mRNA_P-littoralis_Contig160.24.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI) HSP 1 Score: 194 bits (493), Expect = 1.420e-56 Identity = 102/215 (47.44%), Postives = 145/215 (67.44%), Query Frame = 1
Query: 4 KRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 648
K+++ F+L+AL++ GS +V GR R ++PPN P+ D+T+ GG++ALTG Q+W++SSI P L PIF++ + YV+ +A VA R + N G+ AG VC AF DLI ACS SSF+VR+ SFT L L + + DQV+Q VMG ALG+ HKG+HI N+ G V+N N E+K+KQ K + S+SGRDN +H+W T ND +A++AL
Sbjct: 133 KKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQAL 346
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI) HSP 1 Score: 183 bits (465), Expect = 7.310e-54 Identity = 101/217 (46.54%), Postives = 144/217 (66.36%), Query Frame = 1
Query: 4 KRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVE--QAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 648
K+++ F+L+AL++ S +V GR R ++P N P+ D+T+ GG++ALTG Q+W++SSI P L PIF++ + YV+ +A VA R + N G+ AG VC AF DLI ACS SSF+VR+ SFT L L + + DQV+ Q VMG ALG+ HKG+HI N+ G V+N N E+K+KQ K + S+SGRDN +H+WRT ND +A++AL
Sbjct: 14 KKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIAPNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWRTTNDSLAMQAL 229
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.470e-51 Identity = 97/215 (45.12%), Postives = 140/215 (65.12%), Query Frame = 1
Query: 4 KRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 648
K+++ F+++AL+ GS +V R ++PPN P+ D+T+ GG+SALTG Q+W++SS P L PIF++ ++ YV+ + VA R + G+ AG VC AF DL+ ACS S F+VR+ SFT L L + + +QV+QA VMG ALGT HKG+HI N+ G V+N N E+K+K+ K + S+SGRDN +HIWR ND +A+KAL
Sbjct: 144 KKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDP-GTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKAL 357
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE) HSP 1 Score: 165 bits (417), Expect = 2.020e-44 Identity = 92/204 (45.10%), Postives = 133/204 (65.20%), Query Frame = 1
Query: 49 SALVSGR----LKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 648
SAL SG+ + ++ P +E + D+T+ GG SALTG Q+W++SSI+P L PIF++ ++ YV+ + VA R + G+ AG VC AF DL+ ACS S F+VR+ SFT L +L + +++QV+QA V+G ALGT HKG+HI N+ G V+N N E+K+K+ K + S+SGRDN +HIWR ND +A+KAL
Sbjct: 76 SALNSGKKIMGFVMDALDPAGSEIVPDITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEP-GTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKAL 278
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI) HSP 1 Score: 151 bits (382), Expect = 1.450e-39 Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 1
Query: 4 KRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNI 504
K+++ F+L+AL++ GS +V GR R ++PPN P+ D+T+ GG++ALTG Q+W++SSI P L PIF++ + YV+ +A VA R + N G+ AG VC AF DLI ACS SSF+VR+ SFT L L + + DQV+Q VMG ALG+ HKG+HI N+
Sbjct: 238 KKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNV 403
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE) HSP 1 Score: 141 bits (356), Expect = 3.430e-37 Identity = 82/215 (38.14%), Postives = 122/215 (56.74%), Query Frame = 1
Query: 4 KRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 648
K+++ FL++A + GS +V R R ++PPN P+ D+T I P L PIF++ ++ YV+ + VA R + + AG + VC F L+ ACS S F VR++S T +L + +++QV+QA V+G ALGT HKG+HI N+ G V+N N E+K+K+ K + S+SGRDN +HIWR ND A+KAL
Sbjct: 13 KKIVGFLMDARDPAGSEIVRARFAWRRMLPPNVSPIADIT-----------------HIFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEP-DTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIARNVVVNGDVTNCNVEEAKNKELKASAPSASGRDNARHIWRATNDSFAIKAL 209
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.430e-18 Identity = 67/219 (30.59%), Postives = 112/219 (51.14%), Query Frame = 1
Query: 7 RMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALG----TFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 648
++ + LL L+ G L+S K S+ PL D +DGGFSAL+G +W LSS+ L+FRP+ + SMK + G + +V V L+ A S ++ ++R+ SF + + + +R++V ++G+ G + H+G+H N D G +S+ + ES+HK K + ++SGRDN +HI R ND +A +A+
Sbjct: 593 KIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATT-DTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVS-LMSMLGDKHGGRLCSNHQGLHFAKNATDYGELSDCHAGESRHKSFKSCAKTASGRDNEEHIVRRENDAMAAEAM 809
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.150e-11 Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 4 KRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 213
K+++ F+++AL+ G+ +V R R ++PPN P+ D+T+ GG SALTG Q+W+++SI P L PIF++
Sbjct: 189 KKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSS 258
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE) HSP 1 Score: 69.3 bits (168), Expect = 3.950e-10 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 19 FLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFAN 213
F+++AL+ GS +V R R ++P N P+ D+T+ GG+SALTG Q+W++SSI P L P+F++
Sbjct: 608 FVMDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSS 672
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Match: A0A6H5LF20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF20_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.100e-9 Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 427 QVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGR--DNMKHIWRTYNDGVALKAL 648
QV+QA V G AL + HKG+HI D+IR+LGAV NTN ES HK KK + R +N HI + +ND ALK+L
Sbjct: 22 QVKQASRVAGLALNSIHKGLHIADDIRNLGAVGNTNAGESNHKDLKKSRRDACLRAGNNEVHIIKNWNDNQALKSL 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig160.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig160.24.1 >prot_P-littoralis_Contig160.24.1 ID=prot_P-littoralis_Contig160.24.1|Name=mRNA_P-littoralis_Contig160.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp MIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQback to top mRNA from alignment at P-littoralis_Contig160:192035..194210- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig160.24.1 ID=mRNA_P-littoralis_Contig160.24.1|Name=mRNA_P-littoralis_Contig160.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2176bp|location=Sequence derived from alignment at P-littoralis_Contig160:192035..194210- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig160:192035..194210- >mRNA_P-littoralis_Contig160.24.1 ID=mRNA_P-littoralis_Contig160.24.1|Name=mRNA_P-littoralis_Contig160.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=642bp|location=Sequence derived from alignment at P-littoralis_Contig160:192035..194210- (Pylaiella littoralis U1_48)back to top |