prot_P-littoralis_Contig1.90.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.90.1
Unique Nameprot_P-littoralis_Contig1.90.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length218
Homology
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BLAST of mRNA_P-littoralis_Contig1.90.1 vs. uniprot
Match: D7G5U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U8_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.450e-23
Identity = 56/138 (40.58%), Postives = 83/138 (60.14%), Query Frame = 0 
Query:    1 MSPLVTTALTVLRNESNTENWFTFSQHLNALVRKSFAFGLLDDRELLDQLQFRGDDMVEQGGHPAAVLRVFSEMLPNKRHISRETTFWDRGKLRDINKLHS----ASTAVSGAAHGYPGPSHLAAHHAARVAASSTVP 134
            M+PL TTALT LR E   E+W++F  H++A++ K    GL+  R +LD   +RG+DM+ Q G P  V  +F++++PN R+ISRETT  DR +L+ I+ +      A+T  +    GY G    AA  A+ +AA  T P
Sbjct:  181 MNPLPTTALTPLRTEKGKEDWYSFKPHVDAIIAKGVTLGLMTWRSMLDDFVYRGNDMLLQFGVPEKVFGIFTDLMPNARNISRETTLRDRSRLKAIDTISGGWKLAATLATAHLSGYAGAYQQAASQASTIAAGITAP 318
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.90.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5U8_ECTSI1.450e-2340.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:559082..559735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.90.1mRNA_P-littoralis_Contig1.90.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 559080..559806 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.90.1 ID=prot_P-littoralis_Contig1.90.1|Name=mRNA_P-littoralis_Contig1.90.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp
MSPLVTTALTVLRNESNTENWFTFSQHLNALVRKSFAFGLLDDRELLDQL
QFRGDDMVEQGGHPAAVLRVFSEMLPNKRHISRETTFWDRGKLRDINKLH
SASTAVSGAAHGYPGPSHLAAHHAARVAASSTVPQPRGRGSSVRGGGGRY
SSAGTSVSLPFTPSILPPPPRADALPIKEALPAVTGGVHPLHPRPLPTLR
PPTGKGTRTNSGRTSRP*
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