mRNA_P-littoralis_Contig162.51.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI) HSP 1 Score: 904 bits (2335), Expect = 3.700e-304 Identity = 540/975 (55.38%), Postives = 650/975 (66.67%), Query Frame = 2
Query: 533 WPRGRDILLADVAAAXXXXXXXXAEG-GLDAEEAVKAVLEKHPLSLDQAMKAVTPHEGNGEGEGAGRRTAFFTNIAHNGSAYVARAWAEVYSTVLPPVKTSEACTVGFSTCC--AEDPRRFLPGMSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSA---------------------AVTVSTGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGELSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVDRLFDVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVSLPTAVLTVWRRANFTGMSLTFAVIGSSAVAALHVLLLQYVAMAFWAQSGLALLVSSMRELAVSLVGGGGNRSSEADDHPRRRSRLGA--ADSLGSLSDGGGGTGGVGDAVDAAKMFGDDAGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGATVAEIWAYLENPSTTAGLARRHDERAQAATREHVIGVRHHLDAAGKERGEKVLTALAAVDANVRAIAAEV 3379
WPRGR IL AA AEG GL++ AV AVL +PL + M+A+ P +G G T FF +IAH G+ + + AWAEV+S L P SEACT GF C + LP MSV FAYGA VDPKDLI LA +L L+++K+CFLGGL+FVDNPFIPG+SLSVA+EESLKNA +RE L ALQ+ +DDL+ VLDR+P+TIA FPG V GCE V EPE+A V+RDR FRGPLRLALQERQFS+TLCI+PL+F+YM +RFVAGLP++QD+NDLL R XXXXXXXXXXXX A + + GRKGRDFLY +GFVA A +LLQGLGWT G A+ L P + P +WE IFSGT LPGAQFVL+G+LT+P +YYKVP MRMLLGFYVH+I L LYTAV LE DDGELS +E+ LTF+V AEIVSNL+QM A F+E+ +DKWNWLE LSL LLAGGL +R+ +SDVH GRALFALSAPLVFSR+LFFGQ L+RQGLVIQMM ILFGEM+QF LVLGTIMMGFTVSF+ALF+E +YG+VWLDVFKAMLGEV VF ++Y+ +VYR+VA+VLLVVYL VVAVMLLNLLIAVLSTEHAKV++QQD AFRESKVRI+KL+ R+VD D+LPSPFNL Q+ + L+ GVD L +TC + +R+F VG FWL LG P IL AWGLWA S P AVLT WRRA +TG SLT AV SS V LHV L +V FW +SGL L +++ LA +L GG G PRR S G+ A + GS S D + A + +A G G++VAEIWA LENP+ GLA+ E+ Q T E +I R+HLD AG+ RGE VL L +VDA+++ AE+
Sbjct: 69 WPRGRHILGGAAPAAAAA-----AEGEGLESFRAVAAVLGNYPLPRNDGMEALRPTDG-----GDITTTRFFRDIAHRGNRHSSWAWAEVFSKSLLPRDMSEACTQGFKACPQGSNPAHDLLPAMSVFFAYGAVVDPKDLIALAEILKLEEMKDCFLGGLSFVDNPFIPGLSLSVALEESLKNAPERESRCLEALQKAMDDLLRAVLDRLPQTIASFPGGVGGCESVLEPEVAGVLRDRDFRGPLRLALQERQFSKTLCIAPLMFKYMCYRFVAGLPDLQDSNDLLGGREEKRTRTSFETSGPVRAPVASAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSGTRRGRKGRDFLYSDGFVAGSATERLLQGLGWT-GRRAAAALTPP-PERPSDWETIFSGTFLPGAQFVLVGILTKPLAYYKVPVMRMLLGFYVHLITLALYTAVALESDDGELSNTEIALTFHVMAEIVSNLLQMRAGFVEFWRDKWNWLESLSLLLLAGGLTIRIRNSDVHQGRALFALSAPLVFSRVLFFGQFLKRQGLVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALFEEAKSYGDVWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNLPQIAVGLVARGVDGLLGTKTCPKIMREFSVGVFWLTLGSPAILIAWGLWAASAPMAVLTAWRRATYTGRSLTVAVACSSVVVVLHVFALPFVLSWFWVRSGLGLAALTLKTLAAALCGGNGGEDGSGRRVPRRPSAAGSGGASTAGSPS-------ACSDVIVADMLRRGNASPGGRHAA----------------------------------GSSVAEIWAQLENPTMPDGLAQGQGEQNQTVTLEEIIRARNHLDEAGRGRGEAVLALLKSVDADLKDQIAEL 990
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: A0A6H5JX68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX68_9PHAE) HSP 1 Score: 533 bits (1374), Expect = 3.060e-168 Identity = 308/566 (54.42%), Postives = 370/566 (65.37%), Query Frame = 2
