mRNA_P-littoralis_Contig16.172.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig16.172.3
Unique Name	mRNA_P-littoralis_Contig16.172.3
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.900e-39
Identity = 75/140 (53.57%), Postives = 95/140 (67.86%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            +H  D EE +CF R  RMP   FEKL ELL P L  N H   +RT +G ISV IR+AVA+R+LAG SY+D+A++FG+ +P V   +W  IDAIN TP VG F+F QTE +C   A ++K  STNG+F   VA VDGLFV+
Sbjct:   72 EHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVK 211

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.720e-38
Identity = 75/140 (53.57%), Postives = 94/140 (67.14%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            +H+ D      F R  RM   +F+KL ELLRP LERN +   +RT SG + V IR+AVA+RM AG SYID+ALLFG+A   V  +MWQ +DAIN TP VGPF+F QT +EC + A +W+  ST G F   VAA DGLFV+
Sbjct:   73 EHVKDVRRRKLFRRMYRMEEHSFDKLAELLRPILERNDYSARLRTSSGAVPVKIRLAVALRMFAGASYIDVALLFGIAKESVFNVMWQVVDAINNTPTVGPFFFPQTVEECTRQAREWEVKSTGGAFAGCVAAGDGLFVK 212

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 2.830e-37
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            +H+ D +    F R  RM   +F KL ELLRP LE N      RT+SG + V IR+AVA+RMLAG SY+D+A+LFG+A   V  ++W+ +DAIN TP VG F+F QT D+CA+ A +W+  ST GVF   VAA DGLFV+
Sbjct:   74 EHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVLFGIAKETVFHVLWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVK 213

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5JMM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM2_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 3.050e-36
Identity = 70/140 (50.00%), Postives = 91/140 (65.00%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            +H+ D +    F R  RM   +F KL +LLRP LE N      RT SG + V I +AVA+RMLAG SY+D+A+LFG+A   V   +W+ +DAIN TP VG F+F QT D+CA+ A +W+  ST GVF   VAA DGLFV+
Sbjct:   74 EHVRDIKRRGVFRRMYRMEEHSFNKLAQLLRPFLESNDFYARKRTGSGAVPVKISLAVALRMLAGASYLDVAVLFGIAKETVFHALWEVVDAINNTPEVGAFFFPQTRDDCARQAKEWEAKSTGGVFSGCVAAGDGLFVK 213

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5KUP3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP3_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 4.420e-35
Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 3

Query:  399 ADHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTK-SGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVRCK 827
            A H  D ++     R  RM   +F KLVELLRPSL  NA    +R+  +G I+V +RVAVA+R+LAG  Y D+AL+FG+++P    I+W  IDAINKTPAVG F F  TE+ C + A ++K  ST+G+F  VVAAVDGLF++ K
Sbjct:   28 AQHEADLDKRQGRRRSYRMEKASFHKLVELLRPSLAVNAFFGALRSPINGAIAVEVRVAVALRILAGARYWDVALMFGLSVPTTYQILWSVIDAINKTPAVGAFDFPLTEEGCMRNANRFKKKSTDGIFSWVVAAVDGLFIKAK 171

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5KBP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP1_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.050e-34
Identity = 72/144 (50.00%), Postives = 100/144 (69.44%), Query Frame = 3

Query:  399 ADHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKS-GVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVRCK 827
            A H  D ++ + + R  RM   +F KLVELLRPSLE NA    +R+ + G I+V +RVA A+R+LAGGSY D+AL+FG++  +   I+WQ IDAIN+TPA+G F F  TE+ C + A ++K  ST+G+F  VVAAVD LF++ K
Sbjct:  115 AQHEADLDKRHGWRRSYRMEKGSFHKLVELLRPSLEVNAFFGALRSPTNGAIAVEVRVAAALRILAGGSYWDVALMFGLSRAVTFDILWQVIDAINETPAIGAFDFPLTEEGCMRNANRFKEKSTDGIFSWVVAAVDCLFIKAK 258

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5KEZ6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ6_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 3.280e-34
Identity = 67/140 (47.86%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            DH  D ++   F R  RM    F KL  LL P L+RN +    R + G +   IR+A+ +RM+AG SY+D+A+LFGV+   V  I+WQ +DAIN T  VGPF+F Q+EDEC + A +W+  ST G F  VVAA DGLFV+
Sbjct:   79 DHAADLKKRKLFRRMYRMEEPVFNKLAGLLEPILQRNDYDARKRYRRGAVPTKIRLAIGLRMMAGASYLDVAVLFGVSKETVFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVK 218

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5KPH6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH6_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.450e-33
Identity = 67/140 (47.86%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            DH  D ++   F R  RM    F KL  LL P L+RN +    R + G +   IR+A+ +RM+AG SY+D+A+LFGV+   V  I+WQ +DAIN T  VGPF+F Q+EDEC + A +W+  ST G F  VVAA DGLFV+
Sbjct:   44 DHAADLKKRKLFRRMYRMEEPVFNKLAGLLEPILQRNDYYARKRYRRGAVPTKIRLAIGLRMMAGASYLDVAVLFGVSKETVFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVK 183

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.640e-33
Identity = 68/140 (48.57%), Postives = 91/140 (65.00%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            +H+ D      F R  RM    F+KL +LLRP LERN      RT+ G + V  R+AVA+R+LAG SY+D+A+LFG+A   V  ++W+ +DAIN TP VGPF+F QT +ECA+ A +W+  ST G     VAA DGLFV+
Sbjct:   76 EHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYARKRTRHGAVPVKHRLAVALRILAGASYMDVAVLFGIAKETVFHVLWEVVDAINNTPEVGPFFFPQTVEECARQAKEWEAKSTGGAISGCVAAGDGLFVK 215

[Close]

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Match: A0A6H5JXA4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA4_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 4.960e-33
Identity = 66/140 (47.14%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  402 DHLTDCEEHNCFSRYNRMPVETFEKLVELLRPSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPIVLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVVAAVDGLFVR 821
            DH  D ++   F R  R+    F KL  LL P L+RN +    R + G +   IR+A+ +RM+AG SY+D+A+LFGV+   V  I+WQ +DAIN T  VGPF+F Q+EDEC + A +W+  ST G F  VVAA DGLFV+
Sbjct:   77 DHAADLKKRKLFRRMYRIEEPVFNKLAGLLEPILQRNDYYARKRYRRGAVPTKIRLAIGLRMMAGASYLDVAVLFGVSKETVFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVK 216

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig16.172.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L386_9PHAE	1.900e-39	53.57	DDE Tnp4 domain-containing protein (Fragment) n=1 ...	[more]
A0A6H5JDE6_9PHAE	2.720e-38	53.57	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JHK3_9PHAE	2.830e-37	51.43	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JMM2_9PHAE	3.050e-36	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KUP3_9PHAE	4.420e-35	50.69	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5KBP1_9PHAE	3.050e-34	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KEZ6_9PHAE	3.280e-34	47.86	DDE Tnp4 domain-containing protein (Fragment) n=1 ...	[more]
A0A6H5KPH6_9PHAE	1.450e-33	47.86	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]
A0A6H5JUE6_9PHAE	1.640e-33	48.57	DDE Tnp4 domain-containing protein n=3 Tax=Ectocar...	[more]
A0A6H5JXA4_9PHAE	4.960e-33	47.14	DDE Tnp4 domain-containing protein n=1 Tax=Ectocar...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig16	contig	P-littoralis_Contig16:681926..686197 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	1
Seed ortholog	227086.JGI_V11_82035
PFAMs	DDE_Tnp_4
Model size	874
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	3
Evalue	8.43e-08
EggNOG OGs	2E3PU@1\|root,2SAQU@2759\|Eukaryota
Description	DDE superfamily endonuclease
Cds size	528
COG category	S

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789769.5808618-UTR-P-littoralis_Contig16:681925..682269	1680789769.5808618-UTR-P-littoralis_Contig16:681925..682269	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig16 681926..682269 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789769.5972435-CDS-P-littoralis_Contig16:682269..682450	1680789769.5972435-CDS-P-littoralis_Contig16:682269..682450	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig16 682270..682450 +
1680789769.6062374-CDS-P-littoralis_Contig16:684946..685179	1680789769.6062374-CDS-P-littoralis_Contig16:684946..685179	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig16 684947..685179 +
1680789769.6174088-CDS-P-littoralis_Contig16:686083..686197	1680789769.6174088-CDS-P-littoralis_Contig16:686083..686197	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig16 686084..686197 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig16.172.3	prot_P-littoralis_Contig16.172.3	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig16 682270..686197 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig16:681926..686197+
coding sequence from alignment at P-littoralis_Contig16:681926..686197+

protein sequence of mRNA_P-littoralis_Contig16.172.3

>prot_P-littoralis_Contig16.172.3 ID=prot_P-littoralis_Contig16.172.3|Name=mRNA_P-littoralis_Contig16.172.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=176bp
MLPRSGNRSTSPGVYHALADHLTDCEEHNCFSRYNRMPVETFEKLVELLR
PSLERNAHMTCVRTKSGVISVHIRVAVAIRMLAGGSYIDIALLFGVAIPI
VLLIMWQAIDAINKTPAVGPFYFQQTEDECAQAAGKWKGLSTNGVFDHVV
AAVDGLFVRCKKVDGVKPSEGSAKTG

mRNA from alignment at P-littoralis_Contig16:681926..686197+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig16.172.3 ID=mRNA_P-littoralis_Contig16.172.3|Name=mRNA_P-littoralis_Contig16.172.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4272bp|location=Sequence derived from alignment at P-littoralis_Contig16:681926..686197+ (Pylaiella littoralis U1_48)
TCGAAATTGAATTCTTCGAAATGATTTCGAAGGATTCAATTTCGAAATTT
CGAAATTGCGAAGTAGAGGGCGCACACGAAACAACGCATCTGCCGCACAA
CCCCACAGAACTTCCAGCAGCTCGAGCAATTTCGCCCGTGCCGGCGCTCA
ACTCAGCTACAGAAGTTTAACCAGGGGCATCGCTCGGCTCCTGTGAATCA
TGGTCGAGACTTGGAAGCGCCGGCGCTCGCTGGGGCCTGGATCGGAACCT
TCAAGGAGGCGACGCAACAGCTTGATCATTTCTGCTCTCACAGCTGTAGT
CGTTGCTGCTGTCGCTGTTGCAAGCGGAGTGGCATACACCGCCCATGCTC
CCAAGATCAGGCAACAGATCCACGAGCCCCGGCGTCTATCATGCATTAGC
GGATCACTTGACCGACTGCGAGGAGCATAACTGCTTCTCGCGCTACAACA
GGATGCCGGTCGAGACTTTCGAGAAGCTTGTCGAGCTGCTTCGCCCTTCC
TTGGAAAGGAACGCACACATGACATGTGAGAGAGTCACTGCTGGTTTTTT
GGTTGCACATTTAATTTTCTCTCAGGGACAACAGCAGCAGTAGTGCACAC
ATACTTCGAAGTACACGGTCATGCTGTACTGCAGCGCAGCCAAACAGCCG
CACCAGTCGAACATCAAAACGCACGCGTACGCACATATTTAGCATCAGCT
ATACTTGAAAGCACAGCGCAACAGGACATACTTCACAAACTTTTTTCCTG
GTTGTATATACTGTATAATACGAAGATTTTCGTTTTGTCACTGCTGTACA
CTCTGTAAACGGGCTGTCTCCTCCTACATGTGATACACACCGACACTTCG
TGTGTGAAAACCGCCACCTCTTCAGTTGTTTTTTGTGCGCGTGAGAATGA
CGAGCACAGCAGTAGCAGCAGCAGAAAGGCGTAAACACATATGTACTTCG
AGTATACTCCGGAGTATATCATATCAGCGGCAAAAATAGAGAAACACACG
TACATCAAATCTTGACGTACTCGCACACAAGCTTTTTTATTCATAGCAAG
GTACACGACATGTTTAGGGCGACATCATCACCAGCGTCGCAAGGACGGCA
TGGAGACACCATCCTCGACAATATCTGATGATACGTGTGTGTTTTTGTGT
TTTTTCTTTTTCTGTCTTCTCCGATTACCGGGGCTACTTGTACGTTGGAG
GCAGCACTCCAGACAGCATCTAACTGCTGTAGTCTGCAGCTACCTACTGA
CTGCTTGTAGCAGCAGCGGTTGTTAGTTATGAGTGGGTCTGCTGTGACTG
CTGTAGTTCAGTGATGCACACCGCGTAGGAAGGTGTACTGTTTGTATCTT
CTTCGGTCTTTCTTTTGTATTCCCTTGTAGTTTTTTTCTGTTTTTCGGAT
CTTCCTAGGGCTCAGCACTTTTTGTGGCCACGGGCTAGATTCTGGCGATG
AGCTAAGAGCCCGTATAAACGGAAGGCAAAAAAAAACGAAATAGCGAAAA
CGAAAACGAAATTGGGCTCTGATTGGTCGGGAAAAAAAAACGACAGAGGC
GTGTTTTCGTTCCTACGTCCTCCGGGGAGGCGTTCCTTCGTTTTCGATTT
CGCAAAAATAAAGTGTTTCGGACCTTTTTTTTTGCGAAAACGAAAACGAA
ATGTATGGAGTTTGGTAACCTGGGAGGCTTGCCCATGAGCCTCCCAGGCA
GCGAACTCCTTCACACATACTGCGACTACGGTACACGGCGGTGCAACAGG
CACCAACCCGAACAGAGCGAGGCCCAATCCACACACTACAGCAGCGCAGC
AGACATCGCCGAGCCGTCATACCCGCCAGTCAGTGCAAGAGACAGCACAC
GGCCGTCTACGATACCCACACGCTGACACGATGCATTCCACCGCGTTATT
TGAAATTGGGCCCCGCGCGTTCTGGGTTTACATCATTTTCGGCGTTATCT
CCTCTATTCCGCTGCTCCAGCTCCTCGCAGCAGAAACGCGTTAATACCGA
AATAGAGTTTTTAATTTTTTTTTCCAGAAGAACGAAGTTATTTCGTTTTT
GTTTTCCGCTATTTCGTTTTTTTTTGCCTTCCGTTTATCCCCGCTCTAAT
GTGAGATTCAACAACAACAACACAAGCCACACAGGAGGAGGAGTTCCACG
CAGCAGGCGTAGTGATACCATACCATGTACACGTCGCACAGACATTCGAA
CACCTCCCGACTTTTGTTACGCGTACGCACATATTTAGCATCAGCCACAC
TTGGAAGCACACCGCATCGCAACAGGACGTAGTCTACTCCACAAACTTTT
TCCTTCCCTGGTCGTACTTCGTATATGATAACGAAGATTTGCGTTTGTGA
CTGCTGTACACGGCCTGCTCTTCCTACAACATATGATACCGATACTTCGT
GCTTGTTACATGATGAAAACCACCACCTCTGCAGTTTTTTTGTGCCCGTG
ACAATGACGAACACAGCAGCAGCAGCAGCAGCAGCAGCAGAAAGGCGCAC
ACATATCAGCGGCAAAAATATCAGAAAAATATAGAAACACACGTATATCA
AATCTTGACGTACTCGCACACAAGAATGAGTTTTTTTTCTAGCACCGCAC
GAACAGCAGTACAAGGTACAAGCTACCACAGGAGGATTTCCACTCAGGCG
TAGTGATACCATACCATGCACTCTTCGTACAGACATGCGAACACCTCTCA
ACTTTTGCTCCCTGCTGGTATGCGTTGTGTGTGTTTCCCTTGCTGTGTGT
GTCCCCGTGTGATCTGCTGCTGTGGGGTCTGGAGGGTTCTTTATTTTCTT
GTGGGGGGCTCCCGAGGCGTTTCGTGACCTGCTCAAACACGCAAATGCGT
TGTGCGTATGGGGTTCCCCGACGTTCCACATGCTTCCCTTTCTATGAATT
TACCATGTGCTTACCTCAGCACACTTTCTAGCGCCTACAATGCTCGTTGC
TTCGAATATCGCGTAAAGCTGCTTTGCTGACCTCGATTCCTTCCTCTTTC
TATTGCGATGATGTCCTTCAGGTGTGCGCACTAAGAGCGGCGTTATCAGT
GTTCACATACGTGTTGCTGTGGCTATCCGGATGCTTGCTGGCGGCTCCTA
CATCGACATTGCGCTGCTCTTTGGCGTTGCAATCCCGATCGTGTTGTTGA
TCATGTGGCAAGCGATCGATGCCATAAACAAGACGCCGGCAGTGGGTCCC
TTTTACTTCCAGCAAACGGAGGACGAGTGCGCTCAGGCTGCAGGCAAATG
GAAGGTGTGTCTGCAAATGAGGTGTTGTTGTTCCTTTATTGCGCGTAACA
AATTGTCATGACATGGGTACGGGTGCCAACGATATTTCTTGGTCTGTTCT
CAGTATACCATAAAACCCTTTGTTTCCCCCACCATTTATGATTCCCCCCA
TCTACTTTTCAGCCGAAAAGCATGGAAACTTTGATTTGCCCCCGGGAAGA
CGCAGAAAATAAGAAAAAAAAAGCCCCCCGGCATCCCGTGAATTTTTACC
TTTGGTAGTTGTTTTTCGAAGACTTCCACCCGGGGTTGCTTGATTTTTCA
ACACTTTGTTGTGCTTTCGGTATCGTTGCACATGGTTGAAGGGGTGACAC
GTCTTTGTGTTCGGCCCTTGCACGGCATCCCCACGTGCTGTCCTCCTTCC
TTTTCCTCCTGAATACTTGCTCGTATATCTTGTCCATGGCGGATTCAGCA
AACTCTAGAGAGAGAGAGAGGGCGCGCGTGTGTGTGTTCGTCTGCTGTGT
CCGTGCTTCATGTATCAATTTGTTTTTTGTGCCTTCCCCCCAGGGAAGAG
TATCCGCCGGGGAAGATTCGAAAAATAAATGTCCCCCTCCCCGTCAGTTT
ACCGCCGAGGGGTCGTGTTTAAAAAAATAAATGCCCTCTCCGGGAGTAAA
AGAAAGGTTTTTGCGGTACTCATTTTGCGGTACTCATCTTACATTGAGGT
TCCCGAATTCAAACTAAACCGATCTTGCGATGCTAGTTTATGTTTTGTTA
CCGTTTGTTTCATATATTCAGTCATACGACTCCCCCCTTAAAGTTGTAGA
CACACTTTCCTGACCCCGATCCCGACCCTGATCCCCACCCCGGCGCGCGC
TCCCCATCACCCACTACCCGCCTTTCTTTTGCTTCGTATCCCACCACCCA
CCACGCAGGGACTGAGCACCAATGGCGTGTTCGATCATGTGGTGGCCGCT
GTGGATGGTTTGTTCGTCAGATGCAAGAAGGTCGATGGAGTGAAGCCTTC
TGAGGGGTCCGCGAAGACGGGC

