mRNA_P-littoralis_Contig16.5.8 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig16.5.8
Unique NamemRNA_P-littoralis_Contig16.5.8
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A6H5KBP7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP7_9PHAE)

HSP 1 Score: 1168 bits (3022), Expect = 0.000e+0
Identity = 614/691 (88.86%), Postives = 644/691 (93.20%), Query Frame = 3 
Query: 1023 GVDDGRPTGYRYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELGR----------------------------SDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMKGQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDGKFVAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPXLXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLREGSDGSGGTGELVEFVQTLPGDSQKTDALFEVGSEVVQNLAERASKRFDGLISG 3011
            G D  RPTGY YGDVLTDADGLPLVYDSDSIGRYWDKRPGELN RW+KFLSVTVPFVTRV+RDYTSGNIMKNEA+LARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPT LAME+LE+ELGR                            SDGRAVA+K+QRPGL QEVTKDLYVLKRAVGVYQNLS RWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLS MKGQVFVP+VVL+LSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMR ERGRLALLDYGLMAELG++EREGMVSALIHTANRDYKSLIEDLVAL+VLP DTDRGQVEP+MKRVIGPYVFEGGGAKSLNYQSLA+DLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYS+DGKF+AKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTL+FLLA+EARPLR ALVGE SNAADLVLRR TRQAVVRAKDLLRPPPPX XXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAG++QGTVSD+PL  IRQLL+ GSDGSGG GELVEFV+TLPGDS+KT+A+F+VGSEVVQNLA+RASKRF+GL+SG
Sbjct:  204 GGDKARPTGYMYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNSRWSKFLSVTVPFVTRVVRDYTSGNIMKNEAVLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTPLAMEVLEQELGRPPSEVFSEISEEPIAAASLAQVYRGVLRSDGRAVAIKIQRPGLVQEVTKDLYVLKRAVGVYQNLSNRWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSGMKGQVFVPNVVLDLSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRDERGRLALLDYGLMAELGSKEREGMVSALIHTANRDYKSLIEDLVALDVLPADTDRGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDNPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASKRFNGLLSG 894
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A835YL56_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL56_9STRA)

HSP 1 Score: 649 bits (1675), Expect = 2.470e-201
Identity = 379/750 (50.53%), Postives = 482/750 (64.27%), Query Frame = 3 
Query: 1047 GYRYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQ-----------------DAVPPFPT-TLAMELLEEELGRSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVG--------------------VYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMKGQVF------------------VPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNML-LVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQ--------------------------------SLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSD---DGKFVAK----RLSVLLSYATG---VVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPXLXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLRE--GSDGSGGTGELVEFVQTLPGDSQKTDALFEVGSEVVQNLAERASKRF 2993