Query: 533 WPRGRDIL--LADVAAAXXXXXXXXAEG-GLDAEEAVKAVLEKHPLSLDQAMKAVTPHEGNGEGEGAGRRTAFFTNIAHNGSAYVARAWAEVYSTVLPPVKTSEACTVGFSTCC--AEDPRRFLPGMSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTV-------------STGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQG---------------PREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGELSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQ 2131
WPRGR IL A AA A+G GL+ AV AVL+ HPL +D +A+ EG G T FF +IAH G+ + + AWAEV+S L P SEACT GF C + LP MS+ FAYGA VDPK+L L+ +L L+++K+CFLGGL+FVDNPFIPG+SLSVA+EES KNA +RER L ALQ+ +D L+L VLDR+P+TIA FPG V GCE V EPE+A V+RDR FRGPLRLALQERQFS+TLCI+PL+FEYM +RFVAGLP++QD+ DLL RR XXXXX + GRKGR FLY +GFVA A +LLQGLGWT + P R+G P +WE +FSGT LPGAQFVL+G+LT+P +YYKVP MRMLLGFYVH+I L LYT V LE DD ELS +E+ LTF+V AEIVSNL+QM A F+E+ +DKWNWLE LSL LLAGGL +R+ + DVH GRALFALSAPLVFSR+LFFGQ L+RQGLVIQ
Sbjct: 72 WPRGRHILGYAAPAPAAA-------AKGEGLERFRAVAAVLDNHPLPMDDGKEALRQAEG-----GDITTTRFFRDIAHRGNRHSSWAWAEVFSKSLLPRDMSEACTQGFKACLQGSTPAHDLLPAMSLFFAYGAVVDPKNLTALSEILKLEEMKDCFLGGLSFVDNPFIPGLSLSVALEESFKNAPERERRFLEALQKAMDALLLAVLDRLPQTIASFPGGVGGCESVLEPEVAGVVRDRDFRGPLRLALQERQFSKTLCIAPLMFEYMCYRFVAGLPDLQDSTDLLGRREERRTRTSLQSSGPVRAPVASAASVSSVCTDGXXXXXXXXXXXXXXXXXXXXXPPLGTRRGRKGRGFLYSDGFVAGSATERLLQGLGWTGRRAAEALTPPPERRGGLPIDVTLCRSDVLVPSDWETVFSGTFLPGAQFVLVGILTKPLAYYKVPVMRMLLGFYVHLITLALYTTVALESDDAELSNTEIALTFHVMAEIVSNLLQMRAGFVEFWRDKWNWLESLSLLLLAGGLTIRIDNRDVHQGRALFALSAPLVFSRVLFFGQFLKRQGLVIQ 625
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 383 bits (983), Expect = 1.030e-106 Identity = 244/599 (40.73%), Postives = 340/599 (56.76%), Query Frame = 2
Query: 896 MSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTG-GRKGRDFLYDNGFVASH--APGKLLQGLGWTEGLEKASRLGIPFRQGPREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGELSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVDRLFDVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVS 2683
+S L Y D DLI L+R + + L+ CFL +A DNPF+PG++LS+A +S A + ER L +LQE +D L+LE+L+R+P+T+ F G ++GC VFEPE++ R GPLRLALQERQ +T C PL+ +++S RF GLP ++DT ++L R + + G++G+ L D+ + +P LLQG A+ G+ W S T LPGAQF + G++ P YY+VPAMRMLL V++ MLV ++ VVL +DG L+ E FY+ A I++ +M +F Y D WN L+ L L L+ GGL VR D D GRAL+ALSAPL+FSR+LFF Q+LR G +IQ++ + E+++FG+V+ +M+GF +SF ALF + +G L +FKAMLGEV F + GN Y +VA L V+YL+V+AVMLLNLLIAVLST H+KVE + D+ F+ SK RII+ + +VD +LP PFNLVQL+L L + DR +A G FWL LGP LW +S
Sbjct: 534 LSCLLQYPTMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDA-RGLPGPLRLALQERQHVQTFCTQPLLTDFLSRRFTYGLPGLRDTQNILGDRRELTNLARGGPGELMSGQKYLALDEEGRRKEDGRSLDRCLLLDLQDKIGQEGK--LLDSRKIIDTLLSPCILLQG---------ANCAGL--------WNTAVSLTFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFFSTVVLFHEDGPLTPGEAAFAFYILAGIITEGQEMRRDFGLYAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALYALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGS-FPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLS 1111
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 336 bits (862), Expect = 5.220e-90 Identity = 225/675 (33.33%), Postives = 343/675 (50.81%), Query Frame = 2
Query: 836 ACTVGFSTCC------AEDPRRFLPGMSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGELSG-SEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDS-DVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVDRLF--------------------------------------DVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVSLPTAVLTVWRRAN 2722
A + STCC ED R L ++ L GA+ K L+ L+ ++ LKE LG ++ +NPFIPG++LSVA + + A + E+ L ++Q +D+L+LEVL+ MP+T+ F G + C +FEPE + R ++GPL + L +R+ ET C PLV ++M+ +F GLP+++DT +L L + GF + G LL EG K G+ ++G + S T PGA+F++ G L+RP SYYKVPA+RM L +I M++++ V+ + G+ S E+ T Y+ I++ ++ + EY++D+WN L+ SL+LL GG R+ D RAL+ALSAPL F+RILFF QIL QG +IQ+M + G + +FG+++ +M+GF SF++L++E AYGEVW +F+A LGE D + G + VA VLLVVYL+++ +M+LNLL+AVLST HAKV+ ++ ++ R+I+ + +V+ D LP PFNL Q + L +D F D + A FG FW MLGP +L W LW +S+ A + VW+ +
Sbjct: 875 ALSSSLSTCCNNLSLPVEDAR--LSVLAYLLQQGAKPTNKGLLRLSNLVKFPRLKESLLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPE-TVISRFHGYQGPLHVVLSKREQMETYCTIPLVLDFMTRKFTKGLPSLRDTEGVL---------------------------------------------------------LSNKGFTQTLYGGGLL-----AEG--KVFFFGMALQRG-YAGGALSSITYFPGARFIIAGFLSRPGSYYKVPALRMCLDLVTYISMMIIFGGFVILHEAGDTSDWLEIVFTMYIFGGILTEFREILEDPWEYMRDQWNLLDVTSLTLLLGGAIQRMYGQVDDESSRALYALSAPLAFARILFFAQILPSQGPMIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDD-FSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALPFMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMISIVKAPVVVWQTSG 1480
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: A0A6H5JXT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT0_9PHAE) HSP 1 Score: 306 bits (783), Expect = 8.980e-89 Identity = 210/473 (44.40%), Postives = 265/473 (56.03%), Query Frame = 2
Query: 2132 MMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVDRLFDVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVSLPTAVLTVWRRANFTGMSLTFAVIGSSAVAALHVLLLQYVAMAFWAQSGLALLVSSMRELAVSLVGGGGNRSSEADDHPRRRSRLGAADSLGSLSDGGGGTGG----VGDAVDAAKMFGDDAGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGATVAEIWAYLENPSTTAGLARRHDERAQAATREHVIGVRHHLDAAGKERGEKVLTALAAVDANVRAIAAEVVAEKGGGVASAXXXXXXXXGSVEGFTRDSSSSSSLLELIEEKVAEVVERSVAP 3538
MM ILFGEM+QF LVLGTIMMGFTVSFFALFQE+ +YGE WLDVFKAMLGEV VF + Y+ +V+R VA+ LLV+YL VV +MLLNLLIA VRI+KL+ R+VD D+LPSPFNL Q+ + L+ GVD L +TC + +R+F VG FWL LG P IL AWGLWA S+P AVLT WRRA FTG SL+ AV SS V LH+ L +V + FW +SGL L +++ LA +L GG G RR S G+ GGG T G D V A + +A +G G++VAEIWA LENP+T GLA+R DE+ Q T E +I HLD AG+ RGE VL L +V+A+++ + +AE VA SVE + +S+ L+E +VA+ VE S P
Sbjct: 1 MMTILFGEMLQFALVLGTIMMGFTVSFFALFQEDKSYGETWLDVFKAMLGEVSVFAENYEDSVHRYVARFLLVLYLTVVTIMLLNLLIA---------------------VRIMKLYVRIVDSDVLPSPFNLPQIAVGLVAKGVDGLLGTRTCPKIMREFSVGVFWLTLGAPAILIAWGLWAASVPAAVLTAWRRATFTGRSLSVAVAYSSVVVILHLFALPFVLVWFWVRSGLGLAALTLKTLATALCGGNGGEDGSGTRVSRRPSAAGS---------GGGPTAGSPSVCSDVVVADMLRRGNASTGGRHAA----------------------------------GSSVAEIWAQLENPTTPDGLAQRQDEQDQTVTVEEIIHALDHLDEAGRGRGEVVLALLKSVNADLK----DQIAELEQSVAR----------SVENLRVE--LEASVASLVEAEVAKAVEESRGP 393
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 303 bits (777), Expect = 2.240e-81 Identity = 219/629 (34.82%), Postives = 316/629 (50.24%), Query Frame = 2
Query: 869 EDPRRFLPGMSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNA-TDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWE--RIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGELSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQE---EHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVDRLFDVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVSLPTAVLTVWRRANFTGMS 2737
EDP R G+S+L +G + P DL+ L R + ++L EC +A N FIP ++LS A +++++A ++R+R L LQ +D ++ E LDR+P+T+ G ++ C + EPE A RGPL AL T +PL +M +F GLP + D + +L S V G + L PG +L G +P R G WE R+ T PGA F+ GV+ P SYYKVP MRM L V L +T+ VL + G L+ +EM YV A I+ +MW + Y+ D+W L+L + R +DSD GR L+A+ +PL++ R+L++ Q++ QG IQ++ + E+ QF +V+G +++GF +SFFALF++ E G + LD F+AMLGEVG+F D + G + A VLLV YLLV+ +MLLNLLIAVLST H KVE+ R S+ R+ + +V D LP+PFNL QLV+ L VD LF T A R G FWL+LGP IL +W VS P A+ + R+ + + +S
Sbjct: 419 EDPLR---GLSMLLQHGTKPHPADLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLDRLPQTVCGLSGGMAACTALLEPEEADDSSTYGERGPLARALGCPHRIVTFATTPLCMNFMLLKFTRGLPALNDGHSVL------------------------------------ILEKSRLDVREEAKGHESLTAL---------CPGSILGGF-------------LP-RVGKLLWEDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALDATVFTAALAFFTSRVLLFEKGSLTIAEMAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDSDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLRGAL-LDAFQAMLGEVGLFDD-FVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLFKSNTYPIARRGVGRIVFWLVLGPGAILGGIFVWLVSTPKALFAICRKRSLSILS 981
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 298 bits (762), Expect = 5.450e-80 Identity = 210/626 (33.55%), Postives = 316/626 (50.48%), Query Frame = 2
Query: 869 EDPRRFLPGMSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNA-TDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWE--RIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGELSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQE---EHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVDRLFDVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVSLPTAVLTVWRRANFT 2728
EDP R G+S+L +G + P DL+ L R + ++L EC +A N FIP ++LS A +++++A ++R+R L LQ +D ++ E L+R+P+++ G ++ C + EPE+A RGPL AL T +PL +M +F GLP ++D + +L S + G + L PG +L G +P R G W+ R+ T PGA F+ GV+ P SYYKVP MRM L + L +T+ VL + G+L+ +E+ YV A I+ +MW + Y+ D+W L+L + R +D D GR L+A+ +PL++ R+L++ Q++ QG IQ++ + E+ QF +V+G +++GF +SFFALF++ E G + LD F+AMLGEVG+F D + G + A VLLV YL+V+ +MLLNLLIAVLST H KVE+ R S+ R+ + +V D LP+PFNL QLV+ L VD LF T A R G FWL+LGP IL +W VS P A+ +W + + +
Sbjct: 328 EDPLR---GLSMLLQHGTKPHPTDLVILCRAIDYEELDECLFQAVASAKNSFIPSLNLSFAFRDAIRSAASERDRRVLARLQHDVDSILTETLNRLPQSVCGLSGGMAACTALLEPEVADDSSTYGERGPLARALGCTHRIVTFATTPLCMNFMLLKFTRGLPALKDGHSVL------------------------------------ILEKSRLDIREEAKGHESLTAL---------CPGSILGGF-------------LP-RVGKLLWDDDRLAPLTFFPGAHFIATGVVALPNSYYKVPLMRMALEAMIFTAALAFFTSRVLLFEKGQLTIAEVAFAIYVVAAIMLEATEMWKDLAGYLLDRWKAPHFLALVVALAAFLARAIDPDSSWGRGLYAVGSPLMYWRLLYYAQVIPSQGSTIQVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIRGAL-LDAFQAMLGEVGLFDD-FVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLFKGNTYPIARRGVGRIVFWLLLGPGAILGGVFVWLVSTPKALFAIWGKRSLS 887
