mRNA_P-littoralis_Contig161.56.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig161.56.2
Unique NamemRNA_P-littoralis_Contig161.56.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: D8LN91_ECTSI (Choline/ethanolamine kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN91_ECTSI)

HSP 1 Score: 511 bits (1316), Expect = 4.810e-173
Identity = 265/370 (71.62%), Postives = 301/370 (81.35%), Query Frame = 2
Query:  290 AIPLLRLGLGSLPEAGGALSEGIRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGGVHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADYRALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPG 1399
            A+PL+RL LGSLPEAG +LSE ++LAALRALRATTPGWRD+ENDH+RR+E+ +GFSM+ALTGGMTN VFRCSKP GENQTVLLRSYGKGTEMFFSR AELRAFK LAERG GP LLATL DGRVEQFLEGR+L A DMR P IS L+ARRMSELH LDI  G R PV+F AL+ FH KAL+LCG VHGGVDVVELG LAT LRERLES  V  +VVFCHNDLQ+  GNI+YN  S+  +      + PT    +P P+      VSLID+EY+GYNPRGFD+GNHFCEWMADY   EPHVL+LERYPS +ERRAF R+YLGA NGV  ++V+ADEVE LV EADAYSLASHLLWAMWALLQ+K+  +  G
Sbjct:   10 AMPLVRLDLGSLPEAGASLSEHVKLAALRALRATTPGWRDSENDHERREEMASGFSMRALTGGMTNTVFRCSKPGGENQTVLLRSYGKGTEMFFSREAELRAFKLLAERGFGPDLLATLGDGRVEQFLEGRSLGAMDMRKPAISTLIARRMSELHALDIDVGSRTPVIFGALESFHAKALQLCGDVHGGVDVVELGGLATLLRERLESR-VPSKVVFCHNDLQS--GNILYNDKSSASAKIPPKLSGPTE---SPRPV------VSLIDYEYAGYNPRGFDVGNHFCEWMADYSTAEPHVLDLERYPSPQERRAFSRAYLGAMNGVPHEEVNADEVENLVKEADAYSLASHLLWAMWALLQSKARESSKG 367          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A836CHX7_9STRA (Choline/ethanolamine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX7_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.910e-73
Identity = 177/439 (40.32%), Postives = 218/439 (49.66%), Query Frame = 2
Query:  305 RLGLGSLPEAGGALSEGIRLAALRALRATTPGW-------------------------RDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGT--EMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGGVHGGVD--------VVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADYRALEPHVLNLERYPSLEERRAFCRSYLGATNGVAD-------DDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYRRFSERFLPPLASSAEAA 1495
            RL LG L +  G L E +R AALR L A   GW                         + T          +  F M  LTGGM+N VF+C K    N  VLLR YG G   + F  R AE+ AF+ LA+ G+GP LL    +GRVE+FLE   L    MR P +S  +AR+++ LH L     D AP ++R L+ +H  A    GG  GGV         +  LGE    L  RL  A      VF HNDLQ   GN+M+    AEG  E A+  S  G              + LID+EYS Y PRGFDLGNHFCEW ADYR   PH L+  R+PS  ++RAFC +YLGA  G A+       DD +   V ALV EA  Y+LASHLLWA W L Q +   +   FDY+ YA  R+ AY  FS  +  P      AA
Sbjct:   18 RLDLGKL-DVHGELPESLRTAALRILAACVDGWQCFRDCSTCSPSSKGSSGNSTTFSVKGTSPGCPASPVSLCKFHMHTLTGGMSNVVFKCEKGGAVNSKVLLRCYGGGGGGDAFLDRKAEMAAFRYLAQAGLGPRLLGEFANGRVEEFLEAETLTPVQMREPRMSAAIARKVAALHALRPPGLDAAPQLWRTLRRWHALAR---GGSGGGVPHAADAFDGMARLGECVEELERRL--AATPSPTVFAHNDLQY--GNLMF----AEGGEEDASGGSGGG-------------TLYLIDYEYSCYAPRGFDLGNHFCEWCADYRGAAPHALDWARFPSDAQQRAFCAAYLGAAAGAAEGARGGGGDDAA---VRALVHEAREYALASHLLWACWGLAQAR--VSEIAFDYVGYAHGRLDAYLHFSRVWPAPEGVRVAAA 426          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A836CQ97_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ97_9STRA)

HSP 1 Score: 236 bits (602), Expect = 5.830e-68
Identity = 140/311 (45.02%), Postives = 181/311 (58.20%), Query Frame = 2
Query:  458 MQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKA---LELCGGVHGGVDVV-ELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADYRALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTK 1378
            M+ALTGGM+NAVF C K +G    VLLR YG  +  FF R AEL AFK LA  G+GP LL    +GR+E+FL+ + L  + MR P +S  +AR+++ +H L     D AP + R L+ +H  A    +L     G VDV+ +L      LR RL  A      VFCHNDLQ   GN+MY  +   GS          G     S        + LID+EY+ YNPRGFD+GNHFCEW ADYR   PH L+  R+PS  +RRAFC +YLG ++G A    +A  V+AL+ EA  Y+LASH+LWA W L Q +