            GY YG   TD +GLPLVYD  +I +YWD RPGE+  RWT FL  TVPF+TR++R ++SG ++  E+ +ARDLRIVIE LGPTFIKLGQALSIRPDVIGPAAT ELAKLQ                   + P P  + ++  +   + RS+G AVAVK+QRPGL   VT+DLYV+KRAV                      YQ LSERWT Q TDY ELL+VWA GFY ELDFLNEANNQ RM+ VL+ +                       VP V  E +TRR+L++EW+DGVKLT+  P+E++ELT +AQEAFL QLL  GF H DPHPGN++ L D+S    +GRL L+D+GLMA L  ++ + MV+ALIHTAN+D+  L++DL+ L VLP DTDR +VEPIM+RVI PYVF+GGGAK+LNYQ                                SLA DLGRATLEIPFNIP YFAL+ARALGILEG+ALTGDPDY+IV+EAYP+VTR+I +DDSP L+RAL+DILYS    DG         RL+ LL+YA G     A    VFVDFD++PST A L++ + FLL D AR LR ALVGE+++A DLVLR++TR+ + R + LL+PPP  L         P PVP+ ++DALSP+L++EE++F  SL +L  AL G+D  + +    G    LLR+   +D S    EL+EF +T+  DS + DA      + + N  ER  +R+
Sbjct:   39 GYVYGAQKTDENGLPLVYDPLTIKKYWDSRPGEMTQRWTFFLGQTVPFITRLVRYFSSGQLLSRESEIARDLRIVIENLGPTFIKLGQALSIRPDVIGPAATAELAKLQAYLCIEKELGRPLDEVFSEIAPEPAGSASLAQVYRAVLRSNGEAVAVKIQRPGLLPIVTRDLYVMKRAVEWXXXXXXXXXXXXXXXXXXETYQGLSERWTKQTTDYRELLQVWANGFYMELDFLNEANNQARMRDVLADVSDAYVAXXXXXXXXXXXXXXXXXVPAVYHEFTTRRLLITEWIDGVKLTQVPPAEVKELTRVAQEAFLKQLLEVGFFHGDPHPGNLIRLSDQS----KGRLGLIDFGLMASLSKQDMDVMVNALIHTANKDFPRLVDDLIELNVLPPDTDRLKVEPIMRRVIAPYVFQGGGAKNLNYQVCTRAHHGSSAPKXXXXXXXXXXXXXXXXXXXSLAADLGRATLEIPFNIPSYFALVARALGILEGIALTGDPDYKIVLEAYPYVTRRITTDDSPLLRRALQDILYSGSTADGTAAPALSITRLANLLTYAMGNTDAAAGGGPVFVDFDSVPSTGAKLNEVMGFLLGDSARSLRKALVGEIASATDLVLRQTTRRGLSRLEALLQPPP--LPFLPRLPSLPLPVPKRLLDALSPQLSIEEEVFAKSLTDLGLALLGVDADSAAALDNGRPDVLLRKLLSTDNSSAQ-ELLEFARTVQADSPQFDA----HGKRILNPLERTERRY 777
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: D8LT20_ECTSI (Predicted unusual protein kinase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT20_ECTSI)

HSP 1 Score: 585 bits (1507), Expect = 4.640e-196
Identity = 314/343 (91.55%), Postives = 333/343 (97.08%), Query Frame = 3 
Query: 1986 ALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDGKFVAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPXLXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLREGSDGSGGTGELVEFVQTLPGDSQKTDALFEVGSEVVQNLAERASKRFDGLISGG 3014
            ALIHTANRDYKSLIEDLVAL+VLP DTDRGQVEP+MKRVIGPYVFEGGGAKSLNYQSLA+DL RATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYS+DGKF+AKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTL+FLLA+EARPLR ALVGE SNAADLVLRR TRQAVVRAKDLLRPPPPX XXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAG++QGTVSDDPL  IRQLL+ GSDGSGG GELVEFV+TLPGDS+KT+A+F+VGSEVVQNLA+RAS+RF+GL+SGG
Sbjct:    3 ALIHTANRDYKSLIEDLVALDVLPADTDRGQVEPVMKRVIGPYVFEGGGAKSLNYQSLARDLARATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSEDGKFLAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLQFLLAEEARPLRAALVGEASNAADLVLRRGTRQAVVRAKDLLRPPPPXXXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGIEQGTVSDDPLATIRQLLQAGSDGSGGAGELVEFVRTLPGDSEKTEAIFDVGSEVVQNLADRASERFNGLLSGG 345
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: D7FYF3_ECTSI (Predicted unusual protein kinase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF3_ECTSI)

HSP 1 Score: 514 bits (1324), Expect = 4.440e-166
Identity = 266/328 (81.10%), Postives = 277/328 (84.45%), Query Frame = 3 
Query: 1023 GVDDGRPTGYRYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELGRSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMKGQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTAN 2006
            G D  RPTGY YGDVLTDADGLPLVYDSDSIGRYWDKRPGELN RW+KFLSVTVPFVTRV+RDYTSGNIMKNEA+LARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPT LAME+LE ELGR      +   + P  A  +                      AQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLS MKGQVFVPDV+L+LSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMR ERGRLALLDYGLMAELG++EREGMV   I   N
Sbjct:  228 GGDKARPTGYMYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNSRWSKFLSVTVPFVTRVVRDYTSGNIMKNEAVLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTPLAMEVLERELGRPPSEVFSEISEEPIAAASL----------------------AQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSGMKGQVFVPDVLLDLSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRDERGRLALLDYGLMAELGSKEREGMVRDHIQETN 533
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A250XDH8_9CHLO (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XDH8_9CHLO)

HSP 1 Score: 523 bits (1348), Expect = 1.930e-165
Identity = 292/632 (46.20%), Postives = 391/632 (61.87%), Query Frame = 3 
Query: 1074 DADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELG----------------------------RSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMK---GQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDGKFVAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRP--------PPPXLXXXXXXXXXPFPVPESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLRE 2852
            D +GLPLVY+   I  +W  RPGE+ GRW +F +V+ P++T++      G + + E  LARD    +EKLGPTFIKLGQ LSIRPDV+ P+   ELAKLQD + PF    A  ++E++LG                            RS G  VAVKVQRPG    ++KDLYVL+RAVGVY+ +  R+TAQ TDY ELL  +A G Y ELDF NEA N +RM+++L   +     V +P   LE +TRRVL  +W++GVKLT   P EIR L  + Q AFL QLL  GF+H DPHPGN+L +      + G+LALLD+GL+AE+  ++RE MVSA IH ANRD+ SLI D + L  LP D +R  + P+M RV+GPY+  GGGAK+ N+ +L++DL   TLEIPF++PPY +L+AR++  LEG+AL GDPDY++V +AYPFV RKI+ +DS      LRDILY ++GK    R+S LL+ A G V++ S  FVDFD++P   A++ + L+FLL+ EA+ LR  LV ++ +  DL+LR   R+        L P        P P L           PVPE++ D L+P L  EE +FL SL EL+ +L GL      D     + QLLRE
Sbjct:  102 DEEGLPLVYNEKRIANFWGNRPGEMVGRWGRFTAVSAPWLTKLANAVIQGKVREREVELARDAVNNLEKLGPTFIKLGQILSIRPDVLPPSVMRELAKLQDRIEPFSNLEARAMIEKDLGKPIEEIFSEFSEKPIAAASLAQVYRARLRSTGDEVAVKVQRPGALSTISKDLYVLRRAVGVYEQIVRRFTAQTTDYQELLSTFAEGLYTELDFRNEALNGMRMRQLLDESEFKAADVVIPRPYLEYTTRRVLTMQWINGVKLTTLQPEEIRSLVKVGQAAFLTQLLEIGFIHGDPHPGNLLKITSGE--DEGKLALLDFGLVAEIPQQDREAMVSATIHLANRDWDSLIGDFIELGFLPRDCNRAVITPVMDRVLGPYL-RGGGAKAFNFSALSQDLLSVTLEIPFSVPPYMSLLARSVATLEGIALAGDPDYQMVTQAYPFVVRKILRNDSTGTGGLLRDILYDNEGKVKPTRMSALLNAALGYVSSKSEGFVDFDSIPDEGATVQEVLQFLLSPEAKDLRPLLVSQLVSGLDLLLRDRVRKLYNVTLPALVPRLPFFGAIPTPPLPPLLVPGLGFMPVPEAL-DLLAPPLAPEEGVFLNSLTELSASLTGLSLSDFEDPEPQRVIQLLRE 729
