prot_P-littoralis_Contig16.197.5 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE) HSP 1 Score: 195 bits (495), Expect = 4.050e-46 Identity = 129/236 (54.66%), Postives = 149/236 (63.14%), Query Frame = 0
Query: 1235 PGSGQGLVVSRGVSVKADVHVPSATVAVARGGELAGRVVAREFLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVESEHQPGGGL-------ERELKHAMVEGSIPTAAARGGPVNDPVGRGEEPRAVGGXXXXXSDRPIASE------GYELVVRSPELASNR--EIETATATAASNNRGAPQTGEEAS 1455
P S QGLVVSRGVSV ADVHVP ATVAV RGG+L GR+VA+EFLLEDGGR+EGEVEC FAVIEG L+ASL+SKEMATVGPSA INGDVIYNVLELDRGA+ITGRLFSI P+ + A S P GGL E E K +E + A A G P AVGG DR I + GYE V+ + E AS R ++ T ++N AP GE++S
Sbjct: 1994 PESEQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDGGRVEGEVECHFAVIEGSLEASLVSKEMATVGPSASINGDVIYNVLELDRGAIITGRLFSI----RPSTADASSSSCPVPWGGLVSRPWQQEEEAKQLRLERELRLAMAEDG---------AGPGAVGGGSVRGDDRSIPKDTAANEDGYEPVIMNSEWASTRGSPVDPNLLTQSANRTPAPVGGEQSS 2216
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.140e-42 Identity = 101/135 (74.81%), Postives = 110/135 (81.48%), Query Frame = 0
Query: 1235 PGSGQGLVVSRGVSVKADVHVPSATVAVARGGELAGRVVAREFLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVESEHQPGGGLEREL 1369
P S QGLVVSRGVSV ADVHVP ATVAV RGG+L GR+VA+EFLLEDGGR+EGEVECDFAVIEG L+ASL+SKEMATVGPSA INGDVIYNVLELDRGA+ITGRLFSI S + + S V P GG R L
Sbjct: 1457 PESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDGGRVEGEVECDFAVIEGSLEASLVSKEMATVGPSASINGDVIYNVLELDRGAIITGRLFSIRSTTADSSSSCSV-----PWGGAPRPL 1586
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0R0E290_9GAMM (Cell shape determination protein CcmA n=2 Tax=Stenotrophomonas TaxID=40323 RepID=A0A0R0E290_9GAMM) HSP 1 Score: 65.9 bits (159), Expect = 9.930e-9 Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLAS-PAPSVARVES 1357
G + G+VVA + L + G +EGEV V+ G LD + + E + P+AR+NG+V Y V+E+ GA + GRL G++A+ PAP S
Sbjct: 38 GRIEGKVVAEDGARATLTLAEQGHIEGEVRASVVVVSGSLDGDVHADERVELAPTARVNGNVHYQVVEMSAGAQLNGRLLHAGTMAALPAPQAVAAAS 135
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0K2ZXR8_XANCT (Uncharacterized protein n=16 Tax=Xanthomonas TaxID=338 RepID=A0A0K2ZXR8_XANCT) HSP 1 Score: 64.3 bits (155), Expect = 4.680e-8 Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP 1350
G + G+V+A + L + G +EGEV +I G L + + E + P AR+ G+V Y V+E++ GA +TGRL +GS+A+ AP
Sbjct: 40 GRILGKVLAEDGAPATLTLSEHGSIEGEVRAPIVIINGQLTGDVHAAERVELAPKARVQGNVHYQVVEMNAGAQLTGRLIHVGSMAALAP 129
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: UPI00197CEB71 (polymer-forming cytoskeletal protein n=1 Tax=Xanthomonas sp. AmX2 TaxID=2810352 RepID=UPI00197CEB71) HSP 1 Score: 63.9 bits (154), Expect = 6.230e-8 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP-SVARVESEHQP 1361
G + G+VVA + L + G +EGEV VI G L + + E + P AR+ G+V Y V+E++ GA +TGRL GS+A+ AP AR + + +P
Sbjct: 39 GRILGKVVAEDGAAATLTLSEHGSIEGEVRAPIVVINGQLIGDVHAGERVELAPKARVQGNVHYQVVEMNAGAQLTGRLIHTGSMAALAPPEPAREDPQAEP 140
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: D2UBA8_XANAP (Uncharacterized protein n=6 Tax=Xanthomonas TaxID=338 RepID=D2UBA8_XANAP) HSP 1 Score: 63.2 bits (152), Expect = 1.180e-7 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP 1350
G + G+V+A E L + G +EGEV VI G L + + E + P AR+ G+V Y V+E++ GA +TGRL GS+A+ AP
Sbjct: 38 GRILGKVMAEEGVPAMLTLSEHGTIEGEVRAPVVVINGQLIGDVHATERVELAPKARVQGNVHYQVVEMNAGAQLTGRLIHAGSIAALAP 127
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0A8DW61_9XANT (Cell shape determination protein CcmA n=10 Tax=Xanthomonas TaxID=338 RepID=A0A0A8DW61_9XANT) HSP 1 Score: 62.0 bits (149), Expect = 2.840e-7 Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVES 1357
G + G+VVA + L + G +EGEV +I G L + + E + AR+ G+V Y V+E++ GA +TGRL GSLA+ AP A E+
Sbjct: 39 GRILGKVVAEDGAPATLTLSEHGSIEGEVRAPVVIINGQLIGDVHAAERVELASKARVQGNVHYQVVEMNAGAQLTGRLIHAGSLAALAPPEAHREA 135
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0R0CL58_9GAMM (Cell shape determination protein CcmA n=1 Tax=Stenotrophomonas humi TaxID=405444 RepID=A0A0R0CL58_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 4.790e-7 Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLAS-PAP 1350
G + G+VVA E L + G +EGE+ V+ G +D + + E + PSAR+NG+V Y V+E++ GA + GRL ++A+ PAP
Sbjct: 38 GRILGKVVAAEGSEAMLTLAEQGHIEGEIRAAVVVLSGRMDGDVHATERVELTPSARVNGNVHYQVVEMNAGAQLNGRLVHTATMAALPAP 128
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0S1B3B1_9GAMM (Cell shape determination protein CcmA n=11 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A0S1B3B1_9GAMM) HSP 1 Score: 60.8 bits (146), Expect = 6.080e-7 Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLAS-PAPSVARVESE 1358
G + GRV+A E L + G ++GEV V+ G +D + + E + P+AR+NG+V Y V+E+ GA + GRL ++A+ P+P A ++ +
Sbjct: 38 GRIEGRVIAEEGAKAVLTLAEQGHIDGEVRASVVVLSGRMDGDVHAGERIELTPTARVNGNVHYQVVEMGAGAQLNGRLVHATAMAALPSPEAAALQEQ 136
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0D0HYU2_STEMA (Cell shape determination protein CcmA n=13 Tax=Stenotrophomonas TaxID=40323 RepID=A0A0D0HYU2_STEMA) HSP 1 Score: 61.2 bits (147), Expect = 6.170e-7 Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 0
Query: 1266 GELAGRVVARE------FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVESEHQPGGG---LERELKHAMV 1374
G + G+V+A+E L D G +EGE+ VI G +D + + E + PSAR+NG+V Y V+E+ GA + GRL + + P E G G R+L AM
Sbjct: 39 GRIHGKVIAQEGASNANITLADNGVVEGEIRAQVVVISGRMDGDVHASERVELTPSARVNGNVHYQVVEMAAGAQLNGRLIHASAPMAALPPPEGAADEAGTGKGDTAARRKLAEAMA 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig16.197.5 ID=prot_P-littoralis_Contig16.197.5|Name=mRNA_P-littoralis_Contig16.197.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1685bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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