mRNA_P-littoralis_Contig162.40.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig162.40.2
Unique NamemRNA_P-littoralis_Contig162.40.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 832 bits (2150), Expect = 6.340e-276
Identity = 450/615 (73.17%), Postives = 475/615 (77.24%), Query Frame = 1
Query: 1099 RRQTKPLDTPTKDACGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAFHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAA-----FTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMNAAAMISSGQGAVLGNPQAVRQPAVRSEGRREKSSLE 2928
            RRQ   +  P      +  DAGFKP V G+MIEALTGERPN RAIQNHAA HGRRRTPYDANELLQRVKDATADGGK+LLKM TEGRMTHIFWMTA+QVALSIKYG V LYDD AVKNKYRLPVGIGAVIDGEYFTRVAF MISSDTQAETF W+ME+WMETRGGEGPDVFIQDAD ACTLAA+KVFKGAKKLRCLW LWKNVKEKLGSILGKDFAA        D R + G      +  +  +L    PK    L    +        F  L   V  F  + V+   RIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALP VAM GVDDVWFG++FMAPIRFGLGMWP RFMT+EMEAAAIFC GG+AVLEG ERLEALGKLEFLGELIVGVETVAVV+ESRDGRVMR                                               HWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPT VVGDTW AIPE+ATIET LQRVAQTGQS QDRRLL+VEMLKKATAAVSSGVQLVPPDTMRAIVQTFE+SMNAAAMISSGQGAVLGNPQAVRQPAVRSE +   + LE
Sbjct:    7 RRQEAEVKQPENKM--QYEDAGFKPAVQGKMIEALTGERPNTRAIQNHAAAHGRRRTPYDANELLQRVKDATADGGKYLLKMGTEGRMTHIFWMTASQVALSIKYGHVRLYDDTAVKNKYRLPVGIGAVIDGEYFTRVAFQMISSDTQAETFEWMMESWMETRGGEGPDVFIQDADGACTLAANKVFKGAKKLRCLWRLWKNVKEKLGSILGKDFAASFRQRLPEDARPVVGDRHGGIVRGALRQL----PKGGGLLAETVQRSSPLGGGF--LCADVQCFVVH-VQPSRRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPAVAMPGVDDVWFGQRFMAPIRFGLGMWPLRFMTIEMEAAAIFCVGGNAVLEGGERLEALGKLEFLGELIVGVETVAVVMESRDGRVMR-----------------------------------------------HWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTVVVGDTWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPDTMRAIVQTFESSMNAAAMISSGQGAVLGNPQAVRQPAVRSEAQPHLNLLE 565          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE)

HSP 1 Score: 748 bits (1932), Expect = 1.160e-257
Identity = 367/414 (88.65%), Postives = 383/414 (92.51%), Query Frame = 1
Query: 1531 SDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVP 2772
            SDTQAETF W+MEAWMETRGGEGPDVFIQ+AD ACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFT+DF+KM GRL ETG EESFEELC+NF KAE+YLRHLYKDRHRWAAAFSVLTFSVSSFTS+RVEG+NR+MKKVCGAMTSLQGVFEFFEGAIEKQEDRALLR ARLALP VAMAGVDDVWFG KFMA IRFGLGMWPFR+MT+EMEAAAIFCGGG AVLEGDER EA  KLEFLGELIVGVETVA V+ESR GRVMRYI+ SMQDGSHICSCRTLQELGLCCRH WQAMRLSPKFKFHVG+LNRHWLTEQGLRELEAWPPECK QWMVALV+SDASKDDQVRPPTA+VGDTW AIPENATIET LQRVAQTGQSSQDRRLLFVEMLKK T     G    P
Sbjct:   93 SDTQAETFEWMMEAWMETRGGEGPDVFIQEADGACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTNDFQKMGGRLSETGFEESFEELCINFAKAENYLRHLYKDRHRWAAAFSVLTFSVSSFTSSRVEGINRVMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRTARLALPAVAMAGVDDVWFGDKFMALIRFGLGMWPFRYMTMEMEAAAIFCGGGGAVLEGDERFEAPSKLEFLGELIVGVETVAAVMESRYGRVMRYIVCSMQDGSHICSCRTLQELGLCCRHFWQAMRLSPKFKFHVGILNRHWLTEQGLRELEAWPPECK-QWMVALVNSDASKDDQVRPPTAMVGDTWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTTCRELWGAACSP 505          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE)

HSP 1 Score: 634 bits (1635), Expect = 1.060e-207
Identity = 349/774 (45.09%), Postives = 465/774 (60.08%), Query Frame = 1
Query:  706 TPTAGSPACSAEALSARLAVIPLEGSVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCKMKVRLPTTRTWP------------SLRWSTITQWTRAFVDEVRRQTKPLDTPTKDACGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAF-HGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGG-GDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAV-----------------VGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMNAAAMISSGQGAVLGNPQAVRQPAVRSEGRREKSSLEYG 2934
            +PT      SA+AL   L  IP +  +  + +AV + C+E GV  +   S  +K++ GGRLV+  L C H MP R+K    G   N  K RKS SQRT C  K+ +     WP            ++    +    +   D  + Q  PL TP K    KLTDAG KP     +IEAL   R + R +QN         R+        +RV+  T DGG + +K+D  GR++H+FWMTA Q+AL+ +YG VLLYDD AVKN+YRLP+G+G VIDGEYF+R+ F  ++ DT A TF WV+E +   RG   PD+F+QDADAA  LAADKVF  A+K RC+WHL +N+ + L  +LG  F AF   F K RGRL E+G EE + +L   FPKA++Y+ +LYKDR RWA   SVL FS +S+T+NRVE MN   K+V  +  SL  VF+F   AIEKQ  RA LR+A+L LP V+       WFG     P +F LG+W ++FM  E+   A FC    +A+LEG  R +ALGK E++G ++V VETVAV++E+ DG   RYI+  M DGSH+CSCRTLQELGLCCRH W AMRLS ++KFHVG+LN+HWL EQG +    WP   KP W VAL H   S+ ++  P  A                   G  W A   N TIE+SL ++ +TG + QDRR L+V+ LK+ATAAVS GV+ VPP+ +RA+V+ F+  ++ A+ I S  G  + NP  VR P  R  G+R+++S E G
Sbjct:   98 SPTKEKWVYSADALRRDLENIPTQEDIPQLVSAVKDVCEEHGV--KMAVSTSTKEKGGGRLVSTTLLCVHGMPLRKKTASSG---NNTKSRKSDSQRTGCGCKINIR----WPIKTDVYKHPRLTTMELEHLHAVDKEAADVQQAQKGPLTTPMKATSAKLTDAGLKPAAQAVVIEALHDRRVHPRTMQNDDDIVRTHTRSTLKTCCRRRRVQACTKDGGVYKVKLDENGRLSHLFWMTAEQIALASRYGSVLLYDDTAVKNRYRLPLGLGVVIDGEYFSRIVFQSLTVDTTAVTFEWVLEEFKAARGA-APDMFLQDADAAMGLAADKVFPDARKRRCMWHLGQNLMKNLKKVLGSAFQAFLDQFYKTRGRLTESGFEEEYAKLVETFPKAKEYMAYLYKDRERWAVYSSVLVFSAASYTTNRVESMNAQAKRVLNSQASLVRVFKFLSDAIEKQAARAELRSAQLRLPSVSTPDTATYWFGAALTTPCKFALGVWAYKFMMDEVAMCATFCSSPSNALLEGASRDDALGKFEYIGMMVVNVETVAVIVENHDGTDKRYIVLGMTDGSHLCSCRTLQELGLCCRHFWAAMRLSRRYKFHVGILNQHWLAEQGRKPTSEWPEGAKPTWAVALNHKALSEGEKQAPLVATGRLQCATEGDEGGGGAGAGVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGG 859          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 2.460e-124
Identity = 276/748 (36.90%), Postives = 390/748 (52.14%), Query Frame = 1
Query:  781 SVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQG-DAANGAKKRK-SSSQRTNCKMKVRLPTTRTWPSLRWSTITQ---WTRAFVDEVRRQTKPLDTPTKDACGKLTDAGFKPTVPGRMIEALTGERP---NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHS------DASKDDQVRPPTAVVGDTW*A-IPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMNAAA-----MISSGQGAVL--GNPQAVRQPAVRSEGRREKSSLEY--GGAR 2943
            +++DV   VV  C   G +     S + +  A  R+    L C     +RQ EY    D A G ++R    S RT+C   VR   +  WP +    +T      R  +D   R    L         ++T  G KP    + ++ L  +     N RA+QN AA  HG  + P DA +  + V  ATADGG   +KMD  GR+THI+W T  QVAL  +YG V LYDD AVKN+YR+P+G+ AVID EY TR+   +I++DT  +TF  ++++ +E+RGG+ PD+FIQDADAA T A  +VF  A   RCLW+L +N+ + L  +LG D   F  +FR +R +L     E  F  L   +PKAE Y+R +Y DR RWA   S L FSV S+T   VEG N ++K  C + +SL  V ++F G I  Q+D A+LR A   LP   M       F K  +    F +  WP RFM  EM AA +FC  G   ++G ER  ALG+ LE++   +  V  V  + E RDG+   Y++    DGSH+C CRTLQ LGL CRH+W AM  SP+F+FH      HWLTE+      + WP   +P+W+V+  +       D +  +         G  W + +  + T++T L  + + G + QDR++L+ ++ KK   A S       P    A+V  F T +N  A       + G+GA L   NP  +R PA  S  RR  +   Y  GG++
Sbjct:   81 TLEDVEEEVVRLCVGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKRSARTDCP--VRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVQQMTSHGMKPKEVTKAMKVLHEDSDIDINKRAVQNAAATVHGAEK-PRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDTFLSMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWYLNQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMRVVYDDRARWAEYVSPLVFSVGSWTX--VEGQNALIKDKCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMVAPPATAF-KSVLESCEFSIASWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAALGRTLEYIEGKLCDVINVFGIHEQRDGKAFDYLVLLFSDGSHLCQCRTLQTLGLFCRHVWAAMMHSPRFRFH------HWLTEKARGTPQQDWPDVARPRWVVSXSNRHAAGEVDGAAGEGEGEGVGGCGGRWKSFVGSSQTVQTVLLDLKEKGPTYQDRKVLYADVTKKLGQAASILSDRFSPTVAVALVDQFLTMVNMQAGGVGTTTTGGRGAALFMANPGTLRLPARTSNKRRPGAVERYTRGGSK 816          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5K3E8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E8_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 1.560e-114
Identity = 204/460 (44.35%), Postives = 274/460 (59.57%), Query Frame = 1
Query: 1219 NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFC--GGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHSDASKD 2583
            N RA+QN AA  HG  + P DA +  + V  ATADGG   +KMD  GR+THI+W T  QV L  +YG V LYDD AVKN+YR+P+G+ AVID EY TR+    I++DT  +TF W++++ +E+RGG+ PD+FIQDADAA T A  +VF  A   RCLWHL +N+ + L  +LG +     H   ++       G E  F  L    PKAE Y+R +Y DR RW    S L FSV  +T++ VEG N ++K  C + +SL  V  +F G I  Q+D  +LR A   LP   M       F K  +    F +  WP RFM  EM AA +FC  GGG+A  +G ER  ALG+  E++   + GV  V  + E RDG+   Y+I    DGS++C CRTLQ LGL CRH+W AM  SP+F+FHVG+L+ HWLTE+      + WP   +P+W+V+  H+    D
Sbjct:   13 NKRAVQNAAATVHGAEK-PRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVVLWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGEMKTAFHGRVQVCASAAVIGKERKFNALIEKHPKAEKYMRVVYDDRARWVEYVSPLVFSVGLWTTSSVEGQNALIKDKCNSRSSLLDVATYFSGIIRSQKDAPMLRDAIDHLPPNRMVAPPATAFKKSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEA--DGPERAAALGRTFEYIEGKLCGVIYVFRIHEQRDGKAFDYLILLFSDGSNLCQCRTLQTLGLFCRHVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHAAREVD 469          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 3.370e-111
Identity = 214/538 (39.78%), Postives = 301/538 (55.95%), Query Frame = 1
Query: 1141 CGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAFHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHS----DASKDDQVRPPTAVVGDTW*A-IPENATIETSLQRVAQTGQSSQDRRLLFVEMLKK 2733
            CG L   G   T P R             A    A  HG  + P DA +  + V  ATADGG   +KMD  GR+THI+W T  QVAL  +YG V LYDD AVKN+YR+P+G+ AV+D EY TR+    I++DT  +TF W++++ +E+RG + PD FIQDADAA T A  +VF  A   R LWHL +NV + L  +LG     F  +FR +R +L     E  F  L   +PKAE Y++ +Y DR RWA   S L FSV S+T++RVEG N +++  C + +SL  V ++F G I  Q+D A+LR A   LP   MA      F K  +    F +  WP RFM  EM AA  FC  G   ++G ER  A G+  E++ + +     V  + E RD +   Y++    DGSH+C CRTLQ L L CRH+W AM  SP+F+FHVG+L+ HWLTE+      + WP   +P+W+V+  H+    D +  +            W + +  + T++T L  + + G + QDR++L+ ++ KK
Sbjct:  110 CGSL--CGLPCTSPPRTATTAADIDHQPSAGNAAAIVHGAEK-PRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTKEQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVVDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGKQ-PDTFIQDADAAMTAAVREVFPDALARRNLWHLNQNVIKALAKVLGGYMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMQVVYDDRARWAEYVSPLVFSVGSWTTSRVEGQNALIRDRCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMAAPPATAF-KSVLESCEFSIAGWPRRFMEQEMTAAITFCQMGGGEVDGPERAAASGRTFEYIEDKLCDAIYVFGIHEQRDDKAFDYLVLLFSDGSHLCQCRTLQTLRLFCRHVWAAMMYSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHAAREVDGAAGEGEGEGVGGCSGRWKSFVGSSQTVQTVLLDLKEKGPTDQDRQVLYADVTKK 642          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5L482_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L482_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 8.050e-111
Identity = 199/235 (84.68%), Postives = 202/235 (85.96%), Query Frame = 1
Query:  313 MSLMDLLQDCGDDDDAGSDMDVCIGSDPPAAVPAAVFGGTDSLPAGGTSLAPQEDEAQGAGDEARGAMDGTLDLITNAQSKNGSGGDGVRPLGEAAEQGEAPGTPQRAEGXXXXXXXXXXXXXXXXXXXXXTPTAGSPACSAEALSARLAVIPLEGSVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCKMKV 1017
            MSLMDLLQDCGDDDDAGSDMDVCIGSDPPAAVPA VFGGT+SLPAGGTSLAPQEDEAQGAGDEARGAMDGTLD ITNAQSK  SGGDG+RPL EAAEQGE   TPQRAEG                     TPTAGSPA SAEALSARLA+IPLEGSVDDVAAAVVEACQEFG V RRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNC MKV
Sbjct:    1 MSLMDLLQDCGDDDDAGSDMDVCIGSDPPAAVPA-VFGGTNSLPAGGTSLAPQEDEAQGAGDEARGAMDGTLDPITNAQSKTVSGGDGIRPLREAAEQGETSDTPQRAEGGAAGPAPPEASGR--------TPTAGSPAYSAEALSARLAIIPLEGSVDDVAAAVVEACQEFGAVMRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCNMKV 226          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 1.270e-105
Identity = 199/457 (43.54%), Postives = 276/457 (60.39%), Query Frame = 1
Query: 1147 KLTDAGFKPTVPGRMIEALTGERP---NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQG 2502
            ++T  G KP    + ++AL  +     N RA+QN AA  HG ++ P DA +  + V  ATADGG   +KMD  GR+THI+W T  QVAL  + G V LYDD AVKN+YR+P+G+ AVID EY TR+    I++DT  +TF W++++ +E+RGG+ PD+FIQDA AA T A  +VF  A   RCLWHL +N+ + L  +LG D   F  +FR +R +L  T  E  F      +PKAE Y+R +Y DR RWA     + FS+ S+T++R+EG N +++  C + +SL  V ++F G I  Q+D A+LR A   LP   MA      F K  +    F +  WP RFM  EM AA +FC  G   ++G ER  A G+  E++   +  V  V  + E RDG+   Y++    DGS +C CRTLQ LGL CRH+  AM  SP+F+FHVG+L+ HWLTE+ 
Sbjct:  483 QMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAKK-PRDAADSYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRCGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDAVAAMTAAVREVFPDALARRCLWHLKQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLTKFERKFNAFIEKYPKAEKYMRVVYDDRARWAEYVPPVVFSLGSWTTSRIEGQNALIRDKCNSRSSLLDVAKYFSGTIRSQKDAAMLRDAIDHLPPNRMAAPPATAF-KSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAASGRTFEYIEGKLCDVIYVFGIHEQRDGKAFDYLVLLFSDGSRLCQCRTLQTLGLFCRHVLAAMMHSPRFRFHVGLLHEHWLTEKA 937          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JFD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD7_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 5.930e-84
Identity = 190/540 (35.19%), Postives = 258/540 (47.78%), Query Frame = 1
Query: 1342 MDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFA---------AFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMN-----AAAMISSGQGAVL--GNPQAVRQPAVRSEGRR 2910
            MD  GR+THI+W +  QVAL   YG V LYDD AVKN+YR+P+G+ AVID EY TR+    I++DT   TF W                   DAD A T A  +VF  A   RCLWHL +N+ + L   LG             AF  +FR +R +L     E  F  L   +P+ E Y+R +Y DR RWA   S L FSV S+T++RVEG N ++K  C + +SL  + ++F G I  Q+D A LR A   LP   MA        K  +    F +  WP R M  EM AA ++C      ++G ER  A  +  F                        Y++    D SH+C CRTLQ LGL CR +W AM  SP+F+FHVG+L+ HWLTE+     L  WP   +P+W       +  +D                   + T++T +  + + G + QDR++++  + KK   A S       P    A V  F  ++N     A A  + G+GA L   N   VR PA  S  RR
Sbjct:    1 MDDSGRLTHIWWQSREQVALWNGYGHVTLYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVW-------------------DADVAMTAAVSEVFPDALWRRCLWHLHQNIMKTLAKDLGGQMKVCSTVCVGMAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTSRVEGQNALIKDKCNSRSSLLDMAKYFSGIICSQKDAAALRDAIDHLPPARMATPPTTAL-KSVLESCEFSIAAWPRRLMEQEMTAAIMYCQMDGGEVDGPERAAASRRTTF-----------------------DYLVLLFSDVSHLCQCRTLQTLGLFCRQVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPLHDWPDVARPRWEKWTGRRERERDGG-------------GGXSSQTVQTVVLDLKEKGPTDQDRQVVYANVTKKLGQAASILSDKFSPTVAVARVDQFLATVNVQAGGAGATTTGGRGAALFMANSGTVRLPARTSNKRR 484          
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 1.880e-82
Identity = 218/662 (32.93%), Postives = 312/662 (47.13%), Query Frame = 1
Query:  745 LSARLAVIPLEG-SVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQG-DAANGAKKR-KSSSQRTNCKMKVRLPTTRTWPSLRWSTITQWTRAFVDEVRRQTK-----PLDTPTKDACGKLT----DAGFKPTVPGRMIEALTGERP---NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKD---------------------------------------FA-AFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRD-GRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMV 2553
            L  +L  +  EG +++DV   VV  C   GVV     S + +     R+    L C     +RQ E+    D   G  +R +  S RT C+ +V +   ++ P  + + +       VD      K      L    +    K+T    + G KP      I+AL  +     N RA+QN AA  HG  + P DA +  + V   TADGG   +KMD  GR+THI+W T  Q+AL                N+YR+P+G+ AVID EY TR+    I++DT   TF W++++ + +RGG+ PD+FIQDAD A T A  +VF  A   RCLWHL++++ + L   LG                                         FA AF  +FR +R +L     E  F  L   +P+ E Y+R +Y DR RWA   S L FSV S+T+ RVE     ++ +C   ++ + +     G       R L     L  P  A          K  +    F    WP R M  EM AA +FC      L+G ER  ALG+  E++ + +  V  V  + E RD GR   Y++    DGSH+C CRT Q LGL CRH+W AM  SP+F+FHVG+L++HWLTE+     L+ WP   +P+++V
Sbjct:   18 LKTKLEAVQTEGKTLEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEK-PRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQMALW---------------NRYRMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQMKVCSTVCVGMAGSSCAEALTQATPTSPASFRGRSACSCFAQAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTPRVE-----VQLLCRESSAPRRMHP--RGVTLSTTCRLL---EWLLQPTTAF---------KSVLESCEFSFAAWPRRLMEQEMTAAIMFCQMDGGELDGSERAAALGRTFEYIEDKLCDVIYVFGIREHRDDGRTFDYLVLLFSDGSHLCQCRTFQTLGLFCRHVWAAMMYSPRFRFHVGLLHQHWLTEKARGTPLQDWPDVARPRFVV 644          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWW3_9PHAE6.340e-27673.17MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5JBU5_9PHAE1.160e-25788.65SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JJG6_9PHAE1.060e-20745.09SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JUZ2_9PHAE2.460e-12436.90SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K3E8_9PHAE1.560e-11444.35SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LU83_ECTSI3.370e-11139.78SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L482_9PHAE8.050e-11184.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LMZ3_9PHAE1.270e-10543.54SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JFD7_9PHAE5.930e-8435.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNB0_9PHAE1.880e-8232.93SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig162contigP-littoralis_Contig162:213492..220551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LU83
Preferred nameFHY3
PFAMsFAR1,MULE,SWIM
Model size3726
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0007154,GO:0007165,GO:0007602,GO:0007623,GO:0008150,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009639,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010017,GO:0010018,GO:0010218,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042752,GO:0042753,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051606,GO:0051716,GO:0060255,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071490,GO:0080090,GO:0104004,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons9
Evalue6.06e-111
EggNOG OGs2CMBY@1|root,2QPXR@2759|Eukaryota
DescriptionMULE transposase domain
Cds size2559
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig162.40.2prot_P-littoralis_Contig162.40.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig162 214590..220482 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789782.3240128-UTR-P-littoralis_Contig162:213491..2145891680789782.3240128-UTR-P-littoralis_Contig162:213491..214589Pylaiella littoralis U1_48UTRP-littoralis_Contig162 213492..214589 -
1680789782.4347703-UTR-P-littoralis_Contig162:220482..2205511680789782.4347703-UTR-P-littoralis_Contig162:220482..220551Pylaiella littoralis U1_48UTRP-littoralis_Contig162 220483..220551 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789782.3341868-CDS-P-littoralis_Contig162:214589..2152721680789782.3341868-CDS-P-littoralis_Contig162:214589..215272Pylaiella littoralis U1_48CDSP-littoralis_Contig162 214590..215272 -
1680789782.3475516-CDS-P-littoralis_Contig162:215560..2157591680789782.3475516-CDS-P-littoralis_Contig162:215560..215759Pylaiella littoralis U1_48CDSP-littoralis_Contig162 215561..215759 -
1680789782.3575544-CDS-P-littoralis_Contig162:216271..2166251680789782.3575544-CDS-P-littoralis_Contig162:216271..216625Pylaiella littoralis U1_48CDSP-littoralis_Contig162 216272..216625 -
1680789782.3670623-CDS-P-littoralis_Contig162:216928..2170211680789782.3670623-CDS-P-littoralis_Contig162:216928..217021Pylaiella littoralis U1_48CDSP-littoralis_Contig162 216929..217021 -
1680789782.378009-CDS-P-littoralis_Contig162:218162..2183051680789782.378009-CDS-P-littoralis_Contig162:218162..218305Pylaiella littoralis U1_48CDSP-littoralis_Contig162 218163..218305 -
1680789782.3873227-CDS-P-littoralis_Contig162:218519..2186611680789782.3873227-CDS-P-littoralis_Contig162:218519..218661Pylaiella littoralis U1_48CDSP-littoralis_Contig162 218520..218661 -
1680789782.3953776-CDS-P-littoralis_Contig162:218905..2189611680789782.3953776-CDS-P-littoralis_Contig162:218905..218961Pylaiella littoralis U1_48CDSP-littoralis_Contig162 218906..218961 -
1680789782.406148-CDS-P-littoralis_Contig162:219205..2194491680789782.406148-CDS-P-littoralis_Contig162:219205..219449Pylaiella littoralis U1_48CDSP-littoralis_Contig162 219206..219449 -
1680789782.4191084-CDS-P-littoralis_Contig162:219837..2204821680789782.4191084-CDS-P-littoralis_Contig162:219837..220482Pylaiella littoralis U1_48CDSP-littoralis_Contig162 219838..220482 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig162.40.2

>prot_P-littoralis_Contig162.40.2 ID=prot_P-littoralis_Contig162.40.2|Name=mRNA_P-littoralis_Contig162.40.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=853bp
MYRRRPCAVYPYLHAALANKNVHDSNASRTTHRETPFQTQYSSETPQHKT
TAPGHTARARVDHTAQQQRNTACARVDHTADMSLMDLLQDCGDDDDAGSD
MDVCIGSDPPAAVPAAVFGGTDSLPAGGTSLAPQEDEAQGAGDEARGAMD
GTLDLITNAQSKNGSGGDGVRPLGEAAEQGEAPGTPQRAEGGAPQRAGGG
AAGPAPPEASGRTPTAGSPACSAEALSARLAVIPLEGSVDDVAAAVVEAC
QEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGA
KKRKSSSQRTNCKMKVRLPTTRTWPSLRWSTITQWTRAFVDEVRRQTKPL
DTPTKDACGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAFHGRRRT
PYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGR
VLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVME
AWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKL
GSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYK
DRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEG
AIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRF
MTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIES
RDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVG
MLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGD
TW*
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mRNA from alignment at P-littoralis_Contig162:213492..220551-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig162.40.2 ID=mRNA_P-littoralis_Contig162.40.2|Name=mRNA_P-littoralis_Contig162.40.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7060bp|location=Sequence derived from alignment at P-littoralis_Contig162:213492..220551- (Pylaiella littoralis U1_48)
TGTAAACCCAGAGCGCGCGGGGCTCAATTTCGAGAAACGCGGTGGAATGC ATCGTGTCAGCGTGTGGGTATGTATCGTAGACGGCCGTGTGCTGTCTACC CCTATTTGCACGCCGCACTTGCAAACAAAAACGTGCACGACTCGAACGCC TCCAGAACCACACACCGAGAAACCCCTTTTCAAACTCAATACAGCAGCGA AACACCACAGCACAAGACCACCGCACCAGGCCACACAGCACGCGCAAGAG TAGACCACACAGCACAACAGCAGCGAAACACAGCATGCGCAAGAGTAGAC CACACAGCAGACATGTCCCTGATGGATCTCCTACAAGATTGCGGAGACGA CGACGACGCCGGCAGTGATATGGACGTGTGTATAGGAAGCGACCCTCCCG CCGCCGTGCCGGCGGCGGTGTTCGGAGGAACCGATAGCCTTCCGGCTGGC GGCACCTCCTTGGCACCCCAAGAGGACGAAGCACAAGGGGCCGGTGACGA AGCACGAGGGGCTATGGATGGTACGTTAGACCTTATCACTAACGCTCAGA GCAAAAACGGTTCTGGTGGCGATGGCGTAAGACCTCTTGGTGAAGCAGCA GAACAAGGAGAGGCGCCCGGCACACCACAGAGGGCGGAGGGAGGCGCACC ACAGAGGGCGGGGGGAGGCGCAGCTGGCCCAGCTCCTCCTGAGGCTAGCG GGCGTACACCAACGGTGAGGACGTGACAGCAGATGATAATCAAAGCTGGA GTACTCTGGGCCTTCGCTGGGCCTTCGACGGTCGCGCTTCTGTTCGCCAA ACAAACGCCGGTGCATTTTGCCTGCACGGTCAAGTGCTTCTGCTGCTGCT GTACTCGTTGTGCTGCTGTGCTGCTGATAACTGCTGTGTGTTGCCTTCAA AGCTTGCCACCAAATTAAACGCCAATGTATAAAGACTGAACGGCCAGGTG CTGCTGCTGCTGCTGCTACTGCTGCTGTGTAGTGTATGGCCCTCCGGCCG CATCTGCACCCATATGGCACGGCACTGGTGCATTTCTCTGATGTTGGAAA CTGCCTTCGATCCTGCTGTCGGTCGGGCGTATGCTGCGTGATGCGGTTTC AGGCTGGCAGTCCGGCGTGCAGTGCCGAAGCACTGTCCGCAAGGCTTGCC GTCATTCCTCTCGAGGGGAGCGTCGACGACGTGGCGGCCGCAGTGGTGGA AGCATGCCAGGAGTTTGGAGTAGTGACGCGACGCTGCGACTCCAAGAAAA GCAAGAAAGAAGCTGGCGGTCGTCTGGTGGCGGTTGGACTAGCGTGCAAG CACGCCATGCCGAATCGCCAGAAGGAGTACAGGCAGGGAGATGCAGGTGA GGTCCTCCAAACCTATACCTTGTCCGTGCGCGCACATGTGTGTGGGCATT TTGTGGTAGTTTGAGCTGGTCGGAAACGACGGTCGCGTAGGAAAAAGGAC AATGTTATTGTTTGGGCAGACATAGGGATGAGTTGTGCCGCTCGAAACCG GCAACGACCTGTCGAAGGCGTAATCGTGTTCTGTCCCTATCGCTTGTTGT GTTTTGCGCTGGGCGTACCACGTCGCATGTGCATCATCAGCGAACGGCGC CAAGAAACGGAAGTCCAGCAGCCAGAGAACAAACTGCAAAATGAAGGTGA GAGAAGTGTACCGTGCACGTGGGTTATTGGTCCGTGGTGTGCGCGCGGGC TGTTGGTCCGTGAAAAGTAGGATAGCCGATGTGGTACGTCGTGGTAGAGA CGGCCGTTCGTGTAGGACTTCTGCAATTGGAGTGTTCGATCGAGGATCTT GAACGTATCATTTGAAAAATATTTCGATGATCATTTTGTTGGGTGTTTGT TGCTACAAATGCCAGGTGTACGTCCGATGGCCCGTTCTAGGTCCGCCTTC CGACCACCCGTACCTGGCCTTCACTACGTTGGAGCACGATCACCCAGTGG ACAAGGGCGTTTGTTGATGAAGTTCGTCGGCAGACTAAGCCTTTGGACAC CCCGACGAAGGACGCGTGTGGAAAGCTCACAGGCGAGTATTTAGGCAGGA TGTATGCGTGGTTTGTGTCCTTACTGTTGGCGATAGACATGGAAGTAAGT GGTGAGGATGGAGGAGGCTAAATATCTGGTGTGGAGAGGGAGACGCACGA AAATAATACCGTTGGACAGCAGCACTTCTCCTCCTGTCGGCTGACTGTGC TGCATGAATCTATTGTCATTTTCGAAAGGTTGTTGTTTTGTAACAGACGC GGGCTTCAAGCCAACGGTTCCAGGCAGGATGATCGAAGCTCTTACCGGCG AACGCCCGAACAACCGAGCCATCCAGAACCACGCCGCTTTTCATGGAAGG CGGAGAACGCCGTACGACGCTAACGAGCTGCTGCAAAGGGTAAGGGTTAG CTCTGTGACGCCCACCATATCTACGACAATCCTATGGCATGCTTTACATA TGTTCCTTGATTTGTTGTACGCTTAGAGTAGATGTGGGTATTAACGGACA CTTAAGCCACCTCTTGCGCGAACAGCTCCTTCTCTGGCGTGGATACGATT TACAAGTGTATGGAGGTATCGTACGATAGGGTACGTCATAGGCTACCTCT CTAAAAAAAAAAAAAAGCCGGGTAGATGAGTTAGAGCTGTTGAAGTATCC CTCATTTTTCATGGAATATAAGGAAGAAAACACCCCTGTGGGTACTAACA GACACTTTCTTCTGAGGCCGATTGCGCGAGTTCTAAAGCGTTTCGCGACC TGATTTTTTGTGTATATATATGTGGCTATTGACACATACAACCGTTTGAA AAGAAAAATCAATGATCGATACCCGGGGACATGAATCTCACACACACACA CACGTGCATGCAGCGCGCTCCTGGTCACCCCATAGACTTTGGCAGCACCC CTGATCGACATGCCACCGCGTACAGCATCGCAGGCCTTTTGAGCCTGGTC TGCGTCCACCCTTTTCCGGCCCATGCTTAACAGTAGGAGCCCGAGAAAGG GCAAGATGCTCCGCATCACGGGTGTTGGTGGGTGCACTGCTGTATCTCGG GGTTGAATGCTCTGATCGGCACGCTGAAGTGCTCAAACGAAAGCTAACGT CTTTCCGCAAAATTTGAAAAAAAACAGGGGTCTCCGCGAATTGTGCGCGG AGGTATGTGGATTTCAAATAATGTGTCCGTTAATAACCCCTGTCCGTTAA TACCCGCATCTACTCTATGGCACAGCAGTATCTCGATCAACATGTCCTCG GTTGAACAAGTCCTTCGAACCATCTAGTAGCACGCTTCTGGCTCTGAAGC GGGAGTTAGATACCTCCGCTGGTAGGGGACGCATGGTTTGTGGCGCCACC GTTTGCGGAGAGTGTGGGAACGGGATCATGGGGGGAGTGGGGACACCGTT CGAGTACAGGCTACTTGGTAGAACGTTAGCTTGCGGAAGGTGAAACGCTG AACACTGGTATGGAGCACCAGGGTACTGTTCTGAATGCATCTCAACCTCA TATATACTGGCCGCCGCTAACTCTGCACAGGTGAAGGACGCGACTGCAGA CGGAGGGAAGCACCTCCTCAAGATGGACACCGAGGGACGTATGACGCACA TCTTTTGGATGACGGCAACGCAGGTGAGAGGGCATGTGAGGTGGAAGGGA GGACGGACCACAGCGCGTGCGAGTAAAACATTGGAAGAAGCGTCTGCCCT TGTTTGAAAGTAAAAGCAATCCCGGATCAATGCTGGTGCGAATGCAATGC GCCAGTCTGCGCAGAGAGCGGAGCTGCACTTGGTGAAAATCTGCTACGAA CAGTGGCGTACGATAAGGTATTCCATGGTGAAGCTCATGTACGTGTACGC ACCCCAGGGTCCGATTCTCCTCCCGTCTACCCTCTTATTTGCGCCCTCCC GTCTACCCTCCTTTTCGCGCACACAGGTGGCACTCTCGATAAAGTACGGG CGCGTTCTTCTGTACGACGACATCGCGGTGAAGAACAAGTACAGGCTACC GGTAGGCATCGGCGCAGTGATCGACGGGGAGTACTTCACGCGCGTCGCCT TTCACATGATTTCGTCGGACACCCAAGCGGAGACGTTCGGGTGGGTGATG GAGGCATGGATGGAAACGCGGGGAGGGGAGGGGCCGGACGTGTTCATCCA AGACGCCGACGCTGCCTGTACTCTAGCAGCGGACAAGGTGTTCAAGGGGG CGAAGAAGCTGAGGTGCCTTTGGCACCTGTGGAAGAATGTCAAGGAAAAG CTCGGCAGCATCTTGGGCAAAGATTTTGCTGTGAGTACGATATCGCGTTG GTGCTGATGAGACTGGGAGTAACGGGAATGTGGGTGTCGTTCGAGTAACA AGCCGTGTCATGTCGCTCTGCGCCTGGTGTTGCCACACCCTGGCGATTAT ATTGCCGTTGGCATGGTTGCCCGATATCAAGAATTGGAGTGTCGGTTGTT GTCGCACAAGTCCAACCACCCAGCCTCGGTGACTGTAACCCCTCATCGAA CGGTCTGCAAGCAACAAACCACACCCAACCGGCCCACCATGTGGCTACGA CGGATAAGCAACCGCCTCTGTGGCCCTCTCGCGAAACAGCCTCGCCCCTT TATAGCGATAGTGTGTAGTACTGTCACCCGACTACGCCCAACCTGTGACA AAACGAAAGTGCTTCGCAAGGCGACTGCTTTGGACCCAATAGCCCCCCAC CCTCAACTTCAATTGTACACAGTTGTCTCAGAAAAAGCCTCCGCCGCTTC CGCCATCGACGCTGTCGTCACCGCCACCCACTAAACTCACAGGCTTTCAC CCACGACTTCCGGAAGATGCGCGGCCGGCTGTTGGAGACCGGCATGGAGG AATCGTTCGAGGAGCTCTGCGTCAACTTCCCGAAGGCGGAGGACTACTTG CGGCATTTGTACAAAGATCGTCACCGCTGGGCGGCGGCTTTCTCTGTGCT GACGTTCAGTGTTTCGTCGTTCACGTCCAACCGAGTCGAAGGTGGAGCGT GTTTGTGGTTCGTGCGTTTTTGCTTGGCGGGGTCGACCACGCGTTGTTGT TGCGCCTCAACAATATTGTCACGTGCTCGTAGGAAAACGGCGCCGACGCG TGGGATCACCACGTGTGGAAACGACCCAACTCCTCAACTCATTTTCCACT GGCCTACGTAGTGTGCGGTAGCCGTCCATCTACGCCTGTCGTAATTTGTA TTATCTTCCAGCAATGTATCTTCAAGCAATGCAGTAAACCCCACCGTACC ATGACCCGTACACCTGGTAACCGCGCCAGGTATGAACAGGATCATGAAGA AAGTGTGCGGCGCGATGACTTCTTTGCAAGGCGTCTTCGAGTTCTTCGAA GGAGCAATCGAGAAGCAGGAAGATCGGGCACTCCTTCGCGCCGCTCGGCT CGCCCTTCCTGTTGTCGCGATGGCGGGCGTTGACGACGTGTGGTTCGGGA AGAAGTTCATGGCGCCGATCCGTTTCGGACTTGGGATGTGGCCGTTTCGG TTCATGACCTTGGAGATGGAGGCCGCCGCGATATTTTGTGGTGGTGGTGA TGCAGTGCTTGAGGGGGACGAGCGTTTGGAAGCACTAGGGAAACTAGAGT TCCTGGGCGAGTTGATTGTGGGCGTCGAGACGGTCGCCGTAGTCATAGAA AGCCGTGACGGCCGGGTCATGCGGTACATAATTGGCAGCATGCAGGATGG CAGTCACATCTGCTCGTGCCGCACACTTCAAGAACTCGGTCTTTGTTGCC GGCACTTATGGCAGGCCATGCGTTTGAGCCCGAAGTTCAAATTTCACGTA GGCATGCTCAACAGGCATTGGCTAACAGAGCAGGGCCTGAGGGAACTGGA GGCTTGGCCACCAGAGTGCAAGCCGCAGTGGATGGTAGCGCTAGTCCACA GCGACGCGTCCAAAGACGACCAGGTACGCCCTCCCACGGCAGTGGTGGGT GACACTTGGTAAGCTATCCCGGAGAATGCCACCATAGAGACCAGCCTGCA GAGGGTGGCGCAGACAGGGCAAAGTAGTCAGGACCGCCGGCTCCTTTTTG TGGAGATGTTGAAGAAGGCCACCGCAGCCGTGAGCTCTGGGGTGCAGCTT GTTCCCCCTGATACTATGCGTGCTATCGTGCAGACTTTCGAAACTAGCAT GAACGCCGCGGCGATGATTTCGTCGGGGCAGGGGGCTGTACTTGGCAACC CACAAGCTGTGCGCCAACCAGCTGTTAGAAGTGAAGGTAGGAGAGAGAAG TCGAGCTTGGAATACGGCGGGGCAAGGAACAGGAGGCGCGCGCAGGCCAA CCATATTTGAACCTTGTTGAGCTCACGACGGGTTCTGGTCAGGTTTGGTC GTGGAGGGCAAACAGCGAAATTGAATGGCGTCGTGCTCTCCGGGGGGGGG CGACTTTGTGTGTTGTGATCCCACCCCCCGCTGTATATCCCAGGTGATGG TGACCAGAAAGCATCTTTGGGTTATTCTACTGTTTTTTCTGCAGCTGTGA CAGGGCGTTTTTCTACCGGTGATACCGGGGGTGTGTTGTGGTGGAATCAT TCCGTTCGAAAGATTTGTGATAGATTTGTTTATTTTCGGGCACCTCATTG CGGCTCTCTCCATGTTGGCTTGCGACGTACGGTTTTCGGGCAGCGTATTT CACTATTCCGGGGGAAAGGGGGCACCGTATTCCACATCCCAATTACCCGG GTACCCAGTCGGTACCACCTCCTCGAGCCCAGACGGGTACCCCGGGTACC TGGTTCCCGAAAATCTAGTCAAGGTCGAGCTCTACGTGGAGGTGACAGCG AAGAAGGTTTCACCTTGATGGGTGGTGCAGTGAGCGATAGTTTGACTGTG GTGTTCGGATGTCTCCCTCTGCTGTTCTTTCAACACGCACTTTGTCCCTA ACTTCCAAGAATAGAGAACAAAGACAAAAAAATTATCCGCGTTTCGAAGA TAGAATACAACATAAGATATTTACCCCACAAACAGCGGTACGATATCTTC GAAACGTGAACATCTGCCCCCAGATGTTGATCGACGTTTGAGCAAACTGT AATTTTTGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig162:213492..220551-

>mRNA_P-littoralis_Contig162.40.2 ID=mRNA_P-littoralis_Contig162.40.2|Name=mRNA_P-littoralis_Contig162.40.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2559bp|location=Sequence derived from alignment at P-littoralis_Contig162:213492..220551- (Pylaiella littoralis U1_48)
ATGTATCGTAGACGGCCGTGTGCTGTCTACCCCTATTTGCACGCCGCACT
TGCAAACAAAAACGTGCACGACTCGAACGCCTCCAGAACCACACACCGAG
AAACCCCTTTTCAAACTCAATACAGCAGCGAAACACCACAGCACAAGACC
ACCGCACCAGGCCACACAGCACGCGCAAGAGTAGACCACACAGCACAACA
GCAGCGAAACACAGCATGCGCAAGAGTAGACCACACAGCAGACATGTCCC
TGATGGATCTCCTACAAGATTGCGGAGACGACGACGACGCCGGCAGTGAT
ATGGACGTGTGTATAGGAAGCGACCCTCCCGCCGCCGTGCCGGCGGCGGT
GTTCGGAGGAACCGATAGCCTTCCGGCTGGCGGCACCTCCTTGGCACCCC
AAGAGGACGAAGCACAAGGGGCCGGTGACGAAGCACGAGGGGCTATGGAT
GGTACGTTAGACCTTATCACTAACGCTCAGAGCAAAAACGGTTCTGGTGG
CGATGGCGTAAGACCTCTTGGTGAAGCAGCAGAACAAGGAGAGGCGCCCG
GCACACCACAGAGGGCGGAGGGAGGCGCACCACAGAGGGCGGGGGGAGGC
GCAGCTGGCCCAGCTCCTCCTGAGGCTAGCGGGCGTACACCAACGGCTGG
CAGTCCGGCGTGCAGTGCCGAAGCACTGTCCGCAAGGCTTGCCGTCATTC
CTCTCGAGGGGAGCGTCGACGACGTGGCGGCCGCAGTGGTGGAAGCATGC
CAGGAGTTTGGAGTAGTGACGCGACGCTGCGACTCCAAGAAAAGCAAGAA
AGAAGCTGGCGGTCGTCTGGTGGCGGTTGGACTAGCGTGCAAGCACGCCA
TGCCGAATCGCCAGAAGGAGTACAGGCAGGGAGATGCAGCGAACGGCGCC
AAGAAACGGAAGTCCAGCAGCCAGAGAACAAACTGCAAAATGAAGGTCCG
CCTTCCGACCACCCGTACCTGGCCTTCACTACGTTGGAGCACGATCACCC
AGTGGACAAGGGCGTTTGTTGATGAAGTTCGTCGGCAGACTAAGCCTTTG
GACACCCCGACGAAGGACGCGTGTGGAAAGCTCACAGACGCGGGCTTCAA
GCCAACGGTTCCAGGCAGGATGATCGAAGCTCTTACCGGCGAACGCCCGA
ACAACCGAGCCATCCAGAACCACGCCGCTTTTCATGGAAGGCGGAGAACG
CCGTACGACGCTAACGAGCTGCTGCAAAGGGTGAAGGACGCGACTGCAGA
CGGAGGGAAGCACCTCCTCAAGATGGACACCGAGGGACGTATGACGCACA
TCTTTTGGATGACGGCAACGCAGGTGGCACTCTCGATAAAGTACGGGCGC
GTTCTTCTGTACGACGACATCGCGGTGAAGAACAAGTACAGGCTACCGGT
AGGCATCGGCGCAGTGATCGACGGGGAGTACTTCACGCGCGTCGCCTTTC
ACATGATTTCGTCGGACACCCAAGCGGAGACGTTCGGGTGGGTGATGGAG
GCATGGATGGAAACGCGGGGAGGGGAGGGGCCGGACGTGTTCATCCAAGA
CGCCGACGCTGCCTGTACTCTAGCAGCGGACAAGGTGTTCAAGGGGGCGA
AGAAGCTGAGGTGCCTTTGGCACCTGTGGAAGAATGTCAAGGAAAAGCTC
GGCAGCATCTTGGGCAAAGATTTTGCTGCTTTCACCCACGACTTCCGGAA
GATGCGCGGCCGGCTGTTGGAGACCGGCATGGAGGAATCGTTCGAGGAGC
TCTGCGTCAACTTCCCGAAGGCGGAGGACTACTTGCGGCATTTGTACAAA
GATCGTCACCGCTGGGCGGCGGCTTTCTCTGTGCTGACGTTCAGTGTTTC
GTCGTTCACGTCCAACCGAGTCGAAGGTATGAACAGGATCATGAAGAAAG
TGTGCGGCGCGATGACTTCTTTGCAAGGCGTCTTCGAGTTCTTCGAAGGA
GCAATCGAGAAGCAGGAAGATCGGGCACTCCTTCGCGCCGCTCGGCTCGC
CCTTCCTGTTGTCGCGATGGCGGGCGTTGACGACGTGTGGTTCGGGAAGA
AGTTCATGGCGCCGATCCGTTTCGGACTTGGGATGTGGCCGTTTCGGTTC
ATGACCTTGGAGATGGAGGCCGCCGCGATATTTTGTGGTGGTGGTGATGC
AGTGCTTGAGGGGGACGAGCGTTTGGAAGCACTAGGGAAACTAGAGTTCC
TGGGCGAGTTGATTGTGGGCGTCGAGACGGTCGCCGTAGTCATAGAAAGC
CGTGACGGCCGGGTCATGCGGTACATAATTGGCAGCATGCAGGATGGCAG
TCACATCTGCTCGTGCCGCACACTTCAAGAACTCGGTCTTTGTTGCCGGC
ACTTATGGCAGGCCATGCGTTTGAGCCCGAAGTTCAAATTTCACGTAGGC
ATGCTCAACAGGCATTGGCTAACAGAGCAGGGCCTGAGGGAACTGGAGGC
TTGGCCACCAGAGTGCAAGCCGCAGTGGATGGTAGCGCTAGTCCACAGCG
ACGCGTCCAAAGACGACCAGGTACGCCCTCCCACGGCAGTGGTGGGTGAC
ACTTGGTAA
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