Coding sequence (CDS) from alignment at P-littoralis_Contig16:681926..686197+

>mRNA_P-littoralis_Contig16.172.3 ID=mRNA_P-littoralis_Contig16.172.3|Name=mRNA_P-littoralis_Contig16.172.3|organism=Pylaiella littoralis U1_48|type=CDS|length=528bp|location=Sequence derived from alignment at P-littoralis_Contig16:681926..686197+ (Pylaiella littoralis U1_48)
ATGCTCCCAAGATCAGGCAACAGATCCACGAGCCCCGGCGTCTATCATGC
ATTAGCGGATCACTTGACCGACTGCGAGGAGCATAACTGCTTCTCGCGCT
ACAACAGGATGCCGGTCGAGACTTTCGAGAAGCTTGTCGAGCTGCTTCGC
CCTTCCTTGGAAAGGAACGCACACATGACATGTGTGCGCACTAAGAGCGG
CGTTATCAGTGTTCACATACGTGTTGCTGTGGCTATCCGGATGCTTGCTG
GCGGCTCCTACATCGACATTGCGCTGCTCTTTGGCGTTGCAATCCCGATC
GTGTTGTTGATCATGTGGCAAGCGATCGATGCCATAAACAAGACGCCGGC
AGTGGGTCCCTTTTACTTCCAGCAAACGGAGGACGAGTGCGCTCAGGCTG
CAGGCAAATGGAAGGGACTGAGCACCAATGGCGTGTTCGATCATGTGGTG
GCCGCTGTGGATGGTTTGTTCGTCAGATGCAAGAAGGTCGATGGAGTGAA
GCCTTCTGAGGGGTCCGCGAAGACGGGC