prot_P-littoralis_Contig16.68.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig16.68.3
Unique Nameprot_P-littoralis_Contig16.68.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length359
Homology
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A6H5JEB4_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEB4_9PHAE)

HSP 1 Score: 595 bits (1533), Expect = 7.660e-213
Identity = 314/358 (87.71%), Postives = 321/358 (89.66%), Query Frame = 0
Query:    4 ENFAMGGADDAKPAPA---PARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATRGCSSQ 358
            ++  MGGA D+KPA     PARLQPWVEKYRPKTVDDVAHQDEVT+TLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTY+DRILELNASDERGIKV  +      KI T   QVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRL YIS EE V I+  GLQAIVDLSGGDMRKAVTAMQSASQFYAG EV TPEVLVDIAGKIPAEVKDALW AIKSGSY  IVAAVDDFMSSGYPLSTLLEDMQEATVAD  IPDH KADICRRIAEADRCLIDGCNEELQLLDLASVA R C SQ
Sbjct:    5 DDVTMGGAADSKPAAQQAPPARLQPWVEKYRPKTVDDVAHQDEVTNTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYRDRILELNASDERGIKVVRE------KIKT-FAQVAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLSYISREEDVKITADGLQAIVDLSGGDMRKAVTAMQSASQFYAGAEV-TPEVLVDIAGKIPAEVKDALWSAIKSGSYHKIVAAVDDFMSSGYPLSTLLEDMQEATVADTTIPDHNKADICRRIAEADRCLIDGCNEELQLLDLASVAARSCCSQ 354          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A836CA10_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA10_9STRA)

HSP 1 Score: 397 bits (1020), Expect = 7.970e-135
Identity = 209/343 (60.93%), Postives = 256/343 (74.64%), Query Frame = 0
Query:   14 AKPAPAPA-RLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQVAVGRATHQAG-YPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEV-VTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
            AKPA APA   +PWVEKYRP+TVDD+A+QDEV  TLK AI+TGV+PHLLFYGPPGTGKTST+LA+ARTLFGP+ Y+ RILELNASDERGIKV  +        +    Q AVG A   +  + CPPFK+IILDEADTMTPDAQ+ALRRTMETY+ VTRFCLICNYVTRIIEPLASRCAKFRF AL    ML RL +I+  E V+IS +G QA++ L+GGDMRKAVT +QSA Q Y G+   +T E L +++G++   + + +WLA++SG +  +  AVD FM  G PLS+LL  + E T+AD  IPD  KA IC++I+EAD  L+ G NEELQLLD+     R
Sbjct:   10 AKPAVAPAVHTKPWVEKYRPRTVDDIAYQDEVVKTLKKAISTGVMPHLLFYGPPGTGKTSTILAVARTLFGPEMYRTRILELNASDERGIKVVREK-------VKNFAQAAVGTANATSTTHSCPPFKLIILDEADTMTPDAQAALRRTMETYTKVTRFCLICNYVTRIIEPLASRCAKFRFRALSNETMLTRLDHIAAAEHVSISAAGKQAVIGLAGGDMRKAVTTLQSAHQLYGGSGTEITAEALAEVSGRVSPALVEQIWLAVRSGDFRTLTDAVDAFMFEGSPLSSLLTTLLEDTLADDAIPDVTKAAICKKISEADYSLLLGANEELQLLDVGGFMMR 345          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A4D9CQY7_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQY7_9STRA)

HSP 1 Score: 367 bits (943), Expect = 5.680e-123
Identity = 189/349 (54.15%), Postives = 246/349 (70.49%), Query Frame = 0
Query:    8 MGGADDAKPAPAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQVAVGRAT---HQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
             GG D A       ++QPWVEKYRP+ VDD+++QDEV  TLK AI TG LPHLLFYGPPGTGKTST+LA+AR+LFGP+ Y+ RILELNASDERGIKV          +  +VKQ A    T     AGYPCPPFK+IILDEADTMT +AQ+ALRRTMETYS +TRFCL+CNYVTRIIEPLASRCAKFRF  L +  M  RLR I T E  ++++  + AI+ ++ GDMRKAVT +QSA QFY G+  +TP+ + +++G +P  +  +LW AI + S+ N+ A  D+   +GYP   +L  + +  VA+ G+ D KKA +   +A A++ +IDG +E LQLLD+ ++  R
Sbjct:    8 QGGKDVAVAKAQQTKVQPWVEKYRPQGVDDISYQDEVVKTLKNAIQTGTLPHLLFYGPPGTGKTSTILAVARSLFGPE-YRSRILELNASDERGIKV----------VREKVKQFAQFTVTGLEKTAGYPCPPFKIIILDEADTMTTEAQAALRRTMETYSKITRFCLVCNYVTRIIEPLASRCAKFRFRPLSREVMEARLRAIGTAEGASVTQEMMNAILTVADGDMRKAVTTLQSAHQFYGGSSSITPDAVREMSGGVPDGLVQSLWEAISTQSFDNLKAQCDEVEMAGYPTMAVLHRLFDLVVAEEGVEDAKKAVVMAGLARAEKLIIDGASESLQLLDICALMMR 345          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A7S4DH62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH62_HETAK)

HSP 1 Score: 360 bits (924), Expect = 2.590e-120
Identity = 194/352 (55.11%), Postives = 240/352 (68.18%), Query Frame = 0
Query:   13 DAKPAPAP---ARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVK---QVAVGRAT-HQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGT---EVVTPEVLVDIAGKIPAEVKDALWLAIKSGS-YPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
            + +P P P   AR QPWVEKYRPKTVDD+AHQDEV  TLK AI TGVLPHLLFYGPPGTGKTST+LA+A+TLFGP+ Y+ R+LELNASDERGIKV          I  +VK   Q AVGR      G  CPPFK+++LDEADTMTPDAQ+ALRRTME +S VTRFCL+CNYV+RIIEPLASRCAKFRF  L   AM  RLR I  EE V  S+  +  IV ++GGDMRKAVT +Q+A + + G    + +  + ++++AG +PAE    LW A+     +  +    D   + GYP+  LL  +QE  +A  G+PD +KA +  R+A AD  L+DG  E LQLLD A+   R
Sbjct:    2 EIEPVPPPQKSARHQPWVEKYRPKTVDDIAHQDEVVKTLKNAIDTGVLPHLLFYGPPGTGKTSTILAVAKTLFGPEIYRARVLELNASDERGIKV----------IREKVKGFAQHAVGRGVVGPNGRRCPPFKIVVLDEADTMTPDAQAALRRTMEVHSKVTRFCLVCNYVSRIIEPLASRCAKFRFQPLQAPAMAARLRQIGAEEGVAFSDETVDTIVAVAGGDMRKAVTTLQTAHRLFGGGGSGKALGRDAILELAGDLPAEATAGLWRAVAEDRVFHRVQEEADALAAEGYPVGALLLRLQEEVLARPGLPDWRKAAVLERLARADAALVDGAGERLQLLDAAATLAR 343          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A1Y1HK96_KLENI (Replication factor C subunit RFC4 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HK96_KLENI)

HSP 1 Score: 353 bits (907), Expect = 6.740e-118
Identity = 181/341 (53.08%), Postives = 239/341 (70.09%), Query Frame = 0
Query:   16 PAPAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQ---VAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
            P P P+  QPWVEKYRP+ V+DVA Q+EV  TL+ ++ TG LPHLLFYGPPGTGKT+T LA+AR LFGP+  K R+LELNASD+RGI V          + T++K    VAVG     +GYPCPPFKV+ILDEAD+MT DAQ+ALRRTMETYS VTRFC ICNY++RIIEPLASRCAKFRF  LG+  M DR++YI  EE +++ +  L  +  +SGGDMR+A+T +QSAS+ +     ++ E ++ ++G +P +V + L  + +SG Y      V D ++ GY +S +L  + +  V    + D +KA IC R+AEAD+CLIDG +E LQLLD+AS   R
Sbjct:    3 PMPGPS-TQPWVEKYRPRNVNDVASQEEVVKTLRNSLETGNLPHLLFYGPPGTGKTTTALAIARQLFGPELVKTRVLELNASDDRGINV----------VRTKIKDFAAVAVGPGV--SGYPCPPFKVLILDEADSMTEDAQNALRRTMETYSKVTRFCFICNYISRIIEPLASRCAKFRFKPLGREIMTDRIQYICREEGLSLDDEALNTLGKVSGGDMRRAITCLQSASRLFGSR--ISSENIISVSGVVPDDVIEKLLTSCRSGDYDKAQGTVTDIIADGYAVSQILSQLHDEVVRAEDVTDEQKARICERVAEADKCLIDGGDEYLQLLDVASNTMR 328          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A445CA11_ARAHY (AAA domain-containing protein n=2 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A445CA11_ARAHY)

HSP 1 Score: 347 bits (889), Expect = 3.720e-115
Identity = 175/340 (51.47%), Postives = 235/340 (69.12%), Query Frame = 0
Query:   17 APAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQ---VAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
            AP     QPWVEKYRPK V DVAHQ+EV   L   + TG  PH+LFYGPPGTGKT+T LA+A  LFGP+ YK R+LELNASD+RGI V          + T++K    VAVG   H+ GYPCPP+K+I+LDEAD+MT DAQ+ALRRTMETYS VTRF  ICNY++RIIEPLASRCAKFRF  L +  M +R+ YI  EE +N+    L  +  +S GD+R+A+T +QSA++ +  +  ++ E L+ ++G +PAEV +A+  A KSG++ +    V++F++ GYP S +L  + EA + D  I D +KA I +++ EAD+CL+DG +E LQLLD  S   +
Sbjct:    2 APVMQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINV----------VRTKIKDFAAVAVGTIQHKGGYPCPPYKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSNRILYICNEEGLNLDAKALSTLSSISQGDLRRAITYLQSAARLFGSS--ISSEDLISVSGVVPAEVVEAILKACKSGNFDSANKEVNNFIAEGYPASQILTQLFEAILED-DISDEQKARIAKKLGEADKCLVDGADEYLQLLDTVSTTMQ 328          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A2P2JDL4_RHIMU (Replication factor C / DNA polymerase III gamma-tau subunit n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JDL4_RHIMU)

HSP 1 Score: 345 bits (886), Expect = 1.090e-114
Identity = 176/340 (51.76%), Postives = 229/340 (67.35%), Query Frame = 0
Query:   17 APAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQ---VAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
            AP     QPWVEKYRPK V DVAHQDEV   L   + T   PH+LFYGPPGTGKT+T LA+A  LFGP+ YK R+LELNASD+RGI V          + T++K    VAVG +  Q GYPCPPFK+IILDEAD+MT DAQ+ALRRTMET+S VTRF  ICNY++RIIEPLASRCAKFRF  L +G M  R+ YI  EE +N+    L  +  +S GD+R+A+T +Q A++ +  T  ++ + L+ ++G IP EV  AL+ A K G +    A V+D ++ G+P+S +L  + E  V    + D +KA IC+ + EAD+CL+DG +E LQLLD+A    R
Sbjct:    2 APVLQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTALAIAHELFGPELYKSRVLELNASDDRGINV----------VRTKIKDFAAVAVGSSQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEGIMSSRILYICQEEGLNLDTEALSTLSSISQGDLRRAITYLQGAARLFGST--ISSKDLISVSGVIPQEVVGALYAACKGGDFDYANAKVNDVIAEGHPVSQMLSQLFELVVEADDVSDEQKARICKSLGEADKCLVDGADEYLQLLDVAGSTMR 329          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A0A0KYI8_CUCSA (AAA domain-containing protein n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KYI8_CUCSA)

HSP 1 Score: 343 bits (879), Expect = 1.030e-113
Identity = 173/336 (51.49%), Postives = 233/336 (69.35%), Query Frame = 0
Query:   17 APAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQ---VAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLAS 349
            AP     QPWVEKYRPK V DVAHQDEV   L   + T   PH+LFYGPPGTGKT+T LA+A  LFGP+ YK R+LELNASD+RGI V          + T++K    VAV     Q GYPCPPFK+IILDEAD+MT DAQ+ALRRTMET+S VTRF  ICNY++RIIEPLASRCAKFRF  L +  M  R+ +I  EE +++    L  +  +S GD+R+A+T +QSA++ +  +  ++ + LV+++G IP EV DAL++A KSG++      V++ ++ GYP++ +L  + E  + D  + D +KA IC+++AEAD+CL+DG +E LQLLD+ S
Sbjct:    2 APLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINV----------VRTKIKDFAGVAVSSGQRQGGYPCPPFKIIILDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSKRILHIGNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSS--ISSKDLVNVSGIIPQEVVDALFVACKSGNFDTANKKVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARICKKLAEADKCLVDGADEYLQLLDVVS 325          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: A0A6V7QGJ8_ANACO (AAA domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QGJ8_ANACO)

HSP 1 Score: 343 bits (879), Expect = 1.220e-113
Identity = 177/346 (51.16%), Postives = 233/346 (67.34%), Query Frame = 0
Query:   17 APAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQ---VAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATRG-CSSQ 358
            AP     QPWVEKYRPK V DVAHQDEV   L   + T  LPH+LFYGPPGTGKT+T LA+A  LFGP+ YK R+LELNASD+RGI V          + T++K    VAVG   HQ GYPCPP+K+IILDEAD+MT DAQ+ALRRTMETYS VTRF  ICNY++RIIEPLASRCAKFRF  L +  M  R+ +I  EE +N+    L  +  +S GD+R+A+T +QSA++ +  +  ++   L+ ++G IP +V ++L+ A KSG +      V   ++ GYP+S L+  + E  V    I D +KA IC+++ EAD+CL+DG +E LQL+D+AS   R  C+ Q
Sbjct:    2 APLLPSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETADLPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINV----------VRTKIKDFAAVAVGSKPHQGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSGRILHICNEEGLNLDSEALSTLGSISQGDLRRAITYLQSAARLFGSS--ISSNDLISVSGVIPQDVVESLFTACKSGDFDVANKEVTRIIAEGYPVSQLICQLLEVIVNAEDIQDEQKARICKKLGEADKCLVDGADEYLQLMDVASHTMRALCNMQ 335          
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Match: I3SKP0_LOTJA (AAA domain-containing protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3SKP0_LOTJA)

HSP 1 Score: 342 bits (876), Expect = 3.580e-113
Identity = 173/340 (50.88%), Postives = 235/340 (69.12%), Query Frame = 0
Query:   17 APAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKGAIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDERGIKVSYQTYNVCIKILTRVKQ---VAVGRATHQAGYPCPPFKVIILDEADTMTPDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGAMLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTEVVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLSTLLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASVATR 353
            AP     QPWVEKYRPK V DVA+QDEV   L   + TG  PH+LFYGPPGTGKT+T LA+A  LFGP+ YK R+LELNASD+RGI V          + T++K    VAVG    + GYPCPP+K+I+LDEAD+MT DAQ+ALRRTMETYS VTRF  ICNY++RIIEPLASRCAKFRF  L +  M  R+ YI  EE +++   GL  +  +S GD+R+A+T +QS+++ + G+ + + + L+ ++G +P  V +A+  A KSG++      V++F++ GYP S LL  + +A V + G  D +KA IC+++ EAD+CL+DG +E LQLLD+ S  T+
Sbjct:    2 APIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINV----------VRTKIKDFAAVAVGTNPKKGGYPCPPYKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIMSSRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLF-GSHISSKD-LISVSGVVPENVVEAILKACKSGNFDLANKEVNNFIAEGYPASQLLTQLFDAIVEEKGTSDKQKARICKKLGEADKCLVDGADEYLQLLDVISNTTK 329          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.68.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEB4_9PHAE7.660e-21387.71AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CA10_9STRA7.970e-13560.93P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9CQY7_9STRA5.680e-12354.15AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S4DH62_HETAK2.590e-12055.11Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Y1HK96_KLENI6.740e-11853.08Replication factor C subunit RFC4 n=1 Tax=Klebsorm... [more]
A0A445CA11_ARAHY3.720e-11551.47AAA domain-containing protein n=2 Tax=50 kb invers... [more]
A0A2P2JDL4_RHIMU1.090e-11451.76Replication factor C / DNA polymerase III gamma-ta... [more]
A0A0A0KYI8_CUCSA1.030e-11351.49AAA domain-containing protein n=5 Tax=Cucurbitacea... [more]
A0A6V7QGJ8_ANACO1.220e-11351.16AAA domain-containing protein n=3 Tax=Ananas comos... [more]
I3SKP0_LOTJA3.580e-11350.88AAA domain-containing protein n=1 Tax=Lotus japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 56..197
e-value: 8.3E-10
score: 48.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 25..195
e-value: 1.6E-48
score: 166.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 24..260
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 275..348
e-value: 1.9E-10
score: 41.0
NoneNo IPR availableGENE3D1.20.272.10coord: 264..352
e-value: 5.2E-21
score: 76.7
NoneNo IPR availableGENE3D1.10.8.60coord: 198..262
e-value: 4.6E-16
score: 60.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 22..350
NoneNo IPR availablePANTHERPTHR11669:SF20REPLICATION FACTOR C SUBUNIT 4coord: 22..350
NoneNo IPR availableCDDcd00009AAAcoord: 41..188
e-value: 3.24859E-23
score: 92.2091
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 196..261
e-value: 9.78961E-14
score: 63.3169
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 60..191
e-value: 4.7E-14
score: 53.0
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 265..349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:232099..256952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.68.3mRNA_P-littoralis_Contig16.68.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig16 231465..257133 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig16.68.3 ID=prot_P-littoralis_Contig16.68.3|Name=mRNA_P-littoralis_Contig16.68.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=359bp
MADENFAMGGADDAKPAPAPARLQPWVEKYRPKTVDDVAHQDEVTSTLKG
AIATGVLPHLLFYGPPGTGKTSTVLALARTLFGPDTYKDRILELNASDER
GIKVSYQTYNVCIKILTRVKQVAVGRATHQAGYPCPPFKVIILDEADTMT
PDAQSALRRTMETYSTVTRFCLICNYVTRIIEPLASRCAKFRFSALGQGA
MLDRLRYISTEEAVNISESGLQAIVDLSGGDMRKAVTAMQSASQFYAGTE
VVTPEVLVDIAGKIPAEVKDALWLAIKSGSYPNIVAAVDDFMSSGYPLST
LLEDMQEATVADAGIPDHKKADICRRIAEADRCLIDGCNEELQLLDLASV
ATRGCSSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR013748Rep_factorC_C
IPR003959ATPase_AAA_core
IPR008921DNA_pol3_clamp-load_cplx_C