mRNA_P-littoralis_Contig161.67.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 708 bits (1827), Expect = 4.840e-217 Identity = 409/669 (61.14%), Postives = 476/669 (71.15%), Query Frame = 2
Query: 3830 ATLGAVAVTQLQFMGTLSLVDNTGGEGSSLPGFTDSFRWFNLWPPASFAEEFIGTSGQGQSRRLQDGAEGAGVDSSSSECSWDDTDLSGLGSLVFIGNSALVFGALLLIFLLHVLIVSGVEAYWLAKKRAQREVARAQRREIPVGEYFYGPGLDERGQEQPRLQPQLQVQAKVPEPDDXXXXXXXXXXXXXXXLIIARRLRKN-TFLNATATTSQRRLKRMDSCDAVETSGTSTREGTWVVGEDDGEQKK----DESXXXXXXXXDTEGSDGRAHGYRRRRHRRVSAHVGSRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDN----AGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAA-RDEQM*GPAARTGPYPSPSCSELR 5806
A LGAVAVTQLQF+ TLSLVD+TGGE SSLPGF DSFRW NLWPPASFAEEFI TS +GQ RRL CSWD + L GLGSLVFIGN LVFGAL+LIFLLHV +VSGVEAYWLAKKRA+ E ARA+R + +GEYF +D R EQ A VPEPD RRLR++ + LNA AT SQRRL+++ + DA S R+G+WV +DGE+K+ D D EG G SRL PVAECR+HSRSAWLHFPHVELV LFFA+EGAVASQVSALRE GC PVM A +AL+ YP++MF+A++RT VRVRP++L+VFTP ++D+ AG+ EG A SF SKV+A EDHSLFAWA+KGTWETAET +E TRRE +WFRIGFEPLFVDFTK+GAWFVA++LVEWAALGC+GAL+DESVLQLSLFC LHT+SFLLLV +PFANS NAMGA LVGIDAVCMALLA SAS W+GT AAG+VD+ VMLLQL A CALIIP+Y+DT L L+GAIRSR++KS T +P RTEA+K E+ FVRH+IRR+W TWCTMLG NIFACASDTR+G+RPP +S A R AARTGP+P PS LR
Sbjct: 758 AILGAVAVTQLQFLATLSLVDDTGGEDSSLPGFADSFRWANLWPPASFAEEFIDTSDEGQQRRLXXXXXXXXXXG----CSWDGS-LGGLGSLVFIGNQGLVFGALVLIFLLHVSLVSGVEAYWLAKKRAKEEAARARRLGVSIGEYFSDTHVDGREHEQ----------APVPEPDARPSGGTTDISVASSFR--RRRLRRDPSLLNAAATGSQRRLEKLPALDAPHRSR-KVRDGSWVA--EDGEKKEARSDDNLSGTDCSDYDEEGGGGLG----------TLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEG--QRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLILIGAIRSRLQKSTTTTPQHVRTEAEKEEDLFVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPPGTSMAEDRLATSTARAARTGPFPMPSALRLR 1394
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 3.430e-145 Identity = 296/576 (51.39%), Postives = 354/576 (61.46%), Query Frame = 2
Query: 4208 KKRAQREVARAQRREIPVGEYFYGPGLDERGQEQPRLQPQLQVQAKVPEPDDXXXXXXXXXXXXXXXLIIARRLRKN-TFLNATATTSQRRLKRMDSCDAVETSGTSTREGTWVVGEDDGEQKKDESXXXXXXXX----DTEGSDGRAHGYRRRRHRRVSAHVGSRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVE------------------WAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFAN--------------------SAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAA-RDEQM*GPAARTGPYPSPSCSEL 5803
+KR++ E ARA+R + +GEYF +D R +Q A VPEPD RRLR + + LNA AT SQRR K+ + D S R+G+WV G DGE+K S D EG G SRL VAECR+HS+ AWLHFPHVELV LFFA+EGAVASQVSALRE GC PVM A +AL+ YP++MF+A++RT VRVRP++ +VF SKV+A EDHSLFAWA+KGTWETAET +E RRE +WFRIGFEPLFVDFTK+GAWFVA++LVE WAALGC+GAL+DESVLQLSLFC LHT+SFLLLV +PFAN S NAMGA LVGIDAVCMALLA SAS W+GT AAG+VD+AVMLLQL A CALIIP+Y+DT L L+ AIRSR++K T +P RTEA+K+E+ FVRH+IRR+W TWCT+LG NIFACASDT +G+RPP +S A R AARTGP+P PS L
Sbjct: 21 QKRSKEEAARARRLGVSIGEYFNDTHVDGREHKQ----------APVPEPDARPSGGTTDISAAS---FFRRRLRTDRSLLNAAATGSQRRRKKRPALDPPNRSR-KARDGSWVAG--DGEKKATRSDDILSDTDCSDYDEEGGGGLG----------TLTRAESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF------------------------LSKVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLMLIEAIRSRLQKCTTTAPQHVRTEAEKVEDLFVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPPGTSTAEDRLAATTMRAARTGPFPMPSALRL 546
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 422 bits (1086), Expect = 2.910e-126 Identity = 276/657 (42.01%), Postives = 363/657 (55.25%), Query Frame = 2
Query: 3812 NARAPSATLGAVAVTQLQFMGTLSLVDNTGGEGSSLPGFTDSFRWFNLWPPASFAEEFIGTSGQGQSRRLQDGAEGAGVDSSSSECSWDDTDLSGLGSLVFIGNSALVFGALLLIFLLHVLIVSGVEAYWLAKKRAQREVARAQRREIPVGEYFYGPGLDERGQEQPRLQPQLQVQAKVPEPDDXXXXXXXXXXXXXXXLIIARRLRKNTFLNATATTSQRRLKRMDSCDAVETSGTSTREGTWVVGEDDGEQKKDESXXXXXXXXDTEGSDGRAHGYRRRRHRRVSAHVGSRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRK-SATNSPPASRTEADKLEER-FVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGP 5776
+ RAPS T+ + +TQ+QF+ TLSLVD+TG E S L T + RW NLWPP S F S G+ QDG+ G++ T S +G+LVF+GN L LL I ++H+++VS VEAYWL+K+RA E+ +AQRR IP+ GL R + P + +PD+ L A+A+ + + D+V+ V E+DG + S G R + +A+CR S S WL+FPH+EL+ L FAFEGA+ASQ++ +R GGC V A +L++YPV+M I RT VRV PD+L+VF P GE+ G SF SKV+ +EDHS+FAWA+ G WET ET DEET RE + FRIGFEPLFVDFTK +WF Y L+E + C LVD+SV+QL LFCGLH++SFLLLV +PFANS N MGACL IDA MA+LA +A W T A R+DTAV++LQLVA ALIIP+Y+D ++GAIR ++R + +N+ RTE + EER F+R YI RAW PTWC MLG+N+ AC +DT G R +S AARTGP
Sbjct: 44 SVRAPSVTIAVLLLTQIQFLATLSLVDSTGAEDSLLSELTQNLRWVNLWPPDSVGRTF---SSGGERLFQQDGSRACGIEP---------TSASDIGALVFLGNIGLFTSLLLGIVVIHIVLVSAVEAYWLSKERAMEELTKAQRRGIPIR------GLGARRASRVAHSPDAES-----DPDE---------------------------LAASASNDGAMSREHAAADSVDVG---------VDFEEDGIPIR-------------------------------SRPKGLRAM-LADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFKP-----VGEEENHGTDGTVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTVILGAIREKIRSLTKSNTCDDGRTEEEAKEERKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRRVNTS-----------AARTGP 593
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE) HSP 1 Score: 383 bits (984), Expect = 2.760e-104 Identity = 268/682 (39.30%), Postives = 354/682 (51.91%), Query Frame = 2
Query: 3818 RAPSATLGAVAVTQLQFMGTLSLVDNTGGEGSSLPGFTDSFRWFNLWPPASFAEEFIG---------TSGQGQSRRLQDGAEGAGVDSSSSECSWDDTDLSGLGSLVFIGNSALVFGALLLIFLLHVLIVSGVEAYWLAKKRAQREVARAQRREIPVGEYFYGPGLDERGQEQPRLQ-PQLQVQAKVPEPDDXXXXXXXXXXXXXXXLIIARRLRKNTFLNATATTSQRRLKRMDSCDAVETSGTSTREGTWVVGEDDGEQKKDESXXXXXXXXDTEGSDGRAHGYRRRRHRRVSAHVGSRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLL---------YPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGPYPSPSCSELR 5806
R PS+T+ V +Q+QF+ TLS VD+TG EGS+L G T + RW NLWP SF+E TSG+ D +E G DS+ SW T +S +GS +F+GN AL G ++IF +H+L+ S VEAYWLAK+RA+ E+ RA +G G +Q PQL +P D R DS + E + T+TR GS + V+ECR+ S+SAWLH+PH+ELV LFFAFEGAV SQVSALR S V AAVA L ++ FI VRVR D+L+VFT + +D EG S K + +SK+ ++D SLFAWADKG W T +TADE+ RR+A+WFRIGFEPL+ DFT+AG+WF Y+L+EWA L C+ LVD S +Q LFC LH+++F+LLV +PFANS N MGA ++ DAVCM +LA SA + T AA R+D VM+ Q + L++P+YVDTLL + GAIR+R T A R E + F+ R W TW M+G+N+FAC DTR+G+R P SR R +++ A + GPYP S LR
Sbjct: 98 RNPSSTMALVLTSQIQFLATLSFVDDTGVEGSALSGLTKNLRWVNLWPSQSFSEGVASWVLCNEPEPTSGE------DDDSEEDG-DSTQRGISW--TVISDVGSFLFMGNLALFAGFFVIIFSVHILLASAVEAYWLAKQRARNEIPRA------LGGDLSTSGSSTAWSGTRAIQSPQLMEHQALPSWDSTG--------------------------------------RNDSTNVQEAARTNTR-------------------------------------------------AGSSIGQVSECRELSQSAWLHYPHLELVFLFFAFEGAVTSQVSALRSTSSSTVFY-AAVATLTGCNLSRIATMSILGFILFDVRGRVRVRSDALIVFTSNKTD------EG---STGKSTLYSKMVTGLKKDSSLFAWADKGHWNTVQTADEDARRDADWFRIGFEPLYADFTQAGSWFTVYTLIEWATLACIAVLVDNSAVQCGLFCALHSMTFILLVVCKPFANSVLNTMGAIVMLTDAVCMGMLALSAGTFRMTAAADRIDIVVMVAQHLCIAVLVVPLYVDTLLLVWGAIRNRRGPVKTRDNAAQRAERE-----FINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDPTGSR--RQDRL--RAGQIGPYPEWSLKNLR 658
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: D8LN89_ECTSI (Liver stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI) HSP 1 Score: 386 bits (991), Expect = 7.510e-104 Identity = 265/678 (39.09%), Postives = 357/678 (52.65%), Query Frame = 2
Query: 3806 NQNARAPSATLGAVAVTQLQFMGTLSLVDNTGGEGSSLPGFTDSFRWFNLWPPASFAEEFIGTSGQGQSRRLQDGAEGA---------------GVDSSSSECSWDDTDLSGLGSLVFIGNSALVFGALLLIFLLHVLIVSGVEAYWLAKKRAQREVARAQRREIPVGEYFYGPGLDERGQEQPRLQPQLQVQAKVPEPDDXXXXXXXXXXXXXXXLIIARRLRKNTFLNATATTSQRRLKRMDSCDAVETSGTSTREGTWVVGEDDGEQKKDESXXXXXXXXDTEGSDGRAHGYRRRRHRRVSAHVG-SRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSD--NAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GP-AARTGPYP 5782
+ + R PS T+ VA+ QLQF+ TLSLV NTG E S L F ++ RW NLWPPASFA F S G+ + + A GV++ S L S VF+GN L L +IFL+H+ + SG+EAYWLAK+ A++ VARAQRR +PV E + A++ P SQR L+ +TSG +D+GE DT+ +G + VG S+L +AECR+ S+S WLHFPHVEL+ L FAFEGAVA+QVSA+RE V+ +A +ALL +PV+M ++ T ++R +VF P+ D A D+ V S F SKV+ +E +S+FAW++KG WE+ +T DEE +R +WFRIGFEPLFVDFT AG+WF Y+L+E A VG +VD SVLQLSLF +TVSFLLLV L+PFAN N MGA + GIDA CMA+LA +A W GT A +VD+ V+++QL+ A+IIP+YVDT +VG+IR ++R + D E +++R YI AW P +CTM+ N+ A +T G P A+ + AARTGPYP
Sbjct: 2178 SSSIRRPSTTMAIVALGQLQFLATLSLVGNTGTEDSKLYDFANNLRWINLWPPASFARSFTPASMYGELDQEGEDAXXXXXXXXXXXXXXXXXEGVENEES---------GDLSSGVFVGNLVLFLIILFIIFLIHITVASGIEAYWLAKRGAEKHVARAQRRGVPVRE----------------------LSARLSNPWAPFDPNSE---------------------------SQRSLR------TAKTSG-----------DDEGEAD------------DTDAEEG------------MPETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKIRSKKHIVFIPNADDAVEAESDLYTSVRS-----FGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTLAAIIIPLYVDTAFMMVGSIRDKLRGVREDD------HIDADERKYIRRYIWGAWAPIFCTMIRKNVLAFLKETSAGYSPSVKVSASHVRALSTTTAARTGPYP 2745
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 363 bits (932), Expect = 1.140e-97 Identity = 186/369 (50.41%), Postives = 251/369 (68.02%), Query Frame = 2
Query: 4685 SRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVE---GGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGPYP 5782
+RL PVA CR+HS SAWLHFPHVELV LFFAFEGAVAS SA+R C + A A++LYP++MF+ + RT++VRVRP+ L++F + D D GG+ S+ K+S E++SLF+WADKG WET +T D + RE +WFRIGFEP+FVD+TK G WF+ SLVEWAA VG +++ SV+QL LFCGLH+V F +L+FL+PFANS N + AC+ IDA+ M + A SA WW+GT A ++T+V++LQL++ AL+IPVY+D + ++GAIR+R+RK A T+ ++ ++R Y RR W TWCTML +N+FACA DT +GVR PR + AAR +GPYP
Sbjct: 1377 NRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAEDGTNGDAPSRAGGL--------LSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLDAVTIVMGAIRNRIRK-ALGKTGHELTDEEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKPRFTTAAR----------SGPYP 1726
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 364 bits (935), Expect = 3.340e-97 Identity = 188/366 (51.37%), Postives = 248/366 (67.76%), Query Frame = 2
Query: 4685 SRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGPYP 5782
+RL PVA CR+HS SAWLHFPHVELV LFFAFEGAVAS SA+R C + A A++LYP++MF +VRT+ VRVRPD L++F +D D + G + F S+ K+S E++SLF+WADKG WET +T + RE +WFRIGFEP+FVD+TK G WF+ SLVEWA++ VG ++D S +QL LFCGL + FL+LV L+PFANS N +GAC+V IDAVC LLA +A W+GT A V++AV +LQ+V+ CAL+IPVY+D + ++GAIR R+RK+ + E+ + + ++R + RR W TWC ML +N+FACA DTRDGVR P AAR +GPYP
Sbjct: 1599 NRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTNGNTPNG-----RGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRKRIRKALGKTGQQLTGESPEARD-YIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKPHLLTAAR----------SGPYP 1948
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 353 bits (907), Expect = 6.340e-94 Identity = 187/367 (50.95%), Postives = 247/367 (67.30%), Query Frame = 2
Query: 4685 SRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEER-FVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGPYP 5782
++L PVA CR+HS SAWLHFPHVELV LFFAFEGAVAS SA+R C + A A++LYP++MF +VRT+ VRVRPD L++F +D D G + + F S K+S E++SLF+WADKG WET +T + RE +WFRIGFEP+FVD+TK G WF+ SLVEWA++ VG ++D S +QL LFCGL + FL+LV L+PFANS N +GAC+V IDAV LLA +A W+GT A V++AV +LQ+V+ CAL+IPVY+D + ++GAIR+R+RK A + + + E R ++R + RR W TWC ML +N+FACA DTR+GVR P AAR +GPYP
Sbjct: 1558 NQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTYDEDGTN-----GNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLDAVTIVMGAIRNRIRK-ALGKTGQQQLKGESPEARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKPHLLTAAR----------SGPYP 1908
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 311 bits (798), Expect = 1.040e-86 Identity = 171/377 (45.36%), Postives = 230/377 (61.01%), Query Frame = 2
Query: 4664 RVSAHVGSRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPS----FFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGPYP 5782
RV +RL PVA CR+HS SAWLHFPHVELV FFAFEGAVAS SA+R C + A A++L P++MF+ + RT++VRVRP+ L++F + EGG S PS F S+ K+S E++SLF+WADK WETA+T D + RE +W RIGFEP+FV++TK G WF+ SLVEW AL VG +V+ S++QL LFCGL +V FL+L+FL+PFANS N + AC+ IDA+ M + A SA WW+GT A ++T+V++LQL++ + ++ ++R Y RR W TWCT+LG+N+FACA DT +GVR PR + AAR +GPYP
Sbjct: 390 RVPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTY--------AEGGTS-GDAPSRAGGFLSRFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLF-----------------------------------DEEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKPRFTTAAR----------SGPYP 712
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 310 bits (793), Expect = 2.430e-86 Identity = 164/367 (44.69%), Postives = 237/367 (64.58%), Query Frame = 2
Query: 4682 GSRLIPVAECRKHSRSAWLHFPHVELVVLFFAFEGAVASQVSALREGGCSPVMTVAAVALLLYPVVMFIAIVRTIVVRVRPDSLVVFTPHDSDNAGEDVEGGVSSASKPSFFSKVKASCREDHSLFAWADKGTWETAETADEETRREAEWFRIGFEPLFVDFTKAGAWFVAYSLVEWAALGCVGALVDESVLQLSLFCGLHTVSFLLLVFLQPFANSAANAMGACLVGIDAVCMALLAFSASWWDGTPAAGRVDTAVMLLQLVAFCALIIPVYVDTLLGLVGAIRSRMRKSATNSPPASRTEADKLEERFVRHYIRRAWIPTWCTMLGNNIFACASDTRDGVRPPRSSRAARDEQM*GPAARTGPYP 5782
G+ + V++CR+ S+S WLH+PH+EL+ LFFAFEGAV SQ++ALR S ++ A L+LYP++M + + RT V V+PD+L+VF +++ A A KPS S+ + + D SLF+WADKG WET +TA+++ RR+A+WFRIGFEPLF DFT+AG+WF+ Y+L+E A L + LVD S +Q LFC +H+++F+LLV +PFANS NA+ A ++ DAVCM +LA +A ++GT A R+DTAVM++Q + L+IP+YVDT + + G IR+R S EAD+ E + R W W M+ +N+FAC DTR+G+R P S AR ++ R GP+P
Sbjct: 347 GNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEEA---------LAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGMIRNRK-----GSVDERENEADRAEREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGPTHS--ARQGRL--RTGRIGPFP 695 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig161.67.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig161.67.10 >prot_P-littoralis_Contig161.67.10 ID=prot_P-littoralis_Contig161.67.10|Name=mRNA_P-littoralis_Contig161.67.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1818bp MVLPVLPMRWTAAVPVDCTLVLLAIFAGALVTGRVGAGSSGLSVEVGGGEback to top mRNA from alignment at P-littoralis_Contig161:215799..266716- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig161.67.10 ID=mRNA_P-littoralis_Contig161.67.10|Name=mRNA_P-littoralis_Contig161.67.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=50918bp|location=Sequence derived from alignment at P-littoralis_Contig161:215799..266716- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig161:215799..266716- >mRNA_P-littoralis_Contig161.67.10 ID=mRNA_P-littoralis_Contig161.67.10|Name=mRNA_P-littoralis_Contig161.67.10|organism=Pylaiella littoralis U1_48|type=CDS|length=5454bp|location=Sequence derived from alignment at P-littoralis_Contig161:215799..266716- (Pylaiella littoralis U1_48)back to top |