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: K8EHT4_9CHLO (Protein kinase domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EHT4_9CHLO)

HSP 1 Score: 522 bits (1345), Expect = 5.400e-164
Identity = 299/655 (45.65%), Postives = 409/655 (62.44%), Query Frame = 3 
Query: 1068 LTDADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGN---IMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELG----------------------------RSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQM-TDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMK--GQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLN-------------------YQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDD--GKFVAK--RLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLL-RPP------PPXLXXXXXXXXXP----------FPVPESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTV 2810
            L D DGLPLVY  ++I  YW K+ G L  RW +FL  +VPF+TRV      G    + KN A LA+D R +I++LGPT+IK GQ +S+RPDV+  AA +ELA LQD+V PF TT A+ ++E+ELG                            +S G  VAVKVQRPG+   V+KDLYVL+RA  VYQ + ER+  Q  TDY  LL  WA GFY ELDFLNEA NQ  ++K+L   +    V+VP+V  EL+TRRVLVSEW+DGVKL++ +PSEIREL  + QE FLVQLL  GF H DPHPGN++ ++++    +G+L +LD+GL+A +   +++ MV++++H AN+DY +L++D + L++LP D DR +V P+M + + PYV +GGGAK+                     +Q++ +DL     +IPF+IPPYFAL+ RA+  LEG+AL G+PDY++VMEAYPFV RK++SDD PA QRAL+++LY+    G  + K  RL+V+L+ A G+VA  S  FVD +TLP  AASL Q+LK++L   A  LR  LV E   AAD++ R++ R+ V RA  L+ RPP      PP           P          F  P  V+D  +PKLT EE++F  SL +L   L G +  TV
Sbjct:  152 LVDDDGLPLVYSPEAIQTYWKKQGGALQQRWLEFLKESVPFLTRVASLSLQGGSEELTKNGASLAKDAREIIQRLGPTYIKAGQMMSVRPDVLPQAALNELAILQDSVKPFATTDAISIIEKELGAPLGEFFEEISEQPVAAASLAQVYRAKLKSTGEFVAVKVQRPGILATVSKDLYVLRRAAEVYQGIIERFAPQQRTDYVALLNEWAIGFYTELDFLNEARNQDTLRKLLMEQEKVADVYVPEVNFELTTRRVLVSEWIDGVKLSECEPSEIRELVGVGQECFLVQLLQVGFFHSDPHPGNLMRMNDA---SKGKLCILDFGLVARINEEDQDAMVNSIVHLANKDYAALVDDFIDLKILPDDCDRAKVVPLMDKALSPYV-KGGGAKNYEAELKRMYNMDGSLSSTAGGFQAMTQDLLTVLNDIPFSIPPYFALLGRAVVTLEGIALLGNPDYKLVMEAYPFVARKLLSDDRPAAQRALQEVLYASTSAGGSILKGERLAVMLNSAMGIVAETSDTFVDLETLPEDAASLKQSLKYVLTPRAESLRKVLVKEAIAAADVLARQALRKTVTRAFALIPRPPSWLPFQPPNPEDIEGPILLPSRGNSTPVPAFASPRRVLDLTAPKLTREEELFAISLGDLVGGLVGKNAATV 802
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A836B1N9_9CHLO (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A836B1N9_9CHLO)

HSP 1 Score: 520 bits (1339), Expect = 1.480e-163
Identity = 311/697 (44.62%), Postives = 408/697 (58.54%), Query Frame = 3 
Query: 1074 DADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELG----------------------------RSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMK---GQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDG---------------KFVAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPXLXXXXXXXXXPFP---VPES-------VVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLREGSDGSGGTGELVEFVQTLPGDSQKTDALF--EVGSEVVQNLAERASKR 2990
