAYL-PMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYD--DRVYNRW 2059
            P     + G +G  NY    +PD     + L  L +  IK    W+ E +    E+ + VAN   L FP       + TDASD GIG  + Q    +E  + F SK     Q  WST +KE YAI + + T   L    K     T+ +DHKNL +++     S K+ RW++ L E+ F L HVAG++N VADA SRL      P +     RQ+ P         +D R  ++    GS      L + +D           +R+ E      Q +   PI + + +P ++  P+    +  P EV+ +DTIGPLP+  HGNQ+++VVID FS++V+++ +  T A  AAE +   CGR+GVP  I++D+G QF NEL++Q+   +     F+TAY    N IVERAN  ++R LR ++ +  D  +  W
Sbjct:  234 PNNMTDLRGIIGKFNYLARFIPDCQ---RVLAPLYE--IKDMGQWTDEHDGIVRELAETVANAAALVFPDLTKPWQLYTDASDEGIGGVLLQGDPGEEQVVAFFSKKFSAVQGRWSTYDKELYAIVHCV-TQPDLAPLFKLHPDLTVCSDHKNLLFLHKRKDLSAKLERWRIILGEYPFRLRHVAGKDNVVADALSRL------PMETNLLDRQQIP---------DDARALLESLHGGS-AGHVPLAAMQDRAG--------DRWEEIRPFTRQWVEECPICQKAREPGRTRVPWHSTQHRQPFEVVQLDTIGPLPQSPHGNQYVVVVIDAFSKYVDVYPVKSTDAQGAAEVVARVCGRWGVPQTIQTDQGSQFRNELVNQVTTRLTLNHRFSTAYHPASNGIVERANGTLVRALRKLLLEAEDDQWEHW 634          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6EBJ6_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6EBJ6_9EUKA)

HSP 1 Score: 189 bits (481), Expect = 2.120e-47
Identity = 134/418 (32.06%), Postives = 210/418 (50.24%), Query Frame = 2
Query:  800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSSP--FTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSH-CGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDR 2044
            P + K M   +G +NYFRDH+P   G  + +  L Q    +  +   E E+   +V+ L+A    L     + E  +MTDAS  G GA + Q    +  P+ F+SK+    Q  WS  EKEA+AI   +K   + L   KFT+ TD +NL Y++  ++ KVRRW   + +  FD++HVAG +N  AD  SR+               +S S DD            +    G+ L++R +          + R   +  S + +T+ + + + P+ +    P   SP     A   P   + VDT+GP P  + G  +I V+ID  SRW EL     T+ A AA+AL+++   RFG P +++SD GP+F N+L  ++   MG +   TTA+  + N +VERAN++V+R L+A  +  R
Sbjct:    2 PKSVKGMQALVGFLNYFRDHVP---GFAEVVHPLTQAMASKIPLGGDEQEQALRKVKTLLAQAEALAIFDASKEHTIMTDASGLGYGAVLLQ----EGQPVCFMSKAFDQVQSRWSVGEKEAFAIVAAIKRWNKYLSWGKFTLLTDDRNLIYMHKSTNAKVRRWAEAMSDMVFDVKHVAGLDNGGADGLSRVYV------------MQSASEDD---------VEAEHLTAGAHLSRRVV----------TERLKDQGKSVSRETVSKVIENCPVCQVIRRPPVDSPSGLHTAVDRPFRRVAVDTMGPFPSVD-GKAYITVMIDMCSRWTELVASSSTTGAAAADALVNNWILRFGCPEVLQSDGGPEFKNQLFKRIADEMGFKIHITTAHHPQSNGMVERANQQVLRILKARKFQLR 380          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6AS69_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AS69_9EUKA)

HSP 1 Score: 193 bits (491), Expect = 6.390e-47
Identity = 127/424 (29.95%), Postives = 207/424 (48.82%), Query Frame = 2
Query:  800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVEDKELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLESSQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQRSPSSDDSV**TEDPRCRIQKDRKGSQLAKRALWS*EDT*SPASVRPNLERYSETHQTIHQAMPSLPIDR*SEDPSQSSPFTR---AAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVY-NRW 2059
            PT   ++   LG+VNYFR  +P      + + +L + +      W+ E +  F E+R  + +   L  P    ++ + TDASD GIG  +    +   LP+ F SK+L   Q  WSTIE+E +A+   +    + L    FT  TDH+NL ++   ++ KVRRW++ +  ++F + HVAG++N  AD  SRL             RQ   SS             +    +G    K  +           +R     +    Q + + +   P  +  + P++  P+     AA  P  V+ +DT+GPLP    G ++I+V +D F+++ +L+    T+A +A EAL+     FG P  I+SD G Q+ NEL+  L         ++T Y    N IVERAN E++RHLR +++D+R+  +RW
Sbjct:  708 PTNISEVRTLLGMVNYFRPTIPTFADIAEPIIALTRADTP--FAWNSEQQAAFDELRRQLTSGTILTHPRPGDDLHLFTDASDIGIGGVLMVKRDTTFLPVQFFSKTLSATQRRWSTIEQEMFALVSAIDKFSKYLMASHFTAHTDHRNLVWMATSTNPKVRRWRLAVDIYDFTVLHVAGKDNGCADTLSRLLTLSVED------RQEIISS-------------VHGGTEGHLGYKETV---------RRIRDQYSGWRGMVQDVREFITHCPTCQ-LQRPNRPPPYQHHRTAATEPFGVVQLDTLGPLPISPEGFKYIIVAVDTFTKFTKLYPARTTNADSAVEALIDWSAHFGRPREIQSDNGSQYRNELVALLTAAYSIPHHYSTPYRPASNGIVERANAEIVRHLRTLLHDNRMATDRW 1100          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A8J6B2I5_9EUKA (WD repeat-containing protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B2I5_9EUKA)

HSP 1 Score: 187 bits (474), Expect = 5.780e-45
Identity = 147/474 (31.01%), Postives = 224/474 (47.26%), Query Frame = 2
Query:  800 PTTGKQMLGFLGLVNYFRDHLPDMTGRTKSLRSLVQKNIKQRIVWSPELEKEFIEVRDLVANCPTLFFPIENGEVVVMTDASDYGIGAYIFQIVED-KELPILFVSKSLHGAQLNWSTIEKEAYAIFYTLKTHEQLLRDIKFTIRTDHKNLTYINLES-SQKVRRWKMFLQEFNFDLEHVAGQNNPVADAFSRLCYSDATPAKGGPARQ-RSPS---SDDSV**TEDPR--------------------CRIQKDRKGSQLAKRALWS*EDT*SPAS---------VRPNLERYSETHQTI-------------------HQAMPSLPIDR*SEDPSQSSPFTRAAYLPMEVLNVDTIGPLPKDEHGNQFILVVIDCFSRWVELFGIPDTSAATAAEALLSHCGRFGVPVLIRSDKGPQFANELIDQLVLLMGSEQEFTTAYSKEENAIVERANKEVMRHLRAMVYDDRVYNRW 2059
            PTT K+M  F+G+V +FR   P +      L   +    + ++ WSPELE+ F+ V+  V     L     N ++++ TDASD G+G  +    +D +E  +   S++ HGA+  W+T EKEA+AI   ++     L+   FTI TDHKNLTY+  ++ S KV RW++ LQEF+F + H+ G++N VAD  SR    +A  A   P R  R P+    DD V   +                           +D   ++  +R L + E T    S         +  +L RYS T++ +                   H +   L     S D  Q    T     P + + +DT+   P+ E G Q+++ VID F+R+VE++   D SAA+AA+A+    G  G    + SD G +F NE I  LV   G+ Q  T  Y    N   ERAN+ +++ LRAMV +     +W
Sbjct:  405 PTTRKEMRRFIGMVGWFRRFCPKLGEHLAPLNDTLT---QAKVTWSPELEEAFVNVQRGVKAHIKLNHIDYNEDLILRTDASDVGLGGMLCNRTQDGQEAVVAVYSRAFHGAEKRWTTGEKEAFAIVECIRKWRMYLQGYTFTIETDHKNLTYMEQKTASAKVLRWRLALQEFDFHVIHLPGESNVVADTLSRN-LPEAKAAATRPRRHTRRPNRLGDDDFVQIADSEEDTSAEXXXXXXXXXXXXXXXADFTQDAAEARDRERQLATGEMTEERKSEAVTRAHKGMAQHLGRYS-TYRALKEKGYVWRGMWEDVKSFVDHCSCQKLA----SVDQLQLRMGTHMVETPFQKVAIDTLKITPEAESGAQYVVTVIDVFTRYVEIYPSVDKSAASAADAITRWIGNHGPMTTLHSDNGREFINETIAALVARFGTGQSKTFPYHPPSNGGCERANRRILQRLRAMVLEWGEAEQW 869          
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Match: A0A391NS33_9EUKA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Kipferlia bialata TaxID=797122 RepID=A0A391NS33_9EUKA)

HSP 1 Score: 179 bits (453), Expect = 1.350e-44
Identity = 103/285 (36.14%), Postives = 164/285 (57.54%), Query Frame = 1
Query:    1 IRQLCSEFRDIFSVTVKSDPARVPAMDLKVNSDKWHTNKNRGPPRPQSEVRRAAIEKTVKKYLDLGVIEPSQATEYSQVHLVPKGEPNDWRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKKPRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPYFQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFNISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFP-PNYGKTNAGLLGPSELFQ 852
            IRQ+ +++ D+FS  + + PA+     +++ SD    +   GPPR  S   R  ++  ++K L+ G I  SQ+   S + +V K +   WR C+DY +LN  T  + S+P+P   +++  +  KK  VF ++D+TSGYHQAP+S ES A +AF    G+Y ++R+P GL NA  Y+QR M  V L G+LY  C +++DD+ +FG  D EF++NL+ VF R     ++L PKKC LG   V +VG  ++ EGI   + +   +L+   P   K     +G +  F+
Sbjct:   97 IRQIVAKYSDLFSAKLGAKPAKWSPFKIELTSD----DPVGGPPRRLSPPLRREVQAQIEKLLEAGAIRESQSPYSSPLVMVRKKD-RTWRMCVDYRKLNAITRRM-SFPLPRTQELLDLLAHKK--VFAIVDLTSGYHQAPISEESIAKTAFATPDGLYEFVRLPFGLCNAPSYYQREMQRV-LVGLLYKACLVFVDDIVIFGETDEEFLENLERVFARLLANRLTLKPKKCTLGAPKVVYVGMAVSKEGIQIDKSRIQGILDMTEPRDKKQLRSFMGLTNYFR 372          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1626.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3MCV7_9STRA1.140e-12449.43Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A3D2R4B9_9PROT3.210e-7838.04Uncharacterized protein (Fragment) n=1 Tax=Methylo... [more]
A0A418RMC7_9GAMM2.090e-7437.95Uncharacterized protein n=1 Tax=Methylococcales ba... [more]
A0A349AXA4_9ACTN1.300e-5534.25Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
A0A8J6B4R9_9EUKA2.640e-5033.10Uncharacterized protein n=1 Tax=Carpediemonas memb... [more]
A0A8J6B8L3_9EUKA1.210e-4933.64Chromo (CHRromatin Organization MOdifier) domain n... [more]
A0A8J6EBJ6_9EUKA2.120e-4732.06Uncharacterized protein n=1 Tax=Carpediemonas memb... [more]
A0A8J6AS69_9EUKA6.390e-4729.95Uncharacterized protein n=1 Tax=Carpediemonas memb... [more]
A0A8J6B2I5_9EUKA5.780e-4531.01WD repeat-containing protein n=1 Tax=Carpediemonas... [more]
A0A391NS33_9EUKA1.350e-4436.14Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1626contigP-littoralis_Contig1626:884..3609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7070.TC001491-PA
PFAMsBaculo_F,RVT_1,rve
Model size2726
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.05e-36
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38F42@33154|Opisthokonta,3BA5H@33208|Metazoa,3CWAK@33213|Bilateria,41WI3@6656|Arthropoda,3SIRK@50557|Insecta
DescriptionK02A2.6-like
Cds size888
COG categoryO
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789784.7902055-UTR-P-littoralis_Contig1626:883..26461680789784.7902055-UTR-P-littoralis_Contig1626:883..2646Pylaiella littoralis U1_48UTRP-littoralis_Contig1626 884..2646 -
