prot_P-littoralis_Contig16.159.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig16.159.1
Unique Nameprot_P-littoralis_Contig16.159.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length931
Homology
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: D8LCM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM4_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 4.160e-112
Identity = 422/675 (62.52%), Postives = 456/675 (67.56%), Query Frame = 0
Query:  295 ATMAAKKSLVKKVKGLGDAGQWRQAMSEVESAVEGGLPADQYVYGSCVGAAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFNSAKASAAAAAGTKXXXXXXXXXXX---IGNSRS-GGKTGGSWKSRRPAGSGAALAGLDREREGAGGEEGSSSGSRFKRVGDGVGGSRSXXXXXXXXXXRRQAAPPTPSCDPDIQTINTVMSVCADAGRWELALEVMEKAQREDGLHPTRVTYNTAISACGRGGEADQAVRLLRAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEMEATASDGAGEEGRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTMRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMEAEAKERRREGEGRTGGDGGFSGPDRVSYNAAINACSNAGEWQQAVSLLAEMRRNA---------------------------------VLAGAAAGGIDNGKEDDTEEL----------------GRRDTQRQRRRSRGRAGGPTPDVVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGEGAGGQEARSTLLPLLDSMGSC-GFTPDKRLYGSALDACGDASLCQRARALLAEMVASGIPADGAAQSAVATACAA 915
            A MAAKKSLVKKVK LG  G+WRQA+SEV+SA+EGGL  D+YVYGSCVGAAA++XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N+AKA+AA      XXXXXXXX      IG+  S  G  G S  +R  AG G      D  +EG           R   VG G  GSRSXXXXX        A   +   DPDIQTINTVM+ CA  G WELALEVM+KAQREDGLHPTR+TY              +AV+LLR M   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A    G G  G     XXXXXXXXXXXXXXXXXXXXXXXXXX TMRRK     XXXXXXXXXXXXXXXXXXXXXXXXRDMEAEA ER RE  G  G  GGF+GP+RVS+NAAINACSNAGEWQQA+SLL EMRRNA                                 +LA  AA    N    D  EL                G     R+R    GR GGPTPDVVSYS  ITACSRAGNWERAL +L QM EDG+EPNS TF+TMI+AWR+DWGYG G+GA GQEAR  LLPLL SM +C G  PD RLYGSALDAC DASLCQ AR LLA MV+SG+P D  A+ AVATACAA
Sbjct:   44 AAMAAKKSLVKKVKDLGKVGRWRQAISEVDSAIEGGLLPDEYVYGSCVGAAADNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAAKANAAPXXXXXXXXXXXXXVAESPAIGDGSSWSGVVGRSGTARVRAGEG------DVRKEGL----------RLNGVGGGAKGSRSXXXXXSRRTGPGAAC--SSDYDPDIQTINTVMAACAAEGEWELALEVMKKAQREDGLHPTRITYXXXXXXXXXXXXXXRAVQLLREMRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGGKGGHGSGGARLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTMRRKGIAPGXXXXXXXXXXXXXXXXXXXXXXXXRDMEAEAGERGRE-PGSDGSGGGFAGPNRVSFNAAINACSNAGEWQQAISLLEEMRRNANAGSDAAEYNDDLALPANREHDSAADGNNKDAGLLAAGAAAAARNS---DPRELTPSEYGGGITAPEGAEGVSKADRRRXXXXGRTGGPTPDVVSYSATITACSRAGNWERALGLLDQMREDGLEPNSTTFSTMISAWRRDWGYG-GDGARGQEARGALLPLLASMATCRGLAPDARLYGSALDACADASLCQPARDLLAGMVSSGVPVDDRARRAVATACAA 695          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: A0A6H5KUL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUL4_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 9.860e-10
Identity = 49/126 (38.89%), Postives = 66/126 (52.38%), Query Frame = 0
Query:  710 PDRVSYNAAINACSNAGEWQQAVSLLAEMRRNAVLAGAAAGGI---DNGKEDDTEELGRRDTQRQRRRSRG--------------------RAGGPTPDVVSYSTAITACSRAGNWERALEVLQQM 812
            PD  SY+AAI AC N GEW++A++LL  MR   V++  AA      D  K  +T   G      QR R+                      RA G  PDV +++TAITAC +AG WERAL++L++M
Sbjct:  343 PDVFSYSAAITACGNCGEWRRALALLRVMREQGVVSYNAAAHACVGDQRKIGETRINGNNGVAEQRGRAAEEXXXXXEEGWAIVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLEEM 468          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: D8LMP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP8_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.100e-7
Identity = 49/133 (36.84%), Postives = 64/133 (48.12%), Query Frame = 0
Query:  710 PDRVSYNAAINACSNAGEWQQAVSLLAEMRR-----NAVLAGAAAGGI--DNGKEDDTEELGRRDTQRQRRRSRG-----------------------RAGGPTPDVVSYSTAITACSRAGNWERALEVLQQM 812
            PD  SY+AAI AC N GEW++A++LL  MR      N V   AAA     D  K  +T   G       R  +                         RA G  PDV +++TAITAC +AG WERAL++L++M
Sbjct:   86 PDVFSYSAAITACGNCGEWRRALALLRVMREQGVPPNVVSYNAAAHACVGDQRKLGETRINGNNGVAEPRGHAAEEEKXXXXXXXEGWALVLGLMEEMRAEGVAPDVFTFTTAITACGKAGQWERALDLLEEM 218          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: A0A7S3UV89_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV89_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 3.760e-7
Identity = 33/92 (35.87%), Postives = 50/92 (54.35%), Query Frame = 0
Query:  786 VVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGEGAGGQEARSTLLPLLDSMGSCGFTPDKRLYGSALDA 877
            VVSY+  ++AC++ G  ERALE+ ++ML++ VEP+  TFTT+I  +  DW                +   L+ M   G  P+   YG+AL A
Sbjct:  126 VVSYNILLSACNKGGMPERALELYEEMLDEDVEPDVVTFTTLIQIFSSDW--------------EKVQGFLEDMKQRGVAPNVVTYGAALAA 203          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: UPI001CF973AB (pentatricopeptide repeat-containing protein At4g18520, chloroplastic n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF973AB)

HSP 1 Score: 59.7 bits (143), Expect = 2.330e-5
Identity = 46/151 (30.46%), Postives = 68/151 (45.03%), Query Frame = 0
Query:  782 PTPDVVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGEGAGGQEARSTLLP-------LLDSMGSCGFT----------PDKRLYGSALDACGDA--SLCQRARALLAEMVASGIPADGAAQSAVATAC 913
            P  DVVS++  I+ C+R G+   ALE L+ MLE+GVEPN  T+++++ A         G+       ++T L        L++    CGF           P++ L+       G A    CQ A  L+  M A G  AD    + V  AC
Sbjct:  450 PLRDVVSWTAMISGCARLGHESEALEFLKDMLEEGVEPNPFTYSSVLKACAMLEDITHGKSIHSSAKKTTALSNVFVGSALINMYAKCGFVSEAFQVFDSMPERNLFTWKSMILGYARNGRCQEALKLMYRMQAEGFEADDFVLTTVYNAC 600          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: A0A7N2N612_QUELO (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2N612_QUELO)

HSP 1 Score: 59.3 bits (142), Expect = 3.090e-5
Identity = 49/151 (32.45%), Postives = 68/151 (45.03%), Query Frame = 0
Query:  782 PTPDVVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGE----GAGGQEARSTLL---PLLDSMGSCGFT----------PDKRLYGSALDACGDAS--LCQRARALLAEMVASGIPADGAAQSAVATAC 913
            P  DVVS++  I+ C+R G    ALE L++M+E+GV+PNS TF++ + A         G+     A    A S +     L+     CG+           P++ L        G A   LCQ A  L+  M A GI  D    S V TAC
Sbjct:  459 PLRDVVSWTAIISGCARLGQESEALEFLKEMMEEGVDPNSFTFSSALKACANMDSILQGKLIHSYANKTPAMSNVFVGSALIYMYSKCGYVSEAFQVFDSMPERNLVSWKAMIVGYAKNGLCQEALKLMYRMKAEGIEVDDYISSTVLTAC 609          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: A0A6P8CYQ3_PUNGR (pentatricopeptide repeat-containing protein At4g18520, chloroplastic n=4 Tax=Punica granatum TaxID=22663 RepID=A0A6P8CYQ3_PUNGR)

HSP 1 Score: 59.3 bits (142), Expect = 3.100e-5
Identity = 50/154 (32.47%), Postives = 71/154 (46.10%), Query Frame = 0
Query:  782 PTPDVVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGE----GAGGQEARSTLL---PLLDSMGSCGFT----------PDKRL--YGSALDACGDASLCQRARALLAEMVASGIPADGAAQSAVATACAAV 916
            P  DVVS+++ I+ C+  G    ALE+L++MLE+GVEPNS T+++ + A  K      G      A  + A S +     L+     CGF           P++ L  + S +        CQ A  LL  M A GI  D    +AV T C  V
Sbjct:  459 PFRDVVSWTSLISGCADLGQEAEALELLKRMLEEGVEPNSFTYSSALKACAKLEAGSIGRLIHSSANKKPAMSNVFVGSALIHMYSKCGFLSEAIRVFDGMPERNLVTWKSMIMGYARNGQCQEALKLLYRMRAEGIEVDDYVLAAVLTECGGV 612          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: A0A813ERT1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ERT1_POLGL)

HSP 1 Score: 56.6 bits (135), Expect = 3.900e-5
Identity = 32/98 (32.65%), Postives = 52/98 (53.06%), Query Frame = 0
Query:  784 PDVVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGEGAGGQEARSTLLPLLDSMGSCGFTPDKRLYGSALDACGDA 881
            PD+VSY+ A+ A   AG + +AL++L+Q+ E G+E ++A+F T++++  KD            E    +L LLD        PD   +  A+ AC  A
Sbjct:   94 PDIVSYNAAMAALVSAGQFTKALKLLRQLPERGIERDAASFNTVMSSLTKD-----------VEQCDLVLQLLDEASENSSGPDLTSFNIAITACARA 180          
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Match: A0A7S0UM30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UM30_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 6.080e-5
Identity = 34/123 (27.64%), Postives = 51/123 (41.46%), Query Frame = 0
Query:  713 VSYNAAINACSNAGEWQQAVSLL-----AEMRRNAVLAGAAAGGIDNGKEDDTEELGRRDTQRQRRRSRGRAGGPTPDVVSYSTAITACSRAGNWERALEVLQQMLEDGVEPNSATFTTMIAA 830
            V +NAAI+AC+ A +W+ A+SLL     A++  N  L                                     P PDVV+Y T + AC R G W+  L+  + M E G+  +  +  T + A
Sbjct:    1 VGFNAAISACAQASDWENAISLLTRMEEAKINNNGFLV------------------------------------PEPDVVTYGTVLAACERGGQWKLILKNSESMQERGLPLDGLSVMTCLHA 87          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LCM4_ECTSI4.160e-11262.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KUL4_9PHAE9.860e-1038.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMP8_ECTSI2.100e-736.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UV89_HETAK3.760e-735.87Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001CF973AB2.330e-530.46pentatricopeptide repeat-containing protein At4g18... [more]
A0A7N2N612_QUELO3.090e-532.45Uncharacterized protein n=3 Tax=Fagaceae TaxID=350... [more]
A0A6P8CYQ3_PUNGR3.100e-532.47pentatricopeptide repeat-containing protein At4g18... [more]
A0A813ERT1_POLGL3.900e-532.65Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S0UM30_9STRA6.080e-527.64Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 617..695
e-value: 5.3E-18
score: 67.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 705..843
e-value: 1.0E-24
score: 89.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 845..925
e-value: 2.0E-7
score: 32.7
coord: 500..616
e-value: 7.3E-28
score: 99.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 301..444
e-value: 4.4E-20
score: 74.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 618..672
e-value: 5.2E-7
score: 29.6
coord: 327..380
e-value: 1.6E-5
score: 24.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 545..579
e-value: 1.5E-7
score: 29.1
coord: 372..399
e-value: 1.3E-4
score: 19.9
coord: 510..543
e-value: 2.3E-4
score: 19.1
coord: 787..820
e-value: 2.1E-9
score: 35.0
coord: 626..659
e-value: 0.0023
score: 16.0
coord: 336..369
e-value: 7.8E-6
score: 23.7
coord: 661..688
e-value: 4.6E-5
score: 21.3
coord: 713..741
e-value: 2.9E-5
score: 21.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 542..590
e-value: 5.8E-8
score: 32.8
coord: 784..829
e-value: 7.6E-12
score: 45.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 713..741
e-value: 4.5E-5
score: 23.4
coord: 512..536
e-value: 0.14
score: 12.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 578..608
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 711..745
score: 10.785976
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 507..542
score: 9.700809
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 624..658
score: 10.818861
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 659..693
score: 9.251395
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..403
score: 9.45966
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 543..577
score: 11.597113
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 11.246351
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 785..819
score: 13.438611
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 753..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..280
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 658..912
coord: 497..688
coord: 308..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:606919..610682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.159.1mRNA_P-littoralis_Contig16.159.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig16 605840..610742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig16.159.1 ID=prot_P-littoralis_Contig16.159.1|Name=mRNA_P-littoralis_Contig16.159.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=931bp
MPMELESPSCFPNHAAFSSPGIGASSFLMTMSHKRCRQRQGATSRKRSDN
MMLLRRGAAATAAATLHNARVPWRGTSPGGGVNKGVQIGAAGERRHDDRL
FMFLGQKSMLSSAGRDSGAETGATTQAAAAASAEAAVHATADDRCMDARK
NDGREAATQLPKPRKQPQRDGSRGSSSSISISSSRQPVPRTGLPPPSDSE
RHHRPNGDPLLLRSSSSSRAPKTTTTVATTDGDDGDISFAGASNAALFGG
ASRNSSRGSSSGGEAAAEQESEAGSSTRSSGRARRQRDRRRRERATMAAK
KSLVKKVKGLGDAGQWRQAMSEVESAVEGGLPADQYVYGSCVGAAANSGR
WEEALDILHRMRQDGVVPTTPVYNAAIKACSRGGQLELALALLEEMRFNS
AKASAAAAAGTKAGASAIAGAPAIGNSRSGGKTGGSWKSRRPAGSGAALA
GLDREREGAGGEEGSSSGSRFKRVGDGVGGSRSSTSSSSSRRGRRQAAPP
TPSCDPDIQTINTVMSVCADAGRWELALEVMEKAQREDGLHPTRVTYNTA
ISACGRGGEADQAVRLLRAMRVDGLVPNVVSFNSTIAACAVRGQWKRALS
LLAEMEATASDGAGEEGRTGLSPDVYSFSSAIAACGRGGQWSLAAGLLST
MRRKGVAPGVVAFNAAISACGKAGQWERALGLLRDMEAEAKERRREGEGR
TGGDGGFSGPDRVSYNAAINACSNAGEWQQAVSLLAEMRRNAVLAGAAAG
GIDNGKEDDTEELGRRDTQRQRRRSRGRAGGPTPDVVSYSTAITACSRAG
NWERALEVLQQMLEDGVEPNSATFTTMIAAWRKDWGYGSGEGAGGQEARS
TLLPLLDSMGSCGFTPDKRLYGSALDACGDASLCQRARALLAEMVASGIP
ADGAAQSAVATACAAVGSPSPRQRVNPKGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat