mRNA_P-littoralis_Contig16.104.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig16.104.3
Unique NamemRNA_P-littoralis_Contig16.104.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: D7FSR6_ECTSI (Triosephosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR6_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 4.240e-126
Identity = 209/305 (68.52%), Postives = 234/305 (76.72%), Query Frame = 1
Query:    1 MKFTSLLVLAGVPAGSAFVAPAKAFHGSSLATGGATRSASSSSCQMMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFESPVTA 915
            MK TSLL LAG+ AGSAFVAPA AFHG+ + T  A R +SS+S QMMARVPFIAGNWKMNP+D+D+AKDLAK+V+EATTSV+VEVAVIPP  FLVPVK QVD V+GNKVAVG+QDLY +DAGAFTGA STGM+ASVGC Y+LCGHSERRSVFGDS+EMVN+KVHKVLDQGLKAILCIGESKEEYEAGLNKEICAV +GKGL GV+AEQM+S+VIAYEP                                                 TV ELMACPDIDGALVGGASLV EKFARIVGF++PV+A
Sbjct:    1 MKLTSLLTLAGLGAGSAFVAPATAFHGAGVTTT-APRGSSSASFQMMARVPFIAGNWKMNPLDVDSAKDLAKSVSEATTSVEVEVAVIPPHPFLVPVKDQVDGVDGNKVAVGSQDLYTEDAGAFTGASSTGMLASVGCEYILCGHSERRSVFGDSDEMVNKKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVHIGKGLTGVTAEQMESIVIAYEP-------------------------------------------------TVYELMACPDIDGALVGGASLVAEKFARIVGFKAPVSA 255          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A835ZJI0_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI0_9STRA)

HSP 1 Score: 336 bits (862), Expect = 1.640e-109
Identity = 168/257 (65.37%), Postives = 205/257 (79.77%), Query Frame = 1
Query:  136 MMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVD-VEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
            MMAR P I GNWKMNP D+ +A  LA  VA  T  ++ VEV +IPP  F+ PV+   D+++G+ + VGAQ+ +++D GAFTGA+ST M+ SVGC YVLCGHSERR++F + N ++N KV KVL + ++ ILCIGESKEEYE+GLNKE+CAVQ+GK LAGV+AEQM  +VIAYEPVWAIGTGL ATP  AQ VH Y+RS LA KYG  VAD VRIQYGGSVTPE+VD+LMACPDIDGALVGGASLV +KFARI  F++
Sbjct:    1 MMARTPIITGNWKMNPGDMASAVQLAADVAAQTKGLEGVEVGIIPPYPFVPPVR---DALKGSGITVGAQNAFVEDKGAFTGAVSTTMLLSVGCEYVLCGHSERRTIFKEDNALINSKVLKVLSKNMRPILCIGESKEEYESGLNKEVCAVQLGKNLAGVTAEQMKDVVIAYEPVWAIGTGLVATPEVAQSVHAYIRSWLAGKYGQAVADDVRIQYGGSVTPESVDDLMACPDIDGALVGGASLVADKFARICRFQA 254          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A4D9CPZ8_9STRA (Triosephosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPZ8_9STRA)

HSP 1 Score: 323 bits (828), Expect = 1.060e-103
Identity = 167/256 (65.23%), Postives = 203/256 (79.30%), Query Frame = 1
Query:  136 MMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSV-DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE 900
            M  R PFIAGNWK NP  L+ A DLAK V+ A++S  +V+VAV+ P  FLVPVK   ++++G+ V +GAQDLY +D GA+TGA S  MI SVG  +VLCGHSERR++FGD++E VN K+ KVL  GLKAILCIGE+K+EYE G+NK IC +Q+ KGL GV+ EQM+++ IAYEPVWAIGTGLTATP  AQ VH  +R++L + YG  VAD V IQYGGSVTPETVDELMA PDIDGALVGGASLVGEKFARI+ F+
Sbjct:   50 MSGRRPFIAGNWKENPDTLEAAIDLAKVVSTASSSASNVDVAVVVPFPFLVPVK---ETLKGSNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKLKKVLAAGLKAILCIGETKDEYELGVNKLICGLQLAKGLKGVTKEQMENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPETVDELMAMPDIDGALVGGASLVGEKFARIINFK 302          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S2XYZ2_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ2_9STRA)

HSP 1 Score: 319 bits (817), Expect = 3.400e-102
Identity = 169/287 (58.89%), Postives = 203/287 (70.73%), Query Frame = 1
Query:   43 GSAFVAPAKAFHGSSLATGGATRSASSSSCQMMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
            G+A ++   AF GS L+   A RS  S+   M  RVPFI GNWKMNP  L+ AK LA+ V         EVA+  P  FL PV   +D   G+ V  G + ++ +D GA+TGA+S  M+ +VGC YVL GHSERR +F   +  +++KV K+LD G+K +LCIGES+EEYEA LNKEIC +Q+ K LAGVSAE+M  + IAYEPVWAIGTGLTATP  AQ VH Y+RS +A KYG  VAD VRIQYGGSVTPETVDELMACPDIDGALVGGASL   KF+RIV FES
Sbjct:   11 GAAVISTVSAFFGSPLSYTSAMRS--STQLSMADRVPFICGNWKMNPTTLEEAKALAEGVKSGCDGSAAEVAIFTPHPFLYPVGKILD---GSTVKYGGETVFFEDKGAYTGAVSASMLKTVGCEYVLAGHSERRVLFKTDDSAISRKVRKILDSGMKPVLCIGESREEYEANLNKEICCIQLAKDLAGVSAEEMKLVTIAYEPVWAIGTGLTATPEIAQNVHAYIRSWVAGKYGQEVADEVRIQYGGSVTPETVDELMACPDIDGALVGGASLDAAKFSRIVNFES 292          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S2UU88_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU88_9STRA)

HSP 1 Score: 299 bits (765), Expect = 4.410e-95
Identity = 154/248 (62.10%), Postives = 187/248 (75.40%), Query Frame = 1
Query:  163 GNWKMNPVDLDTAKDLAKAVAEATTS-VDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
            GNWKMNP  LD A  LAK V E        EV VIPP+ FLVPV    D ++G+ V +G Q+ + +D GA+TGA+ST M+ SVG  YVL GHSERR++F D +  +N+KV K+L+ GLK ILCIGE+KEEY+ GL + +C +Q+ K LA V+AEQM  +VIAYEPVWAIGTGLTATP  AQ VHKY+RS +A K+G  VA+ VRIQYGGSVTPETVDELMACPDIDGALVGGASLV +KF RI  ++S
Sbjct:    1 GNWKMNPETLDEAVALAKGVVEQVKDGASGEVIVIPPSPFLVPVA---DIIKGSGVQLGGQNAFFEDKGAYTGAVSTCMLKSVGAKYVLAGHSERRTLFRDDDSSINRKVRKILEAGLKPILCIGETKEEYDQGLVELVCGLQISKDLADVTAEQMKDIVIAYEPVWAIGTGLTATPEIAQSVHKYIRSCIAKKFGDEVAEGVRIQYGGSVTPETVDELMACPDIDGALVGGASLVADKFGRICKYQS 245          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A835YXR2_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR2_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.370e-94
Identity = 162/287 (56.45%), Postives = 201/287 (70.03%), Query Frame = 1
Query:   55 VAPAKAF----HGSSLATGGATRSASSSSCQMMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSV-DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE 900
            V PA AF      SS +TG     A ++S Q+ AR P IAGNWK NP  +  A+ LA  VAEAT    DV V VIPP  FLVPV+    +     + +G Q+ Y ++ GA+TGA+ST M++SVGC+YVLCGHSERR+VF + +  +N+K+  VLD  +  ILCIGESKEEY+AGLNK +CA+Q+ K L GV+ E+M  +V+AYEPVWAIGTGLTATP  AQ VH Y+R  LA  Y   VAD V IQYGGSVTP++VD LMA PDIDGALVGGASL G KF RI+ ++
Sbjct:   10 VGPALAFVARPPASSTSTG-----ARATSTQLDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQ----NAASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 287          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S0QWG0_9CRYP (Triosephosphate isomerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QWG0_9CRYP)

HSP 1 Score: 298 bits (762), Expect = 9.590e-94
Identity = 153/257 (59.53%), Postives = 193/257 (75.10%), Query Frame = 1
Query:  142 ARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSV--DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERR--SVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE 900
            AR  FIAGNWK+NP  LD AK LA AV ++ +S+  D+++ V  P  FL PV    + V+G KV++GA+DL+ +D GAFTG +S GM+ SVG  YVL GHSERR  ++  +S+ ++N+K  KVLD GL  ILC+GE+KEEY+  LNK ICA+Q+ KGLAGV+ E+M  + IAYEPVWAIGTGLTATP  AQ VH Y+RS LA  Y    AD+VRIQYGGSVTP+TVD LMACPDIDGALVGGASL+ +KF RI+ ++
Sbjct:   53 ARNSFIAGNWKLNPTTLDEAKALASAVVKSASSITKDMDICVCCPHPFLAPVA---EIVKGTKVSLGAEDLFTEDKGAFTGGVSVGMLKSVGVKYVLVGHSERRQGNIATESDAVINKKTRKVLDAGLSPILCVGETKEEYQLNLNKAICALQLSKGLAGVTKEEMARVTIAYEPVWAIGTGLTATPEIAQEVHAYIRSWLAQMYDKATADTVRIQYGGSVTPDTVDSLMACPDIDGALVGGASLLADKFERIIHYK 306          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S4D8V7_HETAK (Triosephosphate isomerase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8V7_HETAK)

HSP 1 Score: 298 bits (763), Expect = 2.130e-93
Identity = 153/256 (59.77%), Postives = 190/256 (74.22%), Query Frame = 1
Query:  136 MMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
            +MAR P +AGNWKMNP  L+ A  LA  VA      D EV + P   FLVPV  ++D   G++V +GAQ+ Y +D GAFTG++ST M+ S+G  YVL GHSERR++F D +  +N+KV KVL  G+K ILCIGE K+E+E GL +++CA+Q+ K L GV+AE+M  +VIAYEPVWAIGTGLTATP  AQ VH ++R  +A KYG  VAD VRIQYGGSVTPETVDELMA PDIDGALVGGASL  EKF RI+ F++
Sbjct:   84 LMARQPIMAGNWKMNPCTLEEAAALAAGVAANPIENDAEVVLFPSHPFLVPVMEKID---GSQVKLGAQNCYTEDKGAFTGSVSTCMVKSIGVEYVLAGHSERRTLFRDDDGAINRKVKKVLSAGMKPILCIGELKDEFEEGLVEQVCALQLAKDLRGVTAEEMRRVVIAYEPVWAIGTGLTATPEIAQKVHAFIRGWIAGKYGKAVADEVRIQYGGSVTPETVDELMAQPDIDGALVGGASLDAEKFGRIMNFKT 336          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A6S9FXW6_HETAK (Triosephosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FXW6_HETAK)

HSP 1 Score: 293 bits (751), Expect = 3.380e-92
Identity = 152/257 (59.14%), Postives = 190/257 (73.93%), Query Frame = 1
Query:  145 RVPFIAGNWKMNPVDLDTAKDLAKAVAEATT-SVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFESPVT 912
            R PFIAGNWKMNP  L+ AK LA  VAE T  + +VE+AV  P  F+ PV  ++   EG+ V VGA+ ++ +D GA+TGA+S  M+ S+G  +VL GHSERR +F   ++ VN++V K+L++G+  ILCIGES+ EY+AGLN+EIC VQ+ K L  V+ EQM ++VIAYEPVWAIGTGLTATP  AQ VH  +R+ +A K+G  +A   RIQYGGSVTPETVDELMACPDIDGALVGGASL  EKFARI  FE   T
Sbjct:   45 RRPFIAGNWKMNPTSLEEAKTLAAKVAELTKENTEVEMAVFAPHPFIYPVAKEL---EGSNVVVGAETIFTEDKGAYTGAVSATMVKSMGGKWVLAGHSERRVLFNTDDDSVNRQVLKILNRGMGCILCIGESQAEYDAGLNQEICTVQLAKDLKDVTPEQMKNVVIAYEPVWAIGTGLTATPEIAQNVHASIRAWVAKKFGEQIAKETRIQYGGSVTPETVDELMACPDIDGALVGGASLDAEKFARICNFEMAAT 298          
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S0HT94_9CRYP (Triosephosphate isomerase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HT94_9CRYP)

HSP 1 Score: 285 bits (729), Expect = 1.870e-89
Identity = 147/252 (58.33%), Postives = 184/252 (73.02%), Query Frame = 1
Query:  154 FIAGNWKMNPVDLDTAKDLAKAVAEATTSV--DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERR--SVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGF 897
             IAGNWKMNP  LD AK LA +V E + S+  D++V +  P  FL       D  +G+KV VGAQD++ ++ GAFTG +S   + S+GC YVL GHSERR  ++  +SN ++N+KV   +D GL A LCIGE+KEE+EA  NKE+CA Q+ +GLAGV+ EQ+  +V+AYEPVWAIGTG TA+P  AQ VHK+VR  L + Y    ADSVRI YGGSVTP+ VD+LMACPDIDGALVGGASLVGEKFARI+ F
Sbjct:   12 LIAGNWKMNPESLDQAKALATSVVETSKSLKKDIDVCICCPHPFLT---TSSDICKGSKVEVGAQDIFTEEKGAFTGGVSIKQVKSIGCKYVLVGHSERRHGNIASESNAVINKKVKMTIDSGLVACLCIGETKEEFEAKKNKEVCAKQLAEGLAGVTKEQLAHVVLAYEPVWAIGTGYTASPEIAQDVHKFVRQWLEENYDKATADSVRILYGGSVTPDNVDQLMACPDIDGALVGGASLVGEKFARIMNF 260          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSR6_ECTSI4.240e-12668.52Triosephosphate isomerase n=2 Tax=Ectocarpus TaxID... [more]
A0A835ZJI0_9STRA1.640e-10965.37Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A4D9CPZ8_9STRA1.060e-10365.23Triosephosphate isomerase n=1 Tax=Nannochloropsis ... [more]
A0A7S2XYZ2_9STRA3.400e-10258.89Triosephosphate isomerase n=1 Tax=Fibrocapsa japon... [more]
A0A7S2UU88_9STRA4.410e-9562.10Triosephosphate isomerase n=1 Tax=Fibrocapsa japon... [more]
A0A835YXR2_9STRA1.370e-9456.45Triosephosphate isomerase n=1 Tax=Tribonema minus ... [more]
A0A7S0QWG0_9CRYP9.590e-9459.53Triosephosphate isomerase n=1 Tax=Cryptomonas curv... [more]
A0A7S4D8V7_HETAK2.130e-9359.77Triosephosphate isomerase n=3 Tax=Heterosigma akas... [more]
A0A6S9FXW6_HETAK3.380e-9259.14Triosephosphate isomerase n=1 Tax=Heterosigma akas... [more]
A0A7S0HT94_9CRYP1.870e-8958.33Triosephosphate isomerase n=1 Tax=Hanusia phi TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:409719..415805 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2903.EOD07548
Preferred nameTPI3
PFAMsTIM
Model size1669
Max annot lvl2759|Eukaryota
KEGG rclassRC00423
KEGG koko:K01803
KEGG ReactionR01015
KEGG Pathwayko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616
Exons7
Evalue8.85e-96
EggNOG OGsCOG0149@1|root,KOG1643@2759|Eukaryota
Ec32 ortholog descriptionTriose-phosphate isomerase
Ec32 orthologEc-03_002790.1
EC5.3.1.1
Descriptiontriosephosphate isomerase
Cds size918
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.104.3prot_P-littoralis_Contig16.104.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig16 410470..415805 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789767.421592-UTR-P-littoralis_Contig16:409718..4104691680789767.421592-UTR-P-littoralis_Contig16:409718..410469Pylaiella littoralis U1_48UTRP-littoralis_Contig16 409719..410469 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789767.4370825-CDS-P-littoralis_Contig16:410469..4106061680789767.4370825-CDS-P-littoralis_Contig16:410469..410606Pylaiella littoralis U1_48CDSP-littoralis_Contig16 410470..410606 -
1680789767.4528947-CDS-P-littoralis_Contig16:410905..4110321680789767.4528947-CDS-P-littoralis_Contig16:410905..411032Pylaiella littoralis U1_48CDSP-littoralis_Contig16 410906..411032 -
1680789767.4615145-CDS-P-littoralis_Contig16:411788..4118691680789767.4615145-CDS-P-littoralis_Contig16:411788..411869Pylaiella littoralis U1_48CDSP-littoralis_Contig16 411789..411869 -
1680789767.4716856-CDS-P-littoralis_Contig16:412305..4123921680789767.4716856-CDS-P-littoralis_Contig16:412305..412392Pylaiella littoralis U1_48CDSP-littoralis_Contig16 412306..412392 -
1680789767.48383-CDS-P-littoralis_Contig16:412865..4130511680789767.48383-CDS-P-littoralis_Contig16:412865..413051Pylaiella littoralis U1_48CDSP-littoralis_Contig16 412866..413051 -
1680789767.4927752-CDS-P-littoralis_Contig16:414107..4141881680789767.4927752-CDS-P-littoralis_Contig16:414107..414188Pylaiella littoralis U1_48CDSP-littoralis_Contig16 414108..414188 -
1680789767.505347-CDS-P-littoralis_Contig16:415586..4158051680789767.505347-CDS-P-littoralis_Contig16:415586..415805Pylaiella littoralis U1_48CDSP-littoralis_Contig16 415587..415805 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig16.104.3

>prot_P-littoralis_Contig16.104.3 ID=prot_P-littoralis_Contig16.104.3|Name=mRNA_P-littoralis_Contig16.104.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=306bp
MKFTSLLVLAGVPAGSAFVAPAKAFHGSSLATGGATRSASSSSCQMMARV
PFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQ
VDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRS
VFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKG
LAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGA
TVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE
SPVTA*
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mRNA from alignment at P-littoralis_Contig16:409719..415805-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig16.104.3 ID=mRNA_P-littoralis_Contig16.104.3|Name=mRNA_P-littoralis_Contig16.104.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6087bp|location=Sequence derived from alignment at P-littoralis_Contig16:409719..415805- (Pylaiella littoralis U1_48)
ATGAAGTTCACTTCTCTGTTGGTGCTGGCGGGCGTGCCTGCGGGGTCGGC CTTCGTGGCTCCCGCGAAGGCCTTCCACGGCTCTAGCTTGGCTACCGGAG GCGCAACGCGTTCAGCTTCGTCATCATCATGCCAGATGATGGCACGCGTG CCGTTCATCGCGGGCAACTGGAAGATGAACCCTGTCGACCTGGACACCGC CAAGGACCTCGCCAAGGCTGTAAGTTTTTTTGGTCGTATTTCGCACTTCT GCTCGATGCCCGTCCCTGTGTTTTACCATGCATTCATGTCTATGCCTTTG ATCCTCTCGACCACGCTGACGTTTAGCAGAGCTACTCCCGCAGTCGTCAT GTTTACCATCGTGACACGGGTTTTCTTGGTAACATGATTTTGCGCGTGTA AGCCAGCGCCGTGTGCGTGGCTGCCATCACAAGCAGGTCTTATATGTGTG GGCGTGGGTATGTTCTGAGCGAACTTACCTCTGTGTGGCAAATGTACTCC TTCACTGCTGCCTGTGTGTGCATTGGTTTGCGAGAGCTCGTTCGGCTTTT CGGTGATGCCAGCAGGAGCACTCGCTACTACTCCTGTATTTATTTGCCAT GTAAATATCTTTTTGAAATGTTGACGTTGCTTGCGTAGCGGGCGGTGCAA TGGGACTCTGTACTCTCTTTTTTTTTTGCACTCGAGTAGAAATAAGTGGG CATGATGTAAACACACTCACGATAGACACCTACAAAAAGAAGGTAAGCCT GGTTCAGTTCATCCCTACTGACTTCTCATGAACATCGCCACTGGACCGCT TTGTGGCATCTTTTTCAGATTTCGTGATCCGATTCACCATGATGTAAGAT ATCAGATGTGTTATACTGTATCCTATTTTGTCTGTCACGCCTCCGAGACG ACCTCCAAATTGGGTTGTTGAATCTGACAACCTCAGGGGAGCTGCGACCA CCTGCGACTACTCATGATATAATCTGATAAGTCTTGTGCAGAAACTAGGG TTTTACCCCTCTAAAAATTACCCGGGTAGCATGATTGTTACCCGCGGGTC CGCCGGTGACTGGAATCGCAATACGGTGCCTCTTCGGTAATGGGGTACCC ACATGGACATCACACACGGCCCCCCTTTAATTTTTTGGGGCACCGTATTT CACTATCTGGGGGGAAGGGGGTTCCACATTTCACGTCCCAATTACCTGGG TACTCGCCGGGTCCACCCCCTCGAGCCCCAACGGGTTCCCGATCTCCAAA GAAAGAGACGGGGTAACACCCCATTATGAAACGCGACCGCTGTACACTTA TTTTGTTACTTGCTCCACATATCCTCGTCCACACGAGTGTACATTATTAT CTTTGCAGGAAAAACATTTACAAGTATGTACATATAGTATGATATCATAT GTTCTTCCCAGGCACCAAGCATACAACTGCGTGGATGGACGAAGTGAAAT CATTGGACCATATCGTATAGTGTATGTAGAAATACCGTATGTATCTACAT CTGACTTGTTTCTTAAGCAAAGGACCGCTCAAGGTGCTTAGCGTGACTGC TGTTTCTATAATGCCATATTCGCGGCGGGTGGGCTTGTTGTATCGTGCTA CATGTTACCTTTTTCAGGTGGCGGAGGCGACGACGTCGGTGGATGTGGAG GTGGCCGTCATCCCCCCGGCCGCTTTCCTCGTGCCCGTGAAGGCTCAGGT ATGTCCAGTAGCACCTTTTTGTGTTACCCCCCCCCCCACCCCCCCAACCT GAATAATATTTAATGCTCGATTACCCTACCGCACAGAGCGTATCGGTGCC GAAAGGGGGGGTTGTTGGCAAGATATCGGTAAGAACTCCTCAAAAACTTA AACTTTAGATCATGTCGTTTGATGTCAGCGGTCACTTTCGTCGTCGCGTG TGTTGGCACGGCTGCGGATGTTGGCAGCCTCTACAACGGACACTGTGCTG ACACACTCCACATCCACGGCCTGGAGTATGTTGGCACCCCTTTTGTTGTT GAACGCACTGGCACCATCTTCGTTGTGGAGTAATCGAACGTTGCAAATTT GTCCGGGGGGGGTGGAGAACACAAAGGGTTAAGGTCACTCCAAAGGTAGG CAACGCCCGAGATGAAGATCGTAACGCGGTCATACTGCCTGGAGAAGGGG CGTGAAGCAAAAGTGCCTCTTTTTGGCTTGAGTGTTTTGGGGGTGTTTGG GGAGGGAGGTATGTTTTCGATTTCCGCCCACCTTTGGGGTTGGGATGAAA AATATCGAATGTTAGATAAAACCATCGATCATACAAGTATGTTGACACGG AAGTGGAGAGGGGTGCAAGATGCATATGCATGTGCACGTGCTTGTGTGGG ACGGGAAGTGGAGCCTGGGCAGCAATGCGTCCGCCCCTAAAACACGTATA TGCACGTGCGCGGCAGACGGTGTCGTGTGCATGGGGCGGTGAAGAGATAC AGATAAATAAAATGAACGAGAGAGAGAGAGACCGCGTGCAGCCGCGGGCG CCAGGCGTGGAGATGGGAAGGGCCTTGAGAGAGAAACGAGTAGAACGGAG AGAGGGCGCCCGCTTGCCCGCTCACAAGAAAATACACATATTTTGTCGAA GAGCCCAGAGGTGGAGAGGGATATTGACGGCAAGGGGCACCCACACACCG AGGTGAACGCGCCTCCCATCACTTTTCCGCCCGGGAATTGACCCTACCGA ACATCATTCCTACCCCCACCCCCCAAAAATGACCGTATATTCGAATCATT CCAGGTGGACAGCGTTGAGGGTAACAAGGTCGCGGTCGGGGCTCAGGACC TGTACATTCAGGACGCTGGGGCGTTCACGGGGGCCATCTCGACGGGGATG ATCGCGTCCGTGGGGTGCTCGTATGTCCTCTGCGGACACTCGGAGCGCCG ATCTGTGTTCGGGGACAGCAACGAGATGGTCAACCAGAAGGTAATTCCAC GATTTGAGCATGAACTTGGAAGCAAGAGTGTATTTTTGATGTCAATTCCT GCTGTGCGACCCCGGCTGGTGCACCCACTTCATACCGGAAGGTGTAGACC GGTGCCCAGAGTAAATGGGACGAACACACACATGGGTATGGTGAGAAAAT TCCATCGAATGACGTAGAAAAGAGGTGGGATGGCGTAGAGTACATTCAAA GTTTTTTTTTATTGGATATACGAAGTACACGTATATTAGAAGCAAATAGA GGCCTGCAATATTTTTTTCCAGTCATACATATGTACTGGTTGGTACCTGA TACATGTCGCACGCGTTTGCACGGGAACGCCTCTAATGCACCTTCAGAGT TGAGGATGGGGAAATGTGCATTGGGATGTATATTTGCCTAACTCTAACTC CTGCCTCCTCATTCTGTACGACGTACTTCGCATGTAACATAAACCGACTC AACTCGAGCGAAGGTGCACAAGGTTCTCGACCAGGGGCTGAAGGCCATCC TCTGTATCGGCGAGAGCAAGGAGGAGTACGAGGCGGGCCTCAACAAGGAG GTTTGTATAGACGTGACATCGACGCCGCGCTCTAGCGGAGTAACACACAC ACTGTCCACCTGCTGGGCCAAATAGAGATGGAAATCTCATGTGTGCCTTG ATTGCTCCGTATCGAAGATGGTGGTGTCAGCAGCCAACACCAAGCAATTT GCGCTTGTTTGACTTCGACAGGTCTCTTGACGAATCGGAAATTTTGTTGC GGTGCGGGCTTGTTGGTACGCTGGCGCGCATGTTTGTGGTGGTTGAACGT GTGTGGCACGGAAATGGGGTTGCGAACAGGGTGGAGGAGGGGTAACACAA CGAGGAAATGTAAGGAAATGATTGTGTCCCGCCGAGATGCTGGTTTTGCT GTTCTGTTTCGTCTCTGTCGCGTGCTGTCCCCCCCCAATCTCTCTCTCCC TCTCTATATCTGCCTCTCGCTGTGCGTGCTTTGTAGATCTGCGCCGTGCA GATGGGTAAGGGTCTGGCGGGGGTGAGCGCTGAACAAATGGACAGCCTGG TCATCGCGTACGAGCCGGTGAGAGTCTTTCTTTGCAGCCCTCAGATTACC GCACTCTCTCATCAGTAGTCAATGGTGGTGCATTTAGTCCGCGATTTCTG TGAAGGGGTTCAGCCGTTGAGTTTCGGTTTCGGGGAAGGGGGGTTGTTTT TTAAGCAGTTCGCTCATAAAGGACGCCTTGCAACAGTCGTCGTGGGCACG TATTTTTTCTTCATCCAAGACCGGATGAGCTAGAATCCACCTGATTGCAG CCCGAAACAGACCAAACCAGAGGAGCAACCCGTACGAAGACTGAACCTCT TCGTGTCACATGGCATGTTTTCATGCGAGGCTTGCGCGGAATCCATTTAT CATCAAAACCGTGGGACATCAAACTCTGACGACGACAATTGTGATGCTGG TAACGTCATGGAAAAACATGCACACGACGATGGTAGTGATTCTATCAAAG ACCATCGAAGAATAAGCCCATGAAGACAGCAGCAGTTCGACCAATGGCGT CCTATTACGGCGAGGTCAAAGTAACTCGTTGGGGGTATGCGCGCATGCAA GGGTTGCTTGAAAACCAATGAGCAACGGAGCGGCGGGTGTGGGGTACTGT TTTGTGTCTGACGCGAGAAGCGGGGACGTTCCATGCAAAGCGTCCATGCC CGCCCGGTCTCCCCGTGATGACATGCCTTCGGATGACCTTTGCTGGCTTT TCGCTGGCTTCCTCCCTTCCTTACCCCCCCCCTCCCCACGTTAACCTTTT TCTCTCCGTCTCTTGAACGTAAGGTTTGGGCGATCGGTACGGGTCTGACA GCCACCCCAGCGGACGCCCAGGGCGTCCACAAGTACGTGCGGTCTTTGCT CGCGGACAAGTACGGCGCTACCGTCGCGGACAGCGTGAGGATACAGTACG GTGAGTTTATCGGTTTGTTTGTGCTGCATCGCTGGTGTGTGCGGCGTTCG TTACTATTGTTGTCGCTGGTGCTGCTGCTGTTGTCGTGGTTGTTGCTGCT GCTGCTGCTGCTGCTTGGCGGGGCCTGTTTTGTTTTCTTGGCGCTGTTGT GGAAAATGGCATTCGAGTAAATCATATGCCATGAGCGTTTTTGAGCGTTT TGTACATTATTCCCTCTTTCCCCCGCTCCCCATATGCACACCCCTCATGT ACTCTACATTCTGCTTTTGGTCCCTCCGTGATCGTTATTGGAATGACAGG TGGTTCGGTGACCCCGGAGACAGTAGACGAGCTCATGGCCTGCCCCGACA TCGACGGCGCCCTGGTCGGGGGTGCGTCGCTAGTGGGAGAAAAGTTCGCC CGTATCGTCGGGTTCGAGTCCCCCGTTACCGCCTAGATCCAAGCGGGTTT CGATTCGATCGGATGAGCTTGGGAGCTACTGCGACGGGGCGGGCGGGCAC TCTCTCTTAGATAATCGGGCGCCTCGCACGTCTCTTGCGTTTGAATAAAT TTAGTTTCTTTCGCAATGTGGATCGATGAAGTTTAGTCTCGGGTGATCGA ATCAATACAATTTGAAACTTGGTCAGCAATTTCGTGTTTTGCGGTAGCTG CTTTGGCCGCTGGTTTCGAAGACTGTCGCGTTGAGGGGATACATTTCGCC GAAACAAAAATGAGCACGCTGTTCGATTTTGAGGCAAACCTGCTACAGCT GCTTTTTGAGCGACCTTTCTCGTGCCCCTAGATTGTCAACTTGGCGATGG GGAGGCATATGACGAGGAGGCGTGATTTTCCGAGGCAGCTGAAACAAAAT ATCGCCTGATCTTTCGTGTGAACTCGTTGTTGTGCTGATCTGAGTGCGAT CTATTCACACTGTTTACTTCACTCACTCCTCCCTTGTAGCCCGTTTACTT CTTGAAGAATAAGCCCCTCCCCCTTCTTTGGCTCCCTTCCATGGGCGTTT GTCATTTTTCCGTCCCGGCGCCTCTACCGGTACAGTTATGTTCGTTTCAT CACAATCTGGGTCTACATGAAATAAAATCGGACTACTGCTGTACGTTCGC AGCTACAGGTCAGCAGGGTACGCGGGTGGAAAGCGCTGAAATTTTGAGTC AACTGCGCGACTGGACGAAAAGCATATCTCGTCGACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig16:409719..415805-

>mRNA_P-littoralis_Contig16.104.3 ID=mRNA_P-littoralis_Contig16.104.3|Name=mRNA_P-littoralis_Contig16.104.3|organism=Pylaiella littoralis U1_48|type=CDS|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig16:409719..415805- (Pylaiella littoralis U1_48)
ATGAAGTTCACTTCTCTGTTGGTGCTGGCGGGCGTGCCTGCGGGGTCGGC
CTTCGTGGCTCCCGCGAAGGCCTTCCACGGCTCTAGCTTGGCTACCGGAG
GCGCAACGCGTTCAGCTTCGTCATCATCATGCCAGATGATGGCACGCGTG
CCGTTCATCGCGGGCAACTGGAAGATGAACCCTGTCGACCTGGACACCGC
CAAGGACCTCGCCAAGGCTGTGGCGGAGGCGACGACGTCGGTGGATGTGG
AGGTGGCCGTCATCCCCCCGGCCGCTTTCCTCGTGCCCGTGAAGGCTCAG
GTGGACAGCGTTGAGGGTAACAAGGTCGCGGTCGGGGCTCAGGACCTGTA
CATTCAGGACGCTGGGGCGTTCACGGGGGCCATCTCGACGGGGATGATCG
CGTCCGTGGGGTGCTCGTATGTCCTCTGCGGACACTCGGAGCGCCGATCT
GTGTTCGGGGACAGCAACGAGATGGTCAACCAGAAGGTGCACAAGGTTCT
CGACCAGGGGCTGAAGGCCATCCTCTGTATCGGCGAGAGCAAGGAGGAGT
ACGAGGCGGGCCTCAACAAGGAGATCTGCGCCGTGCAGATGGGTAAGGGT
CTGGCGGGGGTGAGCGCTGAACAAATGGACAGCCTGGTCATCGCGTACGA
GCCGGTTTGGGCGATCGGTACGGGTCTGACAGCCACCCCAGCGGACGCCC
AGGGCGTCCACAAGTACGTGCGGTCTTTGCTCGCGGACAAGTACGGCGCT
ACCGTCGCGGACAGCGTGAGGATACAGTACGGTGGTTCGGTGACCCCGGA
GACAGTAGACGAGCTCATGGCCTGCCCCGACATCGACGGCGCCCTGGTCG
GGGGTGCGTCGCTAGTGGGAGAAAAGTTCGCCCGTATCGTCGGGTTCGAG
TCCCCCGTTACCGCCTAG
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