prot_P-littoralis_Contig162.72.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig162.72.1
Unique Nameprot_P-littoralis_Contig162.72.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length228
Homology
BLAST of mRNA_P-littoralis_Contig162.72.1 vs. uniprot
Match: A0A6H5LF20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF20_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 2.950e-54
Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 0
Query:    2 GLSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMPSDWMLSRASRGNDIELFVSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGEDGHI-EEGVVTVWVAVLKYVTAGRGNLRKEDTVTGFDVFMLRSKLSFFPVAAIRRVVHIVHDCPATGASACGLVSDGNNRSVWQCKLDKRSRYLLNGYFHSIVRDPI 199
            GL H++V  FNHWG AP  A+ G G +RG  V+DAGR  S W  S ASRG+D+E++++A   R+G  G+  TT+GK  FFFEH GN  R  ++ ++  EG  T+W+AV +YVTAG GN  +    TG   F +R  L+F+P  AIRRVVH++H CP +G SACGLV +   +  W+C L   S YLLN YFHS  RD I
Sbjct:  230 GLVHDSVEVFNHWGGAPGEANAGTGTVRGCPVKDAGRH-SGWTRSTASRGSDVEIYLTANDQREGRYGLEQTTLGKVAFFFEHQGNPWRRDDESNVLPEGEYTIWMAVSEYVTAGVGNNLQLHHTTGLAEFKMRHTLTFYPTPAIRRVVHMMHACPTSGESACGLVRESKRQ--WRCNLLGTSTYLLNKYFHSPGRDSI 425          
BLAST of mRNA_P-littoralis_Contig162.72.1 vs. uniprot
Match: A0A6H5JRL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL1_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.100e-18
Identity = 75/222 (33.78%), Postives = 102/222 (45.95%), Query Frame = 0
Query:    3 LSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMP--SDWMLSRASRGNDIELFVSAAAARDGTA-GVGHTTIGKAIFFFEHIGNDQR-SGEDGHIEEGVVTVWVAVLKYVTAGRGNLRKEDTVTGFDVFML--RSKLSFFPVAAIRRVVHIVHDCP------ATGASACGL----VSDGNNRSVWQCKL--------DKRSRYLLNGYFHSIVRDPIV 200
            L    + C  +  + P+ AS G+G+LRGG  + A R+    DW L +  +GND+E+F       D  +  V   T+ K I+FF+H GN    SGE         T WV    YV  G GN R  D+VT      L  R +   +PV AIRR VH+ H CP      ++ +  CG      S G +R VW  +         +   RYLLN   HS  +D  V
Sbjct:  191 LESTLIECSRYM-RVPQVASCGVGRLRGGDAKAAARVGPRDDWALGQ-GQGNDVEIFNKPPPTGDDVSPSVDDLTMSKIIYFFDHKGNKNSFSGEPRPS-----TWWVLAYDYVGIGNGNERVPDSVTRHPTLSLQGRGRPKVYPVQAIRRQVHMYHQCPQHSDVGSSTSQICGESQGPYSGGRDR-VWHHRFRLALPGSRNGYDRYLLNEVHHSTNQDTFV 404          
BLAST of mRNA_P-littoralis_Contig162.72.1 vs. uniprot
Match: A0A6H5JZ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ87_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 4.390e-18
Identity = 60/182 (32.97%), Postives = 80/182 (43.96%), Query Frame = 0
Query:   19 EAASGGMGKLRGGSVEDAGRM--PSDWMLSRASRGNDIELF-VSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGEDGHIEEGVVTVWVAVLKYVTAGRGNLRKEDTVTGFDVFMLRSK--LSFFPVAAIRRVVHIVHDCP-----ATGASACGLVSDGNNRSVWQCKLDKRSRYLLNGY 190
            +  S   G+L+GG V+ A R   P DW L +  +G+D+++F +       G       T+ K I+FF H GN          E    T WV    YV  G GN R  D++TG     LR +     +PV AIRR VH+ H CP     A G+  CG         VW+ K         NGY
Sbjct:    5 QVVSCSQGRLKGGDVKAAARPGPPDDWALGQ-GQGDDVKIFNIPPPTGDHGPPPADQLTLSKIIYFFLHRGNKNSLSS----EPPPFTWWVLAYDYVGVGHGNERVPDSITGHPTLSLRGRGRPKVYPVHAIRRQVHMYHQCPQGQDGAEGSRLCGETKGAGRDRVWRLKFRLALPGSSNGY 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.72.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LF20_9PHAE2.950e-5449.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRL1_9PHAE3.100e-1833.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ87_9PHAE4.390e-1832.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig162contigP-littoralis_Contig162:468989..470042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig162.72.1mRNA_P-littoralis_Contig162.72.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig162 468925..470044 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig162.72.1 ID=prot_P-littoralis_Contig162.72.1|Name=mRNA_P-littoralis_Contig162.72.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp
MGLSHNTVWCFNHWGQAPEAASGGMGKLRGGSVEDAGRMPSDWMLSRASR
GNDIELFVSAAAARDGTAGVGHTTIGKAIFFFEHIGNDQRSGEDGHIEEG
VVTVWVAVLKYVTAGRGNLRKEDTVTGFDVFMLRSKLSFFPVAAIRRVVH
IVHDCPATGASACGLVSDGNNRSVWQCKLDKRSRYLLNGYFHSIVRDPIV
FQVIFNPRSGMGQPEAAVVEIPTSCSL*
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