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI) HSP 1 Score: 299 bits (766), Expect = 6.190e-79 Identity = 193/556 (34.71%), Postives = 295/556 (53.06%), Query Frame = 2
Query: 791 AEVYSTVLPPVKTSEACTVGFSTCC------AEDPRRFLPGMSVLFAYGAEVDPKDLIDLARVLTLKDLKECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVSGCEVVFEPEIAAVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTGG--RKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVLEDDDGE-LSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDS-DVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVE 2428
+E L + ++A + ST C ED R L ++ L +GA+ K L+ L ++ LKE LG ++ DNPFIPG++LSVA + + A + E+ L ++Q +D+L+LEVL+ MP+T+ F G + C +FEPE + R ++GPL + L +RQ ET C PLV ++MS +F GLP+++DT +L + T+ G +GR F + S+A G L S T PGA+F++ G+L+RP SYYKVPA+RM L +I+M++++ V+ D G+ E+ T Y+ I++ ++ + EY++D+WN L+ SL+LL GG+ R+ D RAL+ALSAPL F+RILFF QIL QG +IQ+M + G + +FG+++ +M+GF SF++L++E YG VW +F+A LGE F D + G + VA LLVVYL+++ +M+LNLL+AVLST HAKV+
Sbjct: 612 SEAMGKFLSAYQMTDALSSSLSTGCNNLSLPVEDAR--LSVLAYLLQHGAKPTNKGLLRLCNLVKFPRLKESLLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRDCSAIFEPE-TVISRFHGYQGPLHVVLSKRQQMETYCTIPLVLDFMSRKFTKGLPSLRDTEGVLLNNTSF----------------------------------TEPGQTLYGDGLLAEGRVFFFGMALQRSYAGGTLS------------------------------SITYFPGARFIIAGLLSRPGSYYKVPALRMCLDLVTYILMMIIFGGFVILHDAGDTFDWMEIVFTMYIFGGILTEFREILDDPWEYMRDQWNLLDVASLTLLLGGVIQRMYGQVDDQSSRALYALSAPLAFARILFFVQILPSQGPIIQVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTTYGVVWKAIFRATLGETDYFDD-FSGTTFDGVATALLVVYLVLLTIMMLNLLVAVLSTAHAKVD 1099
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 278 bits (710), Expect = 3.240e-72 Identity = 212/643 (32.97%), Postives = 307/643 (47.74%), Query Frame = 2
Query: 905 LFAYGAEVDPKDLIDLARVLTLKDL-KECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGRVS--GCEVVFEPEIA-AVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVL--------------EDDDGELSGSEMFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWLLLTGVD-------------------------RLF-------DVQTCRQAIRKFGVGTFWLMLGPPTILTAWGLWAVS 2683
L A A +L L+R D+ K C L + NPFIPGV+LS+ + E+ K A++ ER L + ++D+++LE+ +R+P+T+ F + C V EPE+ A GPL + + + ET C PL+ +++S +F GLP++ DT LL+ F ++G P LL E L K R GI W+ + T LPGAQF++ ++ P YY+VPAMRMLL F V++ M+ + VL D LS L F A +M Y +D+WN L+ L + L GL +R D G A +ALSAPLV +R+LFF QIL+ QG ++Q++ + ++QFG V+ +M+GFT++ +F++ +G+ L +FKAMLGE G F D + G Y VA +L+VVYL +V VMLLNLLIA+LSTEHA+V++ AF+ SK RII + +VD D+LP+PFNLVQL+L L + + RLF Q R A R FG +WL+LGP + LW +S
Sbjct: 497 LIANSARPSASELKGLSRKAASGDVFKRCCLRAVTSAANPFIPGVTLSIRLTEAAKQASEGERRALFETKSSIDEMLLEMFERLPQTVRGFEEQAGTDSCTNVLEPELMRAQSGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHQLWYLEEDGL------------------------------------------FRDEHGLGLDGIPVALL------EALLKGVRQGI--------WDNTPTLTFLPGAQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAALSYFVLFHSTTGSDPGLDGIADHRFSLSEGACALIFITAGAYREGR-EMKRGIRAYFKDQWNVLDALGMLFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFQGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFF-DEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLS 1081
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 276 bits (707), Expect = 1.650e-71 Identity = 208/642 (32.40%), Postives = 312/642 (48.60%), Query Frame = 2
Query: 905 LFAYGAEVDPKDLIDLARVLTLKDL-KECFLGGLAFVDNPFIPGVSLSVAIEESLKNATDRERPNLTALQETLDDLILEVLDRMPKTIAEFPGR--VSGCEVVFEPEIA-AVIRDRQFRGPLRLALQERQFSETLCISPLVFEYMSHRFVAGLPNIQDTNDLLRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAAVTVSTGGRKGRDFLYDNGFVASHAPGKLLQGLGWTEGLEKASRLGIPFRQGPREWERIFSGTVLPGAQFVLIGVLTRPASYYKVPAMRMLLGFYVHIIMLVLYTAVVL-----EDDDG-------ELSGSE-MFLTFYVAAEIVSNLVQMWANFLEYVQDKWNWLECLSLSLLAGGLFVRVVDSDVHVGRALFALSAPLVFSRILFFGQILRRQGLVIQMMAILFGEMIQFGLVLGTIMMGFTVSFFALFQEEHAYGEVWLDVFKAMLGEVGVFQDLYDGNVYRNVAKVLLVVYLLVVAVMLLNLLIAVLSTEHAKVEQQQDRAFRESKVRIIKLFGRMVDGDILPSPFNLVQLVLWL--LLTGVDRLFDVQTCRQ------------------------------AIRKFGVGTFWLMLGPPTILTAWGLWAVS 2683
L A A L +L+R D+ K C L + NPF+PGV+LS+ + E+ K A++ ER L + ++D+L+LE+ +R+P+T+ F + + C V EPE+ A GPL + + + ET C PL+ +++S +F GLP++ DT LL+ F ++GF + P LL L K R GI W+ T LPG QF++ ++ P YY+VPAMRMLL F V++ M+ + ++ VL E D G LS SE ++ A +M Y +D+WN L+ L + L GL +R D G A +ALSAPLV +R+LFF QIL+ G ++Q++ + ++QFG V+ +M+GFT++ F++ +G+ L +FKAMLGE G+F D + G Y VA +L+VVYL +V VMLLNLLIA+LSTEHA+V + AF+ SK RII + +VD D+LP+PFNLVQL+L L ++ + F ++ R+ A R FG +WL+LG + LW++S
Sbjct: 514 LIANSARPSASALKELSRKAASGDIFKRCCLRAVTSAANPFVPGVTLSIRLSEAAKQASEGERRALFDTKSSIDELLLEMFERLPQTVRGFEEQAGMDSCTNVLEPELMRATTGSNDLGGPLDMIISDPLQLETFCKVPLIMDFLSSKFTLGLPDLMDTAGLLKNEHHLWYLEEDGL------------------------------------------FRDEHGFGSDGIPVALLAA------LLKGVRQGI--------WDNTPILTFLPGTQFIVAAMVAAPTKYYEVPAMRMLLDFVVYVGMVAVLSSFVLFHSTTESDSGLDGIVAHRLSLSEGACALIFITAGAYREGREMKRGIRAYFKDQWNVLDALGILFLFVGLVIRWDDWTSTWGPAFYALSAPLVVARVLFFAQILQFHGPMVQVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIF-DEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLS 1098 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.51.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig162.51.3 >prot_P-littoralis_Contig162.51.3 ID=prot_P-littoralis_Contig162.51.3|Name=mRNA_P-littoralis_Contig162.51.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1135bp MSEADSDEGRSPAVGSTKTPAEAVAAPAASEREIAPAVVGEGKEDTMKTSback to top mRNA from alignment at P-littoralis_Contig162:331686..353159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig162.51.3 ID=mRNA_P-littoralis_Contig162.51.3|Name=mRNA_P-littoralis_Contig162.51.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=21474bp|location=Sequence derived from alignment at P-littoralis_Contig162:331686..353159+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig162:331686..353159+ >mRNA_P-littoralis_Contig162.51.3 ID=mRNA_P-littoralis_Contig162.51.3|Name=mRNA_P-littoralis_Contig162.51.3|organism=Pylaiella littoralis U1_48|type=CDS|length=3405bp|location=Sequence derived from alignment at P-littoralis_Contig162:331686..353159+ (Pylaiella littoralis U1_48)back to top |