mRNA_P-littoralis_Contig162.40.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 832 bits (2150), Expect = 6.340e-276 Identity = 450/615 (73.17%), Postives = 475/615 (77.24%), Query Frame = 1
Query: 1099 RRQTKPLDTPTKDACGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAFHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAA-----FTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMNAAAMISSGQGAVLGNPQAVRQPAVRSEGRREKSSLE 2928
RRQ + P + DAGFKP V G+MIEALTGERPN RAIQNHAA HGRRRTPYDANELLQRVKDATADGGK+LLKM TEGRMTHIFWMTA+QVALSIKYG V LYDD AVKNKYRLPVGIGAVIDGEYFTRVAF MISSDTQAETF W+ME+WMETRGGEGPDVFIQDAD ACTLAA+KVFKGAKKLRCLW LWKNVKEKLGSILGKDFAA D R + G + + +L PK L + F L V F + V+ RIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALP VAM GVDDVWFG++FMAPIRFGLGMWP RFMT+EMEAAAIFC GG+AVLEG ERLEALGKLEFLGELIVGVETVAVV+ESRDGRVMR HWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPT VVGDTW AIPE+ATIET LQRVAQTGQS QDRRLL+VEMLKKATAAVSSGVQLVPPDTMRAIVQTFE+SMNAAAMISSGQGAVLGNPQAVRQPAVRSE + + LE
Sbjct: 7 RRQEAEVKQPENKM--QYEDAGFKPAVQGKMIEALTGERPNTRAIQNHAAAHGRRRTPYDANELLQRVKDATADGGKYLLKMGTEGRMTHIFWMTASQVALSIKYGHVRLYDDTAVKNKYRLPVGIGAVIDGEYFTRVAFQMISSDTQAETFEWMMESWMETRGGEGPDVFIQDADGACTLAANKVFKGAKKLRCLWRLWKNVKEKLGSILGKDFAASFRQRLPEDARPVVGDRHGGIVRGALRQL----PKGGGLLAETVQRSSPLGGGF--LCADVQCFVVH-VQPSRRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPAVAMPGVDDVWFGQRFMAPIRFGLGMWPLRFMTIEMEAAAIFCVGGNAVLEGGERLEALGKLEFLGELIVGVETVAVVMESRDGRVMR-----------------------------------------------HWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTVVVGDTWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPDTMRAIVQTFESSMNAAAMISSGQGAVLGNPQAVRQPAVRSEAQPHLNLLE 565
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JBU5_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU5_9PHAE) HSP 1 Score: 748 bits (1932), Expect = 1.160e-257 Identity = 367/414 (88.65%), Postives = 383/414 (92.51%), Query Frame = 1
Query: 1531 SDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVP 2772
SDTQAETF W+MEAWMETRGGEGPDVFIQ+AD ACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFT+DF+KM GRL ETG EESFEELC+NF KAE+YLRHLYKDRHRWAAAFSVLTFSVSSFTS+RVEG+NR+MKKVCGAMTSLQGVFEFFEGAIEKQEDRALLR ARLALP VAMAGVDDVWFG KFMA IRFGLGMWPFR+MT+EMEAAAIFCGGG AVLEGDER EA KLEFLGELIVGVETVA V+ESR GRVMRYI+ SMQDGSHICSCRTLQELGLCCRH WQAMRLSPKFKFHVG+LNRHWLTEQGLRELEAWPPECK QWMVALV+SDASKDDQVRPPTA+VGDTW AIPENATIET LQRVAQTGQSSQDRRLLFVEMLKK T G P
Sbjct: 93 SDTQAETFEWMMEAWMETRGGEGPDVFIQEADGACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTNDFQKMGGRLSETGFEESFEELCINFAKAENYLRHLYKDRHRWAAAFSVLTFSVSSFTSSRVEGINRVMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRTARLALPAVAMAGVDDVWFGDKFMALIRFGLGMWPFRYMTMEMEAAAIFCGGGGAVLEGDERFEAPSKLEFLGELIVGVETVAAVMESRYGRVMRYIVCSMQDGSHICSCRTLQELGLCCRHFWQAMRLSPKFKFHVGILNRHWLTEQGLRELEAWPPECK-QWMVALVNSDASKDDQVRPPTAMVGDTWQAIPENATIETRLQRVAQTGQSSQDRRLLFVEMLKKTTCRELWGAACSP 505
