prot_P-littoralis_Contig16.197.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig16.197.5
Unique Nameprot_P-littoralis_Contig16.197.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1685
Homology
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 4.050e-46
Identity = 129/236 (54.66%), Postives = 149/236 (63.14%), Query Frame = 0
Query: 1235 PGSGQGLVVSRGVSVKADVHVPSATVAVARGGELAGRVVAREFLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVESEHQPGGGL-------ERELKHAMVEGSIPTAAARGGPVNDPVGRGEEPRAVGGXXXXXSDRPIASE------GYELVVRSPELASNR--EIETATATAASNNRGAPQTGEEAS 1455
            P S QGLVVSRGVSV ADVHVP ATVAV RGG+L GR+VA+EFLLEDGGR+EGEVEC FAVIEG L+ASL+SKEMATVGPSA INGDVIYNVLELDRGA+ITGRLFSI     P+ + A   S   P GGL       E E K   +E  +  A A  G           P AVGG      DR I  +      GYE V+ + E AS R   ++    T ++N   AP  GE++S
Sbjct: 1994 PESEQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDGGRVEGEVECHFAVIEGSLEASLVSKEMATVGPSASINGDVIYNVLELDRGAIITGRLFSI----RPSTADASSSSCPVPWGGLVSRPWQQEEEAKQLRLERELRLAMAEDG---------AGPGAVGGGSVRGDDRSIPKDTAANEDGYEPVIMNSEWASTRGSPVDPNLLTQSANRTPAPVGGEQSS 2216          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.140e-42
Identity = 101/135 (74.81%), Postives = 110/135 (81.48%), Query Frame = 0
Query: 1235 PGSGQGLVVSRGVSVKADVHVPSATVAVARGGELAGRVVAREFLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVESEHQPGGGLEREL 1369
            P S QGLVVSRGVSV ADVHVP ATVAV RGG+L GR+VA+EFLLEDGGR+EGEVECDFAVIEG L+ASL+SKEMATVGPSA INGDVIYNVLELDRGA+ITGRLFSI S  + + S   V     P GG  R L
Sbjct: 1457 PESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLEDGGRVEGEVECDFAVIEGSLEASLVSKEMATVGPSASINGDVIYNVLELDRGAIITGRLFSIRSTTADSSSSCSV-----PWGGAPRPL 1586          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0R0E290_9GAMM (Cell shape determination protein CcmA n=2 Tax=Stenotrophomonas TaxID=40323 RepID=A0A0R0E290_9GAMM)

HSP 1 Score: 65.9 bits (159), Expect = 9.930e-9
Identity = 36/98 (36.73%), Postives = 54/98 (55.10%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLAS-PAPSVARVES 1357
            G + G+VVA +       L + G +EGEV     V+ G LD  + + E   + P+AR+NG+V Y V+E+  GA + GRL   G++A+ PAP      S
Sbjct:   38 GRIEGKVVAEDGARATLTLAEQGHIEGEVRASVVVVSGSLDGDVHADERVELAPTARVNGNVHYQVVEMSAGAQLNGRLLHAGTMAALPAPQAVAAAS 135          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0K2ZXR8_XANCT (Uncharacterized protein n=16 Tax=Xanthomonas TaxID=338 RepID=A0A0K2ZXR8_XANCT)

HSP 1 Score: 64.3 bits (155), Expect = 4.680e-8
Identity = 33/90 (36.67%), Postives = 52/90 (57.78%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP 1350
            G + G+V+A +       L + G +EGEV     +I G L   + + E   + P AR+ G+V Y V+E++ GA +TGRL  +GS+A+ AP
Sbjct:   40 GRILGKVLAEDGAPATLTLSEHGSIEGEVRAPIVIINGQLTGDVHAAERVELAPKARVQGNVHYQVVEMNAGAQLTGRLIHVGSMAALAP 129          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: UPI00197CEB71 (polymer-forming cytoskeletal protein n=1 Tax=Xanthomonas sp. AmX2 TaxID=2810352 RepID=UPI00197CEB71)

HSP 1 Score: 63.9 bits (154), Expect = 6.230e-8
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP-SVARVESEHQP 1361
            G + G+VVA +       L + G +EGEV     VI G L   + + E   + P AR+ G+V Y V+E++ GA +TGRL   GS+A+ AP   AR + + +P
Sbjct:   39 GRILGKVVAEDGAAATLTLSEHGSIEGEVRAPIVVINGQLIGDVHAGERVELAPKARVQGNVHYQVVEMNAGAQLTGRLIHTGSMAALAPPEPAREDPQAEP 140          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: D2UBA8_XANAP (Uncharacterized protein n=6 Tax=Xanthomonas TaxID=338 RepID=D2UBA8_XANAP)

HSP 1 Score: 63.2 bits (152), Expect = 1.180e-7
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP 1350
            G + G+V+A E       L + G +EGEV     VI G L   + + E   + P AR+ G+V Y V+E++ GA +TGRL   GS+A+ AP
Sbjct:   38 GRILGKVMAEEGVPAMLTLSEHGTIEGEVRAPVVVINGQLIGDVHATERVELAPKARVQGNVHYQVVEMNAGAQLTGRLIHAGSIAALAP 127          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0A8DW61_9XANT (Cell shape determination protein CcmA n=10 Tax=Xanthomonas TaxID=338 RepID=A0A0A8DW61_9XANT)

HSP 1 Score: 62.0 bits (149), Expect = 2.840e-7
Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVES 1357
            G + G+VVA +       L + G +EGEV     +I G L   + + E   +   AR+ G+V Y V+E++ GA +TGRL   GSLA+ AP  A  E+
Sbjct:   39 GRILGKVVAEDGAPATLTLSEHGSIEGEVRAPVVIINGQLIGDVHAAERVELASKARVQGNVHYQVVEMNAGAQLTGRLIHAGSLAALAPPEAHREA 135          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0R0CL58_9GAMM (Cell shape determination protein CcmA n=1 Tax=Stenotrophomonas humi TaxID=405444 RepID=A0A0R0CL58_9GAMM)

HSP 1 Score: 61.2 bits (147), Expect = 4.790e-7
Identity = 34/91 (37.36%), Postives = 53/91 (58.24%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLAS-PAP 1350
            G + G+VVA E       L + G +EGE+     V+ G +D  + + E   + PSAR+NG+V Y V+E++ GA + GRL    ++A+ PAP
Sbjct:   38 GRILGKVVAAEGSEAMLTLAEQGHIEGEIRAAVVVLSGRMDGDVHATERVELTPSARVNGNVHYQVVEMNAGAQLNGRLVHTATMAALPAP 128          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0S1B3B1_9GAMM (Cell shape determination protein CcmA n=11 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A0S1B3B1_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 6.080e-7
Identity = 33/99 (33.33%), Postives = 56/99 (56.57%), Query Frame = 0
Query: 1266 GELAGRVVARE-----FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLAS-PAPSVARVESE 1358
            G + GRV+A E       L + G ++GEV     V+ G +D  + + E   + P+AR+NG+V Y V+E+  GA + GRL    ++A+ P+P  A ++ +
Sbjct:   38 GRIEGRVIAEEGAKAVLTLAEQGHIDGEVRASVVVLSGRMDGDVHAGERIELTPTARVNGNVHYQVVEMGAGAQLNGRLVHATAMAALPSPEAAALQEQ 136          
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Match: A0A0D0HYU2_STEMA (Cell shape determination protein CcmA n=13 Tax=Stenotrophomonas TaxID=40323 RepID=A0A0D0HYU2_STEMA)

