mRNA_P-littoralis_Contig1605.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 180 bits (456), Expect = 4.340e-51 Identity = 102/198 (51.52%), Postives = 131/198 (66.16%), Query Frame = 1
Query: 4 ATFHKFCKNFAKEMFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTSG-GVST--WRSRLPSTAGRAIGVT*GFTGATNDKT----DHPLRRSRTD---HQKQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL 567
ATFH+F + FA+EM+ HI+LPTG YQ +VM Y +LGF+GA GSTDVTH+ WGMCP+ + S+T G T ++ + T R + VT GFTG+TNDK+ D + + R D +K+ +V + T + K LVDNGYH+WVTL+ PSKY D +D AFSK LESVRKDVECFFGI+KGRFRIL
Sbjct: 188 ATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTK-RVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQL------KGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRIL 378
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.690e-49 Identity = 101/198 (51.01%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 7 TFHKFCKNFAKEMFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTSGGVSTWRSRLPSTA--------GRAIGVT*GFTGATNDKT----DHPLRRSRTDHQ---KQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGR 555
TFHKFC++FA EMF+ HIYLPTGTY DEVM + +LG+TGA GSTDVTH+GW MCPF SFT + P+ A GR + VT GFTGATNDKT D + + RT Q ++ ++ + T R + +VDNGYHEWVTL+APSKY +D AFS+ LESVRKDV CF ILK R
Sbjct: 67 TFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTG------KEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMR------RGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF-RILKLR 251
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.130e-48 Identity = 95/194 (48.97%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 4 ATFHKFCKNFAKEMFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTS--GGVSTWRSRLPSTAGRAIGVT*GFTGATNDKT----DHPLRRSRTDH-QKQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRI 564
+TFH+FCK FA E+++ ++YLPTG +VM+ Y ++GF GA+GSTDVTH+ WGMCP+ + +T G + +GR + VT GFTGATNDKT D + R RTD +Q + Q G+ K LVDNGYH+W TL+ PSK D D FSK LES RKDVEC+FGILKGRFRI
Sbjct: 113 STFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFE----EKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRI 302
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 172 bits (435), Expect = 6.990e-48 Identity = 95/194 (48.97%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 4 ATFHKFCKNFAKEMFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTS--GGVSTWRSRLPSTAGRAIGVT*GFTGATNDKT----DHPLRRSRTDH-QKQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRI 564
+TFH+FCK FA E+++ ++YLPTG +VM+ Y ++GF GA+GSTDVTH+ WGMCP+ + +T G + +GR + VT GFTGATNDKT D + R RTD +Q + Q G+ K LVDNGYH+W TL+ PSK D D FSK LES RKDVEC+FGILKGRFRI
Sbjct: 204 STFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFE----EKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRI 393
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 169 bits (428), Expect = 8.670e-48 Identity = 97/196 (49.49%), Postives = 124/196 (63.27%), Query Frame = 1
Query: 1 RATFHKFCKNFAKEMFEGHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTSG-GVSTWRSRLP-STAGRAIGVT*GFTGATNDKT----DHPLRRSRTDHQKQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRI 564
+ FHKFCK+FA+EM++ HIYLP+ D VM Y +LGF+GA+GS DVTH+GW CP+ + S+T GV T ++ + AGRAI VT GFT +TNDKT D + + RTD+Q + + ++ K LVDNGYH+W LM P+KY +D FSK LESVRKDVECFFGILKG FRI
Sbjct: 127 QTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQY---TEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRI 319
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 172 bits (436), Expect = 3.840e-47 Identity = 107/222 (48.20%), Postives = 128/222 (57.66%), Query Frame = 1
Query: 13 HKFCKNFAKEMFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTSG-GVSTWRSRLP-STAGRAIGVT*GFTGATNDKT----DHPLRRSRTDHQ------KQQSVQGSVQTGRWMAWSSPGKDAVDLVDNG----------YHE---------------WVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL 567
HKFC++FA EMF+ HIYL TGTY DEVM + +LG TGA GST+VTH+GW MCPF SFT G T + AGRA+ VT GFTGATNDKT D + + RT+ Q K + G+ +T R +VDNG +H+ WVTL+APSKY +D AFS+ LESVRKDVECFFGILKGRFRIL
Sbjct: 246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFL---------IVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRIL 458
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 166 bits (421), Expect = 3.640e-46 Identity = 94/195 (48.21%), Postives = 117/195 (60.00%), Query Frame = 1
Query: 7 TFHKFCKNFAKEMFEGHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTS--GGVSTWRSRLPSTAGRAIGVT*GFTGATNDKT----DHPLRRSRTDHQKQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL 567
FH+FC++FA EM++ HI+LP+ D VM Y KLGF GA+GSTDVTH+GW CP+ S+T G + + AGR + VT GFTG+TNDKT D + R RTD +Q + + + K +VDNGYH+W L+ PSKY D FSK LESVRKDVECFFGILK RFRIL
Sbjct: 158 VFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTD---KQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRIL 349
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.810e-45 Identity = 100/201 (49.75%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 1 RATFHKFCKNFAKEMFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTSG-GVSTWRSRLP-STAGRAIGVT*GFTGATNDKT----DHPLRRSRTDHQ------KQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL 567
+A FHKFC++ A EMF+ HIYLPTGTY DEVM + +LG TGA GSTDVTH+G MCPF SFT G T + AGRA+ VT GF G TNDKT D + + RT+ Q K + V G+ +T R +VDNGY+E +D AFS+ LESVRKDVECFFGILKGRFRIL
Sbjct: 161 QALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFL---------IVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRIL 340
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 155 bits (391), Expect = 6.740e-42 Identity = 96/222 (43.24%), Postives = 119/222 (53.60%), Query Frame = 1
Query: 1 RATFHKFCKNFAKEMFEGHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTSG-GVSTWRSRLP-STAGRAIGVT*GFTGATNDKT----DHPLRRSRTDHQKQQSVQGSVQTGRWM--------------------AWSSPG-----KDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL 567
+ FHKFC++FA+EM++ I+LPT D VM Y +LGFTGA+GS DVTH+ W CP+ + S+T G T ++ AGRAI VT GFTG+TNDKT D + + TD ++ G K LVDNGYH+W L+ PSKY +D FSK LESVRKDVECFFGILKGRFRIL
Sbjct: 114 QGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRIL 335
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 149 bits (377), Expect = 3.270e-41 Identity = 87/183 (47.54%), Postives = 110/183 (60.11%), Query Frame = 1
Query: 43 MFEGHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSFTS--GGVSTWRSRLPSTAGRAIGVT*GFTGATNDKT----DHPLRRSRTDHQKQQSVQGSVQTGRWMAWSSPGKDAVDLVDNGYHEWVTLMAPSKYRGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL 567
M++ HI+LPT D V++ Y +LGFTGA+GS DVTH+ W CP+ + S+T G + AGRAI VT GFTG+TNDKT D + + RTD +Q + + ++ K LVDNGYH+W L+ PSKY +D FSK LESVRKDVECFFGILKGR RIL
Sbjct: 1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTD---KQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRIL 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1605.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1605.1.1 >prot_P-littoralis_Contig1605.1.1 ID=prot_P-littoralis_Contig1605.1.1|Name=mRNA_P-littoralis_Contig1605.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=75bp MFEGHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFRHSGSback to top mRNA from alignment at P-littoralis_Contig1605:331..1458+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1605.1.1 ID=mRNA_P-littoralis_Contig1605.1.1|Name=mRNA_P-littoralis_Contig1605.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1128bp|location=Sequence derived from alignment at P-littoralis_Contig1605:331..1458+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1605:331..1458+ >mRNA_P-littoralis_Contig1605.1.1 ID=mRNA_P-littoralis_Contig1605.1.1|Name=mRNA_P-littoralis_Contig1605.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=225bp|location=Sequence derived from alignment at P-littoralis_Contig1605:331..1458+ (Pylaiella littoralis U1_48)back to top |