mRNA_P-littoralis_Contig160.50.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig160.50.2
Unique NamemRNA_P-littoralis_Contig160.50.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: D8LHT9_ECTSI (Ferroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT9_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.140e-64
Identity = 149/287 (51.92%), Postives = 177/287 (61.67%), Query Frame = 3 
Query:   54 SHLNRRKHAAMLTSMRALRAWTTTNTNRLAIHDLRHQQAPVSTSTXXXXXXXXXXXSYFGDAVRPSTTDRRTTQVSCPSLARVPWKLSVESLSGLWHGCGHNTDSCGLSGVIGTAALVHSSSRSIRSGDFEARAAALVGGISIDSRLRGNEPASVFPSVVLARGRASVPRRGMSSSTISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            S L + +  A+L +M+A+RA T  NTN   +     Q+   ST+                  +RP         V  PS A     ++ +S S L   CG       L    G       S R+ R     AR++A +GG SI     G   AS         G  S+ R+GMSS+T+SE+EFHSVADEALEEIHD XXXXXXXGFED+FDC+MSQGVLNI VG+RGTWVLNKQSPNRQIWWSSPISGPMRFEYHE++KRWLNTRDGETELRVILATEMSEKCGVS+
Sbjct:    8 SRLVQEESTALLANMQAVRASTRNNTNITLMQYSAAQRRSTSTTIAVAEVAG-------ASPLRP---------VRLPSNAG---SMAEKSYSSLSVACGRIVVGARLDTCCGGG-----SGRN-RGSSLTARSSAPMGGASIIGTGAGETVAST--------GVVSMQRQGMSSTTMSEQEFHSVADEALEEIHDXXXXXXXXGFEDDFDCNMSQGVLNIAVGDRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEEAKRWLNTRDGETELRVILATEMSEKCGVSV 261
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A6H5JR67_9PHAE (Ferroxidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR67_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 2.720e-64
Identity = 150/287 (52.26%), Postives = 179/287 (62.37%), Query Frame = 3 
Query:   54 SHLNRRKHAAMLTSMRALRAWTTTNTNRLAIHDLRHQQAPVSTSTXXXXXXXXXXXSYFGDAVRPSTTDRRTTQVSCPSLARVPWKLSVESLSGLWHGCGHNTDSCGLSGVIGTAALVHSSSRSIRSGDFEARAAALVGGISIDSRLRGNEPASVFPSVVLARGRASVPRRGMSSSTISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            S L R++ +A L +M+A+RA T  NT ++ +      Q P STST           S    A  PS     TT  S  SL     ++ V +    W  CG      G SG          SS         AR++  +GG S+     G         +V + G  S+ R+GMSS+T+SE+EFHSVADEALEEIHD XXXXXXXGFED+FDC MSQGVLNI+VG+RGTWVLNKQSPNRQIWWSSPISGPMRFEYHE+SKRWLNTRDGETELRV+LATEM EKCGVS+
Sbjct:    8 SRLVRKESSAQLANMQAVRASTRKNT-KITLTQYSAAQ-PRSTSTTIEAAEVAGVSS-LRPARLPSNAGNMTT-TSYSSLCGASGRILVGARLDTW--CG------GGSGXXXXXXRRRGSS-------LTARSSVPMGGASMIGPGAGE--------IVTSMGVVSMQRQGMSSTTMSEQEFHSVADEALEEIHDXXXXXXXXGFEDDFDCTMSQGVLNIIVGDRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEESKRWLNTRDGETELRVLLATEMGEKCGVSV 267
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A835Z0Y0_9STRA (Ferroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.290e-28
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 3 
Query:  579 STISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            +T+SE +F  +AD+ LE IHDA       G++ +FD ++SQGVLN  +   GTWV+NKQ+PNRQIWWSSP+SGP R+E+   ++ W+NTRDG  +L  +L  E+ E   + L
Sbjct:    2 TTMSEAQFQDLADDTLERIHDALEQLLEGGYDGDFDVNLSQGVLNASIPPHGTWVINKQTPNRQIWWSSPVSGPRRYEWDAAAEHWVNTRDGG-DLAELLQREIRETTQLEL 112
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: W7TU91_9STRA (Ferroxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU91_9STRA)

HSP 1 Score: 112 bits (279), Expect = 8.430e-25
Identity = 60/135 (44.44%), Postives = 82/135 (60.74%), Query Frame = 3 
Query:  510 ASVFPSVVLARGRASVPRRGMSSSTISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            A++F   V +  R +           +ER+FH VADE L+E+  A         ED ++ ++SQGVLNI +G  GTWVLNKQ+PNRQIWWSSP+SGP+RFEY   +K W+ TRD   EL  +L  E+    G+ +
Sbjct:   68 ATLFSHFVSSSSRTNAEEVQNQGGFPTERDFHVVADETLDEVQ-ASVDALEDVVED-YEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRD-RRELFALLREEVKRVAGIDI 199
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A024GQQ3_9STRA (Ferroxidase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GQQ3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.810e-23
Identity = 60/132 (45.45%), Postives = 80/132 (60.61%), Query Frame = 3 
Query:  519 FPSVVLARGRASVPRRGMSSSTISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            F   VL R  A +P   M      E EF  +AD ALEEI D+          D+ D  +SQGVL I + + G+WV+N+Q PN+Q+WWSSP+SGP R+EY+  SK W NTRD +TEL+ +L  E+ E  G S+
Sbjct:   43 FQRKVLTRTFADIPHFDME-----EHEFVHLADSALEEIFDSMGDVEDA--IDDADITLSQGVLKIDLADAGSWVINRQVPNKQLWWSSPLSGPRRYEYNPKSKCWENTRD-KTELKDLLKREIEEAIGASV 166
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A7S2WV83_9STRA (Ferroxidase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV83_9STRA)

HSP 1 Score: 105 bits (262), Expect = 4.420e-23
Identity = 58/108 (53.70%), Postives = 68/108 (62.96%), Query Frame = 3 
Query:  549 ASVPRRGMS-----SSTISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHM--SQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRD 851
            AS  RRG       SS  SEREFH VAD  L+ I+D          EDE+D  +  SQGVLNI     GTWV+NKQ+PN+QIWWSSP+SGP+RFEY   S+ W  TRD
Sbjct:   24 ASALRRGCPLTRALSSFSSEREFHDVADGVLQRIYDRIE-----SIEDEYDIDLALSQGVLNIETPASGTWVINKQAPNQQIWWSSPLSGPLRFEYDAVSETWAGTRD 126
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A5A8CMX1_CAFRO (Ferroxidase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CMX1_CAFRO)

HSP 1 Score: 104 bits (260), Expect = 6.290e-23
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 3 
Query:  579 STISEREFHSVADEALEEIHDAXXXXXXXGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCG 905
            S ++E EFH +AD+ LE++           F D+ +   SQGVL   +G++GT+VLNKQ+PNRQ+WWSSP+SGP RF ++ + K+W+ TRDG TEL  +L  E+ +  G
Sbjct:   30 SELNEAEFHGIADDLLEDLE--GRLDALDDFLDDAELTNSQGVLTASLGDKGTYVLNKQTPNRQVWWSSPVSGPKRFYWNAEEKKWMGTRDG-TELVSLLRRELKQLLG 135
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A8K1FGM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGM4_PYTOL)

HSP 1 Score: 105 bits (263), Expect = 6.720e-23
Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 3 
Query:  480 IDSRLRGNEPASVFPSVVLARGRASVPRR-GMSSSTISEREFHSVADEALEEIHDAXXXXXXXGFE---DEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            + S +R   P+    SV  A   +S+ R    +   + E  F  +A++ L EI +        G E   DE D  +SQGVL I +G+ GTWVLN+Q PNRQIWWSSPISGP R+E    + +WLNTRD +TEL  +L  E+S+  G+S+
Sbjct:   33 VSSLVRRGSPSFALQSVQHAPVNSSLARAFSTTDEAMDENRFMEIAEDTLHEIMN-----WLDGIEEMLDESDITLSQGVLKIDLGDCGTWVLNRQIPNRQIWWSSPISGPRRYELDAATGKWLNTRD-KTELFELLQEEISDATGISI 175
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: A0A485KXT5_9STRA (Aste57867_13307 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXT5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.110e-22
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 3 
Query:  573 SSSTISEREFHSVADEALEEIHDAXXXXXXXGFE---DEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGV 908
            + +T+S+ +F  +++E L EI +A       G E    + D  +SQGVL + +G  GTWVLNKQ PN+QIWWSSPISGP RFEY    K+W NTR+ + EL  +L+ E+ E  G+
Sbjct:   58 ADATLSDADFARLSEETLNEILEAMD-----GIEAILPDADITLSQGVLTVNLGEDGTWVLNKQGPNKQIWWSSPISGPKRFEYDARLKKWFNTREKDQELVELLSIEIEELTGI 167
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BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Match: W2NBF6_PHYPR (Ferroxidase n=9 Tax=Phytophthora TaxID=4783 RepID=W2NBF6_PHYPR)

HSP 1 Score: 104 bits (260), Expect = 1.400e-22
Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 3 
Query:  585 ISEREFHSVADEALEEIHDAXXXXXXXGFED---EFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL 914
            ++E EF  +ADE L +I          G E+   E D   SQGVL I +G  GTWV+N+Q PNRQIWWSSP+SGP R+EY  +S  W+NTRD   EL  +L TE+ +K G+ +
Sbjct:   61 MTENEFMELADETLHDIQS-----WLDGIEEMLEESDIMFSQGVLKIDLGEHGTWVINRQVPNRQIWWSSPVSGPRRYEYDAESGHWVNTRD-RGELMELLRTEILDKTGIEI 167
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig160.50.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHT9_ECTSI1.140e-6451.92Ferroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JR67_9PHAE2.720e-6452.26Ferroxidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A835Z0Y0_9STRA3.290e-2848.21Ferroxidase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
W7TU91_9STRA8.430e-2544.44Ferroxidase n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A024GQQ3_9STRA2.810e-2345.45Ferroxidase n=1 Tax=Albugo candida TaxID=65357 Rep... [more]
A0A7S2WV83_9STRA4.420e-2353.70Ferroxidase n=1 Tax=Rhizochromulina marina TaxID=1... [more]
A0A5A8CMX1_CAFRO6.290e-2345.87Ferroxidase n=4 Tax=Cafeteria roenbergensis TaxID=... [more]
A0A8K1FGM4_PYTOL6.720e-2342.28Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485KXT5_9STRA1.110e-2246.09Aste57867_13307 protein n=1 Tax=Aphanomyces stella... [more]
W2NBF6_PHYPR1.400e-2247.79Ferroxidase n=9 Tax=Phytophthora TaxID=4783 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig160contigP-littoralis_Contig160:297016..303548 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHT9
Preferred nameYFH1
PFAMsFrataxin_Cyay
Model size1611
Max annot lvl2759|Eukaryota
KEGG rclassRC02758
KEGG koko:K19054
KEGG ReactionR00078
KEGG Pathwayko00860,map00860
Hectar predicted targeting categorymitochondrion
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006091,GO:0006464,GO:0006518,GO:0006575,GO:0006725,GO:0006749,GO:0006778,GO:0006779,GO:0006783,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008198,GO:0008199,GO:0009058,GO:0009060,GO:0009507,GO:0009536,GO:0009636,GO:0009987,GO:0010035,GO:0015980,GO:0016043,GO:0016226,GO:0016491,GO:0016530,GO:0016722,GO:0016724,GO:0018130,GO:0018282,GO:0018283,GO:0019222,GO:0019438,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0031323,GO:0031974,GO:0033013,GO:0033014,GO:0033554,GO:0034599,GO:0034641,GO:0034986,GO:0036211,GO:0042168,GO:0042221,GO:0042440,GO:0042493,GO:0042542,GO:0042592,GO:0042762,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043603,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0045333,GO:0046148,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051128,GO:0051186,GO:0051188,GO:0051193,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0070887,GO:0071704,GO:0071840,GO:0098771,GO:0140104,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1903329
Exons3
Evalue1.04e-68
EggNOG OGsCOG1965@1|root,KOG3413@2759|Eukaryota
Ec32 ortholog descriptionFrataxin/CyaY
Ec32 orthologEc-18_000430.1
EC1.16.3.1
Descriptionmetal incorporation into metallo-sulfur cluster
Cds size894
COG categoryP
BRITEko00000,ko00001,ko01000,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789775.2076855-UTR-P-littoralis_Contig160:297015..2977091680789775.2076855-UTR-P-littoralis_Contig160:297015..297709Pylaiella littoralis U1_48UTRP-littoralis_Contig160 297016..297709 -
1680789775.263694-UTR-P-littoralis_Contig160:303525..3035481680789775.263694-UTR-P-littoralis_Contig160:303525..303548Pylaiella littoralis U1_48UTRP-littoralis_Contig160 303526..303548 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789775.2219791-CDS-P-littoralis_Contig160:297709..2978331680789775.2219791-CDS-P-littoralis_Contig160:297709..297833Pylaiella littoralis U1_48CDSP-littoralis_Contig160 297710..297833 -
1680789775.2338817-CDS-P-littoralis_Contig160:298401..2984961680789775.2338817-CDS-P-littoralis_Contig160:298401..298496Pylaiella littoralis U1_48CDSP-littoralis_Contig160 298402..298496 -
1680789775.2463593-CDS-P-littoralis_Contig160:302850..3035251680789775.2463593-CDS-P-littoralis_Contig160:302850..303525Pylaiella littoralis U1_48CDSP-littoralis_Contig160 302851..303525 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig160.50.2prot_P-littoralis_Contig160.50.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig160 297710..303525 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig160.50.2

>prot_P-littoralis_Contig160.50.2 ID=prot_P-littoralis_Contig160.50.2|Name=mRNA_P-littoralis_Contig160.50.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=298bp
MQTMRSSRGLSHLNRRKHAAMLTSMRALRAWTTTNTNRLAIHDLRHQQAP
VSTSTTAAAAAAATTTSYFGDAVRPSTTDRRTTQVSCPSLARVPWKLSVE
SLSGLWHGCGHNTDSCGLSGVIGTAALVHSSSRSIRSGDFEARAAALVGG
ISIDSRLRGNEPASVFPSVVLARGRASVPRRGMSSSTISEREFHSVADEA
LEEIHDAVEEALEDGFEDEFDCHMSQGVLNIVVGNRGTWVLNKQSPNRQI
WWSSPISGPMRFEYHEDSKRWLNTRDGETELRVILATEMSEKCGVSL*
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mRNA from alignment at P-littoralis_Contig160:297016..303548-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig160.50.2 ID=mRNA_P-littoralis_Contig160.50.2|Name=mRNA_P-littoralis_Contig160.50.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6533bp|location=Sequence derived from alignment at P-littoralis_Contig160:297016..303548- (Pylaiella littoralis U1_48)
CGTGCACCCTTCACAGCTGCAACATGCAGACTATGAGATCCTCGCGAGGC
CTATCCCACCTGAATCGGCGGAAGCACGCAGCTATGCTGACTAGTATGCG
TGCACTCAGAGCTTGGACGACGACAAATACCAACAGATTAGCGATTCATG
ACCTACGTCACCAGCAGGCCCCTGTTTCAACATCAACAACAGCAGCAGCA
GCGGCGGCGGCGACGACAACATCGTACTTCGGCGATGCCGTCCGACCGTC
AACCACCGACAGGAGGACTACTCAAGTCTCCTGCCCCTCGCTGGCTCGAG
TGCCCTGGAAGTTGAGCGTCGAAAGTCTATCGGGGTTGTGGCACGGTTGC
GGCCATAACACGGATAGCTGTGGCTTGAGTGGCGTCATTGGAACGGCTGC
GCTGGTTCACAGCAGTAGCCGGAGCATCCGTAGCGGCGATTTCGAGGCAC
GAGCGGCCGCTCTCGTTGGGGGCATCAGCATCGATTCAAGGTTGAGAGGA
AATGAACCAGCATCAGTATTTCCATCAGTAGTACTTGCGAGGGGTCGTGC
ATCTGTGCCGAGGCGGGGAATGTCCTCGTCCACCATATCTGAGCGAGAAT
TCCACTCCGTGGCAGACGAAGCCCTGGAGGAAATCCACGACGCGGTGGAG
GAGGCGCTGGAAGATGGCTTCGAGGATGAGTTTGACTGCCACATGTCGGT
GAGTTGATTTCCACAAAGGAAATATGAAGAAGGCCTTCCATCTGCATGCT
TGCACTAGTGCTGCCCAAGCTTTGACGTTAATGGTCTTGGCGGAGCAATG
ATCTCGATAGAAGTGGTTGATTGCTGGGCAGTTGCCTCGTGGTCGGTCCG
GTCCGTCCGTTGTCGGTGTTGTTTGTGACCGTCTTACCGCCACTCCCCAC
GCATGCTGTTGCTGCTGCTGCTGCTGCTGATGCTGCCGAATCTGCTGATG
CTGCTGCGGCTTCTGCTGCTCTCACTGCTGTTGTTCTGGTGCTGGTTGTG
CTGCAATAGATAGTCGCTGATGGTACGCGTGCTCTCGGCAACTATTGCTG
TAGTGCGCACATCGCCGTATGGCTTGGAAACATCTGTGTTACCTGTGTGT
TCAGCTGCGCTGTTATAGTGTGTGCCTGTACAATTTCGATTCGTTGTGCA
CGTGCGCAAGCTTTTCTCCGCCGGCGCCGCGTTTTTTGTCGCGCTTTCTT
ATGCGGAGCACGCATCTGGCCCGAGGCCACCCTACCCCGCGTATCTCGGT
CACGCCCGATGCCGGCGGCTTGTATGCTCGAGGCGCAAAGTCGTCCGGAC
TGGCTCTATTTTTCAAGGGATTGCGCTAACGCAAATTTTCAGGTTCTGTA
GAACAACGGTTGGGCCTGACGCGGCAGTTGGATACAGAGTCACCAGCGCA
AACAGATGGCGTAGTAGCACTCAGGGGTGGAATGGCAACAGAGCAGCTGG
CTAGGAGGTATAGGAGCCAAAGCACATCCACGCTCGCGCGAGACCCACCC
GCAATACACAAACAACCGACGAGTGATCTGAGTCTATAGTCCGGCGGCCA
GACGTCCTGACGTATGATAAGATCCGTACATCGGGCAACGATCTTCCTCC
TACACCCAGGCAGTTCATGAGCTTAGGTGCACCAGACAGCATGGACGGTG
TTACCAAACCACATTTTTACTTACATTACCACAAGGAATCCACACAAGCG
CACGCGCTCACACGAGCACGTACACAACCGACGAAACGTGGCGCATGACG
TACCAATAAAAACAAGTATGCGGTTCGTACCCCAAGCCATCGGCAATGAC
GTACCAATAAAAACAAGTATGCGATTCGTACCCCAAGCCATCAGCAACAG
AATACAGAAGATACGTTATCTTACAACGACACACAAGCTCCATATACACT
GCTGCTGTAAGACAGCGATGTCAAAACGCAGGCAATGCGAAAACGATGAA
GCGCATCAGCGGCGGTATGGTGGCAGAATCTGTGGCACAGTAGTCCAGAA
GAATAGTAGTACTATTCGTCAAACCCACGCATGCGCAGGCGCACACGTAC
ATGAGGGCATATTTCGCCACGAAAAATGTCGGGTGCCGCATGAGAACAAG
GGTAATTCTGACGGAGTGTGTGCTTGAACCTTTGGAGTTTGGACAGGCGT
TGGCTTTCTCCTCCTTCCTGGTGTGGTTTCCTTCATGTTTGGACGCATCG
TGCACACATTGACATCCACGCATAACAGCAGCAGCAGAAGCAGCAAAAGT
AGCAATGGCACCACGGGGGGTTGCTATCCGTGGGTGCAGTGTATCCCGGG
CAACCTCCTGAAATCAACAAATCGGAATACAATTATGTAGAATATCGGAT
CTTTGGCGTGTTTTTCGCTGCTTGCTGGTTCTTCGTAGGGTTGCAACCTC
CTGTTGTACGCGTGCTCATGTTGGGGTTTCATTCATGAACGGACGCATGC
ACACGCTCAGACACACGCACACACGCAGTGGCAGCAGAACTCGCAAGCTA
CGCAGTGTTCGTAGGCGCCAAGGGAGGGGGTGCCACGCGTTGGTAGGTGC
TGATGTGTTCCGGGCAATCTGAAACTATTAGATAAAACACAATGATACAA
AGAATGCCGAATATTTTGGAGATGTTCAGTTGCTTGCTGCTTTACTCAAG
ATAGCAGCATCCACGTTGGCGCAATGTACTGCTGTACGCCTGCATGGAGG
ATTAGGGACAGACAGGAGAACAAAAAAATACAGCAGTAAAGTCATGGGCG
ACAGCTGTTAGGGGTGCTAATCGCCAAAAAAAACTACAGGAACTATCTCT
GAAATGTGTCCCGGATCTTTCAGATGGCAAATCGGTCGAGCCAACGAAAT
TCCGAGAACCGGTCCCCATTCTCCTAGAAAAAGAATAAATAGCTAGCACC
AGCAGCAGCAGCCAGCGGCTGAGATTCATCTTCGGCTGCAAGCAGCAAAG
GTGCCTTGAGAATCGCCTCGCGATCTTCGTCCAGCGCGTTCGTGGCGACC
GCATAAACCTCGACCTTAACCGTGTTGGGATAACATTCATGTTGGGATCC
TCTTTCATCCGCAACCCGGGGGTGAGCTCGACCACAGACGAGACTAGTGG
CCCAATCGAGTTGAGAGAGTTGCCATGCTGCAAGAACTTCTCGAACAAGC
GCACCGATTCCTCTCCAAACGACCCATCTGGCTTGATCTTGCACTTGACG
CGTTATCTCAACATCTCGAAGACTCAGCCCCACGTTCAGCTGCGCTGCAC
CACCCTTCTCCGAAATTGAGCCTTTCATCCCTTCTGCTTCCGTACCATCT
CCTTCTCCATCGTCGCAACCGTCCCCCTTCTCTTTCGATAATGCAGCGGC
TCGTTGGTATCGTGCACTCTAGTACAGAGAAGCAGCGGGAGAGGTGGAAG
AGAGAAATTTGTCATACACAACAAACCGATACACTTCGCCTGCGTCGTTT
CTGATGGAACCGAACAAAGAGCATATGTCCAGCACCATCCGCAGGATCAG
AGAGAGGTAGAGAGTGCAGCAGTCAGGATCAGCAGCAGCAACGCACACAC
ACCAAATGAGATACCCGAAGGAGAGATCTGGAAAGTGATCGGTGCAGCAG
CAGCAGCAGTTCAGCAGTCAGGAGCACAGACAGCAGGAGCAACGCGCACA
CAAATCAGACAGCAAATGTCGTATGATATCAATAAAAGAGACAGGGCATA
TACCGGAAAAACAGGTGCGGATATGATATAATACAAGAGAGAGAGAGAGA
AAAAGCTGAAAAAAACACCACCCCCAGACCACAACACACGCAGCACATAC
ACACCTTTTCCTTTGCCGGAGCGTTCGCCTTCTTCAGGTGGTCCACTCTC
TAAAGCACGCTGTGTGTCCGAGGCCGCAGACGTAGCGGTGTCGTTCTGTC
CCGTTCTTAACTCGAGCTTTGCGTTGTTGGTCGCAAGCCTTCGCCGGGCG
AGTGTTTTCGAGGTGCCAAAAAAGGCAATCTTCGATTTTTTTATTGGGAG
GAGCAAATTTGTTTCCGGGCAGAGACCCCCGAAATGATGGCGAAGAGGCC
ATTTTTGACACACGCGTGCTCTACGGTGCCCTACGTAAAGCGAGTTCTGT
TTTGTGCTGTATAATAATCTCCATTTCTCAATATTTGGAGCAACCCAACC
GTCGGGACAAGGGATACACCAAAAGTGTTGAAATAACAGGCTTTTTGCTT
TTTTTCGGCCCCCTCTTGAAGCAAATGAAGATTGAAGCCTATATGACAGT
GCAAGCAAAGTATTACGAGCCAACATCTCCCTGGGCGCAAGGACACAGCC
TCCAAAGTATAATGTAAAAGCGCTCTGCAATCAAGTACTTTTGGTGCTCA
GCATCCTGGGGCACCTCTTTTTTTTTTTGTTGAGCTGAACTTTGCGAACT
TGTTCAAATAGACCGTACAGTTTTTTACGCACATACAAGGTCGGCTTAGC
ACCCCTAACTGTCTGTTCGTCAGCCAGCAAGGTGTGTATAGGTCCACGAA
CACGAAGGTTTTCCAGTAAGAGGATGGGGGCTACTTGGTGAAAGGCCCCG
TTGTTTTTTGCGCGGCAACAATAAGGCAGAATAATAGGCTATAAAAAACA
CGATACGTTTCGGCCCTGGTGGCGTGTAGCGTACTTTTTTGTCCCGCCTC
CGTCCAACTGGCATGCTGCATCTTGTCTGATTCGTGACATTTTAGATGTA
GAGGCTAGAGCAGGCGCCACTCTTCGTCTGAAGCGAACTTTCTAGTCTTC
ATGGCGTTTTTCATGCGCTCTTGAAGAATGTTTTTTTTGTACCAACGCGT
TTGACACTACTGTGCAGATCGCAAACTAGCACGTGCGTCGTGTCCTACAA
ATTGGCTGCATTCACAACAGCAGGACCGTGTGTTCACAGCAGGGTTTCGT
TTCACCTTGCCCGCCTTTTCCTGTGCGCGGTACCTGGAAGACCTCACTAA
TGCAGATCATTCCGATCTCTCTGCTGCCTCCGCCCCGTTTCGCGTGTCTT
CGTTTGTTGCGCCTAATTTTCACCCGCGGGTTACTCCCTCATCCACTTGT
AGCAAGGGGTGCTGAATATCGTCGTGGGTAATCGAGGAACGTGGGTGCTC
AACAAGCAGTCACCTAACCGCCAGATTTGGTGGTCAAGTCCGATTAGGTG
GGTTTCTCTTGGGCTGCTTGTTCGCACTCAATCAATAGCAGCTCAAACGA
CATATCAGATTGAGATAAATTCCATCGCGCTGTACAAACTCGAGTTTGGT
GGCGCTAACCTCATCTTGCTGTTCCCACACTTGAACGGGAATGGGCAGCT
TGCGCGTATCATCGTATGAATGAACTACACCAGCGAGTGCGTCCAGATTC
GTGCAGGATGTATTCAGTCAAGCGAGCCAGTTCTGTATTCCAGTGCGTCA
ACTACGGCGTCATAGTTTCGATTTCTGACGGCTTGAGCGCATTATGCTTT
TGCGTGCAGCATACTCGCGCGTTCGTGTTTACTCACTGGTGGGGTCCCAA
ATTCGTGCAAAGCCGGCTCTCGCAAACTCCACAAAGGCACGAGTAGGTAT
GCCGATATGACATACACAAATTGAAGAACGACAAGTGACTTGGTTCGTTT
GGTCGCAGGGTGCAGTAGTTGCCATGCGTCTTCCAATGCTGGCCTCAATG
TTTAATGACTCGCCTCGAAGTGAACCCTCGCGCACCTTTTCCCCTCTGGT
GCATTCAATTCTCAGCGGGCCGATGCGCTTCGAATACCACGAAGACAGCA
AACGATGGTTGAATACCAGAGACGGCGAGACCGAGCTGCGGGTCATTTTG
GCGACCGAAATGAGCGAAAAGTGTGGCGTCTCTCTGTAAAGCATCTCGTC
GGCTTTGTCTGTAGCTTACAATGCGTATCATGGAGTAAATTGTCGTCTCC
TTGATCATAGAGGATTGTTAAACCGTTCCGGTTTTGCTACGTGAAGGCTT
GCGAGAGGCATTGGCGTGAGTGCCTCTTGTGGCGGCAACACTTCTCCCTC
ATACCGTATTTCACGGCAAAGTGGCGCTTCTGCTGTTGATACAATTCGAA
GTCATATTGCGTGCGCTTTGGTTGTGTGGCCGCGATCTCTTCGAGATTTC
TCACAATACTACCTTTGTCTGGACGTTGTTCTCGGAGTCGTGCAGCTGGT
CCGAGGGCTTGTGCGGGTCAGCATGTTGGCATTGGTTCGGGTATATTTGT
TGGTTAGACGAGTTGAACGATGAGGAAGAGGACACGACGCATCATTTCGG
AAAAACCTGCTTGGCCAGGATGCGCCGTGCAAGGTCGTTTTAGTCAGACT
GGGTGTGGTGGGAACCGAGTGCTACCTCTGTGCAGCAATGCCCCACCCTG
GCGAATGGAACTAAATGAGCATGAAAGCAGTTGGGAAGGTTCTGGCACTG
AGGGTGTCCACGATACCGGGTAATCACAAACGGTCGACCGTGTCACGGGA
GGAAGTAGCAGGACTTCAGAACATCCGAAAGTCTCCGAACCTCAGGCCGC
ACAGGAATGCAGAAATTGTTTGCAGCAACCGCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig160:297016..303548-

>mRNA_P-littoralis_Contig160.50.2 ID=mRNA_P-littoralis_Contig160.50.2|Name=mRNA_P-littoralis_Contig160.50.2|organism=Pylaiella littoralis U1_48|type=CDS|length=894bp|location=Sequence derived from alignment at P-littoralis_Contig160:297016..303548- (Pylaiella littoralis U1_48)
ATGCAGACTATGAGATCCTCGCGAGGCCTATCCCACCTGAATCGGCGGAA
GCACGCAGCTATGCTGACTAGTATGCGTGCACTCAGAGCTTGGACGACGA
CAAATACCAACAGATTAGCGATTCATGACCTACGTCACCAGCAGGCCCCT
GTTTCAACATCAACAACAGCAGCAGCAGCGGCGGCGGCGACGACAACATC
GTACTTCGGCGATGCCGTCCGACCGTCAACCACCGACAGGAGGACTACTC
AAGTCTCCTGCCCCTCGCTGGCTCGAGTGCCCTGGAAGTTGAGCGTCGAA
AGTCTATCGGGGTTGTGGCACGGTTGCGGCCATAACACGGATAGCTGTGG
CTTGAGTGGCGTCATTGGAACGGCTGCGCTGGTTCACAGCAGTAGCCGGA
GCATCCGTAGCGGCGATTTCGAGGCACGAGCGGCCGCTCTCGTTGGGGGC
ATCAGCATCGATTCAAGGTTGAGAGGAAATGAACCAGCATCAGTATTTCC
ATCAGTAGTACTTGCGAGGGGTCGTGCATCTGTGCCGAGGCGGGGAATGT
CCTCGTCCACCATATCTGAGCGAGAATTCCACTCCGTGGCAGACGAAGCC
CTGGAGGAAATCCACGACGCGGTGGAGGAGGCGCTGGAAGATGGCTTCGA
GGATGAGTTTGACTGCCACATGTCGCAAGGGGTGCTGAATATCGTCGTGG
GTAATCGAGGAACGTGGGTGCTCAACAAGCAGTCACCTAACCGCCAGATT
TGGTGGTCAAGTCCGATTAGCGGGCCGATGCGCTTCGAATACCACGAAGA
CAGCAAACGATGGTTGAATACCAGAGACGGCGAGACCGAGCTGCGGGTCA
TTTTGGCGACCGAAATGAGCGAAAAGTGTGGCGTCTCTCTGTAA
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