HSP 1 Score: 61.2 bits (147), Expect = 6.170e-7
Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 0
Query: 1266 GELAGRVVARE------FLLEDGGRLEGEVECDFAVIEGVLDASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAPSVARVESEHQPGGG---LERELKHAMV 1374
            G + G+V+A+E        L D G +EGE+     VI G +D  + + E   + PSAR+NG+V Y V+E+  GA + GRL    +  +  P       E   G G     R+L  AM 
Sbjct:   39 GRIHGKVIAQEGASNANITLADNGVVEGEIRAQVVVISGRMDGDVHASERVELTPSARVNGNVHYQVVEMAAGAQLNGRLIHASAPMAALPPPEGAADEAGTGKGDTAARRKLAEAMA 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.197.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JGI3_9PHAE4.050e-4654.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJC8_ECTSI1.140e-4274.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0R0E290_9GAMM9.930e-936.73Cell shape determination protein CcmA n=2 Tax=Sten... [more]
A0A0K2ZXR8_XANCT4.680e-836.67Uncharacterized protein n=16 Tax=Xanthomonas TaxID... [more]
UPI00197CEB716.230e-837.25polymer-forming cytoskeletal protein n=1 Tax=Xanth... [more]
D2UBA8_XANAP1.180e-738.89Uncharacterized protein n=6 Tax=Xanthomonas TaxID=... [more]
A0A0A8DW61_9XANT2.840e-737.11Cell shape determination protein CcmA n=10 Tax=Xan... [more]
A0A0R0CL58_9GAMM4.790e-737.36Cell shape determination protein CcmA n=1 Tax=Sten... [more]
A0A0S1B3B1_9GAMM6.080e-733.33Cell shape determination protein CcmA n=11 Tax=Xan... [more]
A0A0D0HYU2_STEMA6.170e-733.05Cell shape determination protein CcmA n=13 Tax=Ste... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..354
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availableCOILSCoilCoilcoord: 916..936
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1131..1195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1076..1099
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 982..1110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1488..1546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1619..1662
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1430..1457
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..652
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1381..1462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..869
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 786..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..516
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..764
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 898..913
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1012..1028
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 982..1005
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1619..1633
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 888..965
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1135..1165
NoneNo IPR availablePANTHERPTHR23216NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 136..805
coord: 577..1154
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 1242..1339
e-value: 7.0E-11
score: 42.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:766985..786471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.197.5mRNA_P-littoralis_Contig16.197.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig16 765977..789132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig16.197.5 ID=prot_P-littoralis_Contig16.197.5|Name=mRNA_P-littoralis_Contig16.197.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1685bp
MMFRHLRRGSRTLADSFSNDGRALTEIVESNSVAVNGSAGFAAAAVSGAG
AGAGNIAVVYTVPTGLAKPPPALSVENVRQKRHRRYEPEAGGEEDCSISS
PLQGFPVATTTRAAAAFKEASVVAKAGAAATAKAIAAARWKYARKRSASS
AVTVQPGDKVGEEEKEKYRRKRPPTAAGAAAAAAAATTGLPDVDVTPLCM
PLKAARHGKADRGHGEGPPLPLQPPARPLSLKQLQRRRSAAAVAAARCGS
SGGIGGRGTVFSLGSSPSAAAAAAAAAAAASKAMPKLLEEREKEEDEDGL
VASSPFSSSQGAESMSSAAAAAAAAAAAVEEEEEEQEQEEGEEVEEEAEE
EGRSVGDHSQNQNQNQNQKLAIVAVTSFEIREALGAEGFEVVHSPVSRAG
QMAVLQLSAGSVRRRRKAKALAASPAQKGEGGDALVVGAGAGVGVGGTGT
PTFFPTKRRTASSRGAGGESHDDPGRQQGLLLLSCSSSAASLEDVGGGRD
DDDDDNDGGGGGGGGGRCVVGRGVEATAPAAVSAANGGGVAAAGAAAAAA
VAGGGGSDELGVADDKVSALLSSAQRPPAPAPVGTAPAPAVRGQAWTAYA
SPSYVTISNSSSSSSGNTSLSSGSSASPPFANNSSSSSSSSNSSTSGAKT
NTGGGGGGDGGDNGSGGGGDGGGRGGGCGGSGGGGGGGGGGGGSGSGGGG
GCGGGGSFFCETGDVDADKEEEEEGEEGERRESLQSLHLEAENMAEAVLE
EFTVDDEEDHEGSGDAWKEDEGSQTHTRTHAHTRTHTHTTPPPTHTQVSS
KRRSSWEAFTFSEGVFRKAAARTGGGDGNHGGRRGNDGSGADDSNNSRWE
GEGVAVLPPPGICLVDQAKELDARRKYELSVCESALAKDRKKIDSSNASH
SRSSSSSGSGSGSAAAAEEEAEAEAGQEVAEAAEAAEAEVEAEAGQEASK
GTVDDPYGSALPDLPSAAAAAAPRICSAAASAATAPSSSYSSPPSPSSSF
SPSSAKVAVAMLPPPAPAPAPAPAPAPASAVPLLGGTSRTAEAAAEVGRG
RGCDVVSPASGRGDGDGVGDGGDGVGGVSTTTSSGSSSSRSSSGSGGGSG
GGNRYAASSAEPPKLFDLDLDLDLELARRRHAMMMTTTTRGSGSSSGSGS
GSGSGSGSGSGSGSGLHRSAAYRPRGGPSSPSGCGDGGAGVGMEPGKDDA
SAVAAAAAVEAVEAVAAAATESVGLAGGTGGRYQPGSGQGLVVSRGVSVK
ADVHVPSATVAVARGGELAGRVVAREFLLEDGGRLEGEVECDFAVIEGVL
DASLISKEMATVGPSARINGDVIYNVLELDRGAVITGRLFSIGSLASPAP
SVARVESEHQPGGGLERELKHAMVEGSIPTAAARGGPVNDPVGRGEEPRA
VGGGGGGGSDRPIASEGYELVVRSPELASNREIETATATAASNNRGAPQT
GEEASEGGRSTGSAAVMAAAAAAAAAGGGHHADECGDGGAFAGTAQRSGE
PMTGGAEESAGGGGIIDGQSAVTVPLPRDAPERSEEDGFSSGADAGGAVA
GAGAGADAGAGGAGGAGGGADGDDADDYGSNAGAFQRPSLRTFSSLWGSV
SNTVMEGVLWVSGTPSDADGDVSASSRHSSSRGGGGGSGGDGVSIASGSV
AETSVIAEDECEEDSSQKIRRVWITAAERRAQIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B