prot_P-littoralis_Contig162.13.63 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig162.13.63
Unique Nameprot_P-littoralis_Contig162.13.63
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1880
Homology
BLAST of mRNA_P-littoralis_Contig162.13.63 vs. uniprot
Match: D7FME7_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME7_ECTSI)

HSP 1 Score: 758 bits (1957), Expect = 1.810e-234
Identity = 718/1321 (54.35%), Postives = 788/1321 (59.65%), Query Frame = 0
Query:  503 PVPRAPVLGCAGAWIGARVRADPRPXXXXXXXXXXXXXXXXXXVAEAVASSQRTPRYPLPRKRRFR-AGVGFPGEDEEGDDGALSPPASGVDGVGVGWAGAXXXASGASVKVEGGGTVAGSMGGRXXXXXXXXXXXXXXXXXAGVTVGXXXXXXXXXXXXEGSAMAGHV---------------------FFANGGGRDAEASRGGRRAPTMLPGEVAAMRRQRLVKAAEPLNQRGLTRFQLSQMLEEKNKAFKDVRSRLRLVLEHKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYHEERKLARHLLRGVANRMALARRELCEGRPEARDGRVADAGKAICRHISLLTVSPPRSTTLGGGATPGLKREGGAPV----PPAADAAASGAGAAGXXXXXXXXXXGSPSSEAASERQGKGE---LTMPELSRIGFEVEQSMTKAKAGLQAALSGDAAKASPVKMEGVDVGGGINSNGAAAGDAGFGHRFSARDLSRAPEGSWGLAVRLLPHQAQALAWIRDLAGRGLGGVLCDEPGTGKTVVAAASVALVASCRAAVEEEAV-------KKGLESSLSPAHNLCVSFPETKAAHGASFAAGGAASKVDTATPGISVADAKDGASLPSKASPGKGAGVRATRPRPGRLSPPPQLVVMPSWAMARWHMELAQACPRLVIKVWEEWRHQERHGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---KAPVPRT-RCSSADVVLCSLERLMEVSSGGDSADVRLARSVRWTQEFVIRCAMTEPQKEVYAAVARSPEIMAALSGG--TAPDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVKGDIAEEALLALRRAALTGALDKTPPPGSSASAGEVEAQKEEFWRGHAKDLELSVPERLEKYSGKLARLGRAVERLTSAGKKVLILGALPDALELVHQYLTETDVPHECWAASGEIFPSSAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AATSHSPAMAAL------------LGAHHRSLGSFPSRASSPRVPPVPPKPAHERLWSGVQAPLWRFRGSSRTSVLLAPPSAVIDAVSGGAGLCGTARRARQTDPNLRKGSLLGLPAVDAVLILDEDPETTPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSLLTLPLCARSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRAEGAR------------VVTVVRFVTEGTIEEALEGRGARAGIGGLEGRPLGEAV 1756
            P+P APVLGCAG W+GARV ADPRPXXXXXXXXXXXXXXXXXXVAEAVASSQR   YPLPRKRRFR  G+G     E+GD  A                     A  A  + EGG T  G + G XXXXXXXXXXXXXXXXX      XXXXXXXXXXXX                              + A    RD EASRG    P +LPGEVAAMRR RLVKAAEP NQRGLTRFQLSQMLEEK KAFKDVR+RLRLVLE KPRILPPVKPPRRRKTLWDFLLDEMRLIATDY+EERKLARHLLRGVANR  LARRELCEGRP+ARDGRVADAG AICRH+SLL  SP                          P  A  ++ G G                     +E  G GE   LTMPELSRIGFEVEQ  T+AKA ++A+L+GDA KASPVK+EG+    G  SNG     AG+   FS+R+LSRAP+ SWG+AV LLPHQA+AL+WIR LAGRGLGGVLCD+ GTGKTV AAA+VA+VA+CR+ VE E         KK L   L           E+ AA G                                KASP +  G  A RPRPG L+PPPQLVV+PSWAMARWHMELAQACPRLVIKVWEEWR QE      XXXXXXXXXXXXXXXX                 KA +P T R SSADVVLCSLERL EV  GG                   RCAMT+PQ +VY+AVARS E++AALSG   T P PA         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              G+  SAG+ EAQKEEFWRGH KDLELSVPERLEKYSGKLA+LGRAV RL +AGKKVL+LGALPDA  LVHQYL ETDVPHECWA +GE+FP+ A                XXXXXXXXXXXXXXXXXXXXXXXXXX AA S  P +AA             L AHH  LGSFPSR+  P+ P  PPKPAHERLWSGVQ PLWRFR S RT VLLAPPSA+++AV+GG+GLC    + R    ++R+GSLLGL  +DAVLI DE P  T     XXXXXXXXXX                        +SLLTLP CAR +                                                     GR +G              VVTVVR+V  GTIEE LEG G + GI  L     G AV
