prot_P-littoralis_Contig16.234.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig16.234.1
Unique Nameprot_P-littoralis_Contig16.234.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length133
Homology
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 5.560e-59
Identity = 101/131 (77.10%), Postives = 111/131 (84.73%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSHGS TQ IVS SS E+EYI  GEGV+ ALFVR VLSFIAPETSGS+I+VLEDN+GA+AL+QNPL SGR+KHIDVRFHFIR LFRSG ISV  V T EQHADVLTKALSR   +YHR+ LMNLPE
Sbjct:  102 VGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYHRRKLMNLPE 232          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.280e-57
Identity = 99/131 (75.57%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SHGS TQ IVS SS E+EYI AGEGV+EALFVR VLSFIAPETSGS+I+VLEDN+GAMAL+QNPL S RSKHIDVR+HFIR LFRSG IS++ V T EQHADVLTKA S+   +YHR+ LMNLPE
Sbjct:  251 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKAHSKSSLQYHRRKLMNLPE 381          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5L267_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L267_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.360e-57
Identity = 96/131 (73.28%), Postives = 113/131 (86.26%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSHGS TQ IVS SS E+EYI AGEGV+EALFVR VLSF+APETSGS+I+VLEDN+GA+AL+QNPL SGR+KHIDVR+HFIR LF SG I+V+ V T+EQHAD+LTKALSR   +YHR+ L+N PE
Sbjct:   97 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFGSGDIAVKFVPTKEQHADLLTKALSRASLQYHRRKLINFPE 227          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 4.100e-57
Identity = 99/131 (75.57%), Postives = 113/131 (86.26%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSHGS TQ I+S SS E+EYI AGEGV+EALFVR VLSF+APETSGS+IKVLEDN+GA+AL+QNPL SGR+KHIDVR+HFI  LFRSG ISV+ V T EQHAD+LTKALSR   +YHR+ LMNLPE
Sbjct:  256 VGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKALSRANLQYHRRKLMNLPE 386          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KVG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG7_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 8.950e-57
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            +GG  VSH S +Q +V+ S+ E+EYI AGEGV+EALFVR VLSF+APETS ++I+V EDN+GAM L+QNPL S RSKHIDVRFHFIRELF+SG ISVE+V T+EQHAD+LTKAL R    YHRKALMNLPE
Sbjct:    8 LGGTAVSHTSKSQRVVALSTTEAEYIAAGEGVKEALFVRAVLSFVAPETSWASIQVREDNQGAMTLVQNPLSSARSKHIDVRFHFIRELFKSGRISVEYVSTDEQHADLLTKALCRVKLEYHRKALMNLPE 138          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KUQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ2_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 9.670e-57
Identity = 97/127 (76.38%), Postives = 108/127 (85.04%), Query Frame = 0
Query:    6 VVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VVSHGS TQ IVS SS  +EYI AGEGV+EALFVR VLSF+APET GS+I+VLEDN+GAMAL+QNPL SGR+KHIDVRFHFIR LFRSG ISV+ V T EQHAD+LTKALSR   +YHR  LMNLPE
Sbjct:   92 VVSHGSKTQSIVSLSSTVAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAMALVQNPLNSGRTKHIDVRFHFIRGLFRSGEISVKFVPTTEQHADLLTKALSRASLQYHRPKLMNLPE 218          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 4.060e-56
Identity = 99/131 (75.57%), Postives = 113/131 (86.26%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SHGS TQ IVS SS E+EYI AGEGV+EALFVR VLSFIAPETSGS+I+VLEDN+GAMAL+QNPL S RSKHIDVR+HFIR LFRSG IS++ V T EQHAD+LTKALS+   +YHR+ LMNLPE
Sbjct:  466 VGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 596          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 4.610e-56
Identity = 91/130 (70.00%), Postives = 107/130 (82.31%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLP 131
            VGG VV   + TQP+ + S+ E+EYI AGEGV+EALFVR VLSFIAPETSG+TI+V EDNEGA+AL+QNP  S RSKHIDVRFHFIRELF++G I+ ++V TEEQHAD+LTK L R    YHRKALMNLP
Sbjct:   82 VGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVLSFIAPETSGATIRVREDNEGALALVQNPFSSARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLP 211          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 3.120e-55
Identity = 97/131 (74.05%), Postives = 114/131 (87.02%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG V+SHGS+TQ IVS SS E+EYI AGEGV+EALFVR VLSF+ PETSGS+I+VL+DN+GA+AL+QNPL SGR+KHIDVR+HFIR LFRSG ISV+ V T EQHAD+LTKALSR   +YHR+ LMNLPE
Sbjct:  373 VGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVLSFVPPETSGSSIEVLDDNQGAIALVQNPLRSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 503          
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Match: A0A6H5JQH8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 6.230e-55
Identity = 95/131 (72.52%), Postives = 109/131 (83.21%), Query Frame = 0
Query:    2 VGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPETSGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEHVRTEEQHADVLTKALSRDLFRYHRKALMNLPE 132
            VGG VVSHGS TQ IVS SS E+EYI AGEGV+EALFVR VLSF+APE SGS+I+VLE N+GA+AL+QNPL SGR+KHIDVRFHFIR LFR G I+V+ V T EQHAD+LTK LSR   +YHR+ LM LPE
Sbjct:  122 VGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRDVLSFVAPEPSGSSIQVLEGNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRPGDIAVKFVPTTEQHADLLTKGLSRASLQYHRRKLMILPE 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJM0_9PHAE5.560e-5977.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L589_9PHAE1.280e-5775.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L267_9PHAE2.360e-5773.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGI0_9PHAE4.100e-5775.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVG7_9PHAE8.950e-5770.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUQ2_9PHAE9.670e-5776.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGX6_9PHAE4.060e-5675.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KR64_9PHAE4.610e-5670.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ05_9PHAE3.120e-5574.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQH8_9PHAE6.230e-5572.52Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 55..127
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 55..127
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..118
e-value: 1.19559E-45
score: 142.992

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:1015043..1015441 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.234.1mRNA_P-littoralis_Contig16.234.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig16 1014979..1015477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig16.234.1 ID=prot_P-littoralis_Contig16.234.1|Name=mRNA_P-littoralis_Contig16.234.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=133bp
MVGGAVVSHGSSTQPIVSNSSAESEYIVAGEGVREALFVRHVLSFIAPET
SGSTIKVLEDNEGAMALIQNPLISGRSKHIDVRFHFIRELFRSGVISVEH
VRTEEQHADVLTKALSRDLFRYHRKALMNLPE*
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