mRNA_P-littoralis_Contig16.104.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: D7FSR6_ECTSI (Triosephosphate isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSR6_ECTSI) HSP 1 Score: 379 bits (972), Expect = 4.240e-126 Identity = 209/305 (68.52%), Postives = 234/305 (76.72%), Query Frame = 1
Query: 1 MKFTSLLVLAGVPAGSAFVAPAKAFHGSSLATGGATRSASSSSCQMMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFESPVTA 915
MK TSLL LAG+ AGSAFVAPA AFHG+ + T A R +SS+S QMMARVPFIAGNWKMNP+D+D+AKDLAK+V+EATTSV+VEVAVIPP FLVPVK QVD V+GNKVAVG+QDLY +DAGAFTGA STGM+ASVGC Y+LCGHSERRSVFGDS+EMVN+KVHKVLDQGLKAILCIGESKEEYEAGLNKEICAV +GKGL GV+AEQM+S+VIAYEP TV ELMACPDIDGALVGGASLV EKFARIVGF++PV+A
Sbjct: 1 MKLTSLLTLAGLGAGSAFVAPATAFHGAGVTTT-APRGSSSASFQMMARVPFIAGNWKMNPLDVDSAKDLAKSVSEATTSVEVEVAVIPPHPFLVPVKDQVDGVDGNKVAVGSQDLYTEDAGAFTGASSTGMLASVGCEYILCGHSERRSVFGDSDEMVNKKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVHIGKGLTGVTAEQMESIVIAYEP-------------------------------------------------TVYELMACPDIDGALVGGASLVAEKFARIVGFKAPVSA 255
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A835ZJI0_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJI0_9STRA) HSP 1 Score: 336 bits (862), Expect = 1.640e-109 Identity = 168/257 (65.37%), Postives = 205/257 (79.77%), Query Frame = 1
Query: 136 MMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVD-VEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
MMAR P I GNWKMNP D+ +A LA VA T ++ VEV +IPP F+ PV+ D+++G+ + VGAQ+ +++D GAFTGA+ST M+ SVGC YVLCGHSERR++F + N ++N KV KVL + ++ ILCIGESKEEYE+GLNKE+CAVQ+GK LAGV+AEQM +VIAYEPVWAIGTGL ATP AQ VH Y+RS LA KYG VAD VRIQYGGSVTPE+VD+LMACPDIDGALVGGASLV +KFARI F++
Sbjct: 1 MMARTPIITGNWKMNPGDMASAVQLAADVAAQTKGLEGVEVGIIPPYPFVPPVR---DALKGSGITVGAQNAFVEDKGAFTGAVSTTMLLSVGCEYVLCGHSERRTIFKEDNALINSKVLKVLSKNMRPILCIGESKEEYESGLNKEVCAVQLGKNLAGVTAEQMKDVVIAYEPVWAIGTGLVATPEVAQSVHAYIRSWLAGKYGQAVADDVRIQYGGSVTPESVDDLMACPDIDGALVGGASLVADKFARICRFQA 254
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A4D9CPZ8_9STRA (Triosephosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPZ8_9STRA) HSP 1 Score: 323 bits (828), Expect = 1.060e-103 Identity = 167/256 (65.23%), Postives = 203/256 (79.30%), Query Frame = 1
Query: 136 MMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSV-DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE 900
M R PFIAGNWK NP L+ A DLAK V+ A++S +V+VAV+ P FLVPVK ++++G+ V +GAQDLY +D GA+TGA S MI SVG +VLCGHSERR++FGD++E VN K+ KVL GLKAILCIGE+K+EYE G+NK IC +Q+ KGL GV+ EQM+++ IAYEPVWAIGTGLTATP AQ VH +R++L + YG VAD V IQYGGSVTPETVDELMA PDIDGALVGGASLVGEKFARI+ F+
Sbjct: 50 MSGRRPFIAGNWKENPDTLEAAIDLAKVVSTASSSASNVDVAVVVPFPFLVPVK---ETLKGSNVLIGAQDLYTEDKGAYTGATSLPMIKSVGAQWVLCGHSERRALFGDTDETVNAKLKKVLAAGLKAILCIGETKDEYELGVNKLICGLQLAKGLKGVTKEQMENVAIAYEPVWAIGTGLTATPEIAQDVHSNIRAILGEAYGQAVADKVVIQYGGSVTPETVDELMAMPDIDGALVGGASLVGEKFARIINFK 302
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S2XYZ2_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ2_9STRA) HSP 1 Score: 319 bits (817), Expect = 3.400e-102 Identity = 169/287 (58.89%), Postives = 203/287 (70.73%), Query Frame = 1
Query: 43 GSAFVAPAKAFHGSSLATGGATRSASSSSCQMMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
G+A ++ AF GS L+ A RS S+ M RVPFI GNWKMNP L+ AK LA+ V EVA+ P FL PV +D G+ V G + ++ +D GA+TGA+S M+ +VGC YVL GHSERR +F + +++KV K+LD G+K +LCIGES+EEYEA LNKEIC +Q+ K LAGVSAE+M + IAYEPVWAIGTGLTATP AQ VH Y+RS +A KYG VAD VRIQYGGSVTPETVDELMACPDIDGALVGGASL KF+RIV FES
Sbjct: 11 GAAVISTVSAFFGSPLSYTSAMRS--STQLSMADRVPFICGNWKMNPTTLEEAKALAEGVKSGCDGSAAEVAIFTPHPFLYPVGKILD---GSTVKYGGETVFFEDKGAYTGAVSASMLKTVGCEYVLAGHSERRVLFKTDDSAISRKVRKILDSGMKPVLCIGESREEYEANLNKEICCIQLAKDLAGVSAEEMKLVTIAYEPVWAIGTGLTATPEIAQNVHAYIRSWVAGKYGQEVADEVRIQYGGSVTPETVDELMACPDIDGALVGGASLDAAKFSRIVNFES 292
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S2UU88_9STRA (Triosephosphate isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU88_9STRA) HSP 1 Score: 299 bits (765), Expect = 4.410e-95 Identity = 154/248 (62.10%), Postives = 187/248 (75.40%), Query Frame = 1
Query: 163 GNWKMNPVDLDTAKDLAKAVAEATTS-VDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
GNWKMNP LD A LAK V E EV VIPP+ FLVPV D ++G+ V +G Q+ + +D GA+TGA+ST M+ SVG YVL GHSERR++F D + +N+KV K+L+ GLK ILCIGE+KEEY+ GL + +C +Q+ K LA V+AEQM +VIAYEPVWAIGTGLTATP AQ VHKY+RS +A K+G VA+ VRIQYGGSVTPETVDELMACPDIDGALVGGASLV +KF RI ++S
Sbjct: 1 GNWKMNPETLDEAVALAKGVVEQVKDGASGEVIVIPPSPFLVPVA---DIIKGSGVQLGGQNAFFEDKGAYTGAVSTCMLKSVGAKYVLAGHSERRTLFRDDDSSINRKVRKILEAGLKPILCIGETKEEYDQGLVELVCGLQISKDLADVTAEQMKDIVIAYEPVWAIGTGLTATPEIAQSVHKYIRSCIAKKFGDEVAEGVRIQYGGSVTPETVDELMACPDIDGALVGGASLVADKFGRICKYQS 245
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A835YXR2_9STRA (Triosephosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXR2_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.370e-94 Identity = 162/287 (56.45%), Postives = 201/287 (70.03%), Query Frame = 1
Query: 55 VAPAKAF----HGSSLATGGATRSASSSSCQMMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSV-DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE 900
V PA AF SS +TG A ++S Q+ AR P IAGNWK NP + A+ LA VAEAT DV V VIPP FLVPV+ + + +G Q+ Y ++ GA+TGA+ST M++SVGC+YVLCGHSERR+VF + + +N+K+ VLD + ILCIGESKEEY+AGLNK +CA+Q+ K L GV+ E+M +V+AYEPVWAIGTGLTATP AQ VH Y+R LA Y VAD V IQYGGSVTP++VD LMA PDIDGALVGGASL G KF RI+ ++
Sbjct: 10 VGPALAFVARPPASSTSTG-----ARATSTQLDARKPLIAGNWKENPCTVQEAEALASEVAEATKQAGDVGVVVIPPYPFLVPVQ----NAASGALMIGGQNCYFEEKGAYTGAVSTAMLSSVGCTYVLCGHSERRTVFRNDDNAINRKLRAVLDHNMMPILCIGESKEEYDAGLNKAVCAIQLSKDLKGVTGEEMKRIVVAYEPVWAIGTGLTATPEIAQSVHDYIRGYLAKMYSREVADEVIIQYGGSVTPDSVDALMAMPDIDGALVGGASLDGAKFGRIINYK 287
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S0QWG0_9CRYP (Triosephosphate isomerase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QWG0_9CRYP) HSP 1 Score: 298 bits (762), Expect = 9.590e-94 Identity = 153/257 (59.53%), Postives = 193/257 (75.10%), Query Frame = 1
Query: 142 ARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSV--DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERR--SVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFE 900
AR FIAGNWK+NP LD AK LA AV ++ +S+ D+++ V P FL PV + V+G KV++GA+DL+ +D GAFTG +S GM+ SVG YVL GHSERR ++ +S+ ++N+K KVLD GL ILC+GE+KEEY+ LNK ICA+Q+ KGLAGV+ E+M + IAYEPVWAIGTGLTATP AQ VH Y+RS LA Y AD+VRIQYGGSVTP+TVD LMACPDIDGALVGGASL+ +KF RI+ ++
Sbjct: 53 ARNSFIAGNWKLNPTTLDEAKALASAVVKSASSITKDMDICVCCPHPFLAPVA---EIVKGTKVSLGAEDLFTEDKGAFTGGVSVGMLKSVGVKYVLVGHSERRQGNIATESDAVINKKTRKVLDAGLSPILCVGETKEEYQLNLNKAICALQLSKGLAGVTKEEMARVTIAYEPVWAIGTGLTATPEIAQEVHAYIRSWLAQMYDKATADTVRIQYGGSVTPDTVDSLMACPDIDGALVGGASLLADKFERIIHYK 306
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S4D8V7_HETAK (Triosephosphate isomerase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8V7_HETAK) HSP 1 Score: 298 bits (763), Expect = 2.130e-93 Identity = 153/256 (59.77%), Postives = 190/256 (74.22%), Query Frame = 1
Query: 136 MMARVPFIAGNWKMNPVDLDTAKDLAKAVAEATTSVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFES 903
+MAR P +AGNWKMNP L+ A LA VA D EV + P FLVPV ++D G++V +GAQ+ Y +D GAFTG++ST M+ S+G YVL GHSERR++F D + +N+KV KVL G+K ILCIGE K+E+E GL +++CA+Q+ K L GV+AE+M +VIAYEPVWAIGTGLTATP AQ VH ++R +A KYG VAD VRIQYGGSVTPETVDELMA PDIDGALVGGASL EKF RI+ F++
Sbjct: 84 LMARQPIMAGNWKMNPCTLEEAAALAAGVAANPIENDAEVVLFPSHPFLVPVMEKID---GSQVKLGAQNCYTEDKGAFTGSVSTCMVKSIGVEYVLAGHSERRTLFRDDDGAINRKVKKVLSAGMKPILCIGELKDEFEEGLVEQVCALQLAKDLRGVTAEEMRRVVIAYEPVWAIGTGLTATPEIAQKVHAFIRGWIAGKYGKAVADEVRIQYGGSVTPETVDELMAQPDIDGALVGGASLDAEKFGRIMNFKT 336
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A6S9FXW6_HETAK (Triosephosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FXW6_HETAK) HSP 1 Score: 293 bits (751), Expect = 3.380e-92 Identity = 152/257 (59.14%), Postives = 190/257 (73.93%), Query Frame = 1
Query: 145 RVPFIAGNWKMNPVDLDTAKDLAKAVAEATT-SVDVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERRSVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGFESPVT 912
R PFIAGNWKMNP L+ AK LA VAE T + +VE+AV P F+ PV ++ EG+ V VGA+ ++ +D GA+TGA+S M+ S+G +VL GHSERR +F ++ VN++V K+L++G+ ILCIGES+ EY+AGLN+EIC VQ+ K L V+ EQM ++VIAYEPVWAIGTGLTATP AQ VH +R+ +A K+G +A RIQYGGSVTPETVDELMACPDIDGALVGGASL EKFARI FE T
Sbjct: 45 RRPFIAGNWKMNPTSLEEAKTLAAKVAELTKENTEVEMAVFAPHPFIYPVAKEL---EGSNVVVGAETIFTEDKGAYTGAVSATMVKSMGGKWVLAGHSERRVLFNTDDDSVNRQVLKILNRGMGCILCIGESQAEYDAGLNQEICTVQLAKDLKDVTPEQMKNVVIAYEPVWAIGTGLTATPEIAQNVHASIRAWVAKKFGEQIAKETRIQYGGSVTPETVDELMACPDIDGALVGGASLDAEKFARICNFEMAAT 298
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Match: A0A7S0HT94_9CRYP (Triosephosphate isomerase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HT94_9CRYP) HSP 1 Score: 285 bits (729), Expect = 1.870e-89 Identity = 147/252 (58.33%), Postives = 184/252 (73.02%), Query Frame = 1
Query: 154 FIAGNWKMNPVDLDTAKDLAKAVAEATTSV--DVEVAVIPPAAFLVPVKAQVDSVEGNKVAVGAQDLYIQDAGAFTGAISTGMIASVGCSYVLCGHSERR--SVFGDSNEMVNQKVHKVLDQGLKAILCIGESKEEYEAGLNKEICAVQMGKGLAGVSAEQMDSLVIAYEPVWAIGTGLTATPADAQGVHKYVRSLLADKYGATVADSVRIQYGGSVTPETVDELMACPDIDGALVGGASLVGEKFARIVGF 897
IAGNWKMNP LD AK LA +V E + S+ D++V + P FL D +G+KV VGAQD++ ++ GAFTG +S + S+GC YVL GHSERR ++ +SN ++N+KV +D GL A LCIGE+KEE+EA NKE+CA Q+ +GLAGV+ EQ+ +V+AYEPVWAIGTG TA+P AQ VHK+VR L + Y ADSVRI YGGSVTP+ VD+LMACPDIDGALVGGASLVGEKFARI+ F
Sbjct: 12 LIAGNWKMNPESLDQAKALATSVVETSKSLKKDIDVCICCPHPFLT---TSSDICKGSKVEVGAQDIFTEEKGAFTGGVSIKQVKSIGCKYVLVGHSERRHGNIASESNAVINKKVKMTIDSGLVACLCIGETKEEFEAKKNKEVCAKQLAEGLAGVTKEQLAHVVLAYEPVWAIGTGYTASPEIAQDVHKFVRQWLEENYDKATADSVRILYGGSVTPDNVDQLMACPDIDGALVGGASLVGEKFARIMNF 260 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.104.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.104.3 >prot_P-littoralis_Contig16.104.3 ID=prot_P-littoralis_Contig16.104.3|Name=mRNA_P-littoralis_Contig16.104.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=306bp MKFTSLLVLAGVPAGSAFVAPAKAFHGSSLATGGATRSASSSSCQMMARVback to top mRNA from alignment at P-littoralis_Contig16:409719..415805- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.104.3 ID=mRNA_P-littoralis_Contig16.104.3|Name=mRNA_P-littoralis_Contig16.104.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6087bp|location=Sequence derived from alignment at P-littoralis_Contig16:409719..415805- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:409719..415805- >mRNA_P-littoralis_Contig16.104.3 ID=mRNA_P-littoralis_Contig16.104.3|Name=mRNA_P-littoralis_Contig16.104.3|organism=Pylaiella littoralis U1_48|type=CDS|length=918bp|location=Sequence derived from alignment at P-littoralis_Contig16:409719..415805- (Pylaiella littoralis U1_48)back to top |