Sbjct:    1 MRALTGGMSNAVFCCEKGAGRR--VLLRCYGLNSNAFFDRSAELLAFKYLARNGLGPQLLGEFANGRIEEFLDAQTLTPELMRAPRMSAQIARQVAAMHALRPAGLDTAPQLLRTLQRWHAMARAGAQLPRSSSGDVDVIAQLDACVAELRARL--AATPSPTVFCHNDLQY--GNVMYTCAEDGGS----------GGSDXXS------GGLYLIDYEYASYNPRGFDVGNHFCEWCADYRGAAPHALDAARFPSDAQRRAFCAAYLGESDGAA----AAPRVDALMREAQEYALASHVLWACWGLAQAR 285          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A2D4BLE2_PYTIN (Choline/ethanolamine kinase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLE2_PYTIN)

HSP 1 Score: 235 bits (600), Expect = 3.330e-67
Identity = 140/368 (38.04%), Postives = 200/368 (54.35%), Query Frame = 2
Query:  350 EGIRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGG--VHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADY-RALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYR 1444
            + +  + +  L  +TPGW D + D           S+  + G MTN +F+ SKPSGEN  VL+R YG+GTE FFSR  E+R F+ L++  +G  LL    +GRVE F+ G     K+MR P  S  +A +M + H++++   DR+P    A++ F + A E C G      V+  +  E    LR  +E   V   VV CHNDLQ   GNIM                            RT   +V LIDFEYS YNPRG+D+GNHFCEW  DY + + PH+ + +RYP+++E+R FCR+YL   N    + VS DE+E L  EA+ Y++A+HL W++W  +Q         FD++SYA  R  A++
Sbjct:   25 QKLHASIVTTLAQSTPGWVDVKTDD---------ISVYHVGGAMTNLIFKVSKPSGENNDVLVRIYGEGTESFFSRKDEIRLFQMLSKVDMGVGLLGEFRNGRVESFIYGSTFTNKEMRKPEWSSCIAAKMRKFHSVNVDI-DRSPRFLTAIEHFLQVAREKCVGEKFENVVNFDQYDEDLKELRALVEQ--VPSPVVLCHNDLQY--GNIM----------------------------RTDDGVV-LIDFEYSAYNPRGYDIGNHFCEWTYDYHKTINPHLGDFKRYPTVDEQRHFCRAYLAGENK---EPVSEDEIEXLRLEANTYAMATHLFWSLWGFIQASQSEID--FDFISYATCRYDAFK 344          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A1V9YRV7_9STRA (Choline/ethanolamine kinase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YRV7_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.050e-64
Identity = 131/355 (36.90%), Postives = 186/355 (52.39%), Query Frame = 2
Query:  377 ALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGGVHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADYRALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAY 1441
            AL++T PGW +T +             ++ L+G MTN +F CSKP+  N+ VLLR YG GT+ FF R  E+  F+ L+    G  LL   ++GRVE  ++GR   A D+RNP +S  +A +  + H + +   DR P +   + +    A   C   +  VD        +TL   L +  V   +VFCHNDLQ   GNIM +S + +                           V  IDFEYS YNPRG+DLGNHF EW  DY    P   +  +YPS+EE+RAFCR+YL A     D +++ + VE+L  EA+AY+LA+HL W++W  +Q    +    FD+ SYA  R  A+
Sbjct:   48 ALKSTVPGWENTPSSQ---------VKVEHLSGAMTNVIFTCSKPTPINEKVLLRVYGSGTDAFFCRNEEMAVFQELSRNQFGVRLLGEFDNGRVESMIDGRTCTAADIRNPILSQKIAIKFRQFHNVHVDI-DRNPRILNNINKLFNDAKHKCAKANISVDFTAFANDISTLTNLLRT--VPSPIVFCHNDLQY--GNIMLSSKTND---------------------------VVFIDFEYSHYNPRGYDLGNHFSEWCYDYHGETPEFGDFTKYPSVEEQRAFCRAYLSA-----DGNINDEAVESLCREANAYALATHLFWSLWGFIQATQSSIE--FDFYSYATCRWGAF 354          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A067CRM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CRM3_SAPPC)

HSP 1 Score: 225 bits (573), Expect = 2.740e-63
Identity = 138/367 (37.60%), Postives = 191/367 (52.04%), Query Frame = 2
Query:  347 SEGIRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRAL-KEFHEKALELCGGVHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADYRALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYR 1444
            +EG+R     AL  T  GW +   D           ++  L+G MTN +F C KPS  N+ VLLR YG GT+ FFSRG E   F+ L+ER +G  LL   ++GRVE  ++G    A D+R+P IS  +AR+    H +++   DR P + + + K F +   ++       VD     E   TL   L  A V   +VFCHNDLQ   GNIM +S + +                           V  IDFEYS YNPRG+DLGNHF EW  +Y    PH+ +   YPS++E+RAFCR+YL A     D   +A +VEAL  EA+ Y+LA+HL W++W  +Q         FD+ +YA  R  A++
Sbjct:   27 NEGLRRQVAGALSTTVAGWANVALDD---------ITITHLSGAMTNVIFACEKPSSPNKKVLLRVYGPGTDAFFSRGEETLVFQQLSEREMGVGLLGEFDNGRVETMIDGATCTAADIRDPLISTKIARKFRAFHDVNVDI-DRHPRILKNIHKLFRDAKSKVAAATSISVDFDAFAEDIGTLETML--AAVPSPIVFCHNDLQY--GNIMLSSKTDD---------------------------VVFIDFEYSHYNPRGYDLGNHFSEWCYNYHGETPHLGDFGAYPSVDEQRAFCRAYLEA-----DGAPTAADVEALRTEANTYALATHLFWSLWGFIQATQSTID--FDFEAYAKCRWAAFQ 345          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A8K1CRG5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRG5_PYTOL)

HSP 1 Score: 225 bits (573), Expect = 2.740e-63
Identity = 137/373 (36.73%), Postives = 197/373 (52.82%), Query Frame = 2
Query:  350 EGIRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGGVHGGVD-----VVELGELATTLRE-RLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADY-RALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYRR 1447
            + +  + +  L A TPGW D + D           ++  L G MTN +F+ SKPSG N  VL+R YG+GT+ FFSR  E+R F+ L++  +G +LL    +GRVE+ ++G    AK+MR P +S ++AR+M   H LD+    + P     ++   + A   C      VD     VV+       +++   E   V   +V  HNDLQ   GNIM                            RT   +V LIDFEYS YNPRG+DLGNHFCEW  DY + + PH+ +  RYP++EE+R+FCR+YL    G   + V+A++VE L  EA+ YS ASHL WA+W  +Q         FD+L+Y   R  A+++
Sbjct:   28 QKLHASIVTTLAACTPGWVDVKTDD---------VNVDHLGGAMTNLIFKVSKPSGVNAEVLVRIYGEGTDSFFSRAEEMRLFQLLSKFDIGISLLGEFSNGRVEKLIQGDTFTAKEMRKPELSSIIARKMRIFHDLDVDI-PKTPKYLNEIRRLLDVARAKC------VDPKFESVVDFAVFEQDVKDLEAECELVPSPLVLSHNDLQY--GNIM----------------------------RTEAGVV-LIDFEYSSYNPRGYDLGNHFCEWAYDYHKTINPHLGDFTRYPTVEEQRSFCRAYL---TGETKETVTAEDVEQLRLEANTYSQASHLFWALWGFIQASQSEID--FDFLAYGKCRYDAFKK 348          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: K3WNK0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNK0_GLOUD)

HSP 1 Score: 221 bits (562), Expect = 1.030e-61
Identity = 139/382 (36.39%), Postives = 196/382 (51.31%), Query Frame = 2
Query:  317 GSLPEAGGALS---EGIRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGGVH--GGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADY-RALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYR 1444
            G    A GAL    + +  + ++ L   TPGW+D + D            ++ L+G MTN +   SKPSGEN  +L+R YG+GT+ FF R  E R F+ L+ + +G  LL    +GRVE+ ++G  L +K MR P +   +AR+M   H +DI   D  P     +    E A + C G    G VD  E  +    L   L+   V   VV  HNDLQ   GNIM                            +T   +V LIDFEY+ YNPRG+DLGNHFCEW  DY + + PH+ +  +YP+ E++R FCR+YL   +G  D   + ++VE L  EA++YSLASHL W +W  +Q         FD+L+YA  R  A++
Sbjct:   12 GPFLAAAGALEKEKQKLHASLVKTLAECTPGWKDVKPDD---------IDVKHLSGAMTNLILSVSKPSGENADLLIRIYGEGTDSFFVRSEETRLFQLLSSKNIGIELLGQFSNGRVERLIDGTTLTSKQMRQPEVLKAIARKMRVFHHIDIDI-DHTPRYMSEIHRLLEIARKKCTGPRFDGIVDFDEFVKDVKELEHILDQ--VPSPVVLSHNDLQY--GNIM----------------------------KTDNDVV-LIDFEYTSYNPRGYDLGNHFCEWAYDYHKTINPHLGDFSKYPTAEQQREFCRAYLSGEHG--DVAYTEEDVEVLRKEANSYSLASHLFWGLWGFIQAVQSEID--FDFLAYAKCRYDAFK 346          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A662YGB9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YGB9_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.600e-61
Identity = 137/367 (37.33%), Postives = 189/367 (51.50%), Query Frame = 2
Query:  356 IRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELCGG--VHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADY-RALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADE-VEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYR 1444
            ++ + +  L   TPGW D   D            ++ L G MTN +F   KP GEN  VL+R YG+GTE FFSR  E R F+ L+E+ +G  LL    +GR E+ + G    +K MR+P  S  +A++M   H LDI   DR P    +++   E A   C G      +D+ +L +    L + L  A V   +V  HNDLQ   GNIM +   A                            V LIDFEY+ YNPRG+DLGNHFCEW  DY + + PH+ +  +YPS++++RAFC +YL  T+G  D+    DE +E L  EA+ YSLASHL W +W  +Q         FD+L+Y   R  AY+
Sbjct:   30 LQASIVATLTQCTPGWADVAPD---------SVDVEHLGGAMTNLIFAVHKPEGENPDVLVRVYGEGTESFFSRVEETRLFQLLSEQKIGVQLLGQFANGRAEKLIHGSTYSSKKMRSPEESPRIAKQMRVFHGLDIEI-DRTPTYLSSVRNLLEVARTKCTGEKFKAVLDLEQLAQDVDDLEQTL--ATVPSPIVLSHNDLQY--GNIMKSDCGA----------------------------VVLIDFEYTSYNPRGYDLGNHFCEWAYDYHKTVNPHLGDFTKYPSVQQQRAFCLAYLAGTDG--DEAAVRDEDIETLRLEANTYSLASHLFWGLWGYIQAAQSTID--FDFLAYGKCRYDAYK 350          
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Match: A0A484E547_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E547_BRELC)

HSP 1 Score: 218 bits (554), Expect = 1.310e-60
Identity = 138/366 (37.70%), Postives = 187/366 (51.09%), Query Frame = 2
Query:  356 IRLAALRALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGENQTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFLEGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEKALELC--GGVHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGNIMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPRGFDLGNHFCEWMADY-RALEPHVLNLERYPSLEERRAFCRSYLGATNGVADDDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAAERVRAYR 1444
            + ++ + ALR   P W D E D            ++ L G MTN +F   KP G++  VL+R YG+GTE FFSR  E R F+ L+++ +G  LL    +GRVE+ ++G    +K MR P  S  +A+++   H LDI   DR P     +++    A   C      G VD  +L E    L   +  A V   +V  HNDLQ   GNIM N                TGD               LIDFEY+ YNPRG+DLGNHFCEW  DY + + PH+ +  +YP+ E++R FCR+YL   +G  + +VS  EVE L  EA+ YSLASHL W +W  +Q         FDYL YA  R  A +
Sbjct:   23 LHVSVVSALRKCVPSWSDVEPD---------SVDVEHLGGAMTNLIFAVHKPEGQHCDVLVRVYGEGTESFFSREEETRLFQLLSDKHIGVELLGQFSNGRVEKLIQGTTYTSKRMRLPHESRCIAKQLRIFHELDIDI-DRRPTYITGIRKLLHVARVKCTSDAFKGVVDFDQLAEDVDGLERII--AKVPSPLVLSHNDLQY--GNIMKND---------------TGD-------------AVLIDFEYTSYNPRGYDLGNHFCEWAYDYHKTVNPHLGDFTKYPTHEQQREFCRAYLAGKDGD-EKEVSESEVETLCHEANTYSLASHLYWTIWGFIQASQSTID--FDYLGYAQGRYAALK 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig161.56.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN91_ECTSI4.810e-17371.62Choline/ethanolamine kinase n=2 Tax=Ectocarpus Tax... [more]
A0A836CHX7_9STRA3.910e-7340.32Choline/ethanolamine kinase n=1 Tax=Tribonema minu... [more]
A0A836CQ97_9STRA5.830e-6845.02Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A2D4BLE2_PYTIN3.330e-6738.04Choline/ethanolamine kinase, putative n=1 Tax=Pyth... [more]
A0A1V9YRV7_9STRA3.050e-6436.90Choline/ethanolamine kinase (Fragment) n=1 Tax=Thr... [more]
A0A067CRM3_SAPPC2.740e-6337.60Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8K1CRG5_PYTOL2.740e-6336.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WNK0_GLOUD1.030e-6136.39Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662YGB9_9STRA1.600e-6137.33Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A484E547_BRELC1.310e-6037.70Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig161contigP-littoralis_Contig161:173412..183958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LN91
Preferred nameCHKA
PFAMsCholine_kin_N,Choline_kinase
Model size2298
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00866,ko:K00894,ko:K14156
KEGG ReactionR01021,R01468
KEGG Pathwayko00564,ko01100,ko05231,map00564,map01100,map05231
KEGG ModuleM00090,M00092
Hectar predicted targeting categorysignal peptide
GOsGO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004103,GO:0004104,GO:0004305,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005938,GO:0006066,GO:0006576,GO:0006580,GO:0006629,GO:0006644,GO:0006646,GO:0006650,GO:0006656,GO:0006657,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006869,GO:0007275,GO:0007517,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009308,GO:0009636,GO:0009987,GO:0010033,GO:0010876,GO:0014070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0017076,GO:0019637,GO:0019695,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0033265,GO:0034308,GO:0034641,GO:0035639,GO:0036094,GO:0042133,GO:0042165,GO:0042221,GO:0042439,GO:0042493,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046337,GO:0046470,GO:0046474,GO:0046486,GO:0046983,GO:0048513,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0052689,GO:0061061,GO:0065007,GO:0065008,GO:0070405,GO:0071702,GO:0071704,GO:0071944,GO:0090407,GO:0097159,GO:0097164,GO:0097367,GO:0099568,GO:1901160,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1903165,GO:1904681
Exons9
Evalue1.02e-178
EggNOG OGsCOG0510@1|root,KOG2686@2759|Eukaryota
Ec32 ortholog descriptioncholine/ethanolamine kinase
Ec32 orthologEc-16_004110.1
EC2.7.1.32,2.7.1.82
Descriptioncholine kinase activity
Cds size1287
COG categoryM
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig161.56.2prot_P-littoralis_Contig161.56.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig161 174200..183735 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789777.820028-UTR-P-littoralis_Contig161:173411..1741991680789777.820028-UTR-P-littoralis_Contig161:173411..174199Pylaiella littoralis U1_48UTRP-littoralis_Contig161 173412..174199 -
1680789777.956145-UTR-P-littoralis_Contig161:183735..1839581680789777.956145-UTR-P-littoralis_Contig161:183735..183958Pylaiella littoralis U1_48UTRP-littoralis_Contig161 183736..183958 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789777.839066-CDS-P-littoralis_Contig161:174199..1743311680789777.839066-CDS-P-littoralis_Contig161:174199..174331Pylaiella littoralis U1_48CDSP-littoralis_Contig161 174200..174331 -
1680789777.850395-CDS-P-littoralis_Contig161:174757..1748711680789777.850395-CDS-P-littoralis_Contig161:174757..174871Pylaiella littoralis U1_48CDSP-littoralis_Contig161 174758..174871 -
1680789777.8621476-CDS-P-littoralis_Contig161:175266..1755641680789777.8621476-CDS-P-littoralis_Contig161:175266..175564Pylaiella littoralis U1_48CDSP-littoralis_Contig161 175267..175564 -
1680789777.877582-CDS-P-littoralis_Contig161:176257..1764151680789777.877582-CDS-P-littoralis_Contig161:176257..176415Pylaiella littoralis U1_48CDSP-littoralis_Contig161 176258..176415 -
1680789777.8880334-CDS-P-littoralis_Contig161:178090..1781631680789777.8880334-CDS-P-littoralis_Contig161:178090..178163Pylaiella littoralis U1_48CDSP-littoralis_Contig161 178091..178163 -
1680789777.8998818-CDS-P-littoralis_Contig161:178525..1785781680789777.8998818-CDS-P-littoralis_Contig161:178525..178578Pylaiella littoralis U1_48CDSP-littoralis_Contig161 178526..178578 -
1680789777.9141037-CDS-P-littoralis_Contig161:179427..1795471680789777.9141037-CDS-P-littoralis_Contig161:179427..179547Pylaiella littoralis U1_48CDSP-littoralis_Contig161 179428..179547 -
1680789777.9273157-CDS-P-littoralis_Contig161:179830..1800171680789777.9273157-CDS-P-littoralis_Contig161:179830..180017Pylaiella littoralis U1_48CDSP-littoralis_Contig161 179831..180017 -
1680789777.9383984-CDS-P-littoralis_Contig161:183583..1837351680789777.9383984-CDS-P-littoralis_Contig161:183583..183735Pylaiella littoralis U1_48CDSP-littoralis_Contig161 183584..183735 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig161.56.2

>prot_P-littoralis_Contig161.56.2 ID=prot_P-littoralis_Contig161.56.2|Name=mRNA_P-littoralis_Contig161.56.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=429bp
MTSTTTAAAGAVAAAAASAGVGAIPLLRLGLGSLPEAGGALSEGIRLAAL
RALRATTPGWRDTENDHKRRQELIAGFSMQALTGGMTNAVFRCSKPSGEN
QTVLLRSYGKGTEMFFSRGAELRAFKALAERGVGPALLATLEDGRVEQFL
EGRALEAKDMRNPTISVLVARRMSELHTLDIGAGDRAPVVFRALKEFHEK
ALELCGGVHGGVDVVELGELATTLRERLESAFVSDEVVFCHNDLQASTGN
IMYNSSSAEGSPETAATTSPTGDETNPSPIRTSPSIVSLIDFEYSGYNPR
GFDLGNHFCEWMADYRALEPHVLNLERYPSLEERRAFCRSYLGATNGVAD
DDVSADEVEALVAEADAYSLASHLLWAMWALLQTKSGAAPPGFDYLSYAA
ERVRAYRRFSERFLPPLASSAEAAEQAE*
back to top

mRNA from alignment at P-littoralis_Contig161:173412..183958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig161.56.2 ID=mRNA_P-littoralis_Contig161.56.2|Name=mRNA_P-littoralis_Contig161.56.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10547bp|location=Sequence derived from alignment at P-littoralis_Contig161:173412..183958- (Pylaiella littoralis U1_48)
GTTTTTTCCCCTCCCTCTGACCTCGACTCTAGTTGTGTCTTTGGGTCTTG ACCCGCCGGGCGTTTCCACGAATTTCATCCCGGACGCCCTGTACTACTGC TGCTGCTGCTATTGTTGTTGTAGCAGGGTAATGCCCGCGAGACCGTAGCA GTGGAAATTTGACGAGTGCGGTGTGTAGGAGGTGATCCCTAATTGACGCC TGTTACGACTGAGAACAGAACGAATGACATCAACTACAACAGCAGCAGCC GGGGCCGTCGCGGCAGCCGCAGCTTCAGCTGGAGTAGGCGCGATTCCGCT GCTACGCCTTGGTTTAGGCAGCTTGCCGGAGGCGGGGGGTGCACTATCGG AAGGAATAAGGCTGGCGGCCTTAAGGCAAGTGTGCCGACCACGAGTCGGG AAGGCATGACGTAAGTGTGGGGGTCAAACAGGCACTGGTGTACCTATCAT GATGGCGCATTGTAGTAAAGTAATACTCGGAGTACTTCGAAGTACGAAGT AATCATGTACAAGATGAAGTTATCCTGCTGCGTATGCAAATGTAGCTTTC ACGCGTACGTGCGACGGTTCGGCACCCGTTTACAAGACTGACATGCACCA ACTGCTGTGTGCAATTTATGACACAGCAGCACAGCTGTGTTCTAAATTGA ACAACACATGAGGGTGGGGCCTACGTAATTTTTGTGGACTCGAACATCGA ACATCGAACAAGCGGATAGTTCGATGTTCGACTTTTTGGGTCCTTTGTAA TTTCCGAAAAGGCAAGTAAAAATATCCCACACGCACACACACACGCACAC GCAAGTGCTCCCCAATAGACCGGGCTGTCATATCGGTACGCAGCTACTGC TGCTGCTGCTACTGCTGCTGTGTGGTTGCGACAGGAAGCCACGCCCGTGT GATTGCGTTTCACCTGGCCCCGCTTGCGCACGCGGGACCCGGGAACAGGC GAAACCTCGCTTTCGCCCGGCATAGACACTTGTTTTGCGCCTATGCTCTG CGGTCGTCTCTCTCTCTCGGTCGCCCGGTCGCCCTCTCTCTCTTGTCGTG ATGTTAGAGGGAGCGATAGACGCGGGTCTTCTTTTTTTTGTCACCAATTT CTTTCGTCAATGGCCCACAGGACTGTGGTTTCGGTGTTAGGTTTTCGAGT TTTTGTCAAAGATGTTAGAGTTTTAGGGGGGAATCGCCCCTGGAAGATCC GGCGTAGAAAAACTCGAACACCCTCACATCTTTTGTTTTATTTATTTTCA CGGCCAATCACATGATTACGCCGCCTGTTCGATGTTCGATGTTCGAGTCC AAAAAAATTACGTAGGCCCCACCCTAACCCACCTTCTCTGTTCTTTGTAA AAAAAGGCAGATCGCGGAAGATACCACAGCCCGTGCACCCGGGTATCATA ACTCCACATACCAGCAAAAATAATTTTCGGTGCCGAAAGCAGTTTCAATG TGAATGCGTAATTTTATGGACTCGAACATCGAACATCGAACAGGCGGCGT AATCATGTGATTGGCCGTGAAAATAAAATAAAACAAAAGATGTGAGGGTG TGCGAGCAGGGTGGGGCCTACGTAATTTTCTTGGACTCGAACATCGAACA TCGAACATCGAACATCGAACAGGCGGCGTAATCATGTGATTGGCCGTGAA AATAAAATAAAACAAAAGATGTGAGGGTGTGCGAGCAGGGTGGGGCCTAC GTAATTTTTTTGGACTCGAACATCGAACATCGAACAGGCGGCGTAATCAT GTGATTGGCCGTGAAAATAAAATAAAACAAAATATGTGAGGGTGTTCGAG TTTTTCTACGCCGGATCTTCCAGGGGCGATTCCGCCTAAAACTCTAACAT CTTTCACAAAAACTCGAAAACCTAACATCGAACCTACAGTCCCGTGGGCT CTTGACGAAATAAATTAATTGGTGACAAAAAAAGAAGACCCGCGTCTATC GCTCCCTCTCAGGACAAGAGAGAGAGGGCGACCGGGCGACCGAGAGAGAG AGGCGACCGCAGAGCATAGGCGCAAAACAAGTGTCTATGCCGGGCGACAG CGAGGTTTCGACTGTTCCCGGGGCCCGCGTGCGCAAGCGGGGCCAGGTGA GACGCAATCACACGGGCGTGGCTTCCTGTCGCAACCACACAGCAGCCGTA GCAGCAGCAGCAGCAGCTGCGTACCGATATATATGACAGCCCGGTCTATT GGGGAGCACTTGCGTATGTGTGTGTGTGCCTGTGGGATATTTTTACTCGC CTTTTCCGAAATTACAAAGGACCCAAAAAGTCGAACATCGAACTATCCGC TTGTTCGATGTTCGATGTTCGAGTCGACAAAAATTACGTAGGCCCCACCC TGAAGCAGCAGTGCGTGACACGTCCAAGTCACGTAGGATACCACACGGAG TCCCCTGGACATAGTTTCATCTTTTTCAAGTGCTCGTATCATATGTACTA CTCCGTACTATTGTTTGGCTTATCATGGGACCACCAGGTACACACCTAAT TTATTCGTCCTGTGAGAAGATCGGCGTTGGAAATACTTCGTCGAGAGCTT CCTATTTTCATACCAGTACTCTCATGATGTCGGATACCGTAAACTACGGA GTTTTCCCGCCGGAGGGGGGATCTTTTTTTCGGTTGAAATCAACCCCCCC GGGGGGAAATTGACGTACCGGGGGGGGTTGGTTGTTTTCTTTTTTCCCAT GCTACCCCGGGGGGTGTCTACCCGGGGGGGCTGTGCAACGAATGGTGGTC CACACACACACACACACAGCAGTTGCCGACCGTGATGGATAGGGTTTACG GGCAAGCATACAAGCGGCAGAAGGGCCCGGGAAAGAACAAGAGCACATAA TGTGAAGAGAAAGAAGAGAGCAATAAAAAACCAAGCGCGTAGGTACCCTA GAAACAACCTGGAATGCCAATTGGCCGCGGTACAACACATATCTCGTCGT TGTGAGGTACCAATTATTCGATTAATTTGTGTCCTGCTGTGGAAAAGCGG TCAAGGCAGCCCCGTCTTATCCCACGCTCGGAGAGAGAGAGAGAGAGAAC ACAAAAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGAGTGCGC TGCGACGTGAACACGCAGATATACACATGAAGAGAGCGGAAGAGGGGGGC GGAGGGGGAGTGACGGAGGAAGGGATGGAGAGAGAGGCACGCGAAGAGTG AAACGCGGGTTGAGAGAGACCGAGCAAAATCCTGCTGCAAAAGTAGGTTG ATACCAAGCATATACGGTGTCCAGCACCCGCGTATTACATGTGTCCGGTG GGCGTCGGCAGAGCGACCTTCATCTTCGCGTTTCTCTCGAAGCGGGCATG AGAAGCAACAATCCTCTACTCACTCGAAGATTGATTCTTTGGCGGACAGC AGTATTGAGCCAATCTTGAAGATGCCGAAAACCAGGTTTCCGGAGTAAAA TTGAAACCACGGACGAGGGGTGGCAACCGCCCCCCGCGGTCGATCGAGAG AGTTGAAGAAGAGCTTTGTGAGCAGCCTACAGCAGTTGGGAAATGGCACT GTACGGTAGCATGCGGCCATCCGGGAGAGACAACATCGCGTTTCTTTTTG AATGCATGGCGTAACCCTAGCCCCGTGGGCTGCTTCGTGTACATGCGTGC TCTCGTTCGAGGAAAATCATTCCACCTGTTCTGCTTCGAATGAGTACTGC TGTAGTTCGAGTGAATGAAGTGCGGCGTGCCCCTGAATTTGCGGTGTCTC CCCTGCCCCGTGTGTGTGTGTTCGGACGGATGGGGGTGAGCTCACCTTCT CGCGACCGCACCGCCGGCGCCCCCCCCTCCCCATCCCCCCACCCCCCCAC GAAATGCTTTGCTGCTTACCTGCCCGTGCGGTTTTCGCAAGATGCGCCAA CCAAACCACACGAATAACTCTTTTTTTTTTTTTGGCGACAGAGCTCTGCG GGCGACAACGCCAGGATGGAGAGACACTGAAAACGACCACAAGCGGCGGC AAGAGCTGATCGCCGGGTTCTCCATGCAGGCGCTTACCGGTGGGATGACA AATGCAGTGTTTCGATGCTCCAAGCCCAGTGGCGAGAACCAGACGGTGCT GCTTCGGAGCTATGGCAAGGGAACGGAGGTAAATATGCAGTGTTGGAGGA GCAGGGGGCAAGGGCTTGGGAAAATGGCAGGGACTGCTGTGCTGAATCAT TCCGTTCGACTGACGTGGTACATTCGGAGCATATATTCATCACCAAGGGT TTGTTCAACAGCGTTCTTCAAGCTTGGTCCTTTTTCCTGTATGGTTCGGA TAATTCCTTTTCGTTTTGCCTTGCAGTTTCACATGCTTTCCGTCCGCTGT CTGCCTTGACCCGTTTCGCTCTTCGATTCGTGCGCGCCCTCGGGACCAAC CACCACCGAAGATGTTCTTTAGCAGAGGGGCGGAGCTGAGAGCGTTCAAG GCTTTGGCAGAGCGGGGGGTCGGGCCGGCTCTTCTGGCTACGCTCGAGGA CGGGCGAGTGGAACAGTTCCTCGAAGGAAGGGTGAGCCCGTCAGACAGTG AACTAGCTGGGATTGTGTGTCAAGGTGTAGTAAGGAGCCGGCTGCTGGTG GACAGCATTCCCCTGCAGCGTACTCGTACTTGTATGCGCACGTTTTCGCG TCCGGTCTCTCTCTCTCTCTCTCTCTCTTTGTCTGCTTTCCCCTCGCTGG CCTTATCTTTCTGCCTCTCGTCCTTGCTCTCTGGGTCTTCGTAGGCGTGT CTCCCGCACACCGACAACGGCCAAGAATAGCTCCTCGTTTGCTCTCGACG CGGAAGAGATAATGAAACAGTAGCACTGTGGGGTACAGCAGAAGTACTTC TAGTGGAATCCAGGTTGATCACCACACCTGCATTGCATTCGCAGTCAACG CGGATCGCCGCACCCCACCGGTTTTAGTTCTTGGCTGCATCTTTGTAGGA GGACAAAAAAGAGGAGGGTGGGTGGGATGGATGACTCACAGGACCCCCTT TCGGTTCATGGGATGTGGGGTCGGAGTGAACTTAGGATCGGTAGGCAATG ATAAGACCGTCTGGCCCTTGACCAGTACGCGAACAAGATATTTTGACGTT CGCTAGAAGATTGCAGTTGAAAAACATGCGCCGTGCGTGCTCTGTACACA TCGGGAGTAGAGGACTCTTCGTCTTCCTTCTTTTTATGTCTGGGCCCTGC TGCTGGTGGCGCAGGTGGTGCCGCTGGCAGTGATGCAAATACTGCTGATG TTTCTGCAATCACAACTGCTACTGCTACTGTTGTTTCTACTAAAGCTACT GCTACCCGCACCACCGGTACACAGTCGGCTCGTATCATGCAAACCCAGAA ATATTGTGGTTTCTCTCTTTGTTCGCGCAGGCACTCGAGGCTAAGGACAT GCGAAACCCAACCATATCCGTCCTCGTCGCAAGGTACAAGAAAATCTCCG TTGTGTTCTTCTTGATGTTTTTTTTTTCCAAGCCTTGTTCAGCACACCGT CCGCACCTTCCTTCGTCGACGTCATTCACAATAGCTTTTCTGCTGTGCGA GATTTCCCGCTCAACATGGTTTGAGATAGATTAGATTCGCATGGGGTGCG CCGCCTTCGGTAGTTTTGGGGTACGGCAGCACCGCACTCTTCCATCCCTC TGGTTTAGCTTTTTTCGCGGCCCCTCTCTTCCTCTTCAATCCAGTCGCAC AACTTCCTGCCCCTTCTTCGTTGCTGCGGCCGACTGTACTTTTGACTGGT TCGGCGCTCTGCTGCTCCACTTGCCCCCCTTTCCATATACTGCAGACGAA TGTCTGAGCTCCATACCCTGGACATTGGTGCTGGAGACCGGGCTCCTGTC GTGTTCCGAGCGCTTAAGGTAACGAACGTGACAGCTTTTTTTTTTTCGGC ACGGCTGGCTGCTGAGAAGGATTAATTTTTAATTTTATTTGTTTTTGTCC TTCGCACCATAAAAAGTGAAGACTAGAAAATCCTGGGTTGACCTTCCTCC TCACGTGTGACCTCGGCTGACGCGCCCAACTTGCAGCGAAAGTTGTCGAC TTGAGTCCAAAGTAGATGGGATGACAACACACACACAAACACGGCTGCTG AAGAGCAGTTCATGTGGCTTGTTGCTTCTCCATGCCATAATTACAGGCAG AGCCCGTTCAGTTTGGAAACGGCACAGGTTTTGCTGTGCTTGGACGGCTG TTTGTGAGCGTTCATTCATTTTGTTTTATCACCTTGCTCCTCCATACTGC TGTAGTGCTGTACACTTCGATGTATACTTCCTCTGTCTCATAAGTCTGTG CCGTTATGGGCGTGTAATTGTTTGCGCGTCCATACTGTTTCGATCATCCT ATAGTTAGGTTCGTTCGAAAGATGAAGTCTCAAAGAAGCTGATGCAAAAA AAAAAAGAAAAAAAAAGCCAGTTGTTTCTACTAAAATGAAGTCAAAATAT GCCCATTTTGGCCCATTTTTGAGAATTTTGATTCCGCCAGATTTCTTGGT TTTAGAGCATGAGTCCCAAGTATCTTCGTTTTAGTGTGGAAAACCCAATT GTCTTGGTTTTAGTGTGGCGTCACTATTATATTGATTTTAGTAAGGGGAG ACTCGACATGAATCTACGAGTTAGGGGGGCTAGGTTCAGGGTTAGGGATA ATTGTGGGGGAGATTGCATTGTTTTTTTTTGTGCTCCCGCCCCCCCCCTC CACCTCTGGAAAGGGTCAAATACGGCCATTTTTGGCCTGACTACTTTTTT TTGTTAGCCGCTAGCCCATGCAGGGTAGTGCGCAAGAGAAGAAAAAAAAT GTGTTTCAACCCAAAAAACTCCGAAGATTTCGAAAAAATTATCGCCGAAG ACATCGGACACCATTAACGGGGCGTAAAAACATAACGGCACAGACTTATG AGGCAGAGGAAGTATACAGAAAAGATACGCCTCTTTTTGTTCAAGAGGGA TGATTAGCACGGAATACGGGGGGGGGCACTGCTGAGCGGAAATATGTCAC GATCAAGACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAAACAACA GGAACAACAACAACAACAACAGCAGCAGCAGCAGCACGCGCAACAATGGC TCTATGGTACAAGATACGCATACTCGGCTCAATTCCGCAACGCGCAACAT ACGGATGCCTCGGTAAAGTGGAAGGAGCAGAGTTTGCTGCGTTCTACTGG TGATGATGGCTTTTAAGACTCTCGACTCCGCAGGTCTAGTTCTCGCTTTG CATGCGCACCACTGGGTCTACTTATTTGGCGTCTCCAGTCACACACACAC ATAAAACGAAGTTCGCTCACGCGGGTCGTCGTACTTCGTGCATTCGTGAA CTTGCGCACGGTCTGTTTTTTCTCGAACTCTCGTAAGTTTACCGTTGTTT CTCTCTTCTTAACCTTGAATGGTATGGTAAGCAATATGCGTCGACGTTTA CGTATCAGTTGCACCGCCGTACATATCTTCATCAGTGACCAACGGCAGCA AGTTTTTCATGCGTGTATTCATATGATACAAATTTCTCAACAGGAATTCC ACGAGAAAGCTTTAGAGCTCTGCGGAGGCGTTCACGGGGGGGTGGACGTC GTAGAGCTCGGTGAACTCGCGACGACGCTTCGAGAGCGATTGGAGAGCGC CTTTGTATCAGATGAGGTGGTCTTCTGCCACAACGACTTACAGGCGAGCA CGTGGCAGTTTTCTCCCTCTCTCACTTTCTCGTTCTCTCCTCATGTTCTT GCACCTTCCTGGACTCTGCTGTACAGTATACCACGGCACGAGTCCAGGAT GATGAGCGGCTCTCTATGATAGCTCCTGGCTGTTACGTTTTTGTTTTTTG TTTTGGTGTGTTTCGTTCGCTTGCTCTCGCTCTCACCACACATTTTCGGA TGGTGAAGTCGTTGCGTCTCGCTGTTTTATTTGCTTGCTTGCTCGATTTT TTTTGTTTTGTGTTGTGCTGTGTTGTTGGTCTCCTCAAAATCGGGCACCC AGCTGCAAGCTGGTCTTGTTGTTTGAAAGACGTTTACAGCAATAATATTT GGTGTGCAGTCGGCGTGATTGGTATATTTTGGGGTCAATCGGGGCCGCTT TTCTTCGGGGGCAGCAGGTTAGGTGATGTGCCACATGTTGAGGTCGGGAT TGTTGTGTGAGCGAGCCAAAAACAACAAGACAATGACGGTGTAGACACGT TTGCGATACTGCTCTTACAGCCCCCATTGCTATCTGTGAGAGGCCAACAC ACCTTGGGCTCCCCCCTCGACTAACCCCCAACTTCGAAACCTCTTGATAG CTCTGCTCCTGCGACCAACTCCTCACTCACTCTATCCATTCCGCGCCCCC CCTCCTCCTCCCCCGTACTGCTTGCTCCTTTGCCCATTTCAGAGCGGGAA TATAATGTACAACAGCTCTTCAGCCGAAGGGTCGCCGGAAACCGCCGCCA CGACCTCCCCTACCGGGGACGAAACGAATCCGTCCCCTATTCGTACATCC CCGTCTATCGTATCCCTGATCGACTTCGAGTACTCCGGCTACAATCCCCG GGGTTTCGATCTGGGGAATCATTTTTGCGAGTGGATGGCCGACTACCGCG CCTTGGAGCCCCACGTGTTGAACCTGGAGAGATACCCGTCGCTTGAGGAA CGGAGAGCGTTCTGCAGATCGTACCTCGGAGCAACGAACGGGGTGGGTGC ACACGTTATGTGTTCGTGGGGAGTGCGATACGTGTTGAGTGCACAAATCA TCGGTTTTGATTTCGAGCCTTCCATTACCGAACAAAACTTCATGTACGGC AAGTGGACCGATACCGACCGTACGCTACAGCCGCCCGTAGTCTGAGGAAT CAAGAACTGCCTGACGTAGTTCTCCCGAGTGAGGGCGAGGAGAGGGTTTT ACACAAACATGAAGCGTGATGCCAAGCGCACATGTCTGGCTTATTCCTTT CCCTCCCCCGTCTCTTTCGGAACAGCGGTATCATGCAGCTGCAACAAAGC TGCCGCCTTTGCAAACCGTAATATCCCAAACATTGTCTCATGCGGTGTGT GCGTGTGTGCGGTTGCCTTTAATGGTCGCGGTAGCAGGTGGCCGACGATG ACGTCAGCGCGGATGAAGTAGAAGCGCTCGTCGCGGAGGCAGATGCCTAC TCCCTGGCATCGCACCTTTTGTGGGCGATGTGGGCCCTGCTACAGACGAA GGTATGCATTACACCGGGTACATCCTTTGAAAAAAAAAAATGCTTGTAAA TGAATGAGCCAGCGATGAGGGCGGTCACTCCTTTATGGTACACGCAAAGA CGAACACGCCCCGGTTCCCTCGCGCTGCAAACATGCATGGTTGTTTGCCA CACGAACAGCTGCGTTGCGAGACAACAGTCGGCATCGAGGAATGAAGGCC CACCCCACCTGAAACGGAACTTCGTGTCGAGTTCCTTCACCGATCAGGGA CGGTGTCCATGCACTCCGGTCAATCGAGGAACGAGACACACCGACCTTAT TCTGTCACAGAAATCACAAAAATAAAATACGAGGTATTTGTAGTCATTGC TGACATCTTGTGCCTGGCCTTCTTTTTCATACCCCATACCCTTAACGTGT GCTTCGTGTATGACTGTCCGGCGACAGAGCGGCGCTGCCCCCCCGGGCTT CGACTACCTCAGCTACGCGGCGGAGAGGGTCAGGGCCTACCGACGGTTTT CTGAGCGCTTCTTGCCCCCCCTGGCGTCGTCAGCAGAAGCAGCGGAGCAG GCCGAATAAATCATACAATTAGAGAGATATAGAAATACCCGCAGTGTCCC TGTTGGTTGACAGACACCGGTGCCGCTGATTTCTGATTGGCCGAACTATT GCATATATAAGTTTCGGACAGAGGACCCAGTTTTGCTCGGGCTTTTTGCC CACAGATAAGTAATAAAACGCCTCTACAAATCCGCAAGTGGATACCAGTC GAGTGAGGCAGTGGGATCAAAAATGACCTGTTCTTCTGCAACGCCATCAT CGGCACACGGATATGCCGCTCAGTCAACCCCACGAAAACAATGGAAATAA GAAGGGCCATGAAAAGAAGTGGCGAGAGAGGAAACGTGATGGAGATGTAA GATAAGCATGTGAAAGGTACGGCAGCCGCAGATGGGTGTAGCCAGAGAGC TGGGAATAAAAAAGGGTTTCCTGCTGCTGTGCGTGTGTTTCGCCTGTGGG TTGTCGATGAAGAAATGAGCGCAAGCAGGAGGGTAGGTGCTCTGGGGACC CTTGAGCGACGCAAGGCGCAATACGAAGAGCCGACAGTCAAGTGTGGTCG GCGAAACGGTTAAGAAGGCCAGCTTCCTAGCCCTCTCGCCGGGTGTGAGA CCCTGCGAGAACGCGTCTCGAAGCCATTTTTTGTCGAGAAGGCATCATGT TTTCGCTCGTAAGCCTGCGATAGGCTATAAATGAGGAACGAACCGTGGTA AAACCGTTGAGAGAAAAATAACAAGACGTAGATTCGATCCCTCCAAATTT CGCGACATAAAAAGCCGCATGAAGGTGGCCATAAAAAAATGTGAAGC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig161:173412..183958-

>mRNA_P-littoralis_Contig161.56.2 ID=mRNA_P-littoralis_Contig161.56.2|Name=mRNA_P-littoralis_Contig161.56.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1287bp|location=Sequence derived from alignment at P-littoralis_Contig161:173412..183958- (Pylaiella littoralis U1_48)
ATGACATCAACTACAACAGCAGCAGCCGGGGCCGTCGCGGCAGCCGCAGC
TTCAGCTGGAGTAGGCGCGATTCCGCTGCTACGCCTTGGTTTAGGCAGCT
TGCCGGAGGCGGGGGGTGCACTATCGGAAGGAATAAGGCTGGCGGCCTTA
AGAGCTCTGCGGGCGACAACGCCAGGATGGAGAGACACTGAAAACGACCA
CAAGCGGCGGCAAGAGCTGATCGCCGGGTTCTCCATGCAGGCGCTTACCG
GTGGGATGACAAATGCAGTGTTTCGATGCTCCAAGCCCAGTGGCGAGAAC
CAGACGGTGCTGCTTCGGAGCTATGGCAAGGGAACGGAGATGTTCTTTAG
CAGAGGGGCGGAGCTGAGAGCGTTCAAGGCTTTGGCAGAGCGGGGGGTCG
GGCCGGCTCTTCTGGCTACGCTCGAGGACGGGCGAGTGGAACAGTTCCTC
GAAGGAAGGGCACTCGAGGCTAAGGACATGCGAAACCCAACCATATCCGT
CCTCGTCGCAAGACGAATGTCTGAGCTCCATACCCTGGACATTGGTGCTG
GAGACCGGGCTCCTGTCGTGTTCCGAGCGCTTAAGGAATTCCACGAGAAA
GCTTTAGAGCTCTGCGGAGGCGTTCACGGGGGGGTGGACGTCGTAGAGCT
CGGTGAACTCGCGACGACGCTTCGAGAGCGATTGGAGAGCGCCTTTGTAT
CAGATGAGGTGGTCTTCTGCCACAACGACTTACAGGCGAGCACCGGGAAT
ATAATGTACAACAGCTCTTCAGCCGAAGGGTCGCCGGAAACCGCCGCCAC
GACCTCCCCTACCGGGGACGAAACGAATCCGTCCCCTATTCGTACATCCC
CGTCTATCGTATCCCTGATCGACTTCGAGTACTCCGGCTACAATCCCCGG
GGTTTCGATCTGGGGAATCATTTTTGCGAGTGGATGGCCGACTACCGCGC
CTTGGAGCCCCACGTGTTGAACCTGGAGAGATACCCGTCGCTTGAGGAAC
GGAGAGCGTTCTGCAGATCGTACCTCGGAGCAACGAACGGGGTGGCCGAC
GATGACGTCAGCGCGGATGAAGTAGAAGCGCTCGTCGCGGAGGCAGATGC
CTACTCCCTGGCATCGCACCTTTTGTGGGCGATGTGGGCCCTGCTACAGA
CGAAGAGCGGCGCTGCCCCCCCGGGCTTCGACTACCTCAGCTACGCGGCG
GAGAGGGTCAGGGCCTACCGACGGTTTTCTGAGCGCTTCTTGCCCCCCCT
GGCGTCGTCAGCAGAAGCAGCGGAGCAGGCCGAATAA
back to top