prot_P-littoralis_Contig162.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig162.42.1
Unique Nameprot_P-littoralis_Contig162.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length140
Homology
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BLAST of mRNA_P-littoralis_Contig162.42.1 vs. uniprot
Match: D7FMF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF4_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 3.910e-45
Identity = 98/140 (70.00%), Postives = 111/140 (79.29%), Query Frame = 0 
Query:    1 MRLSTSILVIICCQAVALFNVGYAFVVSKSSIQRAAFLSEGRERALRADITDQLERIVDGPVVDLRGGKTT-RKKGKESSTSAAXXXXXXXXXXMKKGPKKPSFVTTIKAFFQSLINPNFVLKLKAKKEKHNTVHGSGSA 139
            MRLST+  VIICC A A  N  +AFVVSKSSI+RA  LSEGRE A+ A +  Q+E++VDGPVVDLRGGKTT  KKGKESS    XXXXXXXXXX  K    PSF+ TIKAFFQSL+NP+F LKL+AKKE+HNTVHGSGSA
Sbjct:    1 MRLSTAASVIICCHAAATLNSSHAFVVSKSSIRRAGALSEGRESAVAATM-GQMEQVVDGPVVDLRGGKTTGSKKGKESSAKXXXXXXXXXXXXXXK----PSFIATIKAFFQSLVNPHFALKLQAKKEQHNTVHGSGSA 135
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BLAST of mRNA_P-littoralis_Contig162.42.1 vs. uniprot
Match: A0A6H5KGU7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU7_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.600e-19
Identity = 48/74 (64.86%), Postives = 55/74 (74.32%), Query Frame = 0 
Query:    1 MRLSTSILVIICCQAVALFNVGYAFVVSKSSIQRAAFLSEGRERALRADITDQLERIVDGPVVDLRGGKTTRKK 74
            MRLST    IICC A A  N  +A VVSKSSI+RA  LSEGRE A+ A + DQ+E++VDGPVVDLRGGKTT  K
Sbjct:    2 MRLSTVSSAIICCHAAATLNSSHALVVSKSSIRRAGALSEGRESAVAAAM-DQMEQVVDGPVVDLRGGKTTGSK 74
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF4_ECTSI3.910e-4570.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGU7_9PHAE5.600e-1964.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig162contigP-littoralis_Contig162:221522..225228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig162.42.1mRNA_P-littoralis_Contig162.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig162 220744..226292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig162.42.1 ID=prot_P-littoralis_Contig162.42.1|Name=mRNA_P-littoralis_Contig162.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=140bp
MRLSTSILVIICCQAVALFNVGYAFVVSKSSIQRAAFLSEGRERALRADI
TDQLERIVDGPVVDLRGGKTTRKKGKESSTSAAKGKSSKTSKSMKKGPKK
PSFVTTIKAFFQSLINPNFVLKLKAKKEKHNTVHGSGSA*
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