1680789784.8131948-UTR-P-littoralis_Contig1626:3534..36091680789784.8131948-UTR-P-littoralis_Contig1626:3534..3609Pylaiella littoralis U1_48UTRP-littoralis_Contig1626 3535..3609 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789784.802038-CDS-P-littoralis_Contig1626:2646..35341680789784.802038-CDS-P-littoralis_Contig1626:2646..3534Pylaiella littoralis U1_48CDSP-littoralis_Contig1626 2647..3534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1626.1.1prot_P-littoralis_Contig1626.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1626 2647..3534 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1626.1.1

>prot_P-littoralis_Contig1626.1.1 ID=prot_P-littoralis_Contig1626.1.1|Name=mRNA_P-littoralis_Contig1626.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp
MDLKVNSDKWHTNKNRGPPRPQSEVRRAAIEKTVKKYLDLGVIEPSQATE
YSQVHLVPKGEPNDWRFCLDYVRLNEATVGVESWPIPNISQMIQRIGSKK
PRVFGVMDMTSGYHQAPLSAESRALSAFICFMGVYHWLRVPMGLKNAGPY
FQRVMATVVLAGILYVLCELYIDDVFVFGNDDNEFVDNLKEVFLRFRKFN
ISLNPKKCRLGLESVEFVGHVITAEGISFSEEKRLKVLNFPPNYGKTNAG
LLGPSELFQGPPPGYDRKDKEPPQPCSEEHKAEDCMVSRIRERVY*
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mRNA from alignment at P-littoralis_Contig1626:884..3609-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1626.1.1 ID=mRNA_P-littoralis_Contig1626.1.1|Name=mRNA_P-littoralis_Contig1626.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2726bp|location=Sequence derived from alignment at P-littoralis_Contig1626:884..3609- (Pylaiella littoralis U1_48)
ATCCGACAATTATGTTCCGAATTCAGGGACATATTTTCCGTAACGGTTAA ATCGGATCCAGCCAGAGTCCCTGCCATGGATTTAAAGGTAAATTCGGATA AATGGCACACCAATAAGAATAGGGGTCCTCCTAGGCCTCAATCCGAGGTA CGTCGTGCTGCGATTGAAAAAACTGTCAAGAAATACTTAGATCTTGGAGT AATCGAGCCGAGCCAAGCAACTGAATACAGTCAAGTGCATCTAGTACCGA AGGGGGAACCCAACGACTGGAGATTCTGCCTTGACTACGTTCGACTGAAC GAAGCAACAGTGGGAGTGGAAAGCTGGCCGATTCCAAATATCTCCCAGAT GATTCAAAGAATTGGATCGAAGAAACCGAGAGTTTTTGGCGTCATGGACA TGACGTCAGGGTACCACCAAGCACCCTTATCCGCCGAGTCGCGGGCCCTG AGTGCATTTATTTGCTTCATGGGCGTGTATCACTGGCTTAGAGTCCCGAT GGGTCTCAAGAACGCAGGGCCCTATTTCCAACGGGTAATGGCAACTGTAG TTCTAGCCGGTATACTTTATGTGCTGTGCGAACTATACATAGATGATGTC TTTGTATTTGGTAATGATGATAACGAATTCGTAGATAATCTGAAAGAAGT ATTCCTTCGTTTTCGTAAATTTAACATCAGCCTAAATCCCAAGAAATGCA GACTCGGTCTGGAAAGCGTAGAGTTTGTGGGACATGTAATCACAGCAGAA GGAATTTCCTTCAGCGAAGAAAAGCGCCTCAAGGTGCTTAACTTTCCCCC CAACTACGGGAAAACAAATGCTGGGCTTCTTGGGCCTAGTGAACTATTTC AGGGACCACCTCCCGGATATGACCGGAAGGACAAAGAGCCTCCGCAGCCT TGTTCAGAAGAACATAAAGCAGAGGATTGTATGGTCTCCCGAATTAGAGA AAGAGTTTATTGAGGTGCGTGACCTCGTGGCGAACTGCCCGACACTATTC TTTCCCATTGAGAATGGGGAAGTAGTGGTCATGACCGATGCGTCAGACTA CGGCATAGGAGCTTACATCTTCCAAATTGTGGAAGACAAAGAGCTTCCTA TTTTGTTCGTGAGCAAGTCCCTACATGGGGCTCAGCTAAACTGGTCGACA ATTGAGAAGGAGGCATACGCCATTTTCTACACATTGAAGACACACGAGCA GTTGCTACGGGACATCAAGTTCACCATCCGCACGGACCATAAGAACTTAA CATACATCAACCTAGAGAGCTCACAGAAGGTGAGACGATGGAAGATGTTT CTGCAGGAGTTTAACTTCGACTTGGAGCATGTAGCCGGGCAGAACAATCC TGTCGCAGATGCATTTTCAAGGCTATGTTACTCCGACGCAACACCTGCAA AAGGGGGACCCGCGCGACAACGCAGTCCTAGCTCTGATGACTCTGTCTGA TAGACAGAAGATCCCCGATGCAGAATACAGAAAGATCGCAAGGGTTCACA ACTCGCGAAGCGGGCACTTTGGTCTTGAGAAGACACTTGAAGCCCTGCGT CAGTCCGACCAAACCTGGAAAGGTATTCGGAGACACATCAAACAATTCAT CAAGCAATGCCCAGTCTGCCAATTGACAGATGATCGGAAGATCCAAGTCA AAGTAGCCCTTTTACGCGCGCAGCCTACCTCCCAATGGAAGTTCTGAACG TGGACACCATAGGACCACTACCAAAAGATGAACATGGAAATCAGTTCATT TTGGTGGTCATCGACTGCTTCTCTCGATGGGTAGAGCTGTTCGGAATTCC CGATACTTCGGCGGCAACTGCGGCGGAAGCGTTACTATCGCATTGCGGGC GATTTGGAGTTCCTGTGTTGATACGATCAGACAAGGGACCTCAGTTCGCA AATGAATTGATCGACCAATTGGTTCTTTTGATGGGTTCTGAGCAGGAATT CACCACGGCATACTCCAAGGAGGAGAACGCAATAGTGGAACGTGCTAACA AAGAAGTGATGCGTCATTTAAGAGCCATGGTTTATGACGACAGAGTCTAT AACCGTTGGTCGACGTCGCAATTACCCTCGTGATGCGTATCTTGAACTCT CAAGAGAAAGCTCGAACAGGTGTTTCTCCAGCAGAGATTCTGTTTGGAAA TGCAGTAGACCTAGGTCGATACTTACTATATCGCCCGAAGTCTGATCCAA ACCCTGACAGGGACCTTAGTACTTATTTGGAGCAGATGCTCGACCGCCAA AAGACGTTGATAGAAGTGGCACGGGATTCTCAACAAGAGTTCGATTCTCA TCATATGAGTGAGTTCGACCCGGAGTTTACAGATTACCCGCTTCAATCTT ACGTTCTATGGGCCCATCCAGGAGACAAGCGCAGCAAGTTGCATGCGCGA TATCTCGGCCCGTTCCAGGTAGTTGAACGTTCGCAAGATGCGTATAAAAT CCAAGATTTGGTAAGTGGAAAATTGCATGAAACGCATATTTCAACTTAAA ACCGTTCAACTTTGATCCTGAACGGCAGCAACCGCAAGAGGTAGCTCAAC ATAACTCACAGGAGTTTGTGATCTCTGAAATATTGGACCATCGGGGTGAT AGAAATCGCCGTAAAACGATGGAATTCAAAGTAAGGTGGCATGGTTATGA GCCTGAGGATGATTCTTGGGAACCTTATTCTTGCCTAAGAGACACAGAGC AATTGCATACCTATTTACGTGCGCAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1626:884..3609-

>mRNA_P-littoralis_Contig1626.1.1 ID=mRNA_P-littoralis_Contig1626.1.1|Name=mRNA_P-littoralis_Contig1626.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=888bp|location=Sequence derived from alignment at P-littoralis_Contig1626:884..3609- (Pylaiella littoralis U1_48)
ATGGATTTAAAGGTAAATTCGGATAAATGGCACACCAATAAGAATAGGGG
TCCTCCTAGGCCTCAATCCGAGGTACGTCGTGCTGCGATTGAAAAAACTG
TCAAGAAATACTTAGATCTTGGAGTAATCGAGCCGAGCCAAGCAACTGAA
TACAGTCAAGTGCATCTAGTACCGAAGGGGGAACCCAACGACTGGAGATT
CTGCCTTGACTACGTTCGACTGAACGAAGCAACAGTGGGAGTGGAAAGCT
GGCCGATTCCAAATATCTCCCAGATGATTCAAAGAATTGGATCGAAGAAA
CCGAGAGTTTTTGGCGTCATGGACATGACGTCAGGGTACCACCAAGCACC
CTTATCCGCCGAGTCGCGGGCCCTGAGTGCATTTATTTGCTTCATGGGCG
TGTATCACTGGCTTAGAGTCCCGATGGGTCTCAAGAACGCAGGGCCCTAT
TTCCAACGGGTAATGGCAACTGTAGTTCTAGCCGGTATACTTTATGTGCT
GTGCGAACTATACATAGATGATGTCTTTGTATTTGGTAATGATGATAACG
AATTCGTAGATAATCTGAAAGAAGTATTCCTTCGTTTTCGTAAATTTAAC
ATCAGCCTAAATCCCAAGAAATGCAGACTCGGTCTGGAAAGCGTAGAGTT
TGTGGGACATGTAATCACAGCAGAAGGAATTTCCTTCAGCGAAGAAAAGC
GCCTCAAGGTGCTTAACTTTCCCCCCAACTACGGGAAAACAAATGCTGGG
CTTCTTGGGCCTAGTGAACTATTTCAGGGACCACCTCCCGGATATGACCG
GAAGGACAAAGAGCCTCCGCAGCCTTGTTCAGAAGAACATAAAGCAGAGG
ATTGTATGGTCTCCCGAATTAGAGAAAGAGTTTATTGA
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