mRNA_P-littoralis_Contig1609.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A7S3LZE3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZE3_9STRA) HSP 1 Score: 154 bits (389), Expect = 9.610e-43 Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 1
Query: 4 QDKKKSKDAEKEAVRLQIQAENSGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKEDHNALRGIAAGYIRTHPEEFCPFLGYELGSTEFEEYCDKVASLTDAEWGGQPRTESTFSSI 405
QDK E +V+ Q++ +NSGPS R+IEL +IN KLA D + VKTIISDGNCLYRAIADQLQ ED+ +LRGIAA YIR H E+F PF+G E S EF+ YCDKVASLTDAEWGGQ ++ +++
Sbjct: 135 QDKXXXXXXELASVKQQLKDDNSGPSAREIELAKINAKLAQDSVAVKTIISDGNCLYRAIADQLQYTGSSHSEDYQSLRGIAAAYIRNHAEDFSPFIGVEAPSPEFDAYCDKVASLTDAEWGGQLEVKALSAAL 268
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A7S4B021_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B021_CHRCT) HSP 1 Score: 93.6 bits (231), Expect = 2.740e-19 Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 70 SGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKEDHNALRGIAAGYIRTHPEEFCPFLGYELGSTEFEEYCDKVASLTDAEWGGQ 375
SGPS R +E +++ KL GL V+ + +DG+CLYR++ADQLQ G D R +AA YIRTHP++F P+L E G+T + YC +V S +EWGGQ
Sbjct: 214 SGPSARAVETERLMAKLEPLGLAVQEVPADGHCLYRSVADQLQ--RSGDAADFQQCRRLAAEYIRTHPDDFMPYLPGEAGATTIDAYCAQVES--SSEWGGQ 311
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A7S1SQK9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SQK9_9CHLO) HSP 1 Score: 86.3 bits (212), Expect = 4.260e-18 Identity = 47/114 (41.23%), Postives = 74/114 (64.91%), Query Frame = 1
Query: 7 DKKKSKDAEKEAVRLQIQAENSGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKEDHNALRGIAAGYIRTHPEEFCPFLGYELG--STEFEEYCDKV 342
DKKK++DAE+EA R+ + E GP+ RD+E +++ L L +K I +DG+C+YRA+ DQL + S K LR +AA ++R+HP+++ PF+ E + EFE+YC +V
Sbjct: 41 DKKKAQDAEREA-RIAAEKEAMGPTDRDVEAAKLDELLKPHQLRIKEIPADGHCMYRALEDQLVMTSEAPKGGFQGLRELAASFMRSHPDDYLPFVVEEREEPAEEFEKYCAEV 153
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: F0W511_9STRA (Uncharacterized protein AlNc14C19G1982 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W511_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.510e-17 Identity = 53/132 (40.15%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 1 IQDKKKSKDAEKEAVRLQIQAENSGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKE-DHNALRGIAAGYIRTHPEEFCPFLGYELG------STEFEEYCDKVASLTDAEWGGQ 375
++D+KK++ EKE +A S+RDIE++QI KL L ++ I SDGNCLY+A++DQL + K + LR +A+ YIRTH ++F PFL ++ S +FEEYC + + +EWGGQ
Sbjct: 96 MRDRKKNQ--EKERRERIDEANKHIVSKRDIEIEQIQRKLIPLNLEIREIPSDGNCLYQALSDQLHQENTALKAISYQELRQLASEYIRTHSDDFLPFLELDVSNSTKSESEQFEEYCKNI--VNSSEWGGQ 223
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A0D2X565_CAPO3 (OTU domain-containing protein 6B n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X565_CAPO3) HSP 1 Score: 85.1 bits (209), Expect = 2.400e-16 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 73 GPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIG-SKEDHNALRGIAAGYIRTHPEEFCPFLGYELGS----TEFEEYCDKVASLTDAEWGGQPRTESTFSSI 405
GPS RD+E Q+ L L +KTI SDG+CLY A+ADQL+ ++ + D ALR + A +I H ++F PFL + G TE ++YC+++AS A WGGQ ++ + +
Sbjct: 164 GPSARDVEANQLKQALQKADLAIKTITSDGHCLYNAVADQLRRNAVARAPTDFAALRKLTASFILAHQDDFLPFLVTDSGDMYTETELKKYCNEIAST--AAWGGQIEAQALSAGL 277
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A176VN84_MARPO (OTU domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VN84_MARPO) HSP 1 Score: 84.7 bits (208), Expect = 3.440e-16 Identity = 56/127 (44.09%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 28 AEKEAVRLQ-IQAE-NSGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKEDHNALRGIAAGYIRTHPEEFCPFLGYELGS---------TEFEEYCDKVASLTDAEWGGQ 375
A++EA R Q IQ E N+ S R +E QQ+ GKLA G +K I SDG+CLYRA+ DQ+ + + + LR +AA Y+RTH ++F PF+G E T+FE YC +V S A WGGQ
Sbjct: 138 AQQEAEREQRIQEEQNNVVSERVLEDQQLEGKLAPLGYTLKEIKSDGHCLYRAVEDQIGLHPELVQYSYQELRILAANYMRTHADDFMPFIGAETTEGDNPDETLQTKFERYCGEVEST--AAWGGQ 262
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A835WC86_CHLIN (OTU domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WC86_CHLIN) HSP 1 Score: 80.1 bits (196), Expect = 1.020e-14 Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 10 KKKSKDAEKEAVRLQIQAENS---GPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKE--DHNALRGIAAGYIRTHPEEFCPFLGYELGSTE----FEEYCDKVASLTDAEWGGQ 375
K++ K A++EA R AE GPS + +E +++ LA GL ++ I +DG+C+YRA+ DQL G+ DH ALR +AAGYIR+H ++F PF+ E E E YC+++ A WGGQ
Sbjct: 91 KRREKHAQQEAEREARIAEEQAALGPSDKALEEERLAALLAPLGLAIREIRADGHCMYRAVEDQLGQAGAGAAPPPDHLALRRLAAGYIRSHADDFLPFIFDEDEKGEPGEQLEAYCEELEGT--AAWGGQ 219
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: I0YST0_COCSC (Cysteine proteinase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YST0_COCSC) HSP 1 Score: 79.0 bits (193), Expect = 1.270e-14 Identity = 52/130 (40.00%), Postives = 75/130 (57.69%), Query Frame = 1
Query: 7 DKKKSKDAEKEAVRLQIQAENSGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLS----IGSKEDHNALRGIAAGYIRTHPEEFCPFLGYELGS---TEFEEYCDKVASLTDAEWGGQ 375
D K + +AE++A R+ + + G S R IE +++ LA GL V++I +DG+CLYRA+ +QL + D+ A+R AA Y+RTHP++F PF+ E G FE YC VA A WGGQ
Sbjct: 75 DAKAAAEAERDA-RIAEEQDAMGDSDRVIEERELAATLAPLGLAVRSIPADGHCLYRAVEEQLGAAGCEELLPPPRDYWAVRAKAAAYMRTHPDQFLPFIPQEDGEDVGAAFEAYC--VAVENSAAWGGQ 201
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A7S0NT02_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NT02_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 1.490e-14 Identity = 45/107 (42.06%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 70 SGPSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKEDHNALRGIAAGYIRTHPEEFCPFLGYE-----LGSTEFEEYCDKVASLTDAEWGGQ 375
+GPS R++E++ + KLA GL V I +DG+CLYR++ADQ+Q + + R AAGYIR+HP +F P+L E + +EYCD + AEWGGQ
Sbjct: 142 AGPSAREVEMEALMAKLAPLGLRVLEIPADGHCLYRSLADQMQRHGEQTATFQHCRRD-AAGYIRSHPADFLPYLVAEGAEGVADAQSVDEYCDVIEGK--AEWGGQ 245
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Match: A0A507DY51_9FUNG (OTU domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DY51_9FUNG) HSP 1 Score: 79.3 bits (194), Expect = 2.290e-14 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 10 KKKSKDAEKEAVRLQIQAENSG-PSRRDIELQQINGKLAGDGLHVKTIISDGNCLYRAIADQLQVLSIGSKEDHNALRGIAAGYIRTHPEEFCPFL----GYELGSTEFEEYCDKVASLTDAEWGGQPRTES 390
+K+ K AE EA+R E + P+++++E I L GL +K I DG+C+Y A+A QL V + + + +R +AA ++RTH ++F PFL G L E++ YCD V D WGGQ ++
Sbjct: 123 RKQRKVAEFEAMRRAAAEEAANMPNQKEVEDSAIAEMLVPLGLQIKQIAPDGHCMYNAVAHQLSVRAGDDSKTYKDIRSLAADFLRTHTDDFIPFLVNKNGDMLNPDEYQAYCDGVERTAD--WGGQTELQA 252 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1609.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1609.1.1 >prot_P-littoralis_Contig1609.1.1 ID=prot_P-littoralis_Contig1609.1.1|Name=mRNA_P-littoralis_Contig1609.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=153bp IQDKKKSKDAEKEAVRLQIQAENSGPSRRDIELQQINGKLAGDGLHVKTIback to top mRNA from alignment at P-littoralis_Contig1609:3526..4158+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1609.1.1 ID=mRNA_P-littoralis_Contig1609.1.1|Name=mRNA_P-littoralis_Contig1609.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig1609:3526..4158+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1609:3526..4158+ >mRNA_P-littoralis_Contig1609.1.1 ID=mRNA_P-littoralis_Contig1609.1.1|Name=mRNA_P-littoralis_Contig1609.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=459bp|location=Sequence derived from alignment at P-littoralis_Contig1609:3526..4158+ (Pylaiella littoralis U1_48)back to top |