mRNA_P-littoralis_Contig16.122.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: A0A6H5KP52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP52_9PHAE) HSP 1 Score: 166 bits (419), Expect = 8.410e-47 Identity = 72/81 (88.89%), Postives = 77/81 (95.06%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG+ QTQQA+YFGPDCS+LHCPTGDDP+T IDETDC+N TADGGRGVGSAGNLCHVDCSNRGICDY TGVCSCFDGYHG
Sbjct: 487 VGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHG 567
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI) HSP 1 Score: 166 bits (419), Expect = 8.960e-47 Identity = 72/81 (88.89%), Postives = 77/81 (95.06%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG+ QTQQA+YFGPDCS+LHCPTGDDP+T IDETDC+N TADGGRGVGSAGNLCHVDCSNRGICDY TGVCSCFDGYHG
Sbjct: 504 VGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHG 584
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA) HSP 1 Score: 135 bits (339), Expect = 4.410e-37 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG QTQ E+FGPDCSL HC +GDDPET +DET C N TA GGRGVG AGN CHVDCSNRGICDY TG C+CF G++G
Sbjct: 223 VGLGPGQTQTGEWFGPDCSLQHCSSGDDPETKVDETACFNKTAPGGRGVGEAGNRCHVDCSNRGICDYSTGECACFQGWYG 303
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: A0A7S4TA77_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4TA77_9STRA) HSP 1 Score: 126 bits (316), Expect = 7.340e-36 Identity = 53/82 (64.63%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPET-DIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG + Q+ E+FG DCSL HCP+ DDP T +DETDC N A GGRG G GN+CH+DCSNRG+CDY TG C+CFDGY+G
Sbjct: 26 VGLGNGERQEPEWFGADCSLRHCPSADDPRTTSVDETDCSNKDAKGGRGTGQPGNICHIDCSNRGLCDYVTGRCTCFDGYYG 107
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: A0A7S2S8K4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S8K4_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.970e-35 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG Q+ E+FG DCSL HCP+GDDP T +DETDC A GG G G GN CHVDCSNRGICDY TG C CFDG++G
Sbjct: 13 VGLGAGNRQEPEWFGADCSLRHCPSGDDPRTSLDETDCGGKMAKGGFGTGETGNFCHVDCSNRGICDYNTGRCQCFDGHYG 93
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.050e-35 Identity = 54/81 (66.67%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG ++Q A+YFGPDCS +HCP+GDDP T +DETDC+ I A GG G G+A NLCHVDC+NRGICDY G CSCF G++G
Sbjct: 181 VGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGIIAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYG 261
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: D0N4R0_PHYIT (EGF-like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N4R0_PHYIT) HSP 1 Score: 125 bits (315), Expect = 2.770e-35 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG ++Q ++YFGPDCS +HCP+GDDP T +DET C I A GG G G NLCHVDC+NRGICDY TG CSCF G++G
Sbjct: 62 VGLGAGESQLSQYFGPDCSKMHCPSGDDPMTAVDETKCVGIVATGGAGTGGPDNLCHVDCANRGICDYNTGECSCFSGFYG 142
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: D7FTJ2_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ2_ECTSI) HSP 1 Score: 127 bits (318), Expect = 2.950e-35 Identity = 56/81 (69.14%), Postives = 63/81 (77.78%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG Q QQAEYFG DCS CPTGDDP T D+TDC+ ITA+GG G+G AGN+CHVDCS RG CD+ TG CSCFDG+ G
Sbjct: 93 VGLGPGQRQQAEYFGADCSQRRCPTGDDPLTAEDDTDCEGITAEGGFGLGQAGNICHVDCSGRGQCDHTTGECSCFDGFFG 173
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: W2Q018_PHYPN (EGF-like domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2Q018_PHYPN) HSP 1 Score: 129 bits (323), Expect = 4.480e-35 Identity = 51/81 (62.96%), Postives = 66/81 (81.48%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG ++Q ++YFGPDCS +HCP+GDDP T +DETDC+ + ADGG G G+ NLCHVDC+NRGIC+Y +G CSCF G++G
Sbjct: 185 VGLGAGESQLSQYFGPDCSRMHCPSGDDPMTAVDETDCEGVVADGGGGTGAPDNLCHVDCANRGICNYNSGECSCFSGFYG 265
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP) HSP 1 Score: 129 bits (323), Expect = 4.590e-35 Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 1
Query: 1 VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGSAGNLCHVDCSNRGICDYETGVCSCFDGYHG 243
VGLG ++Q +++FGPDCS +HCP+GDDP T DETDC+ + A GG G G+AGNLCHVDC+NRGICDY +GVCSCF G++G
Sbjct: 186 VGLGAGESQLSQWFGPDCSRMHCPSGDDPMTAEDETDCEGVVAAGGVGPGAAGNLCHVDCANRGICDYSSGVCSCFPGFYG 266 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.122.1 >prot_P-littoralis_Contig16.122.1 ID=prot_P-littoralis_Contig16.122.1|Name=mRNA_P-littoralis_Contig16.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=81bp VGLGQAQTQQAEYFGPDCSLLHCPTGDDPETDIDETDCQNITADGGRGVGback to top mRNA from alignment at P-littoralis_Contig16:489510..490481+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.122.1 ID=mRNA_P-littoralis_Contig16.122.1|Name=mRNA_P-littoralis_Contig16.122.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=972bp|location=Sequence derived from alignment at P-littoralis_Contig16:489510..490481+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:489510..490481+ >mRNA_P-littoralis_Contig16.122.1 ID=mRNA_P-littoralis_Contig16.122.1|Name=mRNA_P-littoralis_Contig16.122.1|organism=Pylaiella littoralis U1_48|type=CDS|length=243bp|location=Sequence derived from alignment at P-littoralis_Contig16:489510..490481+ (Pylaiella littoralis U1_48)back to top |