mRNA_P-littoralis_Contig1611.2.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: A0A165ULN5_9HYPH (EamA-like transporter family protein n=1 Tax=Pseudovibrio axinellae TaxID=989403 RepID=A0A165ULN5_9HYPH) HSP 1 Score: 213 bits (542), Expect = 7.330e-65 Identity = 115/245 (46.94%), Postives = 170/245 (69.39%), Query Frame = 1
Query: 10 PSTNGSTDNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
P +G TDN+ LA+S I +V +LSL DA++K +S F +WQ++VLRS++ +P+L +F+K ++ L+ +P A+GWV LRS + M YY+ALP+L LSVAAAAY TLP+FIIL SA++ K +I +GW A+ +GF GVL +L+P FN+Y LLPL AVL+A AM+LTRTKC++ +PL+L++ +N F+ +G V LSLL + P+ +G FLL W + E + + +LA IL+G+
Sbjct: 5 PQASGYTDNLPLAVSVITLSVLALSLSDALVKLMSGQFVIWQIFVLRSLLVLPVLFLFLKLKNPALLSVPTALGWVALRSLMLVGMWIAYYLALPNLNLSVAAAAYYTLPIFIILFSAVITKDRICFLGWVAVLIGFCGVLLILQPRAGDFNMYTLLPLLSAVLYACAMILTRTKCRSVHPLMLSVALNISFVVVGSLVALSLLLIA-PEQRIG---FLLSPWTKMAVAEWVLMAMLAVAILIGS 245
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: UPI00167A147E (DMT family transporter n=1 Tax=Pseudovibrio japonicus TaxID=366534 RepID=UPI00167A147E) HSP 1 Score: 212 bits (540), Expect = 1.750e-64 Identity = 115/238 (48.32%), Postives = 170/238 (71.43%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
DNI LA++ IIF V LSLGDA+IK S +F +WQ++VLRS++ +P+LL++++ R ++ IP A+GW +LRS + M YY+ALP+L LS+AAAAY TLP+FI+L SAI++ KI +GW A+ LGFVGVL +LRP E FNL+ALLPL AVL+A AM+LTRTKC+ NP++L++ +N FI +G ++++ + +P+ G FLL W + + E +++ ++A ILVG+
Sbjct: 12 DNIPLAVATIIFTVLVLSLGDALIKFSSRNFVIWQIFVLRSLLVLPVLLVYMRLRSPEILTIPPALGWAVLRSLLLVGMWVAYYVALPNLDLSIAAAAYYTLPIFIVLFSAILVGDKISILGWLAVILGFVGVLLILRPKAENFNLHALLPLVSAVLYALAMILTRTKCRAVNPVMLSVMLNCCFIVVGALAAITIV-IFMPEPREG---FLLAPWTQMASSEWLSISLMAIAILVGS 245
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: A0A2E2RJ74_9HYPH (Permease n=1 Tax=Ahrensia sp. TaxID=1872419 RepID=A0A2E2RJ74_9HYPH) HSP 1 Score: 212 bits (540), Expect = 1.970e-64 Identity = 119/238 (50.00%), Postives = 162/238 (68.07%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
DN A++AI+F+V +LSLGDAIIK+ISV PLWQLYVLRS+ +P+L + + + LIP+ W LRS + AM YY +LPHLQLS+AAAAY T PLFI L SA + +++ WFAI LGF GV+ +LRP +GF+ +ALLP+ AV +A AM+LTRT+C+ E+PL+L++ +N FI +G +L LL ++L D V VN FL GGW +G + AL IL +LVG+
Sbjct: 11 DNTAAAVAAILFSVAALSLGDAIIKAISVDIPLWQLYVLRSLFVLPVLAAMVGLKAGTVRLIPRKALWTALRSLLLVAMWVAYYASLPHLQLSLAAAAYYTSPLFITLFSAGLAGERVGARRWFAIALGFAGVVVMLRPDAQGFDAWALLPVAAAVCYALAMILTRTRCRDEDPLILSMALNIAFILVGGIASLVLLQMDLSADRVAVNPFLFGGWTDLGGMSWAALAILGAAMLVGS 248
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: A0A2A4ZSL2_9RHOB (Permease n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2A4ZSL2_9RHOB) HSP 1 Score: 207 bits (526), Expect = 2.050e-62 Identity = 109/238 (45.80%), Postives = 164/238 (68.91%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
DN+ LA++ I+F V +LSLGDA+IK S F +WQ++VLRS++ +P+L +++ + + IP +GW++LRS + +M YY+ALPHL+LS+AAAAY TLP+FI L SA ++ ++I P+GW A+ +GF+GVL +LRP FNL+ALLPL AVL+A AM+LTRTKC+ NP +L++ +N F+ +G+ L ++ P G F+L W +G E I++ +LA ILVG+
Sbjct: 15 DNLPLAVTVIVFTVLALSLGDALIKFTSSEFVIWQIFVLRSLLVLPVLFFYLRLKAPDALTIPPVLGWIVLRSLMLVSMWVAYYLALPHLKLSIAAAAYYTLPIFITLFSAAIIGERISPLGWTAVFIGFLGVLLILRPKAGDFNLFALLPLVSAVLYALAMILTRTKCRAVNPFMLSIALNIAFVVVGMLAALFIMVFA-PNPREG---FMLAPWAAMGHSEWISMGLLACAILVGS 248
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: A0A7R6SVR9_9GAMM (EamA domain-containing protein n=1 Tax=Neptunomonas japonica JAMM 1380 TaxID=1441457 RepID=A0A7R6SVR9_9GAMM) HSP 1 Score: 206 bits (525), Expect = 5.780e-62 Identity = 117/243 (48.15%), Postives = 158/243 (65.02%), Query Frame = 1
Query: 16 TNGSTDNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
T D I+ AI II VF+L+LGDAIIK +S SF LWQ++ LRS IA P+L+ +K R ++P W +LRS + M TYY +LPH+ LSVAAAAY TLPLFI + +++ L I IGW I LGFVGVL +L+P IE FN YALLP+ A+L+A AM+LTR++CK+EN +VL+L++N M + G +TL L+ L +V EFL G W + E + + IL+ ILVG+
Sbjct: 5 TKHEADRIRSAIVTIILTVFALALGDAIIKGVSASFTLWQIFFLRSAIAAPILVAVLKTRKQLTFILPNHFWWTMLRSLMLTLMWVTYYASLPHVNLSVAAAAYYTLPLFITIFASVFLGDTIGKIGWLEIALGFVGVLMVLQPRIEDFNWYALLPVSSAILYALAMVLTRSRCKSENVIVLSLWLNLMMLFTGAILTLVLMLLQPSPQVVEGQEFLFGPWSEMSDKEWVVIGILSVAILVGS 247
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: A0A437QX30_9PROT (DMT family transporter n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QX30_9PROT) HSP 1 Score: 203 bits (517), Expect = 6.930e-61 Identity = 115/238 (48.32%), Postives = 156/238 (65.55%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
DN+ LA+ I+F VF+LSLGDA IK S F LWQ++VLRS+IA+P+LL ++ + L+P GWV LRS + AM YY +LPHLQLSVAAAAY TLPLFI L +A+ +I +GW A+ GFVGVL +LRP +GF ++ALLPL A+L+ AMLLTRTKC+ ENPLVL+L +N FI +G+ T + + LL W + L+ + + +LA +IL+G+
Sbjct: 13 DNLPLAVGTIVFTVFALSLGDAAIKLTSGHFALWQVFVLRSIIAVPVLLAILRTTNHSHGLLPGNPGWVALRSLMLVAMWVCYYASLPHLQLSVAAAAYYTLPLFITLFAALFTGDRITTLGWVAVSAGFVGVLLILRPDADGFGIHALLPLVAAMLYGGAMLLTRTKCRAENPLVLSLHLNLAFIIVGLAATALTVTWGASPEGDPEPSGLLAPWAAMNGLDWLTMGLLAGSILIGS 250
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: K2KKY5_9PROT (Uncharacterized protein n=5 Tax=Thalassospira TaxID=168934 RepID=K2KKY5_9PROT) HSP 1 Score: 202 bits (513), Expect = 1.750e-60 Identity = 115/238 (48.32%), Postives = 159/238 (66.81%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
D + LA+ IIF VF+LSLGDA+IK S F +WQ++V+RS IAIP L+ ++ R + + A GW LRS + M YY++LPHL LSVAAA Y TLP+FI L SAI + KI GWFA+ +GF GVLF+LRP E FN YALLPLF A+L+A AM+LTRTKC+ E+P+ L+L +N F+A+G ++ L +++ D + + FLL W T+ + + ILA +IL+G+
Sbjct: 13 DRVPLAVGTIIFTVFALSLGDALIKQSSSQFVIWQIFVIRSAIAIPFLVGYLAIRAPSALRLGHAFGWTTLRSLLLVVMWVCYYLSLPHLTLSVAAATYYTLPIFITLFSAITTRTKISKTGWFAVIIGFAGVLFILRPDAENFNGYALLPLFAAMLYAVAMILTRTKCRDEHPIKLSLALNIDFVAVG---AIAALVISMLSDDMR-DGFLLAPWSTMTLTGLGTMAILAASILIGS 246
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: A0A6I1E5V2_9RHOB (DMT family transporter n=2 Tax=Amylibacter sp. SFDW26 TaxID=2652722 RepID=A0A6I1E5V2_9RHOB) HSP 1 Score: 201 bits (512), Expect = 2.340e-60 Identity = 112/238 (47.06%), Postives = 158/238 (66.39%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
D + A+ I+F VF+LSLGDA+IK+ S + LWQ++VLRS + IPLL ++ ++S + +IP A W L+RS ++ M YY ALPHLQLSVAAAAY TLP+FI L SA+ + +K++P+GW A+ LGF GV +L+P + FN YALLPL AVL+A +M+LTRTKC E+PLVL+L +N F+ +G+ L+ LN FL WV + + + L +LA IL+G+
Sbjct: 10 DRTRFAVMVIVFTVFALSLGDALIKNSSANLVLWQIFVLRSCLIIPLLFGILRMKYSTVGIIPTAFIWTLIRSLMLSFMWVIYYAALPHLQLSVAAAAYYTLPIFITLFSALFVGEKVKPLGWLAVLLGFCGVGLILQPKADDFNFYALLPLASAVLYALSMILTRTKCSNEHPLVLSLALNISFVVVGL---LAPALLNFASFTPDAGSFLSTSWVVLTQSDFMVLIVLAIAILIGS 244
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: UPI001A0D8DBF (DMT family transporter n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI001A0D8DBF) HSP 1 Score: 201 bits (511), Expect = 3.400e-60 Identity = 112/239 (46.86%), Postives = 160/239 (66.95%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNLPQDIVGVNE-FLLGGWVTIGTLEIIALFILATTILVGN 744
D + A+ I+F V +LSLGDA+IK S +F +WQL+V+RS IAIPLL ++ + + P W RS + AM +YY++LPHLQLSVAAA Y TLP+FI L SA ++ KI +GW A+ LGF+GVL +LRP FN +A+LPLF A+L+ASAM+LTRTKC+ E+P++L+L +N F+A+G S+ A+ + G E FLL WV +G + +A+ +LA +IL+G+
Sbjct: 12 DKMSFAVGTIVFTVLALSLGDALIKFTSNTFVIWQLFVVRSAIAIPLLYSYLVVKAPSALQWPSKFLWTAARSLILVAMWISYYLSLPHLQLSVAAATYYTLPIFITLFSAAIIGDKISRLGWIAVFLGFLGVLLILRPNAGDFNWFAILPLFSAILYASAMILTRTKCRAEHPIILSLALNITFVAVG-----SIAAILIEIFASGTREGFLLAAWVEMGQTQWVAMALLAISILIGS 245
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Match: UPI0019667F1D (DMT family transporter n=1 Tax=Desulfobulbus rhabdoformis TaxID=34032 RepID=UPI0019667F1D) HSP 1 Score: 201 bits (512), Expect = 4.380e-60 Identity = 113/239 (47.28%), Postives = 159/239 (66.53%), Query Frame = 1
Query: 31 DNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRSVIAIPLLLIFIKWRHSGLILIPKAIGWVLLRSFFMAAMLATYYIALPHLQLSVAAAAYNTLPLFIILLSAIVLKQKIQPIGWFAIGLGFVGVLFLLRPTIEGFNLYALLPLFGAVLHASAMLLTRTKCKTENPLVLTLFINYMFIAIGVTVTLSLLALNL-PQDIVGVNEFLLGGWVTIGTLEIIALFILATTILVGN 744
D + A+ IIF VF L+LGDAIIK IS +F LWQ++ LRS++ +P+LL+ +K+ + PK W +LRSF + M YY +LPH+ LSVAAAAY TLP+FI + +AI L I IGW AI LGFVGVL +L+P I FN YALLP+ A+L+A AM+LTR++CK EN VL+L++N IG +++ ++ + PQ VG EFL+G W +G +E + + L+ IL+G+
Sbjct: 6 DRTRSAVITIIFTVFLLALGDAIIKGISANFTLWQIFFLRSIVVVPILLVILKFSQWHAPIWPKLFWWTVLRSFLLTLMWVAYYASLPHINLSVAAAAYYTLPIFITIFAAIFLGDTIGKIGWLAIVLGFVGVLMVLQPRIVDFNWYALLPISSAILYALAMILTRSRCKFENIFVLSLWLNLSMFFIGAVISVVMMLIRQSPQVTVG-QEFLIGSWSEMGIMEWVVIAALSVAILIGS 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1611.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1611.2.1 >prot_P-littoralis_Contig1611.2.1 ID=prot_P-littoralis_Contig1611.2.1|Name=mRNA_P-littoralis_Contig1611.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=253bp MTSPSTNGSTDNIKLAISAIIFAVFSLSLGDAIIKSISVSFPLWQLYVLRback to top mRNA from alignment at P-littoralis_Contig1611:2318..3076- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1611.2.1 ID=mRNA_P-littoralis_Contig1611.2.1|Name=mRNA_P-littoralis_Contig1611.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig1611:2318..3076- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1611:2318..3076- >mRNA_P-littoralis_Contig1611.2.1 ID=mRNA_P-littoralis_Contig1611.2.1|Name=mRNA_P-littoralis_Contig1611.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=759bp|location=Sequence derived from alignment at P-littoralis_Contig1611:2318..3076- (Pylaiella littoralis U1_48)back to top |