Sbjct:  504 PLPHAPVLGCAGLWLGARVCADPRPXXXXXXXXXXXXXXXXXXVAEAVASSQRDLGYPLPRKRRFRPVGLG-----EDGDKAATGT------------------AFEAKAEAEGGVTRNGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQWYEHYHAVRRVRDNEASRGEGGLP-ILPGEVAAMRRHRLVKAAEPQNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYNEERKLARHLLRGVANRTRLARRELCEGRPQARDGRVADAGVAICRHLSLLASSPXXXXXXXXXXXXXXXXXXXXXXXXKGPLLASWSSGGVG-------------------GETEAVGGGEEVELTMPELSRIGFEVEQLTTRAKALVEASLAGDAGKASPVKIEGMVASDGPGSNGV----AGY-EEFSSRNLSRAPD-SWGMAVHLLPHQAKALSWIRALAGRGLGGVLCDDRGTGKTVTAAATVAMVAACRSVVETERTDIFLAQEKKRLSERLVKGE-----AEESGAASGXXX---------XXXXXXXXXXXXXXXXXXXXKASPPR-QGTLAMRPRPGSLAPPPQLVVVPSWAMARWHMELAQACPRLVIKVWEEWRSQEHXXXXXXXXXXXXXXXXXXXXXQQKLSPQATAAGGSVSGKARLPPTARRSSADVVLCSLERLAEVD-GGXXXXXXXXXXXXXXXXXXXRCAMTKPQAKVYSAVARSREVVAALSGEGTTIPPPALASNGLSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------GALLSAGQAEAQKEEFWRGHVKDLELSVPERLEKYSGKLAKLGRAVARLAAAGKKVLVLGALPDARLLVHQYLVETDVPHECWAGNGEMFPNVAEEESTRGVDAGTAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAALSVGPGVAAXXXXXXXSPALAPLSAHHNPLGSFPSRSPFPQAPVTPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRRGSLLGLGPIDAVLIFDEGPPITTRTTAXXXXXXXXXXWSRAALAAAL--------------QSLLTLPRCARRSSAPRAIRSMPATGGGAAADEN--------------------------------GRVDGXXXXXXXXXXXXESVVTVVRYVANGTIEETLEGEGDK-GISSLGAGGEGIAV 1693          
BLAST of mRNA_P-littoralis_Contig162.13.63 vs. uniprot
Match: A0A6H5JHX4_9PHAE (SNF2-rel_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX4_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 8.810e-164
Identity = 444/762 (58.27%), Postives = 487/762 (63.91%), Query Frame = 0
Query:  503 PVPRAPVLGCAGAWIGARVRADPRPXXXXXXXXXXXXXXXXXXVAEAVASSQRTPRYPLPRKRRFRAGVGFPGEDEEGDDGALSPPASGVDGVGVGWAGAXXXASGASVKVEGGGTVAGSMGGRXXXXXXXXXXXXXXXXXAGVTVGXXXXXXXXXXXXEGSAMAGHV----------------------------FFANGGGRDAEASRGGRRAPTMLPGEVAAMRRQRLVKAAEPLNQRGLTRFQLSQMLEEKNKAFKDVRSRLRLVLEHKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYHEERKLARHLLRGVANRMALARRELCEGRPEARDGRVADAGKAICRHISLLTVSPPRSTTLGGGATPGLKREGGAPVPPAADAAASGAGAAGXXXXXXXXXXGSPSSEAASERQGKGELTMPELSRIGFEVEQSMTKAKAGLQAALSGDAAKASPVKMEGVDVGGGINSNGAAAGDAGFGHRFSARDLSRAPEGSWGLAVRLLPHQAQALAWIRDLAGRGLGGVLCDEPGTGKTVVAAASVALVASCRAAVEEEAVKKGL---ESSLSPAHNLCVSFPETKAAHGASFAAGGAASKVDTATPGISVADAKDGASLPSKASPGKGAGVRATRPRPGRLSPPPQLVVMPSWAMARWHMELAQACPRLVIKVWEEWRHQERHGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAPVPRT-RCSSADVVLCSLERLMEVSSGGDSADVRLARSVRWTQ 1232
            P+P AP+LGCAG W+GARV ADPRPXXXXXXXXXXXXXXXXXXVAEAVASSQR   YPLPRKRRFR  +G  G+ +EG  GA                        A V+ EGG T  G + G XXXXXXXXXXXXXXXXX      XXXXXXXXXXXX                                     + A    RD EASRGG   P + PGEVAAMRRQRLVKAAEP NQRGLTRFQLSQMLEEK KAFKDVR+RLRLVLE KPRILPPVKPPRRRKTLWDFLLDEMRLIATDY+EERKLARHLLRGVANR  LARRE CEGRP+ARDGRVADAG AICRH+SLL  SPP                            AS                  PS+        + ELTMPELSRIGFEVEQ  T+AKA ++AAL+GDA KASPVKMEG+D   G   NGA    AG+ + FS+R+LSRAP+ SWG+AV LLPHQ +AL+WIR LAGRGLGGVLCD+ GTGKTV AAA+VA+VA+CR+ VE E     L   E  LS  H +     E+ AA GAS A                      G +    + PG+GA   A RPRPG L+PPPQLVV+PSWAMARWHMELAQACPRLVIKVWEEWR QE H    XXXXXXXXXXXX                  KA +P T R SS DVVLCSLERL EV  GG SAD RLARSVRW+Q
Sbjct:   65 PLPHAPILGCAGRWLGARVCADPRPXXXXXXXXXXXXXXXXXXVAEAVASSQRDLGYPLPRKRRFRP-LGLGGDGDEGATGAAFE---------------------AKVEGEGGVTRNGGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWYQHYHAVRRVRDNEASRGGGGLP-IPPGEVAAMRRQRLVKAAEPQNQRGLTRFQLSQMLEEKTKAFKDVRARLRLVLERKPRILPPVKPPRRRKTLWDFLLDEMRLIATDYNEERKLARHLLRGVANRTRLARREFCEGRPQARDGRVADAGVAICRHLSLLGSSPPXXXXXXXXXXXXXXXXXXXXXXXKGPLLAS-----------------CPSTSGGIGGGEEMELTMPELSRIGFEVEQLTTRAKALVEAALAGDAGKASPVKMEGLDALDGTGINGA----AGY-NEFSSRNLSRAPD-SWGMAVHLLPHQEKALSWIRALAGRGLGGVLCDDRGTGKTVTAAATVAMVAACRSVVETERTDIFLVQEEKRLSE-HLVKGEAEESGAASGASSAG--------XXXXXXXXXXXXXGRTSTKASRPGRGA--LAMRPRPGSLAPPPQLVVVPSWAMARWHMELAQACPRLVIKVWEEWRSQE-HXXXXXXXXXXXXXXXXLQQKLSPQATAAGGSVSGKARLPPTARRSSVDVVLCSLERLAEVD-GGVSADARLARSVRWSQ 767          
BLAST of mRNA_P-littoralis_Contig162.13.63 vs. uniprot
Match: A0A6H5JI88_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI88_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.630e-43
Identity = 128/274 (46.72%), Postives = 147/274 (53.65%), Query Frame = 0
Query: 1488 AATSHSPAMAALLGAHHRSLGSFPSRASSPRVPPVPPKPAHERLWSGVQAPLWRFRGSSRTSVLLAPPSAVIDAVSGGAGLCGTARRARQTDPNLRKGSLLGLPAVDAVLILDEDPETTPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSLLTLPLCARSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRAEGARVVTVVRFVTEGTIEEALEGRGARAGIGGLEGRPLGEAVFGPFY 1761
            A +S SPA+A L  AHH  LGSFPSR+ SP+ P  PPKPAHERLWSGVQ PLWRFR S RT VLLAPPSA+++AV+GG+GLC    + R    ++RKGSL GL  +DAVLI DE P  T                        XXXXXXXX       +SLLTLPLCAR +                                                     GRAEG RVVTVVR+V +GTIEE LEG G + GI  L GRPLGE +FGP Y
Sbjct:   64 AVSSPSPALAPL-SAHHNPLGSFPSRSPSPQAPATPPKPAHERLWSGVQGPLWRFRCSPRTPVLLAPPSAILEAVAGGSGLCPNGEQPRPDGSSVRKGSLCGLGPIDAVLIFDEGPPIT-------------------RATATXXXXXXXXAALAAALQSLLTLPLCARRSSAPRAIRSMLATGGGAADENGRVDRGGVATA---------------------AGRAEGERVVTVVRYVVDGTIEETLEGEGDK-GISSLGGRPLGEVLFGPTY 295          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.13.63 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FME7_ECTSI1.810e-23454.35Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHX4_9PHAE8.810e-16458.27SNF2-rel_dom domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JI88_9PHAE2.630e-4346.72Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 384..409
NoneNo IPR availableCOILSCoilCoilcoord: 448..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 876..902
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1083..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 523..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 834..862
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1777..1800
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1682..1710
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1758..1845
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..592
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1153..1182
NoneNo IPR availablePANTHERPTHR48126RE24507Pcoord: 1252..1797
coord: 267..1476
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 999..1214
e-value: 3.0E-6
score: 26.4
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 962..1037
e-value: 6.7E-7
score: 30.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 973..1146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig162contigP-littoralis_Contig162:72763..119975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig162.13.63mRNA_P-littoralis_Contig162.13.63Pylaiella littoralis U1_48mRNAP-littoralis_Contig162 71133..137963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig162.13.63 ID=prot_P-littoralis_Contig162.13.63|Name=mRNA_P-littoralis_Contig162.13.63|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1880bp
MSSRSSKRRSGAGAANASSKNAGGSGASEDAGDEDGGGRSLRKTPSRRTN
SRGADTQDRRKRQRRQGSSSGWRCRMMYASGLFAGGGGLGTTPPGSRRRM
PPPPPLRDRAGETGRPVSLPVVTRRTRTGTAKRKRRRTKRQATTVTATLT
VATTPLLLLLLLLLLQRRLRRRRLLPNPRTEKEPAVSAAAVAAVATTRRA
AAPLPPRQPPPAAKLPPLPPRPLPRRRARRRRTKKRKRRKRRRRWKRPVR
RLEKESGETCRFSHSEVAAKQAAAAAVAVEQSTAAAQAAAAAKAQQVCAA
AAAAAAERERVERERLEAVSRATAAAQKARAAASSGEAAAAATTAPVTSA
PAAAATTAASAAAAAAAAAPAPAPATATAAATAAQQAQAQQAQAQAQAQA
QAQAQAQAQAQAQAQAQAQVQAQAQAQAQAHAQAQAQAQAQAHAQAQAQQ
AQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQQQRG
KTPVPRAPVLGCAGAWIGARVRADPRPPPPPPPPSCSRRGAAASAVAEAV
ASSQRTPRYPLPRKRRFRAGVGFPGEDEEGDDGALSPPASGVDGVGVGWA
GAGSGASGASVKVEGGGTVAGSMGGRGGGGGGAAAAAASPSSGAGVTVGG
GGGGGAGGAAAEGSAMAGHVFFANGGGRDAEASRGGRRAPTMLPGEVAAM
RRQRLVKAAEPLNQRGLTRFQLSQMLEEKNKAFKDVRSRLRLVLEHKPRI
LPPVKPPRRRKTLWDFLLDEMRLIATDYHEERKLARHLLRGVANRMALAR
RELCEGRPEARDGRVADAGKAICRHISLLTVSPPRSTTLGGGATPGLKRE
GGAPVPPAADAAASGAGAAGSAAEAGAAGVGSPSSEAASERQGKGELTMP
ELSRIGFEVEQSMTKAKAGLQAALSGDAAKASPVKMEGVDVGGGINSNGA
AAGDAGFGHRFSARDLSRAPEGSWGLAVRLLPHQAQALAWIRDLAGRGLG
GVLCDEPGTGKTVVAAASVALVASCRAAVEEEAVKKGLESSLSPAHNLCV
SFPETKAAHGASFAAGGAASKVDTATPGISVADAKDGASLPSKASPGKGA
GVRATRPRPGRLSPPPQLVVMPSWAMARWHMELAQACPRLVIKVWEEWRH
QERHGSAAAPAPAPAPASGSAGSSPPLSLPLPLSLSSGKAPVPRTRCSSA
DVVLCSLERLMEVSSGGDSADVRLARSVRWTQEFVIRCAMTEPQKEVYAA
VARSPEIMAALSGGTAPDPAAAAAASNGSTVPANAATTAASGAAAAAAAA
GGGEGASPAFAGGSVGGGGSGGRVKGDIAEEALLALRRAALTGALDKTPP
PGSSASAGEVEAQKEEFWRGHAKDLELSVPERLEKYSGKLARLGRAVERL
TSAGKKVLILGALPDALELVHQYLTETDVPHECWAASGEIFPSSAAAPSP
SSSSPAASPAAAAAAGAAAAAAAAAAAGGTGVGPGVGAATSHSPAMAALL
GAHHRSLGSFPSRASSPRVPPVPPKPAHERLWSGVQAPLWRFRGSSRTSV
LLAPPSAVIDAVSGGAGLCGTARRARQTDPNLRKGSLLGLPAVDAVLILD
EDPETTPNVSPTPTPAATTTIPMTATGLSEGLSERSSRTALTSALKSLLT
LPLCARSAAAAAAPKGAAAVVCSPPPLSAAASSIEGGGKEEAEGGAAGGG
GGGGGGGGGGVGRAEGARVVTVVRFVTEGTIEEALEGRGARAGIGGLEGR
PLGEAVFGPFYGKEKQTPPPPPPVCLSTSHNTFDSSSSSSSSSSSTDTSR
HSRGRGSDSVYGCGRGGGGRRRCTSRRRRERGEWRSGGQGGGSACKMRIG
GKDVLGEKEPAACGGFRGGVSLGVEKKVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase