mRNA_P-littoralis_Contig162.6.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA) HSP 1 Score: 1262 bits (3266), Expect = 0.000e+0 Identity = 656/1131 (58.00%), Postives = 775/1131 (68.52%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLLAESKGEVVDDKAVFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRG----KKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAIGYVPEAGDGG-KDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGH----GCGGEVVAHRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIFRKEAAWSTSDTVRVVGSAPEAGDMEASSWEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPG-GKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPM 3684
MGVPKFYRW+SERYPKINQI SD++L+PEFDNLYLDMNGILH CTHPNDD LS QLSERD+ LGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR+ KD A+ VFDSNCITPGTEFMAK+S HL+YFI KK+ EDPLW+ LTV FSGHEVPGEGEHKIM YIRD+R AG PNTRHCMYGQDADLILLGLV HEPHFTLLREVVNF + G K A K+V+KTT DAQFQLLHLSVLREY+W EFT + T +A+ ERVVDDFVF+TFLVGNDFLPHMPSLDIGEEAF+LLF IYR L P W GYLTR+G+I+ DRLE+FL VG +ED IF+ R EE R R R R G + VPSE ++ EE +LQ YE AM+ +G+VPE G KD+KGRYYFEKFGITPVHT++H LR YV GL WCLA GCVSW WFFPFHYVPM+SDLTGLR+ F V F L +PFLPFEQLLGCLP ASA LPK YA LM SP+SPI DFYP DF+IDMNGKRNPWEAVN+LPFID+ RL AAV E CP L+PEE +RNT G V+EY + + +SCNPEIGL+DI C + + +P+SIE F LP S +P AGFPSL+VL + + + + +N FG+ SRY T+VL L+RP LP A LA +V+GRS ++NWPL+HEA + AY+ GR PGSGGVD+G + L RPLQG T +FG EEA+VP+HM LW +PA DPRF ER +L+ R P+GSRV CL GC G V A GKVDV+ DLRPPEPPFG A+ +V+ Y+ + CQ L I+P VFG++VG+V DPG+ D+GLNLK NGRYQLLGYSRC+ R++AAWST+DTVR+VGSA E E +WEF+ A +L+ Y +PQ+F L R +EA L GP G+ + EV WL L TAGL R PLTT+A+S++A++AVER ADVRQAV+V I K K + S+LL + + TDAP+
Sbjct: 1 MGVPKFYRWLSERYPKINQIVSDTSLIPEFDNLYLDMNGILHGCTHPNDDSLSKQLSERDVFLGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRSAKDAAAARAEXXXXXXXXXXXXVFDSNCITPGTEFMAKVSAHLKYFIRKKIKEDPLWQRLTVIFSGHEVPGEGEHKIMQYIRDQRCAGAFAPNTRHCMYGQDADLILLGLVAHEPHFTLLREVVNFNNGRAGGARGAKNAVKLVMKTTADAQFQLLHLSVLREYLWVEFTLGMSAATASALSLERVVDDFVFITFLVGNDFLPHMPSLDIGEEAFALLFGIYRELAPAWRG-GYLTRDGSIEDPDRLEQFLAAVGAKEDEIFATREIEEEGMRERQR----RHGNRQNVPSEEDLDDEETRLQEAYEDAMLQVLGHVPEGSTPGQKDFKGRYYFEKFGITPVHTQVHSELRHQYVAGLQWCLA----GCVSWEWFFPFHYVPMLSDLTGLRDMFGKVSFRLSKPFLPFEQLLGCLPAASAWCLPKPYALLMTSPDSPIADFYPADFKIDMNGKRNPWEAVNLLPFIDASRLFAAVHERCPVQLLTPEERKRNTYGAVLEYTYSEHATGTVVSCNPEIGLSDIRQCVSEEKELPWSIESHTSFTSALPLGSTIPLAGFPSLNVLPIEQAEAKPIKLNVFGSESRYSTMVLTLRRPRGLPSAEQLAPRVIGRSVFVNWPLLHEA----------------------------------------------------------KNAYLKGRATPGSGGVDVGPIGSRLTVRPLQGTSCRDVTAY---MFGSEEADVPLHMALWQSPAPDPRFEERGAPSLDVRLPVGSRVLCLTAAGAERQARGCVGRVKALTNGKVDVVVDLRPPEPPFGAAVAAAVQDRYYPAHAVCQRLRIRPDVFGKVVGTVNADPGRYDIGLNLKANGRYQLLGYSRCVLREQAAWSTADTVRIVGSAGEDAAEEVGAWEFTEAAARLVALYMTRYPQMFAALHTLEHGRSYEAGALFGPNAGEETLAEVKAWLESLPTAGLPRTPLTTKAMSKDAIRAVERAADVRQAVIVGEGRIVKREFKGVNASELLRANTIEATDAPL 1061
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: D7FME4_ECTSI (5\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonuclease II) (Exo II) (P140) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME4_ECTSI) HSP 1 Score: 1153 bits (2983), Expect = 0.000e+0 Identity = 575/669 (85.95%), Postives = 608/669 (90.88%), Query Frame = 1
Query: 1972 MNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAHRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIFRKEAAWSTSDTVRVVGSAPEAGDMEASSWEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGEQPDLGDRIVNMRAKGVPFGVWGTVVACHSHSGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKIHTKTRLQSLRANGAPQDASAKGNKK 3978
MNGKRNPWEAVNVLPFID+YRLRAAVKELCPPTALSP+EAERNTRGQVVEY+HD +SRKEMSCNPEIGLADI C+ +SR+VPFSIEPGECFRPELP D+I+PSAGFPSLHVLTVGSV+ERKVPVNCFGTASRYETLVLELKRPPVLPPASAL+GKVLGRSAYLNWPLMHEA VVGISDEKEEYRL++V+ R TF + AGRWRL+AAEEQGAY+TGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWS P+EDPRF ERE++TLEERFPLGSRVTCLHGGNGHGCGGEVVAH GKVDVLADLRPPEPPFGLAIVQSVKTAYF Q+KACQ+LGI PQVFGRIVGSV VDPG+VDL LNLKQNGRYQLLGYSRC+ R E AWSTSDTVRVVGSAP DMEA SWEFSLEAIKLITRYARAFPQLFHGLAR GGERFFEA LLG GGK+KME++SKWLSELETAGLQRVPLTTRALSR AVKAVERGADVRQAVLVKNAM+KKTLLK+LEPSQLLAY VADHTDAPMDTGGE+PDLGDRIVNMRAKGVPFGVWGTVVACHSHS CVEVVFDEEFIGGGTLHG+CSNYRGALVPWA VAKIHTK RLQ+LRA APQ A A+G KK
Sbjct: 1 MNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPTALSPQEAERNTRGQVVEYFHDAFVSRKEMSCNPEIGLADIPQCTASSRIVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKRKT---------RVKVSTFTDEAAGRWRLKAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENVTLEERFPLGSRVTCLHGGNGHGCGGEVVAHSKGKVDVLADLRPPEPPFGLAIVQSVKTAYFPQHKACQTLGISPQVFGRIVGSVSVDPGRVDLALNLKQNGRYQLLGYSRCVLRNEPAWSTSDTVRVVGSAPVTEDMEARSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFEAEMLLGKGGKSKMEKISKWLSELETAGLQRVPLTTRALSREAVKAVERGADVRQAVLVKNAMVKKTLLKNLEPSQLLAYHVADHTDAPMDTGGEKPDLGDRIVNMRAKGVPFGVWGTVVACHSHSACVEVVFDEEFIGGGTLHGVCSNYRGALVPWATVAKIHTKARLQALRAKAAPQ-AEAQGRKK 659
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA) HSP 1 Score: 1136 bits (2939), Expect = 0.000e+0 Identity = 608/1239 (49.07%), Postives = 786/1239 (63.44%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEA---KLLAESKGEVVD-DKAVFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFT---RDVPQET---EAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAI-----------GYVPEAGDGGKDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAHRAG-KVDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIFRKEA-------------AWSTSDTVRVVGSAP------EAGDMEASSWEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGE---QPDLGDRIVNMRAKGVPFGVWGTVVACHSH-SGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKI 3903
MGVPKFYRWISERYPKINQ+ +DS LLPEFD+LYLDMNGI+H CTHP+ +S LSERD+++G+ HY+DRI+T IV+P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD+ EA K L + E D K FDSNCITPGTEFMA++S+ ++YFI KK+ EDPLW+ L + FSGHEVPGEGEHKIM +IR+ R+ PNTRHCMYGQDADLI+LGLV+HEPHFTLLRE+V+FG SR A K V+K T+ + FQLLHLS+LREY+ EF RD + E D ER++DDFVF+TFLVGNDFLPHMPSLDIG+ AF LLF Y+ +P WG YLT G I +RLE F+ +G E+ IF R + E E+ + RK KR G+ E + S+A+IA EA+ Q Y+ + + G+ P KD+KGRYYFEKF + P + H LR AY+EGLLWCLAYYYRGC+SWGWF+P+HY PM+SDLT L+ F + F++G P PFEQL+GCLP AS+ +P+SY +LM SP+SPII FYP++FE+DMNGKRNPWE VN+LPFID + L++++ + CP L+ +E RN G+V Y DPA + S N +IGL DI C++ + + FRP L P + +P GFPSL+VL + S++ V +N FG S+Y T +L LK LP A+ LA LG+S ++NWP+MHE+ VV +SD E R + R F E RW + Y G +PGSGGV+IG +Q+ K PLQGM+ +P G+ +K+FGKEEA++P+ M LW PA DPRF ER +T+++RFP + L G GC G V+ G K+ V + PPEPPFGLAI +SV+ +Y S A L + P +F RI GSV DPG+ DLGLNL +LGY+R RK+ W T D+V VVGS E G E +E++ +A++L+ Y + FPQLF L + ERF+EA + GP G+A + +V WL+ +ETA + R+P TT A+ AV AVER ADVR V+ K K+ ++ + P+ L TD + T P+LGDRI N+ A GVPFG GTVV+ H SGCVEVV D EFIGG TL G CSN+RG L WA + KI
Sbjct: 1 MGVPKFYRWISERYPKINQVITDSALLPEFDHLYLDMNGIIHGCTHPSHLDVSDVLSERDMMMGIMHYLDRIITQIVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAKDLAEAMKDKSLTSNPNEENDAHKGAFDSNCITPGTEFMARVSECIKYFIRKKIKEDPLWRNLKIIFSGHEVPGEGEHKIMQHIREMRNQPGYQPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIVDFGAGFSRNDNALKSVMKFTKQSDFQLLHLSILREYLQIEFAFGGRDGIYDLSVKEGTYDLERLIDDFVFMTFLVGNDFLPHMPSLDIGDGAFDLLFNTYKEQRPTWGDGQYLTESGCISDPERLEAFIAVIGAAENDIFEMREENEEEYTKKRRKWDKRDGKPEGL-SDAQIAAAEARKQTNYQAVIESMLEKNSSDGSLVDGWQPVTDPKKKDFKGRYYFEKFTMIPTDVKEHLALRKAYIEGLLWCLAYYYRGCISWGWFYPYHYGPMLSDLTNLKHVFDNINFEIGAPLKPFEQLMGCLPPASSALVPRSYRKLMSSPDSPIIQFYPDNFEVDMNGKRNPWEGVNILPFIDVHLLKSSISKYCPDEVLTADERNRNRLGKVYLYTFDPASNDMVPSFNKDIGLPDIQKCNSRVDIFEENDSTDISFRPTLVPGTQIPYPGFPSLNVLPLVSIELIPVGLNIFGMPSKYATTMLTLKPMGTLPAANDLADHFLGKSLFINWPMMHESRVVAVSDAVCEVRKVKKKKK-------------------VRWFTPPETERWETESTTMAEQYANGARIPGSGGVNIGDIQIRFKVVPLQGMKTNPQDGSSKKLFGKEEADIPLQMALWEAPAPDPRFIERGPMTIKDRFPPKCNII-LTKGKYRGCMGSVIGVVDGEKLGVKVKVVPPEPPFGLAIARSVQESYISTADAANVLKMPPGIFSRITGSVFFDPGRYDLGLNLTYKTDLCVLGYTR---RKKGNRYGKNEKKQANNVWKTGDSVLVVGSRANSSSDGEKGGREKIVFEYTPKAVRLVAAYRQKFPQLFAALCKNPRERFYEAKQVFGPNGEAMLPKVRNWLNNIETAKIPRMPSTTEAMPLTAVAAVERAADVRLTVIDKQGQTKELNIR-VPPAALYKEGSTAATDVLLATDNNVNPAPELGDRIANLCANGVPFGARGTVVSIHDQASGCVEVVMDNEFIGGSTLQGSCSNFRGKLCVWAHLLKI 1214
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: K0STL9_THAOC (5'-3' exoribonuclease 1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STL9_THAOC) HSP 1 Score: 1113 bits (2879), Expect = 0.000e+0 Identity = 606/1237 (48.99%), Postives = 782/1237 (63.22%), Query Frame = 1
Query: 334 KFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDM----QEAKLLAESKGEVVDDKA-VFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAIGYVP----------EAGDGGKDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAHR-AGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRC------IFRKEA--AWSTSDTVRVVGSAP-EAGDMEASS---------WEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTD---APMDTGGEQPDLGDRIVNMRAKGVPFGVWGTVVACHSHS-GCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKIHTKTRLQSL 3930
+FYRW+SERYPKINQ+ ++ LLPEFD+LYLDMNGI+H CTHPN +S L+ERD++LG+ HY+DRI+T IV+P+ ++MAIDGVAPRAK+NQQRSRRFR+ KD+ +EA+ L G D A FDSNCITPGTEF+ +IS +RYFI KK+ EDPLW+ L+V FSG EVPGEGEHKIM +IRD R+ PNTRHCMYGQDADLI+LGLV+HEPHFTLLRE+++F R A K V K T+ + FQLLHLS+LREY+ EF Q ++ D ER++DDFVF+TFLVGNDFLPHMP+LDIG+ AF+LLF YR + WG+ YLT G I + RLE FL +G E IF ERA E R + R+ KR G++ +PS+ EIA EA Q Y + + V + G+ KD+KGRYY+EK + PV H LR +Y+EGL+WCLAYYYRGC+SWGWFFP+HY PMISDLT L F +++F++G+P PFEQL+GCLP AS+ +P+ Y QLM SPESPI +YP F +DMNGKRNPWE VN+LPFID+ RL+ A+K+ CP L+ EE RN GQV Y +D A + SCN +IGL +I C + + S E F PEL P + +P GFPSL+VL + V+ R +NCFG AS+Y +L + P LP A LA ++G+S Y+NWP+MHEA VV ++D K E R+ + R E RW + + Y+ G G PGSGGV IG VQ+ LK PLQGM+ P G+ +K+FGKEEA++P+ M L S+PA DPRF ER +L++RFP +V L G GC G V++ KV V + PPEPPFGLAI +SV +Y S A + L + P+VFGR+ G++ PGK DLGLNLK R +LGY+R +K+ AWS DTV VVGS A D + S WEF+ +A++L+ Y AFP LF LAR ERF++A + GP G+ V +WL ETA + R+P T A+ AV AV+R ADVR A + K+ ++K++ +K + + L TD A ++ P+LGDR+ N+ A GVPFG GTVVA H S GCVEVV DEEFIGG TL G C+N+RG L W + KI +SL
Sbjct: 62 QFYRWLSERYPKINQVITNEALLPEFDHLYLDMNGIIHGCTHPNHLDVSDVLTERDMVLGIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSAKDLAEATKEAQRLRPIDGADPDPYAGAFDSNCITPGTEFLLRISNCIRYFIRKKIKEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSGGFGRNDNALKEVKKFTKQSDFQLLHLSILREYLEIEFAY---QHDQSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFLKVIGAAETEIFEERAKNEVVMRKKQRRWDKRDGKSS-MPSDLEIAEVEASKQSDYNAMVRSMMADVSSGTQVVEGWKQVGESEKDHKGRYYYEKLQLKPVDIAGHLALRKSYIEGLIWCLAYYYRGCISWGWFFPYHYGPMISDLTNLPAVFQSIRFEIGQPLKPFEQLMGCLPPASSALVPRIYRQLMSSPESPIKQYYPNSFVVDMNGKRNPWEGVNILPFIDANRLKDAIKDNCPDRLLTAEERNRNRVGQVFCYSYDEACNDTIPSCNRDIGLPNIEKCHSRVITIDNSSESTVSFSPELIPGTKIPYPGFPSLNVLPIERVELRNAGLNCFGFASKYPNTILTMHTLPQLPSAEQLAANLIGKSIYVNWPMMHEAKVVAVTDSKSEVRM-------------------VKKKLKTRRHGLQEVERWNAISEKMVEQYLAGAGYPGSGGVQIGDVQIRLKILPLQGMKASPLDGSSKKLFGKEEADLPLQMALASSPAPDPRFIERGPKSLKDRFPSKCKVV-LTKGKYRGCIGTVLSTLDKDKVGVKVSVIPPEPPFGLAIARSVGESYISSGDAARVLKMNPKVFGRVTGNLFFSPGKYDLGLNLKYRDRRYVLGYTRIKQDPNEAKKKKTSNAWSAGDTVLVVGSKRMSASDEDFDSAGEEKKRTIWEFTPKAVRLVAAYKNAFPHLFAALARDPDERFYDAKKVFGPKGEETCARVLQWLKATETAAMPRLPDKTEAMPVAAVHAVQRAADVRSASVRKDGVVKESNVK-IPAAALYRESSTAATDVLLASENSVSAPPELGDRVANLCASGVPFGARGTVVAIHDPSEGCVEVVMDEEFIGGSTLQGSCANFRGKLCVWNHLLKISAADSARSL 1273
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO) HSP 1 Score: 1111 bits (2874), Expect = 0.000e+0 Identity = 593/1224 (48.45%), Postives = 785/1224 (64.13%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLLAESKGEVVDDKAVFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKAS-KVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAI-------------GYVPEAGDGGKDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGEC-FRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAHRAGK-VDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIF---RKEAA---WSTSDTVRVVGSA--PEAGDM-EASSWEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPMDT---GGEQPDLGDRIVNMRAKGVPFGVWGTVVACH--SHSGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKI 3903
MGVPKFYRW+SERYPKINQI SD+ LLPEFD+LYLDMNGI+H CTHP+ +S LSERD++LG+ HY+DRI+T IV+P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD EA +K +K VFDSNCITPGTEF+AK+S+H++YFI KK+ EDPLW LTV FSGH++PGEGEHKIM +IR+ RS PN RHC+YGQDADLI+L L+THEPHFT+LREV++F N R ++ + K V K T+++ FQLLH+S+LREY+ EF + PQ D ER +DDFVF+TFLVGNDFLPH+P+LDIG+ AF LLF +Y+ + GWG YLT G I RLE F+ +G E I +R EEA + + R+ KR G+ EE PS+AE+A E++ Q Y +M++A+ G+ P G KD+KGRYYFEK TP+ E H LR +Y+EGL+WCLAYYY+GC+SWGWF+P+HY PM+SDL + FA ++F+LGEP PF+QL+GCLP AS+ +PK Y LM SP+SPII FYP +FE+DMNGK+NPWE VN+LPFID L++ V++ CP + LS E RN+ G + Y HDP S NP IGL DIS C + V+ F P F P+L + +P GFPSL+VL + S+ K +NCFG S+Y +L L P L P LA +LG+S ++NWP+MHEA V+G+S E E ++ + + F EA +WR + E +Y G G PGSGGV IG V+L LK +PLQGM+++P G+++K FG++EA+VP+ + L+ PA DPRF ER TL++RFPL S+V L G GC G V++ K V V + PPE PFGL V+ V+ +Y S +A + L + V G+I+G + + GK DLGLNLK + GY+R RK + WS DT+ VVGS PE GD E WE++ AIKL+ Y FPQLF G+ + E+ ++AN + G G+A + + WL + E+A + R P+TT ++ R AV VE+ A +R L K K++L+K + S L TD + E P LGDRIVN+ G+PFG GTV+ H + +GCVEVV DEEF+GG +L G CSN+RG L WA + K+
Sbjct: 1 MGVPKFYRWLSERYPKINQIISDNALLPEFDHLYLDMNGIIHGCTHPSHMDISDVLSERDMMLGIMHYLDRIITQIVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAKDTAEA-----TKDLPASEKNVFDSNCITPGTEFLAKVSEHIQYFIRKKLKEDPLWHGLTVIFSGHDIPGEGEHKIMQHIRELRSQPGYQPNNRHCIYGQDADLIMLSLITHEPHFTILREVIDF--NFCRQQQNTLKAVKKFTKESDFQLLHVSILREYLHIEFCHEHPQ-----YDLERTIDDFVFMTFLVGNDFLPHLPALDIGDGAFDLLFSVYKEQRAGWGEGNYLTESGDISDPHRLEVFVEAIGAVETDILEQREKEEAAYAKKKRRWDKRDGK-EEGPSDAELAAVESEKQNGY-LSMIEALMQQPNWSPENFVAGWTPVTESGQKDFKGRYYFEKLKFTPLDKEKHWALRRSYMEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDLIDIPRMFAEIEFELGEPLKPFQQLMGCLPPASSALVPKPYRFLMQSPDSPIIQFYPSEFEVDMNGKKNPWEGVNLLPFIDIALLKSTVEKFCPDSKLSTAELVRNSMGTIYCYKHDPTSIETVTSPNPSIGLPDISVCHSTISVIEFDEGPSTSKFEPKLVSGTQLPYPGFPSLNVLPIASIALTKAGLNCFGVPSKYLNTILHLTELPELAPIEQLAESLLGKSVFVNWPMMHEAKVIGLSSESREIKILNGKRKVSE-------------------FGKVEADKWRTDSMEMLQSYHVGNGTPGSGGVYIGPVRLRLKVQPLQGMKINPNNGSKKKYFGQQEADVPLQLCLFQAPAPDPRFIERGPATLQDRFPLNSQVV-LTKGKYRGCKGTVISIADAKNVAVNVQIIPPEIPFGLFAVREVQESYMSSLEAAKMLRMNAGVLGKIMGRLQFEQGKYDLGLNLKTADGMCVPGYTRKKVENARKAGSRQVWSAGDTLLVVGSQKLPENGDKDERIQWEYTPRAIKLVNEYRTKFPQLFSGIMKNSNEKRYDANEIFGNNGEAWLPVIRDWLDKHESAKIPRSPVTTESMPREAVTKVEKYAAIRNLALQKKGYPKESLIK-IPGSALYREGSIGATDVLLAADLNNSEAPQLGDRIVNLCVDGIPFGAKGTVIGIHEAATTGCVEVVMDEEFMGGTSLQGACSNFRGRLCLWAHLLKV 1189
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA) HSP 1 Score: 1092 bits (2824), Expect = 0.000e+0 Identity = 589/1224 (48.12%), Postives = 780/1224 (63.73%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEA-KLLAESKGEVVDDKA--VFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAIGYVPE---------AGDGGKDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAHRAGK-VDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSR--CIFRK----EAAWSTSDTVRVVGSAPEAGDM-------EASSWEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGEQ---PDLGDRIVNMRAKGVPFGVWGTVVACH-SHSGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKI 3903
MGVPKFYRWISERY KIN+I SDS LLPEFD+LYLDMNGI+H CTHP+ +S +SERD++LG+ HY+DRI+T IV+PR +YMAIDGVAPRAK+NQQRSRRFR+ KDM EA K L + + + + K +FDSNCITPGTEFMA++S+ ++YFI KK+ EDPLW+ L V FSGHE+PGEGEHKIM +IR ++ PN RHC+YGQDADLI+LGLVTHEPHFT+LREVV+FG S K A K+V K T++A FQLLHLSVLREY++ EF +D P T +D ER +DDFVF+TFLVGNDFLPH+ +LDIGE AF LLFQ+YR + WG YLT G I + RLE +L +G E R +A++ + R+ +KR G + PS+AE+ + Q Y + + +G G G KD+KGRYYFEK +TPV H LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL L E F +KF +G+P LPF+QL+ CLP ASA+ +PK Y LM SPESPI FYP DFE+DMNGK+NPWE VN+LPFI+ L +K+ P LS E RN G + Y D ++ + + IGL DI C++ ++P G F P+L + +P GFPSL+VL + S + + V CFG S+Y T+VL+L + P +PP LA +L RS ++NWP+MHEA V ISDEK E L + + + E +W + E Y+ G VPGSGG+ I +V++ L+ PLQGM+ +P+ G+R+K FGKEEAEVP+ + LW PA DPRF ER +TLE+RFP S V L G G G+VV GK V V PPE PFGLA+ +S+ ++ S A + L I P VFGRI S+ G DLGLNLK + + GY+R I R+ + AW T D++ V+GSA GD E WE++ +A++LI Y + FPQLF L + E+ ++AN + GP G + ++ +WL+ E+A L R+P++T+ + + AV AVE+ D+R L K ++L+K + + L + TD + + + P+LGDR+VN+ A G+PFG GTVVA H + +GCVE+V DEEF+GG TL G+CSN+RG L WA + +I
Sbjct: 1 MGVPKFYRWISERYTKINEIVSDSALLPEFDHLYLDMNGIIHGCTHPSHMDISDVISERDMMLGIMHYLDRIITQIVKPRVSVYMAIDGVAPRAKLNQQRSRRFRSAKDMAEATKDLPKERDDAGNIKKPDLFDSNCITPGTEFMARVSETIKYFIRKKIKEDPLWRDLKVIFSGHELPGEGEHKIMEHIRMMKNEPNYQPNNRHCIYGQDADLIMLGLVTHEPHFTILREVVDFGGGFSN-KNALKMVKKQTKEADFQLLHLSVLREYLYLEFCKDAPPGT---LDLERTIDDFVFMTFLVGNDFLPHLNTLDIGEGAFDLLFQVYRDQRSQWGEGEYLTENGNISDSARLETYLATIGNVETETLENREVTDAQYLKKKRRWNKRDG-LDAGPSDAELKAADDAKQGNYLNMIQNIMGNQENREFVDGWNPVGPGEKDFKGRYYFEKLKLTPVDVSGHHALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRNLPEMFEKIKFTVGKPILPFQQLMSCLPPASASLVPKPYRILMTSPESPIKQFYPTDFEVDMNGKKNPWEGVNLLPFIEINLLLDTIKKNAPDDMLSDAERNRNRVGDIFLYTFDATVNDTVEAPHKGIGLTDIVKCNSRVTILPQYDAEGVSFNPKLIEGTQIPYPGFPSLNVLPITSAELTPIGVKCFGFPSKYPTMVLDLHQMPDMPPVETLADNLLNRSLFINWPMMHEAKVCAISDEKGEVYL-------------------FKGKKKLKKWNKMEQDQWARESEEMVQNYLGGINVPGSGGIQIQQVKIRLRLLPLQGMKTNPSNGSRKKFFGKEEAEVPLQLALWQAPAPDPRFVERGPMTLEQRFPCDSSVV-LTQGKYKGNVGQVVGIADGKKVGVKVLTVPPEVPFGLALARSINESFVSSSDASRILKINPMVFGRITSSLPFIQGNYDLGLNLKSHEGLCVAGYTREKKIDREYKDEKKAWDTGDSLLVIGSARALGDSNGKDAKTERIQWEYTPKALRLINEYRQLFPQLFSALGKLSSEKKYDANKVFGPNGVEVLPKIREWLNNNESAKLPRIPISTQVMPQEAVTAVEKTTDIRNLQLRKKGFPNESLIK-IPGTALFRENSVSATDVMLASDHNESKAPELGDRVVNLCATGIPFGARGTVVAIHKATTGCVEIVMDEEFVGGTTLQGLCSNFRGKLAVWAHLMRI 1198
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: W7U4G2_9STRA (5'-3' exoribonuclease 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4G2_9STRA) HSP 1 Score: 1082 bits (2798), Expect = 0.000e+0 Identity = 592/1255 (47.17%), Postives = 780/1255 (62.15%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLLAESKGEVVDDKAVFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQN-ASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFG-RAEEVPSEAEIALEEAKLQRTYEKAMVDAI--------------GYVP-------EAGDGG------------------KDYKGRYYFEKFGIT-PVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGEC--FRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPV--LPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAH-RAGKVDVLADLRPPEP--PFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIFRKEAA-------WSTS-DTVRVVGSAP--EAGDMEASS--WEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVK-NAMIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGEQPDLGDRIVNMRAKGVPFGVWGTVVACHSHSGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAK 3900
MGVPKFYRW+SERY +NQ+ SD +LLPEFDNLYLDMNGI+H CTHPND + LS+ +++ +++Y+DRIVT IV+P+++LY+A+DGVAPRAKMNQQRSRRFRA KD EA+ A +G VD+ VFDSNCITPGTEFMA + HL+YFI KKM EDPLW+ LT+ +SGH +PGEGEHKIM Y+RD +++ N RHCMYGQDADLI+L L THEPHFTLLREV++FG+ A G ++ V+K T++A FQLLHLS+LREY+ EF RDVP+E E + ER+VDDFVFLTFLVGNDFLPH+PSLDI E AF LF++Y W GYLT G ID + L+ FL +G ED I R ++ A+F R R+T K+FG R EVPSE +A EA+ Q YE AM A+ G+ P DGG K+++GRYYFEK G+ P + + L Y EGL WCLAYY +GCVSW WFFP+HY P+ISD+ L ++KF+LGEPFLPFEQLL CLP ASA FLP+ Y LM +P SPI+DFYPE+F++DMNGK NPWE V ++PFID RLR A+K+ CP ++L+ +E +RN+ G+++ + H PA+S SCNP + D++H T V P S P F P L P +++P GFPSL VL + V+ + + VN G+ SRY T+ L L PV LP LA +++GR Y+NWP+MHEA + +++ K W + +EQ AY+ GRG G GGVD+GKV++ LK R LQG+ PATG+ +KVFG EA+VP+ + +WS P DPRF E+ + L +R PLG+ V L G G G+VV + + G+ V +L EP P GL ++ +F + ++L I +V G++ GS V+PGK DLGLNLK ++ L Y R RK A W+ + D VR+VGSA E GD E WE+S +A+ L+ Y AFP+LF L R E +E L G A++E++ WL+ TA + RVPLTT+ LSR A++A+ER AD QA K A K + +L P ++ +D G+ P+LGDR+VN+ GVPFG+ GTVVA H+ + CVEV+FD+EFIGG +L G CS YRG +PW+A+ K
Sbjct: 1 MGVPKFYRWLSERYVSVNQVISDLSLLPEFDNLYLDMNGIIHACTHPNDQEVCQGLSQEEMMKNIWNYVDRIVTQIVKPQKLLYVAVDGVAPRAKMNQQRSRRFRAAKDAAEAREEAGKRGVSVDEATVFDSNCITPGTEFMAVVDAHLQYFIRKKMREDPLWRRLTIIYSGHAIPGEGEHKIMQYMRDLKASPSYQANVRHCMYGQDADLIMLALATHEPHFTLLREVIDFGRGRAGPGGSSANTVIKQTKEASFQLLHLSILREYLEFEFLRDVPEE-EREVHLERIVDDFVFLTFLVGNDFLPHLPSLDISEHAFDKLFELYGEQYRTWEGQGYLTNRGEID-IEHLQAFLDAIGAMEDDILKAREEDVADFNARRRRTQKKFGVRGAEVPSEEALAEIEAEAQSKYEMAMAVAVKKGEISKERARVLLGFAPIPVDKEGSGPDGGGTKKGKAEQALSVPEPVKKNFRGRYYFEKLGVLDPECSPVVQDLCKRYAEGLAWCLAYYVKGCVSWKWFFPYHYGPLISDVKNLAGAVGSLKFELGEPFLPFEQLLSCLPAASAKFLPRRYQFLMTNPTSPIVDFYPEEFKVDMNGKHNPWEGVVLIPFIDETRLREAIKKYCPESSLTSDEKKRNSFGKILTFRHSPALSLTVPSCNPAL-FPDLTHSQTT--VTPSSYSPASLTSFAPCLVPGTVIPLPGFPSLKVLPIQEVEIKALKVNVNGSDSRYRTICLSL---PVTSLPAIETLAPEIVGRPVYVNWPMMHEARITAVTNGKTA---------------------------------------WDVFIEKEQKAYLNGRGTVGQGGVDLGKVEMTLKVRALQGLERCPATGSTKKVFGTHEADVPIQLAMWSVPTADPRFIEQGPVPLLDRLPLGAEVVVLEEGKLKGMTGKVVGYNKGGQEQVKVELACGEPDRPIGLLARKAFGNKFFDAGEVIRALNIDGRVLGKVTGSCFVNPGKHDLGLNLKVRSKWVLPDYVR---RKAVAGAGSGKAWAAAVDVVRIVGSAETGEEGDTEPGGVPWEYSEKAVLLLRAYMDAFPRLFEELRRRPNEVNYEGQRLFGANCAAELEKIRTWLATQVTANMPRVPLTTQVLSREAIRAIERSADELQAKAKKAGAKYVKVVAVELSPEKVHCALSHKPSDVARRLAGK-PELGDRVVNLTGLGVPFGLRGTVVALHTQTACVEVLFDQEFIGGTSLQGTCSPYRGKFLPWSALLK 1204
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA) HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0 Identity = 578/1230 (46.99%), Postives = 767/1230 (62.36%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEA-KLLAESKGEVVDDKA--VFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAI----------GYVPEAGDGGKDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAHRAGK-VDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCI-----------FRKEAAWSTSDTVRVVGSAPEAGDMEASS-------WEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPMDTG---GEQPDLGDRIVNMRAKGVPFGVWGTVVACH-SHSGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKI 3903
MGVPKFYRWISERY KIN+I SDS LLPEFD+LYLDMNGI+H CTHP+ +S +SERD++LG+ HY+DRI+T IV+PR +YMAIDGVAPRAK+NQQRSRRFR+ KDM EA K L + + + + K +FDSNCITPGTEFMA++S+ ++YFI KK+ EDPLW+ L + FSGHE+PGEGEHKIM +IR R+ PN RHC+YGQDADLI+LGLVTHEPHFT+LREVV+F S K A KVV K T++A FQLLHLSVLREY++ EF +D +D ER +DDFVF+TFLVGNDFLPH+ +LDIGE AF LLFQIY + WG YLT G I RLE +L +G E R +A++ + RK +KR G +E PS+AE+ E Q Y + D + G+ P G KD+KGRYYFEK +TP+ E LR AY+EGL+WCLAYYYRGC+SWGWFFP+HY PM+SDL L E F ++F +G+P LPF+QL+ CLP ASA+ +PK Y LM +P+SPII FYP FE+DMNGK+NPWE VN+LPFI+ L +K+ L+ E RN G++ Y D + + + IGL DI C++ ++P G F+PEL + +P GFPSL+VL + S + + V CFG S+Y T++L L + P +PP LA +L RS ++NWP+MHE V ISD+ E L + + + E +W + E Y+ G VPGSGG+ I +V++ L+ PLQGM+ + + G+ +K FGKEEAEVP+ +VLW PA DPRF ER +TL ERFP+ S V L G GC GEVV GK V V PPE PFGLA+ +S+ ++ A + L I +FGRI S+ G DLGLNLK + + GY+R F+K AW + D++ V+GSA GD A WE++ +AI+LI Y + FPQLF L + GE+ ++A + G + ++ +WL++ E+A L R+P+ T + R AV AVE+ D+R L K K++L+K + + L + TD + + E P+LGDR+VN+ G+PFG GTVV H + +GCVE+V DEEF+GG +L G+CSN+RG L WA + +I
Sbjct: 1 MGVPKFYRWISERYTKINEIVSDSALLPEFDHLYLDMNGIIHGCTHPSHMDISDVISERDMMLGIMHYLDRIITQIVKPRVSVYMAIDGVAPRAKLNQQRSRRFRSAKDMAEATKDLPKERDDSGNIKKPDLFDSNCITPGTEFMARVSETIKYFIRKKIKEDPLWRDLKIIFSGHELPGEGEHKIMEHIRMMRNEPNYQPNNRHCIYGQDADLIMLGLVTHEPHFTILREVVDFSGGFSN-KNALKVVKKQTKEADFQLLHLSVLREYLYLEFCKDA---APGVLDLERTIDDFVFMTFLVGNDFLPHLTTLDIGEGAFDLLFQIYMEHRSHWGEGQYLTENGNISDPARLETYLAAIGSVETETLENREVTDAKYLKKKRKWNKRDG-LDEGPSDAELKAAEDAKQGDYLSMIQDLMEKHADGPFVDGWTPPQ-PGEKDFKGRYYFEKMKLTPLDLEGQYALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRELPEMFEKIQFTVGKPILPFQQLMSCLPPASASLVPKPYRTLMTAPDSPIIQFYPTSFEVDMNGKKNPWEGVNLLPFIEINLLLDTIKKFASDDKLTDPERHRNRLGEIFCYTFDLTATDTVEAPHKGIGLTDIVKCNSQVTILPQYDAEGISFKPELIAGTQIPYPGFPSLNVLPITSAELAPIGVRCFGFPSKYPTMILNLHQMPEMPPVETLADNLLNRSLFINWPMMHEGKVTAISDDTTEVYL-------------------FKGKKKVKKWNKIEKDQWARESDEMVQNYLGGINVPGSGGIQIQEVKIRLRLLPLQGMKTNASNGSSKKYFGKEEAEVPLQLVLWQAPAPDPRFEERGPMTLHERFPVDSNVV-LTKGKYKGCVGEVVGIADGKKVGVKVLTIPPEVPFGLALARSINESFVPSADAARILKIPSMIFGRITSSLPFVQGNYDLGLNLKSSDGLCVAGYTRSKKHSWKGNGEKDFKK--AWDSGDSLLVIGSARALGDNNAKGAIAERLQWEYTPKAIRLINEYRQQFPQLFSALGKLQGEKKYDAKKVFGRNEIEMLAKIREWLNKNESAKLPRIPIHTEVMPREAVTAVEKTTDIRNLQLKKKGFPKESLVK-IPGNALYRENSTSATDVMLASDHNENEAPELGDRVVNLCVSGIPFGARGTVVGIHKATTGCVEIVMDEEFVGGTSLQGLCSNFRGKLAVWAHLMRI 1201
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK) HSP 1 Score: 998 bits (2580), Expect = 0.000e+0 Identity = 531/1091 (48.67%), Postives = 684/1091 (62.69%), Query Frame = 1
Query: 709 FDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDAIGYV---PEAGDGGKDYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVP---FSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVVAH--RAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIFRKEAAWSTSDTVRVVGSAPEAGDME--ASSWEFSLEAIKLITRYARAFPQLFHGLARTGGERFFEANTLLGPGGKAKMEEVSKWLSELETAGLQRVPLTTRALSRNAVKAVERGADVRQAVLVKNAMIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGE----------------QPDLGDRIVNMRAKGVPFGVWGTVVACHSHSGCVEVVFDEEFIGGGTLHGMCSNYRGALVPWAAVAKI 3903
FDSNCITPGT +MAK+S+HL+YF+ +K+ EDPLW+ LTV +SG EVPGEGEHKIM YIR +R+AG P N RHCMYGQDADL++LGL+THEPHFTLLREV++FG A + + A +K T A FQLLHLSVLREY+ EF+R+ PQ T +D ER++DDFVF+TFLVGNDFLPHMPSLDIGE AF LF IYRSL WG GYLT G + DRLE+FL +G+ ED IF+ERA E EF+ R R ++RFG A PSE E ++A+ + + +A+G P D G +K YY EK G+ P H + HDRLR AY+EGL+WCLAYYY GCVSWGWF+P+HY P+ISDLT LR FA VKFD G+PF PF QLLGCLP AS FLP Y +LM SPIIDFYPEDF++D NGKRNPWEAVN+LPFID+ R+RAAV CP L+ EE RN G V+ Y+HDPA + SCNPEIGL D+ C+++ +P F L P +P G+PSL L V + +NCFG+ SRY+TLVL+L P +P A A ++LGR+ ++NWP +HEALVVG D+ R ++V S D +W +E+ Y+ GRGVPG+GG D+G V L L RPLQGMR DP TG KV+G +EA+VP + L ++PA DPRF E+E L ER P+G+RV + G G G+V H V+ + R PEPPFGL I +S++ Y + ++LG++ VFG++VGSV ++PG++++GLNLK NG++QLLGYSRC+ ++ AAW D V++VG+A E G E W+FS +A +L+ Y R FPQ+FH LAR G R + A LLGP + + + WL+ TA + R PL T A K LL+ + P A+++A A GG +P LG R+ ++ GVPFG+WGTVVA H HS CVEVVFD EF+GGG L G+C+ +RG L+PWAA+ +
Sbjct: 7 FDSNCITPGTAWMAKVSRHLQYFVRRKIKEDPLWQRLTVIYSGMEVPGEGEHKIMNYIRHQRAAGVFPANCRHCMYGQDADLVMLGLITHEPHFTLLREVIDFG--AFKRRSAGGPQMKQTSKAAFQLLHLSVLREYLALEFSREQPQRT---LDPERLIDDFVFMTFLVGNDFLPHMPSLDIGEHAFDRLFGIYRSLLAQWGEGGYLTDAGKLRDPDRLEQFLKCIGDMEDEIFAERAAEVEEFKSRRRGRNERFGAAPSGPSEEEEEAQKAQTRAEVHARLQEAMGAEAAPPAPEDMG--FKVAYYMEKLGLAPNHHQFHDRLRQAYIEGLIWCLAYYYEGCVSWGWFYPYHYGPLISDLTDLRRRFAQVKFDKGQPFTPFFQLLGCLPAASGKFLPAPYRKLMTEETSPIIDFYPEDFKVDANGKRNPWEAVNLLPFIDADRMRAAVAAHCPDRLLTEEERRRNRIGPVLLYHHDPANTATIPSCNPEIGLPDLLRCASSIVELPTNAFEDVAEGTLHSALRPGVTLPLPGYPSLATLPRRGVRAEAIGLNCFGSGSRYQTLVLDLDPPAQVPTAEEAARELLGRTVFVNWPNLHEALVVGAQDQHTAAR-REVDSQGNPYVTTLGNDP-------------DTQAKWAFLVDDERRRYLGGRGVPGTGGADVGPVALQLAVRPLQGMRQDPLTGRTHKVWGTQEAQVPYQLALRAHPAPDPRFREKEGPPLPERVPVGARVVFVRGAF-RGLSGQVEGHDVEQNTCRVVVEERDPEPPFGLNIARSIQEQYVPAPQLARALGLRGDVFGKVVGSVRIEPGRIEVGLNLKWNGQFQLLGYSRCLLKRRAAWKEGDAVKIVGTAEEDGGEEDLRGDWQFSRKAGELLVDYQRNFPQVFHALARAGHARHYSAEQLLGPRHEEVLPRLQAWLAARPTAKMPRSPLATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXK-LLRGVAPD---AFELASGGGAEEGCGGAAAADAEVLPPARPPQPKPALGMRVCSLARIGVPFGLWGTVVAIHPHSACVEVVFDAEFLGGGPLGGLCAPHRGKLLPWAALLPV 1071
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA) HSP 1 Score: 966 bits (2498), Expect = 0.000e+0 Identity = 513/1019 (50.34%), Postives = 659/1019 (64.67%), Query Frame = 1
Query: 322 MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLLAESK---GEVVDD----KAVFDSNCITPGTEFMAKISKHLRYFIHKKMTEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRGKKASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDVPQETEAAMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSDGYLTREGTIDSADRLEEFLTEVGEREDGIFSERADEEAEFRGRLRKTSKRFGRAEEVPSEAEIALEEAKLQRTY----EKAMVDAIGYVPEAGDGGK--------DYKGRYYFEKFGITPVHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDLTGLRETFAAVKFDLGEPFLPFEQLLGCLPGASANFLPKSYAQLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDSYRLRAAVKELCPPTALSPEEAERNTRGQVVEYYHDPAMSRKEMSCNPEIGLADISHCSTASRVVPFSIEPGECFRPELPPDSIVPSAGFPSLHVLTVGSVDERKVPVNCFGTASRYETLVLELKRPPVLPPASALAGKVLGRSAYLNWPLMHEALVVGISDEKEEYRLKDVRSSXXXXXXXXXXXXXXXXRTDARTFAADEAGRWRLRAAEEQGAYVTGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSNPAEDPRFAEREDITLEERFPLGSRVTCLHGGNGHGCGGEVV-AHRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQYKACQSLGIKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCI------FRKEA-AWSTSDTVRVVGSAPEAGD 3297
MGVPKFYRW+SERYPKINQ+ ++ LLPEFD+LYLDMNGI+H CTHPN +S LSERD++LG+ HY+DRI+T IV+P+ ++MAIDGVAPRAK+NQQRSRRFR+ KD+ EA + K G ++D FDSNCITPGTEF+ +IS +RYFI KK+ EDP W+ L+V FSG +VPGEGEHKIM +IRD R+ PNTRHCMYGQDADLI+LGLV+HEPHFTLLRE+++F SR A K V K T+ + FQLLHLS+LREY+ EF V + + D ER++DDFVF+TFLVGNDFLPHMP+LDIG+ AF+LLF Y+ + WG+ YLT G I A RLE FL +G E IF ERA E + + R+ KR + PS+ E+ +E Q Y + M D EA DG K D+KGRYYFEK + P + H LR +Y+EGL+WCLAYYYRGC+SWGWF+P+HY PMISDLT L + F+ + F++GEP PF+QL+GCLP ASA +PK Y +LM SPESPI FYPEDF +DMNGKRNPWE VN+LPFID L+ + + CP +AL+ +E RN G+V Y +D A++ SCN +IGL +I C++ ++ F+PEL P + +P GFPSL+VL + V+ R VNCFG S+Y ++L + P +P A LA ++GR+ ++NWP+MHEA VV +SD E R +S R + E RW + + YV G PGSGG+ IG VQ+ LK PLQGM+ P G+ +K+FGKEEA+VP+ M L+S+PA DPRF E + L+ERFP RV L G GC G V+ A KV V + PPEPPFGLAI +SV+ +Y S A + L I P+VFG+I GS+ PGK DLGLNLK + +LGY+R +K+A AWS DTV +VGS + D
Sbjct: 1 MGVPKFYRWLSERYPKINQVITNEALLPEFDHLYLDMNGIIHGCTHPNHLDVSDVLSERDMVLGIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSAKDLAEATKATKLKPLDGTDLNDADPYSGAFDSNCITPGTEFLLRISDCIRYFIRKKIKEDPQWRNLSVIFSGPDVPGEGEHKIMQHIRDMRNQPGYQPNTRHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSGGFSRNDNALKEVKKFTKQSDFQLLHLSILREYLQLEF---VYKHDPSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYKEHREKWGNGQYLTNAGEISDAARLEAFLEVIGAAESDIFEERAKNEVKMLKKQRQWDKRDKKPGRTPSDLELNAKEESKQNDYMSMVQGMMADISLKGTEAVDGWKAPTNLSEKDHKGRYYFEKLHLKPTDVDDHLALRKSYIEGLIWCLAYYYRGCISWGWFYPYHYGPMISDLTNLPDVFSKINFEIGEPLKPFQQLMGCLPPASAALVPKIYRKLMGSPESPIKQFYPEDFVVDMNGKRNPWEGVNILPFIDGNLLKQTIAKHCPDSALTADERHRNRVGKVYCYTYDAAVNDTVPSCNRDIGLPNIVKCNSRVDIIENLSVSNISFKPELVPGTKIPYPGFPSLNVLPIEHVELRNAGVNCFGFPSKYPNMILTMHTLPQMPGAVQLAENLIGRNIFVNWPMMHEAKVVAVSDSTCEVRKPKGKSK-------------------TRNLSPPEVERWNSMSEMMKEQYVAGASYPGSGGISIGDVQIRLKVVPLQGMKTSPIDGSSKKLFGKEEADVPLQMALFSSPAPDPRFVECGPMQLKERFPPKCRVI-LTKGKYRGCTGTVLGAVDDEKVGVKVQVIPPEPPFGLAIARSVQESYISSMDAAKVLKIDPRVFGKITGSLFFSPGKYDLGLNLKYKDKRCVLGYTRVKPDANKNKKKDANAWSAGDTVLIVGSKRMSND 996 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig162.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig162.6.3 >prot_P-littoralis_Contig162.6.3 ID=prot_P-littoralis_Contig162.6.3|Name=mRNA_P-littoralis_Contig162.6.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2072bp MGVPKFYRWISERYPKINQIASDSTLLPEFDNLYLDMNGILHTCTHPNDDback to top mRNA from alignment at P-littoralis_Contig162:15982..61636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig162.6.3 ID=mRNA_P-littoralis_Contig162.6.3|Name=mRNA_P-littoralis_Contig162.6.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=45655bp|location=Sequence derived from alignment at P-littoralis_Contig162:15982..61636- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig162:15982..61636- >mRNA_P-littoralis_Contig162.6.3 ID=mRNA_P-littoralis_Contig162.6.3|Name=mRNA_P-littoralis_Contig162.6.3|organism=Pylaiella littoralis U1_48|type=CDS|length=6216bp|location=Sequence derived from alignment at P-littoralis_Contig162:15982..61636- (Pylaiella littoralis U1_48)back to top |