mRNA_P-littoralis_Contig16.83.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig16.83.5 vs. uniprot
Match: D8LCI9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI9_ECTSI) HSP 1 Score: 785 bits (2026), Expect = 6.610e-275 Identity = 438/638 (68.65%), Postives = 490/638 (76.80%), Query Frame = 2
Query: 71 MRLQQKTALQKVGVMVRAGMMEPPLWYAAAKQVPPFHRRPSNGIEALQLPWDTLATEFISRNPQMVEDPQWLGPRGFQPGAPPISHVFAKRQFALMQNGIKKEDAYKRTHEAMKKERAEDVAKVQRMVKEASSMAGARPSFVSDDDVYSGLKFWQSMMQETPYSDWDLAATQGLDVFLRRELIGWDDDRVKLAQSARDGTAAALEAETNRLRVTLFPETKTVEYAFPSDVVRSRSGXXXXXXXXXXXXXXXXXXGSVYNNAXXXXXXXXXXXXXXVEKEHEEGGLVREGSEEWKATRLNCGWKATLRRFEEMTEEAGYELDWSKDDRRSLDNFIVARCIRRSVLDEAFAWLPDPIAEALAKVNTSVL---PGDDTKRDAQVGGSAAEGGG------GERWISGAELEGFKGDWMALARRRTGRTASGAXXXXXXXXXXTSAMGRRRGDVRDINPVVSRPSMALHANLRAVLTQAKRQLLPDLVLEIDEKKSSVSSEERKAKDAARKKIVMSALEWEQEEMDEERAAVTDKLRAGMTVEEVDPIGVVRKKRLAKGTWKAERRRLLALEKKMYIEQKRAGEVYEVNTANREAREIVDDVLESEVVRRKANEFYAQEKARVKRENKLAADAVAASKA*KGE 1957
MRLQQKTALQKV V+V+AGMMEPP WYAAAKQVPPF RRPSNGIEAL+LPWDTLA EF SRNP MVEDP+WLGPRGF+PGAPPISHVFAKRQ+ALMQNG+ KEDAY+RTH MK ER+ DVA VQ+MV+EASSMAG RPSFVSDDDVYSGLKFWQSMMQET YS+WDLAA GLD FLRRELIGWDDDR+KLAQSARDGT+AALEAE NRLRVTLFPETKT EYA+PSDVVR R N VE E L R+G+EEW + RLNC W AT RRFEEMTEE GYELDWS +DRRSLDNFIV RCIRRS+LDEAF WLPDP+AEALAKVN S+L P + + EG G GERW+SG ELE F GDWM+LAR+RTGRT +G XXXXXXXX RRG RD+ VV RPSMAL +NLRAVLTQAKRQLLPDLVLE+DEK VS+EER+ KDAAR+KIVMSALEWE+EE+DE+R AVTDKLRAGMTVE+ DPI VRKKRLAKGTWKAERRRLL LEKK+Y E K+AG ++ A E+VDDV+ESE +RRKA+EFYA+EKAR+K+E KL A+A A + A K +
Sbjct: 1 MRLQQKTALQKVSVLVKAGMMEPPKWYAAAKQVPPFQRRPSNGIEALKLPWDTLANEFASRNPHMVEDPEWLGPRGFRPGAPPISHVFAKRQYALMQNGLMKEDAYERTHALMKMERSADVAAVQKMVREASSMAGGRPSFVSDDDVYSGLKFWQSMMQETSYSEWDLAAKLGLDAFLRRELIGWDDDRLKLAQSARDGTSAALEAEINRLRVTLFPETKTAEYAYPSDVVRPRDDA----------------------NEDEEELDGDVEDEEGVEGEE---ALARDGTEEWISARLNCSWSATQRRFEEMTEEVGYELDWSVEDRRSLDNFIVGRCIRRSILDEAFTWLPDPVAEALAKVNASILASPPXXXXXXXXEAATAEGEGTGDEDDKDGERWVSGPELEAFTGDWMSLARKRTGRTTTGVAAXXXXXXXXXXXX--RRGVARDVEAVVGRPSMALQSNLRAVLTQAKRQLLPDLVLEVDEKAGPVSAEERRVKDAARQKIVMSALEWEKEEIDEQRKAVTDKLRAGMTVEQADPIEAVRKKRLAKGTWKAERRRLLNLEKKLYYE-KQAGLEHDEGPATA-IPELVDDVVESESIRRKADEFYAKEKARIKKEIKLQAEAAAIAAAAKAK 609 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.83.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.83.5 >prot_P-littoralis_Contig16.83.5 ID=prot_P-littoralis_Contig16.83.5|Name=mRNA_P-littoralis_Contig16.83.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=626bp MRLQQKTALQKVGVMVRAGMMEPPLWYAAAKQVPPFHRRPSNGIEALQLPback to top mRNA from alignment at P-littoralis_Contig16:300370..318435- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig16.83.5 ID=mRNA_P-littoralis_Contig16.83.5|Name=mRNA_P-littoralis_Contig16.83.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=18066bp|location=Sequence derived from alignment at P-littoralis_Contig16:300370..318435- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig16:300370..318435- >mRNA_P-littoralis_Contig16.83.5 ID=mRNA_P-littoralis_Contig16.83.5|Name=mRNA_P-littoralis_Contig16.83.5|organism=Pylaiella littoralis U1_48|type=CDS|length=1878bp|location=Sequence derived from alignment at P-littoralis_Contig16:300370..318435- (Pylaiella littoralis U1_48)back to top |