prot_P-littoralis_Contig1611.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1611.1.1
Unique Nameprot_P-littoralis_Contig1611.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length102
Homology
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 6.550e-43
Identity = 81/102 (79.41%), Postives = 84/102 (82.35%), Query Frame = 0
Query:    1 MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKAHAKHPLCVEDTVEVEARASLDTITLRLQRQIKEPSYIYTLDTYVTHILRNVK 102
            +KYFI+GKTYVCLTND SL RRDIK MYASRWRVEE  KRLK NLKLEKAHAK P       EVEAR  LDTITLRLQ+ IKEPSYIYTLDTYVTHIL NVK
Sbjct:  225 LKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQ--EVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVK 324          
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.580e-41
Identity = 78/103 (75.73%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    1 MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKAHAKHP-LCVEDTVEVEARASLDTITLRLQRQIKEPSYIYTLDTYVTHILRNVK 102
            +KYFI+GKTYVCLTNDPSL RRDIKTMYASRWRVEE FKRLK NL+LEKAHA+ P L ++   EVEAR  LDTITLR+Q   KE SY+YTLDT+VT+ILRNVK
Sbjct:  225 LKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQ---EVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVK 324          
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 4.890e-41
Identity = 80/102 (78.43%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKAHAKHPLCVEDTVEVEARASLDTITLRLQRQIKEPSYIYTLDTYVTHILRNVK 102
            +KYFI+GKTYVCLTNDPSL RRDIKTMYASRWRVEE FKRLK NLKLEKAHAK P       EVEAR  LDTITLR+Q   KE SY+YTLDT+VTHILRNVK
Sbjct:  240 LKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQ--EVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVK 339          
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 7.080e-40
Identity = 79/102 (77.45%), Postives = 83/102 (81.37%), Query Frame = 0
Query:    1 MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKAHAKHPLCVEDTVEVEARASLDTITLRLQRQIKEPSYIYTLDTYVTHILRNVK 102
            +KYFI GKTYVCLTNDPSL RRDIKTMYA RWRVEE FKRLK NLKLEKAHAK P       EVEAR  LDTITLR+Q   KE SY+YTLDT+VTHILRNVK
Sbjct:  209 LKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQ--EVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVK 308          
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 140 bits (352), Expect = 5.020e-38
Identity = 75/103 (72.82%), Postives = 85/103 (82.52%), Query Frame = 0
Query:    1 MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKAHAKHP-LCVEDTVEVEARASLDTITLRLQRQIKEPSYIYTLDTYVTHILRNVK 102
            +KYFI+GKTYVCLT DPSL R  IKTMYASRWRVEE FKRLK NL+LEKAHA+ P L ++   EVEAR  LDTITLR+Q   KE SY+YTLDT+VT+ILRNVK
Sbjct:  225 LKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQ---EVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVK 324          
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 6.780e-23
Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    1 MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKAHAKHP-LCVEDTVEVEARASLDTITLRLQR 79
            +KY INGKTYVCLTNDP+L RRDIK +YASRWR E+   RLK N++LEKAHA+ P L ++   EVEAR  LDTITLRLQR
Sbjct:  155 VKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQ---EVEARVLLDTITLRLQR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1611.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LP60_ECTSI6.550e-4379.41EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
D8LP47_ECTSI3.580e-4175.73EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K772_9PHAE4.890e-4178.43DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE7.080e-4077.45DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
Q8QNB6_ESV1K5.020e-3872.82EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5K0K9_9PHAE6.780e-2368.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002559Transposase, IS4-likePFAMPF01609DDE_Tnp_1coord: 8..51
e-value: 9.0E-6
score: 25.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1611contigP-littoralis_Contig1611:507..812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1611.1.1mRNA_P-littoralis_Contig1611.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1611 507..1259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1611.1.1 ID=prot_P-littoralis_Contig1611.1.1|Name=mRNA_P-littoralis_Contig1611.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=102bp
MKYFINGKTYVCLTNDPSLPRRDIKTMYASRWRVEEPFKRLKLNLKLEKA
HAKHPLCVEDTVEVEARASLDTITLRLQRQIKEPSYIYTLDTYVTHILRN
VK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002559Transposase_11
IPR012337RNaseH-like_sf