prot_P-littoralis_Contig162.12.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig162.12.2
Unique Nameprot_P-littoralis_Contig162.12.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length176
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig162.12.2 vs. uniprot
Match: D7FME6_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME6_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 6.620e-74
Identity = 117/168 (69.64%), Postives = 134/168 (79.76%), Query Frame = 0 
Query:    1 MGDWNADPADV-RDPYAPDCGSRAAEGFYVGALYGVVWGVVGRLSSSPILPSTPTIRALKTTPVPESHPA-GLWNQGATRHLRTLGRGAAGYGMAAGSTAGVFGVFVGMVNAGTCACERFRGRKDWFNNMCGGAVAGLSVALLSRHTRTPQMIAAHIAGAAAITSIVA 166
            M DWN +P ++    YAPDC SRAAEGFYVGALYG VWGV+GR + +P LPSTP +  LK     ++ PA GL  +G +R +R  GRGAAGYG+AA STAGVFGVFVGMVNAGTC CER RG+KDWFNN  GGA AGLSVALLSRHTRTPQM+AAH+AGAAAITS+VA
Sbjct:    1 MEDWNVEPPEMTHKDYAPDCSSRAAEGFYVGALYGAVWGVIGRAAHAPTLPSTPAMGELKPPSGLQAQPAPGLETRGVSRQVRAFGRGAAGYGIAAASTAGVFGVFVGMVNAGTCGCERLRGKKDWFNNAFGGAAAGLSVALLSRHTRTPQMLAAHVAGAAAITSVVA 168
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FME6_ECTSI6.620e-7469.64Similar to mitochondrial import inner membrane tra... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 19..159
e-value: 5.2E-14
score: 52.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig162contigP-littoralis_Contig162:66507..68744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig162.12.2mRNA_P-littoralis_Contig162.12.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig162 66142..70755 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig162.12.2 ID=prot_P-littoralis_Contig162.12.2|Name=mRNA_P-littoralis_Contig162.12.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=176bp
MGDWNADPADVRDPYAPDCGSRAAEGFYVGALYGVVWGVVGRLSSSPILP
STPTIRALKTTPVPESHPAGLWNQGATRHLRTLGRGAAGYGMAAGSTAGV
FGVFVGMVNAGTCACERFRGRKDWFNNMCGGAVAGLSVALLSRHTRTPQM
IAAHIAGAAAITSIVAVATGPPVGS*
back to top