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE) HSP 1 Score: 634 bits (1635), Expect = 1.060e-207 Identity = 349/774 (45.09%), Postives = 465/774 (60.08%), Query Frame = 1
Query: 706 TPTAGSPACSAEALSARLAVIPLEGSVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCKMKVRLPTTRTWP------------SLRWSTITQWTRAFVDEVRRQTKPLDTPTKDACGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAF-HGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGG-GDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGLRELEAWPPECKPQWMVALVHSDASKDDQVRPPTAV-----------------VGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMNAAAMISSGQGAVLGNPQAVRQPAVRSEGRREKSSLEYG 2934
+PT SA+AL L IP + + + +AV + C+E GV + S +K++ GGRLV+ L C H MP R+K G N K RKS SQRT C K+ + WP ++ + + D + Q PL TP K KLTDAG KP +IEAL R + R +QN R+ +RV+ T DGG + +K+D GR++H+FWMTA Q+AL+ +YG VLLYDD AVKN+YRLP+G+G VIDGEYF+R+ F ++ DT A TF WV+E + RG PD+F+QDADAA LAADKVF A+K RC+WHL +N+ + L +LG F AF F K RGRL E+G EE + +L FPKA++Y+ +LYKDR RWA SVL FS +S+T+NRVE MN K+V + SL VF+F AIEKQ RA LR+A+L LP V+ WFG P +F LG+W ++FM E+ A FC +A+LEG R +ALGK E++G ++V VETVAV++E+ DG RYI+ M DGSH+CSCRTLQELGLCCRH W AMRLS ++KFHVG+LN+HWL EQG + WP KP W VAL H S+ ++ P A G W A N TIE+SL ++ +TG + QDRR L+V+ LK+ATAAVS GV+ VPP+ +RA+V+ F+ ++ A+ I S G + NP VR P R G+R+++S E G
Sbjct: 98 SPTKEKWVYSADALRRDLENIPTQEDIPQLVSAVKDVCEEHGV--KMAVSTSTKEKGGGRLVSTTLLCVHGMPLRKKTASSG---NNTKSRKSDSQRTGCGCKINIR----WPIKTDVYKHPRLTTMELEHLHAVDKEAADVQQAQKGPLTTPMKATSAKLTDAGLKPAAQAVVIEALHDRRVHPRTMQNDDDIVRTHTRSTLKTCCRRRRVQACTKDGGVYKVKLDENGRLSHLFWMTAEQIALASRYGSVLLYDDTAVKNRYRLPLGLGVVIDGEYFSRIVFQSLTVDTTAVTFEWVLEEFKAARGA-APDMFLQDADAAMGLAADKVFPDARKRRCMWHLGQNLMKNLKKVLGSAFQAFLDQFYKTRGRLTESGFEEEYAKLVETFPKAKEYMAYLYKDRERWAVYSSVLVFSAASYTTNRVESMNAQAKRVLNSQASLVRVFKFLSDAIEKQAARAELRSAQLRLPSVSTPDTATYWFGAALTTPCKFALGVWAYKFMMDEVAMCATFCSSPSNALLEGASRDDALGKFEYIGMMVVNVETVAVIVENHDGTDKRYIVLGMTDGSHLCSCRTLQELGLCCRHFWAAMRLSRRYKFHVGILNQHWLAEQGRKPTSEWPEGAKPTWAVALNHKALSEGEKQAPLVATGRLQCATEGDEGGGGAGAGVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGG 859
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE) HSP 1 Score: 413 bits (1062), Expect = 2.460e-124 Identity = 276/748 (36.90%), Postives = 390/748 (52.14%), Query Frame = 1
Query: 781 SVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQG-DAANGAKKRK-SSSQRTNCKMKVRLPTTRTWPSLRWSTITQ---WTRAFVDEVRRQTKPLDTPTKDACGKLTDAGFKPTVPGRMIEALTGERP---NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHS------DASKDDQVRPPTAVVGDTW*A-IPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMNAAA-----MISSGQGAVL--GNPQAVRQPAVRSEGRREKSSLEY--GGAR 2943
+++DV VV C G + S + + A R+ L C +RQ EY D A G ++R S RT+C VR + WP + +T R +D R L ++T G KP + ++ L + N RA+QN AA HG + P DA + + V ATADGG +KMD GR+THI+W T QVAL +YG V LYDD AVKN+YR+P+G+ AVID EY TR+ +I++DT +TF ++++ +E+RGG+ PD+FIQDADAA T A +VF A RCLW+L +N+ + L +LG D F +FR +R +L E F L +PKAE Y+R +Y DR RWA S L FSV S+T VEG N ++K C + +SL V ++F G I Q+D A+LR A LP M F K + F + WP RFM EM AA +FC G ++G ER ALG+ LE++ + V V + E RDG+ Y++ DGSH+C CRTLQ LGL CRH+W AM SP+F+FH HWLTE+ + WP +P+W+V+ + D + + G W + + + T++T L + + G + QDR++L+ ++ KK A S P A+V F T +N A + G+GA L NP +R PA S RR + Y GG++
Sbjct: 81 TLEDVEEEVVRLCVGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKRSARTDCP--VRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVQQMTSHGMKPKEVTKAMKVLHEDSDIDINKRAVQNAAATVHGAEK-PRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQIITADTTTDTFLSMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWYLNQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMRVVYDDRARWAEYVSPLVFSVGSWTX--VEGQNALIKDKCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMVAPPATAF-KSVLESCEFSIASWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAALGRTLEYIEGKLCDVINVFGIHEQRDGKAFDYLVLLFSDGSHLCQCRTLQTLGLFCRHVWAAMMHSPRFRFH------HWLTEKARGTPQQDWPDVARPRWVVSXSNRHAAGEVDGAAGEGEGEGVGGCGGRWKSFVGSSQTVQTVLLDLKEKGPTYQDRKVLYADVTKKLGQAASILSDRFSPTVAVALVDQFLTMVNMQAGGVGTTTTGGRGAALFMANPGTLRLPARTSNKRRPGAVERYTRGGSK 816
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5K3E8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E8_9PHAE) HSP 1 Score: 376 bits (966), Expect = 1.560e-114 Identity = 204/460 (44.35%), Postives = 274/460 (59.57%), Query Frame = 1
Query: 1219 NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFC--GGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHSDASKD 2583
N RA+QN AA HG + P DA + + V ATADGG +KMD GR+THI+W T QV L +YG V LYDD AVKN+YR+P+G+ AVID EY TR+ I++DT +TF W++++ +E+RGG+ PD+FIQDADAA T A +VF A RCLWHL +N+ + L +LG + H ++ G E F L PKAE Y+R +Y DR RW S L FSV +T++ VEG N ++K C + +SL V +F G I Q+D +LR A LP M F K + F + WP RFM EM AA +FC GGG+A +G ER ALG+ E++ + GV V + E RDG+ Y+I DGS++C CRTLQ LGL CRH+W AM SP+F+FHVG+L+ HWLTE+ + WP +P+W+V+ H+ D
Sbjct: 13 NKRAVQNAAATVHGAEK-PRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVVLWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGEMKTAFHGRVQVCASAAVIGKERKFNALIEKHPKAEKYMRVVYDDRARWVEYVSPLVFSVGLWTTSSVEGQNALIKDKCNSRSSLLDVATYFSGIIRSQKDAPMLRDAIDHLPPNRMVAPPATAFKKSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEA--DGPERAAALGRTFEYIEGKLCGVIYVFRIHEQRDGKAFDYLILLFSDGSNLCQCRTLQTLGLFCRHVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHAAREVD 469
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: D8LU83_ECTSI (SWIM-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU83_ECTSI) HSP 1 Score: 372 bits (956), Expect = 3.370e-111 Identity = 214/538 (39.78%), Postives = 301/538 (55.95%), Query Frame = 1
Query: 1141 CGKLTDAGFKPTVPGRMIEALTGERPNNRAIQNHAAFHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHS----DASKDDQVRPPTAVVGDTW*A-IPENATIETSLQRVAQTGQSSQDRRLLFVEMLKK 2733
CG L G T P R A A HG + P DA + + V ATADGG +KMD GR+THI+W T QVAL +YG V LYDD AVKN+YR+P+G+ AV+D EY TR+ I++DT +TF W++++ +E+RG + PD FIQDADAA T A +VF A R LWHL +NV + L +LG F +FR +R +L E F L +PKAE Y++ +Y DR RWA S L FSV S+T++RVEG N +++ C + +SL V ++F G I Q+D A+LR A LP MA F K + F + WP RFM EM AA FC G ++G ER A G+ E++ + + V + E RD + Y++ DGSH+C CRTLQ L L CRH+W AM SP+F+FHVG+L+ HWLTE+ + WP +P+W+V+ H+ D + + W + + + T++T L + + G + QDR++L+ ++ KK
Sbjct: 110 CGSL--CGLPCTSPPRTATTAADIDHQPSAGNAAAIVHGAEK-PRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTKEQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVVDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGKQ-PDTFIQDADAAMTAAVREVFPDALARRNLWHLNQNVIKALAKVLGGYMKPFMDEFRCVRQQLSLAKFERKFNALIEKYPKAEKYMQVVYDDRARWAEYVSPLVFSVGSWTTSRVEGQNALIRDRCNSRSSLLDVAKYFSGIICSQKDAAMLRDAIDHLPPNRMAAPPATAF-KSVLESCEFSIAGWPRRFMEQEMTAAITFCQMGGGEVDGPERAAASGRTFEYIEDKLCDAIYVFGIHEQRDDKAFDYLVLLFSDGSHLCQCRTLQTLRLFCRHVWAAMMYSPRFRFHVGLLHEHWLTEKARGTPQQDWPDVARPRWVVSNRHAAREVDGAAGEGEGEGVGGCSGRWKSFVGSSQTVQTVLLDLKEKGPTDQDRQVLYADVTKK 642
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5L482_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L482_9PHAE) HSP 1 Score: 358 bits (920), Expect = 8.050e-111 Identity = 199/235 (84.68%), Postives = 202/235 (85.96%), Query Frame = 1
Query: 313 MSLMDLLQDCGDDDDAGSDMDVCIGSDPPAAVPAAVFGGTDSLPAGGTSLAPQEDEAQGAGDEARGAMDGTLDLITNAQSKNGSGGDGVRPLGEAAEQGEAPGTPQRAEGXXXXXXXXXXXXXXXXXXXXXTPTAGSPACSAEALSARLAVIPLEGSVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCKMKV 1017
MSLMDLLQDCGDDDDAGSDMDVCIGSDPPAAVPA VFGGT+SLPAGGTSLAPQEDEAQGAGDEARGAMDGTLD ITNAQSK SGGDG+RPL EAAEQGE TPQRAEG TPTAGSPA SAEALSARLA+IPLEGSVDDVAAAVVEACQEFG V RRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNC MKV
Sbjct: 1 MSLMDLLQDCGDDDDAGSDMDVCIGSDPPAAVPA-VFGGTNSLPAGGTSLAPQEDEAQGAGDEARGAMDGTLDPITNAQSKTVSGGDGIRPLREAAEQGETSDTPQRAEGGAAGPAPPEASGR--------TPTAGSPAYSAEALSARLAIIPLEGSVDDVAAAVVEACQEFGAVMRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCNMKV 226
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE) HSP 1 Score: 367 bits (942), Expect = 1.270e-105 Identity = 199/457 (43.54%), Postives = 276/457 (60.39%), Query Frame = 1
Query: 1147 KLTDAGFKPTVPGRMIEALTGERP---NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFAAFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQG 2502
++T G KP + ++AL + N RA+QN AA HG ++ P DA + + V ATADGG +KMD GR+THI+W T QVAL + G V LYDD AVKN+YR+P+G+ AVID EY TR+ I++DT +TF W++++ +E+RGG+ PD+FIQDA AA T A +VF A RCLWHL +N+ + L +LG D F +FR +R +L T E F +PKAE Y+R +Y DR RWA + FS+ S+T++R+EG N +++ C + +SL V ++F G I Q+D A+LR A LP MA F K + F + WP RFM EM AA +FC G ++G ER A G+ E++ + V V + E RDG+ Y++ DGS +C CRTLQ LGL CRH+ AM SP+F+FHVG+L+ HWLTE+
Sbjct: 483 QMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAKK-PRDAADSYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRCGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDAVAAMTAAVREVFPDALARRCLWHLKQNIIKALAKVLGGDMKPFMDEFRCVRQQLSLTKFERKFNAFIEKYPKAEKYMRVVYDDRARWAEYVPPVVFSLGSWTTSRIEGQNALIRDKCNSRSSLLDVAKYFSGTIRSQKDAAMLRDAIDHLPPNRMAAPPATAF-KSVLESCEFSIAGWPRRFMEQEMTAAIMFCQMGGGEVDGPERAAASGRTFEYIEGKLCDVIYVFGIHEQRDGKAFDYLVLLFSDGSRLCQCRTLQTLGLFCRHVLAAMMHSPRFRFHVGLLHEHWLTEKA 937
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JFD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD7_9PHAE) HSP 1 Score: 293 bits (751), Expect = 5.930e-84 Identity = 190/540 (35.19%), Postives = 258/540 (47.78%), Query Frame = 1
Query: 1342 MDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKDFA---------AFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGKLEFLGELIVGVETVAVVIESRDGRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMVALVHSDASKDDQVRPPTAVVGDTW*AIPENATIETSLQRVAQTGQSSQDRRLLFVEMLKKATAAVSSGVQLVPPDTMRAIVQTFETSMN-----AAAMISSGQGAVL--GNPQAVRQPAVRSEGRR 2910
MD GR+THI+W + QVAL YG V LYDD AVKN+YR+P+G+ AVID EY TR+ I++DT TF W DAD A T A +VF A RCLWHL +N+ + L LG AF +FR +R +L E F L +P+ E Y+R +Y DR RWA S L FSV S+T++RVEG N ++K C + +SL + ++F G I Q+D A LR A LP MA K + F + WP R M EM AA ++C ++G ER A + F Y++ D SH+C CRTLQ LGL CR +W AM SP+F+FHVG+L+ HWLTE+ L WP +P+W + +D + T++T + + + G + QDR++++ + KK A S P A V F ++N A A + G+GA L N VR PA S RR
Sbjct: 1 MDDSGRLTHIWWQSREQVALWNGYGHVTLYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVW-------------------DADVAMTAAVSEVFPDALWRRCLWHLHQNIMKTLAKDLGGQMKVCSTVCVGMAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTSRVEGQNALIKDKCNSRSSLLDMAKYFSGIICSQKDAAALRDAIDHLPPARMATPPTTAL-KSVLESCEFSIAAWPRRLMEQEMTAAIMYCQMDGGEVDGPERAAASRRTTF-----------------------DYLVLLFSDVSHLCQCRTLQTLGLFCRQVWAAMMHSPRFRFHVGLLHEHWLTEKARGTPLHDWPDVARPRWEKWTGRRERERDGG-------------GGXSSQTVQTVVLDLKEKGPTDQDRQVVYANVTKKLGQAASILSDKFSPTVAVARVDQFLATVNVQAGGAGATTTGGRGAALFMANSGTVRLPARTSNKRR 484
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE) HSP 1 Score: 296 bits (757), Expect = 1.880e-82 Identity = 218/662 (32.93%), Postives = 312/662 (47.13%), Query Frame = 1
Query: 745 LSARLAVIPLEG-SVDDVAAAVVEACQEFGVVTRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQG-DAANGAKKR-KSSSQRTNCKMKVRLPTTRTWPSLRWSTITQWTRAFVDEVRRQTK-----PLDTPTKDACGKLT----DAGFKPTVPGRMIEALTGERP---NNRAIQNHAA-FHGRRRTPYDANELLQRVKDATADGGKHLLKMDTEGRMTHIFWMTATQVALSIKYGRVLLYDDIAVKNKYRLPVGIGAVIDGEYFTRVAFHMISSDTQAETFGWVMEAWMETRGGEGPDVFIQDADAACTLAADKVFKGAKKLRCLWHLWKNVKEKLGSILGKD---------------------------------------FA-AFTHDFRKMRGRLLETGMEESFEELCVNFPKAEDYLRHLYKDRHRWAAAFSVLTFSVSSFTSNRVEGMNRIMKKVCGAMTSLQGVFEFFEGAIEKQEDRALLRAARLALPVVAMAGVDDVWFGKKFMAPIRFGLGMWPFRFMTLEMEAAAIFCGGGDAVLEGDERLEALGK-LEFLGELIVGVETVAVVIESRD-GRVMRYIIGSMQDGSHICSCRTLQELGLCCRHLWQAMRLSPKFKFHVGMLNRHWLTEQGL-RELEAWPPECKPQWMV 2553
L +L + EG +++DV VV C GVV S + + R+ L C +RQ E+ D G +R + S RT C+ +V + ++ P + + + VD K L + K+T + G KP I+AL + N RA+QN AA HG + P DA + + V TADGG +KMD GR+THI+W T Q+AL N+YR+P+G+ AVID EY TR+ I++DT TF W++++ + +RGG+ PD+FIQDAD A T A +VF A RCLWHL++++ + L LG FA AF +FR +R +L E F L +P+ E Y+R +Y DR RWA S L FSV S+T+ RVE ++ +C ++ + + G R L L P A K + F WP R M EM AA +FC L+G ER ALG+ E++ + + V V + E RD GR Y++ DGSH+C CRT Q LGL CRH+W AM SP+F+FHVG+L++HWLTE+ L+ WP +P+++V
Sbjct: 18 LKTKLEAVQTEGKTLEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEK-PRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQMALW---------------NRYRMPLGVLAVIDSEYRTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQMKVCSTVCVGMAGSSCAEALTQATPTSPASFRGRSACSCFAQAFMDEFRCVRQQLSLAKFERKFNALIAKYPQTEKYMRAVYDDRTRWAEYVSPLVFSVGSWTTPRVE-----VQLLCRESSAPRRMHP--RGVTLSTTCRLL---EWLLQPTTAF---------KSVLESCEFSFAAWPRRLMEQEMTAAIMFCQMDGGELDGSERAAALGRTFEYIEDKLCDVIYVFGIREHRDDGRTFDYLVLLFSDGSHLCQCRTFQTLGLFCRHVWAAMMYSPRFRFHVGLLHQHWLTEKARGTPLQDWPDVARPRFVV 644 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.40.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig162.40.2 >prot_P-littoralis_Contig162.40.2 ID=prot_P-littoralis_Contig162.40.2|Name=mRNA_P-littoralis_Contig162.40.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=853bp MYRRRPCAVYPYLHAALANKNVHDSNASRTTHRETPFQTQYSSETPQHKTback to top mRNA from alignment at P-littoralis_Contig162:213492..220551- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig162.40.2 ID=mRNA_P-littoralis_Contig162.40.2|Name=mRNA_P-littoralis_Contig162.40.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7060bp|location=Sequence derived from alignment at P-littoralis_Contig162:213492..220551- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig162:213492..220551- >mRNA_P-littoralis_Contig162.40.2 ID=mRNA_P-littoralis_Contig162.40.2|Name=mRNA_P-littoralis_Contig162.40.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2559bp|location=Sequence derived from alignment at P-littoralis_Contig162:213492..220551- (Pylaiella littoralis U1_48)back to top |