prot_P-littoralis_Contig16.29.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig16.29.2
Unique Name	prot_P-littoralis_Contig16.29.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	755

Homology

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: A0A6H5JIQ8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ8_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 8.220e-62
Identity = 106/122 (86.89%), Postives = 111/122 (90.98%), Query Frame = 0

Query:  526 GMPAGMAGMGVGVXMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDDS 647
            GMP  M GMG+G+XMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASK+ VENLPTI VAKG+ LEGQECAVCKDEF   +KARELPC HSFHE CILPWVAERNTCPTCRHELPTDDS
Sbjct:  335 GMPGAMGGMGLGLXMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTITVAKGSELEGQECAVCKDEFAAGEKARELPCQHSFHEQCILPWVAERNTCPTCRHELPTDDS 456

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: M4BXL0_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXL0_HYAAE)

HSP 1 Score: 139 bits (350), Expect = 4.360e-35
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            GN GDYAFG+++ +I QLM  D NRHG PPA+KEVVE LP +KV +       EC VCKD F VDD+   LPC HSFH  CI+PW+ + N+CP CR ELPTDD
Sbjct:    7 GNAGDYAFGNMANVINQLMQHDPNRHGAPPAAKEVVEMLPKVKVTQNEVDGSAECPVCKDLFAVDDEVHCLPCNHSFHPDCIVPWLKQHNSCPLCRFELPTDD 109

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: D0MY65_PHYIT (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MY65_PHYIT)

HSP 1 Score: 143 bits (361), Expect = 8.940e-35
Identity = 61/103 (59.22%), Postives = 74/103 (71.84%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            GN GDYAFG+++ +I QLM  D NRHG PPA+KEVV+ LP +K+ +G      EC VCKD F VDD+   LPC HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  151 GNAGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVDKLPKVKITQGEVDGSAECPVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 253

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: K3WPY8_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPY8_GLOUD)

HSP 1 Score: 143 bits (360), Expect = 1.890e-34
Identity = 63/110 (57.27%), Postives = 76/110 (69.09%), Query Frame = 0

Query:  537 GVXMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            G   G   N GDYAFG LS +I QLM  D NRHG PPA+K+VVE LP +K+ +       EC VCKD F VD+++ +LPC HSFH  CILPW+ + N+CP CRHELPTDD
Sbjct:  161 GPMTGLASNPGDYAFGSLSNVINQLMQNDPNRHGAPPAAKDVVETLPKLKITQSDVDASAECPVCKDLFVVDEESHKLPCAHSFHIDCILPWLKQHNSCPVCRHELPTDD 270

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: A0A329S505_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S505_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.710e-34
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            GN GDYAFG+++ +I QLM  D NRHG PPA+KEVVE LP +K+ +       EC VCKD F VDD+   LPC HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  170 GNAGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVEKLPKVKITQVEVDGSAECPVCKDSFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPVCRFELPTDD 272

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: A0A3R7G1L0_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G1L0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.950e-34
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            GN GDYAFG+++ +I QLM  D NRHG PPASKEVVE LP +K+ +       EC VCKD F VDD+   LPC HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  185 GNPGDYAFGNMANVINQLMQNDPNRHGAPPASKEVVEKLPKVKITQSEVDNSAECPVCKDFFAVDDEVHRLPCDHSFHPDCILPWLKQHNSCPLCRFELPTDD 287

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: W2L147_PHYPR (RING-type E3 ubiquitin transferase n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2L147_PHYPR)

HSP 1 Score: 140 bits (353), Expect = 1.700e-33
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            GN GDYAFG+++ +I QLM  D NRHG PPA+KEVVE LP +K+ +       EC VCKD F VDD+   LPC HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  169 GNPGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVEKLPKVKITQVEVDGSAECPVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 271

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: A0A3R7W2Z9_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W2Z9_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.090e-33
Identity = 60/103 (58.25%), Postives = 73/103 (70.87%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            GN GDYAFG+++ +I QLM  D NRHG PPA+KE+VE LP +K+ +       EC VCKD F VDD+   LPC HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  217 GNSGDYAFGNMANVINQLMQNDQNRHGAPPAAKEIVEQLPKVKITQNEVDGSAECTVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 319

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: A0A024G705_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G705_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.050e-32
Identity = 57/104 (54.81%), Postives = 75/104 (72.12%), Query Frame = 0

Query:  544 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDDS 647
            GN GDY  G+LS +I QLM  D+NRHG PPA+KE +E LP + + +       ECAVCKDEF + ++AR +PC H+FH  CILPW+ + N+CP CR+ELPTDD+
Sbjct:  138 GNPGDYVVGNLSTVINQLMQNDSNRHGTPPAAKEAIEKLPMLAITQEDININPECAVCKDEFNLAEEARRMPCTHTFHPDCILPWLKQHNSCPICRYELPTDDA 241

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BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Match: A0A067CFN4_SAPPC (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFN4_SAPPC)

HSP 1 Score: 139 bits (349), Expect = 1.120e-32
Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 0

Query:  546 VGDYAFGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAVCKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDD 646
            +GDYAFG++S +I  LM  D N+HG PPASK VVE+LP + + +    + Q+CAVCKD F + D+ R LPC H FH  CILPW+A+ N+CP CR ELPTDD
Sbjct:  189 IGDYAFGNISTIINHLMQNDPNQHGAPPASKSVVESLPVVHITEEDVAKNQDCAVCKDMFALHDEIRRLPCTHDFHPDCILPWLAQHNSCPVCRFELPTDD 289

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig16.29.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JIQ8_9PHAE	8.220e-62	86.89	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]
M4BXL0_HYAAE	4.360e-35	59.22	RING-type domain-containing protein n=1 Tax=Hyalop...	[more]
D0MY65_PHYIT	8.940e-35	59.22	RING-type E3 ubiquitin transferase n=3 Tax=Phytoph...	[more]
K3WPY8_GLOUD	1.890e-34	57.27	RING-type domain-containing protein n=1 Tax=Globis...	[more]
A0A329S505_9STRA	2.710e-34	59.22	RING-type E3 ubiquitin transferase n=1 Tax=Phytoph...	[more]
A0A3R7G1L0_9STRA	2.950e-34	60.19	RING-type E3 ubiquitin transferase n=3 Tax=Phytoph...	[more]
W2L147_PHYPR	1.700e-33	59.22	RING-type E3 ubiquitin transferase n=6 Tax=Phytoph...	[more]
A0A3R7W2Z9_9STRA	2.090e-33	58.25	RING-type E3 ubiquitin transferase n=2 Tax=Peronos...	[more]
A0A024G705_9STRA	1.050e-32	54.81	RING-type domain-containing protein n=1 Tax=Albugo...	[more]
A0A067CFN4_SAPPC	1.120e-32	56.44	RING-type domain-containing protein n=2 Tax=Saprol...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 598..638 e-value: 3.5E-8 score: 43.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 597..639 e-value: 2.6E-12 score: 46.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 598..639 score: 12.459772
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 561..645 e-value: 2.6E-21 score: 77.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..302
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 646..670
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 646..754
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..447
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 680..754
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..347
None	No IPR available	PANTHER	PTHR15710:SF41	OS06G0101300 PROTEIN	coord: 541..697
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 10..47
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 541..697
None	No IPR available	PANTHER	PTHR15710:SF41	OS06G0101300 PROTEIN	coord: 10..47
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 597..639 e-value: 4.4409E-22 score: 87.3732
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 578..647

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig16	contig	P-littoralis_Contig16:109029..121530 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig16.29.2	mRNA_P-littoralis_Contig16.29.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig16 107231..121700 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig16.29.2 ID=prot_P-littoralis_Contig16.29.2|Name=mRNA_P-littoralis_Contig16.29.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=755bp
MEASSSEQTPVFFCHFCKSRVRVRKTSTQELECRRCEQTFVEELMESVVG
NIALGGGNGRDEPPSPFAATAAAGTARAGGGGEGGGDGASAGGSTSHQRF
PGTPMPFSMLQAFGVGTLQPLNVGSMAPAAEAATGTGGSGGGGGGGDGEG
VRAGPLFWGGQVHIGRGASGASNNSSSSSGSAASNAASGNNSSSSGGGGS
LGSRVRRNRQSSSAGGAGSSSTTTTTTTTTSETRGSASRAAAATAATGSS
GEAGGARPDGRSSSSSGGGGGGGGSTGSSGRRSRSRTGSAAATANPNPNG
EAAATTPARGGAAAVDEIRRRHSQQHQQAHQQRQHQRQHEDAHHEAQLAN
GVEQLVEQLLAGGMVQAGMMQAGMVQIGGAGPPGGANAGENQDGTEAHGG
QAAGAGQGDGGGSGGGGGGGAGGAGAAGGGGGGGGGPDGEQHPLVGTILQ
ALGGMGAGHAEIFIGPNMQRVQAGGGAGGGDAAGAAAGGGGGDAGGADFG
GGADFGGGIGAMMGGQALGFLLRRFGMPAGMAGMGVGVGMGPGGNVGDYA
FGDLSQLIQQLMAADTNRHGPPPASKEVVENLPTIKVAKGTALEGQECAV
CKDEFEVDDKARELPCLHSFHEHCILPWVAERNTCPTCRHELPTDDSTSA
SNNNENNSNSTNNSNDDDGGGGNINVGGGQEDDGGSSGNSSNNNNNSNAA
STASSSSRPVSSSSAAPARAPSTRSRASGVGGSGGSGGSGGSQATSGRPS
SDAR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD