mRNA_P-littoralis_Contig160.56.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig160.56.1
Unique Name	mRNA_P-littoralis_Contig160.56.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 6.080e-115
Identity = 169/221 (76.47%), Postives = 186/221 (84.16%), Query Frame = 2

Query:  344 RKRIPLLAAAIACPSLLLPRHAVADSIVPTIPAPYNERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFILEGGPFEGEQEVLTKTFLNKRRKQSVAM 1006
            +K + LLAA +A    LLP  A +  IVP IP PY+E+FSGDATYYG  P+G+GNCAIRSPLPEMYDGMIPVALND+QY DS MCGACIEGEG GEG G DPVEG FKAYVTDRCPEC+ GDLDF+  GDGRWDI+W FVPCE  SDQTFLFEGSN+FYWK   IQPRGGRSPVERLW+NG EA RS+DNFFILEGGPF+GEQEV TKT LNKRR+QSVAM
Sbjct:    6 KKPLLLLAATLAA---LLPPRARSAMIVPLIPPPYDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWK---IQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFDGEQEVHTKTVLNKRRRQSVAM 220

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 1.320e-55
Identity = 106/200 (53.00%), Postives = 129/200 (64.50%), Query Frame = 2

Query:  386 SLLLPRHAVADSIVPTIPAPYNERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFILE-GGPFEGEQEVLTKTFLNK 982
            +LLLP    A S     P  Y   F GD TYYG    G  NCAIRSPLP MY GM+PVA+N+ QY +S  CGAC+   G G+G+GA+PV G FKAYV DRCPEC  GD+D S SGDGRW + WRF+PC       FLFEGSN FY K   +QPRG ++PV    VNG + +++QDNF+IL+ GG F     V  +T LN+
Sbjct:    5 TLLLPIAVTALS-----PGDYRRTFFGDGTYYGYTTRG--NCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEW-VFFLFEGSNRFYLK---LQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRTVLNE 193

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 7.240e-54
Identity = 93/177 (52.54%), Postives = 119/177 (67.23%), Query Frame = 2

Query:  446 YNERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFIL--EGGPFEGEQEVLTKT 970
            Y E +SG+ TYYG      G C+    +PEMYDGMIPVALN +QYGDS MCGAC+EG  SG G+G +P+   FKA++TD+CPEC  GDLDFS+SGDGRWDI W+FV C    + +F+   +N +YWKV   QPRG  +PV  L V+G  A R+ DN F +  +G  + G Q V+T T
Sbjct:  104 YGEEYSGEGTYYGHTT--AGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGE-ETSFVSPSANPYYWKV---QPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTT 274

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 192 bits (487), Expect = 3.680e-52
Identity = 93/183 (50.82%), Postives = 123/183 (67.21%), Query Frame = 2

Query:  437 PAPYNERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFILE-GGPFEGEQEVLTKTFLNK 982
            P  Y   F G+ TYYG    G  NCAIRSP+P MY+GM+PVA+N+ QY +S+ CGAC++  G G+G+GA+P+ G FKAYV DRCPEC  GD+D S  GDGRW + W+F+PC       FLFEGSN +Y K   +QPRG ++PV  L V G   +++QDNF+I++ GG F     V  +T LN+
Sbjct:   22 PNDYYRVFHGEGTYYGYTTRG--NCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEF-VFFLFEGSNRYYLK---LQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRTVLNE 198

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 4.470e-49
Identity = 91/178 (51.12%), Postives = 113/178 (63.48%), Query Frame = 2

Query:  446 YNERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFILE---GGPFEGEQEVLTKT 970
            Y   F+G+ TYY       GNC      P +YDGM PVALN+ QYGDS MCGAC+EGEG+G G+G+DPV G FK ++ D+CPEC  GDLDF    DGRWDI W+FV C A  + +F  E   ++YWK   IQPRG  +PVE L + G  A+R+ DN F LE   G P+   Q V+T T
Sbjct:  311 YGITFNGEGTYY--TGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWK---IQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTT 482

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.730e-44
Identity = 92/194 (47.42%), Postives = 112/194 (57.73%), Query Frame = 2

Query:  398 PRHAVADSIVPTIPAPYNERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFILE---GGPFEGEQEVLTKT 970
            P  + A+S  P     Y   F GD TYY  I    GNC      P +Y GM PVALN  QYGDS MCG+C+EGEG+G G G +P+ G FK ++ D+CPEC  GDLDF    DGRWDI WRFV C    + +F       +YWK   IQPRG  +PVE L + G  A+R+ DN F LE   G P+   Q V+T T
Sbjct:  332 PSMSEAESKTPISGGVYGTTFEGDGTYYTGI--SAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGE-EVSFKVVEMTPYYWK---IQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTT 518

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: A0A1S3HSP2_LINUN (uncharacterized protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN)

HSP 1 Score: 117 bits (293), Expect = 6.620e-26
Identity = 66/170 (38.82%), Postives = 98/170 (57.65%), Query Frame = 2

Query:  446 YNERFSGDATYYGEIPN-GEGNCAIRSPLP-EMYDGMIP--VALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWV-NG-----VEASRSQDNFFIL 925
            Y +RF G+ TYYG+  N  +  C +RS LP ++ D  I    A+N +Q+  S  CG C+   GSG+G G +P+ G +  YVTD CP C  GD+DF++ GDGRW+I +  VPC  + + ++ F+ S+ +Y K   IQ    R PV  + + NG     V   R+ D F+I+
Sbjct:   30 YQKRFFGEGTYYGQSYNQAKETCQLRSMLPGKLSDYGIDSTAAINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIK---IQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWIM 196

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: W7TX31_9STRA (Barwin-related endoglucanase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX31_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.610e-23
Identity = 70/184 (38.04%), Postives = 93/184 (50.54%), Query Frame = 2

Query:  464 GDATYYGEIPNGEGNCAIRSP----LPEMYDGM-IPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQT-FLFEGSNDFYWKVGVIQPRGGRSPVERL-------WVNGVEASRSQDNFFILEGGPFEGEQEV-LTKTF 973
            G +TYYG    G G C +  P    +P    G+   VAL+  Q+ D   CG CI   G+G GAG +PV G + A+V + CPEC  G LDF++ GDG W+I W+ +PC+    +  F+F GSNDFY KV     +  R P + L       W  G     S   F   +G PF    EV +T  F
Sbjct:   40 GRSTYYGNY-GGGGACGLDQPDGSAIPAEIQGIDFTVALDQPQF-DVGGCGMCILLNGTGVGAGGNPVNGIYTAFVNNLCPECEYGHLDFALPGDGSWEIEWKAIPCDVRDHKIRFVFMGSNDFYLKVST---QASRFPTKALRLKMGGEWREGWPVHGSYFEF--RDGAPFTFPMEVEITSVF 216

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: A0A210QW07_MIZYE (Expansin-YoaJ n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QW07_MIZYE)

HSP 1 Score: 104 bits (260), Expect = 1.460e-21
Identity = 61/161 (37.89%), Postives = 79/161 (49.07%), Query Frame = 2

Query:  446 YNERFSGDATYYGEIPNGEGNCAIRSPL--PEMYDGMIP--VALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQT-FLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDN 913
            Y   F+GD TYY     G   C+   P   P  Y   I   VALN  Q+  S  CG C    GSG G G +P+ G    +V D CPEC  GD+DFS + DGRW+I+ R + C   +    + F+GSN++Y K   +Q R  R P     V   + S S  N
Sbjct:   25 YKNSFTGDGTYYWNTEGG--TCSYPPPELPPVAYHPNITDLVALNSHQFFGSHACGMCFSVNGSGVGLGLNPIIGQHIVFVKDMCPECKKGDVDFSETADGRWNISIRAIQCPVGNTSIEYKFQGSNEYYLK---LQVRNARIPATSFEVKLPDMSWSHFN 180

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BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Match: A0A017SU80_9DELT (Rare lipoprotein A n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SU80_9DELT)

HSP 1 Score: 96.3 bits (238), Expect = 1.920e-18
Identity = 63/179 (35.20%), Postives = 83/179 (46.37%), Query Frame = 2

Query:  452 ERFSGDATYYGEIPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGAGADPVEGPFKAYVTDRCPECVPGDLDFSVSG--------DGRWDITWRFVPCEASSDQTFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNG-----VEASRSQDNFFILEG---GPF 940
            E  SG+ TYY    +G GNC+     P     ++  A+N   Y  S+ CGACIE EG        PV G     + DRCPEC+PGD+D S            GR  ITWR+V C  S    + F+ S++ +W    +Q R  R P+    V       V  +R   N+F  EG   GPF
Sbjct:   65 ETHSGEGTYYAA--DGSGNCSF----PPSPGDLLVAAMNQTDYAGSAACGACIEVEG--------PV-GTVTVRIVDRCPECLPGDVDMSPEAFAHVAAMESGRVPITWRYVGCGLSGSVVYHFKDSSNPWWMQ--VQVRNHRYPIAEFAVRTEDGQYVALARENHNYFTGEGLGEGPF 226

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig160.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LHU1_ECTSI	6.080e-115	76.47	Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879...	[more]
F2Z7J0_9FLOR	1.320e-55	53.00	Uncharacterized protein n=1 Tax=Gracilariopsis and...	[more]
D8LRN1_ECTSI	7.240e-54	52.54	Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2...	[more]
A0A2V3ISL2_9FLOR	3.680e-52	50.82	Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=...	[more]
D8LGP4_ECTSI	4.470e-49	51.12	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KBW3_9PHAE	7.730e-44	47.42	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A1S3HSP2_LINUN	6.620e-26	38.82	uncharacterized protein LOC106157840 n=1 Tax=Lingu...	[more]
W7TX31_9STRA	3.610e-23	38.04	Barwin-related endoglucanase n=1 Tax=Nannochlorops...	[more]
A0A210QW07_MIZYE	1.460e-21	37.89	Expansin-YoaJ n=2 Tax=Mizuhopecten yessoensis TaxI...	[more]
A0A017SU80_9DELT	1.920e-18	35.20	Rare lipoprotein A n=2 Tax=Chondromyces apiculatus...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig160	contig	P-littoralis_Contig160:335344..341482 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LHU1
Model size	2151
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K20628
Hectar predicted targeting category	signal peptide
Exons	4
Evalue	2.17e-122
EggNOG OGs	2D16Q@1\|root,2SGXE@2759\|Eukaryota
Ec32 ortholog description	RlpA-like double-psi beta-barrel domain
Ec32 ortholog	Ec-18_000450.1
Cds size	672
BRITE	ko00000

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig160.56.1	prot_P-littoralis_Contig160.56.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig160 336486..339114 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789775.6195788-UTR-P-littoralis_Contig160:335343..336485	1680789775.6195788-UTR-P-littoralis_Contig160:335343..336485	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig160 335344..336485 -
1680789775.658746-UTR-P-littoralis_Contig160:339114..339124	1680789775.658746-UTR-P-littoralis_Contig160:339114..339124	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig160 339115..339124 -
1680789775.6684697-UTR-P-littoralis_Contig160:341155..341482	1680789775.6684697-UTR-P-littoralis_Contig160:341155..341482	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig160 341156..341482 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789775.6327977-CDS-P-littoralis_Contig160:336485..336659	1680789775.6327977-CDS-P-littoralis_Contig160:336485..336659	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig160 336486..336659 -
1680789775.6417315-CDS-P-littoralis_Contig160:337541..337692	1680789775.6417315-CDS-P-littoralis_Contig160:337541..337692	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig160 337542..337692 -
1680789775.6503067-CDS-P-littoralis_Contig160:338767..339114	1680789775.6503067-CDS-P-littoralis_Contig160:338767..339114	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig160 338768..339114 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig160:335344..341482-
coding sequence from alignment at P-littoralis_Contig160:335344..341482-

protein sequence of mRNA_P-littoralis_Contig160.56.1

>prot_P-littoralis_Contig160.56.1 ID=prot_P-littoralis_Contig160.56.1|Name=mRNA_P-littoralis_Contig160.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp
MVRKRIPLLAAAIACPSLLLPRHAVADSIVPTIPAPYNERFSGDATYYGE
IPNGEGNCAIRSPLPEMYDGMIPVALNDDQYGDSSMCGACIEGEGSGEGA
GADPVEGPFKAYVTDRCPECVPGDLDFSVSGDGRWDITWRFVPCEASSDQ
TFLFEGSNDFYWKVGVIQPRGGRSPVERLWVNGVEASRSQDNFFILEGGP
FEGEQEVLTKTFLNKRRKQSVAM*

mRNA from alignment at P-littoralis_Contig160:335344..341482-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig160.56.1 ID=mRNA_P-littoralis_Contig160.56.1|Name=mRNA_P-littoralis_Contig160.56.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6139bp|location=Sequence derived from alignment at P-littoralis_Contig160:335344..341482- (Pylaiella littoralis U1_48)
GTTTTATTGGCATGGATGCGCAGTTCGATTATCGGGTACGTACGTGAATG
CGCAGTAACGCCTCCCCGCCACGGAGGGACGGGAAGAGTCACTACTGTAG
ACTGACTCCACGGACTGTCACAAAAGAGCGCCAACGCGGCTCCGTAGAAA
CCCCAATACCTCACAACAGCCCCACGGGAGCCAGCAGCTCAGAAGCCCAG
CCTAGAATCCCAGTCCAGCAGCCCAACAGCCGTGCAGCCAGCCCACAGCA
GCCAGCAGTAATTGCAGCCAGCAGCAGCCGGCGCTGTTGCAAAAGTTAGG
TAGAGCAGGCCCGCGTCCCAGCTCAAGGTGAGCAGCTCAAGGTTAGAGAA
AAATGAACCTTTTTCAATTGCGGCCCAGTTCTTGACCCTCTCTGATCTGA
TCAGCCGTGTTGAGTTTGGACTGGCATCGTTGTGGAAAGCGTTTGGCCGG
TGGTGCAAAGGCCTTCGTTCTGTAGCGTCGATACTGAATGTTGAATGTGA
GACTACAGCAAGGCATCGCCTGCTATGAGAGACTATCATGTGTCCACCGC
GCCGTGCCAGAATATTTTAGGTGATGTGTACTTCGTATAACCAGTGTTAC
GGGCGGTCACCCTGTGAAACGAGATGCTGCTCTAGGCGCGAGTGTCAGTA
GCTGTGTGTTCTCGTGTTGCTGTGTGCCGCTCTGCCTCCAAGGGGTGCGC
ACCATGCCAGACCACAAAAGGAGCCTGCAGAGCACGCCACCCAGGCAGCT
GTTGATGCTTCGAACGCTTTCAAACGCCACCATCTGTAAATTTTAGTGCA
GCTTATTCTGCAGCTGTGAGACGTGATGACGGCCTTCAGACATGCACGTC
ACGAAACGCCGTTGGCACTGCTGTGATTCACACTGTGTGTGTGTTGACAT
CCCTTTCATTGGACGCCACTCTACAACTTTCGGGTAGGTAGACGCTCCAA
CCGGGGTCACACAGGGGGAAGTCAACACAGGAGTTTTTTTTTTTTTCCAC
TTCCCTCTGCGGGGCTTGCCGTTTTGGTTGAGTTTTTATCGCGCGAAAGA
TGACAGCAATCTATTGCCCTCGTCGATGGTACGATCGAATTTTGTTTACT
CACGAATTGATCGCTTTCCACTTTCACGCGCAATGTGAGAAAAAGCCCCA
GATCGTGTTTTTACTGCACTGGGATTCGAACTCACGCGTGAATGTCAGAA
GGTTGCGTGATAAAACAACTGAACCGCCGGGGCGACCGGGTCGTCGTTGT
GCATTATATTTTCCCGTAGACCTCAAAGCTTTGGGGCGAGTGAAATCCCA
GAAAAAGACTGGCATGACTTGCGTGACTTTCACAACACAGCAGTACAAGT
GATTTTTTTTCAGTTTTTTTTCTGGAGCATCGAGGTGAAAGAAAACTGCC
AGACAACACTATAAAAGTAATTTTCTCAACAAACCAGAAAACAGGCTCCG
CCTCACTTTTAGTCTCGCGGCAACGATAATTTATTGCTTCCCATAGTATA
CAAAATTCGAAGTTTCGACGAGGGAAAGGGATCGCTGTACCCTTTCTCGC
GAGACAAAATTAAGGCAGGTGCCGTAGTGGGAAGTGGAGGGAAAAAAAAA
AGCTCCTGTGTTGACTTCCTGCTGTGTGACCCCGGTTGGAGCGTCTACCT
ACCCGAAAGGATTGTAGTGGCGTCCAATTCATGGGATGACAACACACGCA
CATACAAAGGACCTCGTGCAGCTTCTGCGATTACATAAATTATTTATTCT
TGTGTTTGTATTTTTTTTTCTTGTGTGCTTTCGGAAATCTCAACCCCATC
TTCTTTTCTACTTCAAAGTATTTTCTTTGTGCTGGGACCTGAACCCTGTA
CCCCAGGGAAAAAAAAAGACATGCGCAATGGAATAGGCCTTGTGACGACG
AATACTCAGGTTTCACACAATCCGCGCCCGCCTCGAGGAACTTGTACTAA
TACGGTGCCGGAAGATAACAGACACCCCAGCACGACTGACCACGCCAACC
AACCCTACATGACACTGTCAGTCGCCGTATGGTTGCAACGAGATGCGCCA
TACTCCAAGCTCACTGGTTCCGCCGCTGTTCGTGCGAAGTGCCAGTAGCT
CCACACACTTATCTCTCTACATATTCCTGTCACTTCTCTCTCTCTCACTA
CTATTTCGCTCCCCCTCACCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCTTTTTTTT
TTGCCACGCCCCTCTCATAACACTTGCAGCAATAAACCTTAGGCAGACCC
ACAGCCCCGTGACAAATACTTTCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTTCAGAATAGTCGACATGGTCCGAAAGAGGATCCCTCTCCTAGCGGC
CGCAATAGCGTGTCCATCTTTGCTGCTTCCTCGGCACGCCGTGGCCGATT
CCATCGTCCCAACGATCCCCGCTCCCTACAACGAGCGGTTCTCCGGCGAC
GCCACCTACTACGGCGAGATCCCGAACGGGGAGGGCAACTGCGCGATTCG
ATCTCCTCTCCCGGAGATGTACGACGGCATGATACCGGTGGCCCTCAACG
ACGACCAGTACGGCGACTCTTCTATGTGCGGCGCGTGCATAGAAGGGGAA
GGGTCCGGGGAGGGTGCAGGGGCCGACCCCGTCGAGGGGCCTTTCAAGGC
TTATGTAACGGACAGGTGTGTACGGGTACGTGCGGTAAGAGTGTAGAGAA
CACGGTTTTTCTTGAACACATCCAAGTTCGTTCCTTCGTTCGTGCCGTGA
CAGGAAGTCGGTGTCGACCACGTACACTTTCGCCGGGTTTTGTGCTGTGG
AGTTTTCCACCTTTTGTGAACGGCTTTCATTTGAGGGGTGCACGACAAGT
GATGAAAGCTTTGGCAGATGCCTCAGACGGAAGGTGGGGGACAATATATG
TATATACTTCGTATATCTGGTACCCAGTGTGTATTATTTTCAAGTGTTTA
CACACTTGTGTGGCCTTCCTCCTTCGTGGCCTTCAGGTGATAATGTAGAC
TGACGTCCAGTGTAGATGACATCACAACGTACAAACACACACAGATGCAC
TTGGAAAGGGGGGCGTACAACAAACTTCAGAAGTGGTTGAGAAAACGTTG
CGAAATGTTTCGGTTAGGTTGTCGGCATGCAGTGTTGTGCCACAGTTTGA
TCTCTTCCACAGATAACACGTCCCCGAAGGAGTCTTTCGGTCGACGGGCT
GATTGTTTCCTGGCCTGTGTTAAGGTTCGAGAATGTAGAAAGCTGGCAGT
TGTGCTTGTATCATATATCCTGCTGATCAGCCGGCTAGCGCGCTCTCTGC
AATCACAATCGTTGAGGCACAACCTCGAATGCCATTCCAACCGAACCTCT
TTGTATCAACAATTCGCCCAAAGCCAACACCTTGGCAGCAGGCTAACCTG
ATGGTGAGATCTAAAGAGGATGTGCGTGAACCTTCTCGATCGGCGCAAGC
ACTGGTGCAGCGATCGCTTCGAGTGCTTTTGTCCCGACAGCAGAAGTCTA
ACGGCGACTGAGTGCTCGAAAGTAGTGTGGATCAAACAATTTGAGTGCTG
TGCTGTCGGTACGCTAGAGGACATCAAGAAATTTGTGCGTATCAAAGATT
CTTCGAAAATGCACCGGTGCTCGAGGCCATCGAACACATGGCTGGTCAAA
CAATCTTGAATGAGTACTATGTTGGATTTTGCCACGCGGTCAGTTTTTAA
GTGTTGACGATGAAGCGTGCCTTGTACTGGTGTACAACAGGTGCCCAGAA
TGCGTTCCAGGCGATTTAGACTTTTCGGTGTCCGGTGACGGGAGGTGGGA
CATTACCTGGCGCTTCGTCCCCTGCGAGGCGAGCTCCGACCAAACCTTCC
TCTTCGAGGGCAGCAACGATTTTTACTGGAAGGTCGGTGTGGTGCGTTGT
GGTGTGGTGTGGTGTGGTGTGGCGTGGTGTCGTGTCGTGTCGTGTCGTGT
CGTGGCGTGGTGTCGTGGGGTCGAGCAGTTGCACAGATTGCGTGGACTTA
TAGGGTGGATGGACATTTTTTTTCATTTTGTGAGGCACTGCATGCGTGAG
AGGCACGGGCATATTGTATACTTCGAGGTACACAGCAGTACACGCTCGCT
TCGTAGAGGATGGGCTAATTTTTTTTTTATCATTTCGTTGCGGTGGGTCT
TTCGCCATACGACGAGATCAGGCGTGCAGACGGCCAGGGTAGGCATCTAT
CTGCTTGCCGATTTCTACCGTGAGGAATCCCATATGTTCGAACGATTGGC
AATTTATTTTGATCGGTAATAGCATTCTACGTGGAACTGAAGTTGGTCAC
CAATCACCTCACGCGACAGTCTAGAAGACAAAATCAACATACCACCGAAA
TTGCTTTGCTGTACTGCTGTAGTGAGGTTCGTCTTCCCTTGCAAAGTAGA
GAGAGGTCAAAACTAATAAAATTAGTAAAAGGTTTTTTTGTGGCATCGGC
ATCGGGGGGCAGGGGGATATAATGTGCGTTGTATCGAAGCTGCCGTATGG
GTTCGCATTTATATTCTTTCCAGTATGTTGCGCGTTGTTCGCTACCGAAA
ACTGACCGAAAGCAGCGGTTGTGTCAAGGGTCACCAAGGAATCGATCGAT
TTTCGTCCCGCCAGCTGGTGTGTACCAGGTCGTTGCTCTCCGTGTGTGCA
TGACTGATGCTGGTACTGCTGCTGTTGTCGTTGTCGCCGCCGTTACGTTC
GTTGCTGGTTTTGTCGTGGTTGTGGCTGTGGATGCTGTTTTTTTTTCTGC
TGCTGCTGCTGCTACTAACTCAGATCCAACCACGTGGGGGGAGATCACCA
GTGGAAAGGCTCTGGGTCAACGGTGTGGAAGCCTCCCGATCGCAGGACAA
CTTTTTCATCCTTGAAGGCGGGCCGTTTGAAGGGGAACAGGAAGTGCTCA
CGAAGACCTTTCTCAACAAGAGGAGAAAGCAGAGCGTGGCCATGTAGCTC
AACCAGCCTTCTACAGTAGTCATGTCGAACCACTGCACGTGTTTACATCG
TTACCATCCATGGTGTCGTTGTTGTGTTGGTGACAGACGGACGGCTTTCG
GCTGGACCCCCATGAGGGAGAAAACTCGGCTGACCCCCTGTTTGGATGTC
ATGTACGCTTCAGCATCGGCTCCCCAAAGGGTTGCACAGGCTTGGGTACC
ACTGCCACGTGCAATGAGGCGGTTAGATCACGGCTTCGTTACACGCCGGC
GTGCAGAACGAGCGGTGGTATCGAAGCCATCACAACAACAACCTCAAGGT
ACGTGGGTGACCGCTTGACTTTGTCCTTATTCGACGGACGTGGAAGCCTT
TGGATTACCTTTTGTTGTGAGGCGGGACGTCGATGTTGGAACCAGCATCA
GCGGGCGCGCGGGGGGGGGGAGCGGTGCTTGAACTGGTGCGTGATGGAAC
TCCGTCGACCCTTCCGATGCCCACCTACAGCGTCGACTTTCGTCTGCTGT
AATCCGCATGGCACGGCACTTGTAGGCACTCTTTTCCTTCTTTCATTGTA
TCCGAATTTCTTGTACATATTTTTCAATAGCAGTATGAAGCACTGGGAAT
AAAAAAACCTAGAGCGTGGTACTCTGCTGTATCAAGCTTCCTCTCTTGGT
CCCTCTGCTATCTCCGTTTGTTTTACTTTTTTCGGCCTCCTTTACTCGTA
ATACTCCGTATTTACTTTCTCTCGAAGTCTGTACGCGTACGTTTTGTTTT
TTCGTCGCCCTAAAAGTTCCCCCGTTCGACGATATCTGGATGCTGGCTTT
CTTTATTTTTATTTTTATCTATTAAAGTACGATACTGGAAATGCATGGAC
ACTTGCTACTCGTACACAAAATTTGTTGCTGCCTTTGGTTTGTGGCGTGG
TAATGTACGTGGCGATTGGCGGTGAAGTCGCAGCTGTTCCTGTTGTGCTC
CGCTGCTGTCGACGCATGAAAAATACAGATTGAACGAGTTGTTTTTTTTA
CGCATTTCGGGTCAATGGACCCGTATTCGAAATGTCAATGGACCCGTACT
CGTGAAAGCGCTGCTCATTATTACGTGAAGAAAAAACAGACAAAAAAAAG
CAAACGAAGCACGACGAAGGAAAGGAGTTGAGGCAAGCA

Coding sequence (CDS) from alignment at P-littoralis_Contig160:335344..341482-

>mRNA_P-littoralis_Contig160.56.1 ID=mRNA_P-littoralis_Contig160.56.1|Name=mRNA_P-littoralis_Contig160.56.1|organism=Pylaiella littoralis U1_48|type=CDS|length=672bp|location=Sequence derived from alignment at P-littoralis_Contig160:335344..341482- (Pylaiella littoralis U1_48)
ATGGTCCGAAAGAGGATCCCTCTCCTAGCGGCCGCAATAGCGTGTCCATC
TTTGCTGCTTCCTCGGCACGCCGTGGCCGATTCCATCGTCCCAACGATCC
CCGCTCCCTACAACGAGCGGTTCTCCGGCGACGCCACCTACTACGGCGAG
ATCCCGAACGGGGAGGGCAACTGCGCGATTCGATCTCCTCTCCCGGAGAT
GTACGACGGCATGATACCGGTGGCCCTCAACGACGACCAGTACGGCGACT
CTTCTATGTGCGGCGCGTGCATAGAAGGGGAAGGGTCCGGGGAGGGTGCA
GGGGCCGACCCCGTCGAGGGGCCTTTCAAGGCTTATGTAACGGACAGGTG
CCCAGAATGCGTTCCAGGCGATTTAGACTTTTCGGTGTCCGGTGACGGGA
GGTGGGACATTACCTGGCGCTTCGTCCCCTGCGAGGCGAGCTCCGACCAA
ACCTTCCTCTTCGAGGGCAGCAACGATTTTTACTGGAAGGTCGGTGTGAT
CCAACCACGTGGGGGGAGATCACCAGTGGAAAGGCTCTGGGTCAACGGTG
TGGAAGCCTCCCGATCGCAGGACAACTTTTTCATCCTTGAAGGCGGGCCG
TTTGAAGGGGAACAGGAAGTGCTCACGAAGACCTTTCTCAACAAGAGGAG
AAAGCAGAGCGTGGCCATGTAG