            D DGLPLVY+ + I  YW  RPGEL GRWTKF +V+ P++T++     SG + ++ A LARD     EKLGPTFIKLGQ LSIRPDV+ P    EL+KLQD + PFPT  A  +LE ELG                            R  G+ VAVKVQRP     ++KDLYV++RAVGVY+ L +R+TAQ TDY  LL  +A G Y E+DF NEA N  RM ++L   +     V +P  ++EL+TRRVL  EWV GVKLT   P EIR L  + QEAFL QLL  GF H DPHPGN+L V E      G+LALLD+GL+AE+ A +R+ MV+A IH ANRD+ +LI+D VAL  LP + DR  + P+M RV+ PY+  GGGA + N+Q+L++DL  ATLEIPF++PPY +L+AR++  LEG+AL GDP Y +V +AYPFV RK++ +DS +    LRD+L   D                +  A+RL+ LL+ A G VA  +  FVDFD LP   AS+ +   FLL+ EAR LR  LVG VS+  DL+LR   R+A   A   L P  P +         P P   VP          V+ L+P L   E ++L  L ELA ++ G++   + D  L ++ QL    SD      EL   +  + G     + +   EV  EVV  LAE+ + R
Sbjct:  100 DEDGLPLVYNEERIAAYWGGRPGELAGRWTKFAAVSAPWLTKLANAVISGRLDRDRAALARDAVDNFEKLGPTFIKLGQILSIRPDVLPPDVLKELSKLQDRIEPFPTDQARAVLERELGAPVDEVFSEFSAKPIAAASLAQVYRARIRVTGQEVAVKVQRPQALGTISKDLYVMRRAVGVYEKLIKRFTAQTTDYQRLLSTFAEGLYTEMDFRNEALNASRMAQLLEESEFAAKDVIIPAPIMELTTRRVLTMEWVTGVKLTTLQPEEIRGLVKVGQEAFLTQLLEIGFFHGDPHPGNLLKVTEGPHA--GKLALLDFGLVAEIPAADRQAMVAATIHLANRDWDALIDDFVALGFLPPNPDRALIIPVMDRVLSPYL-RGGGAAAFNFQALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSSASALLRDLLLIRDAAGAGGADGGEAGSRQQLAARRLAALLNAALGYVADSAGGFVDFDALPEEGASVQEIASFLLSPEARELRPLLVGWVSDGLDLLLRDRLRKAYNLASASLTPRLPFIGSLPAALMPPPPPVWVPGKGLLPVGQAVELLAPPLEPSEQVYLQQLTELAASVLGVEPSALEDPSLNSLLQLASSPSDQ---VRELANVLGNVAGAGSGKNLMTATEVAVEVVDKLAEQQAGR 790
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A2V0PLP2_9CHLO (Protein kinase domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PLP2_9CHLO)

HSP 1 Score: 513 bits (1321), Expect = 5.360e-161
Identity = 296/686 (43.15%), Postives = 410/686 (59.77%), Query Frame = 3 
Query: 1074 DADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELGR----------------------------SDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVL----SSMKGQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDGKFVAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPXLXXXXXXXXXPFPVP---------------ESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLREGSDGSGGTGELVEFVQTLPGDSQKTDALFEVGSEVVQNLAERASKR 2990
            D +GLPLVY+   I  +W  RPGEL GRW +F  V+VP++T++   + SG +   +  LARD    + +LGPTF+KL Q LSIRPDV+ P    EL+++QD + PF T  A  ++E+ELGR                            + G+ VAVKVQRPG    ++KDLYVL+RAVGVY+ L +R+TAQ TDY +LL  +A G Y ELDF NEA N  RM+++L    S    ++ +P  +L+L+TRRVL  EWV GV+LT     EIR L  + QEAFLVQLL  GF+H DPHPGN+L V E    + G+LALLD+GL+AE+ A +R  MVSA IH ANRD+ +LI+D +ALE LP   DRG + P+M+RV+GPY+  GGGA+S N+Q+L++DL   TLEIPF++PPY +L+ARA+  LEG+AL GDP Y++V +AYPFV R+++ +DS      LR++L+   G+    RLS LL  A G VA  S  FVD D+LP   A+ S+ L+F+L+ EAR LR  LV  ++  ADL++R   R+A+  A  L  P  P L         P P+P               ++ VD  +P L  +E ++LASL EL   + G+    +    LG +  L    ++      EL   +  + GD   T A   V ++V   +A   + R
Sbjct:   84 DEEGLPLVYNEQRIAAFWSTRPGELAGRWARFAGVSVPWLTKLANAFISGQMEARQGDLARDAVDNVGRLGPTFVKLLQILSIRPDVLPPPVMAELSRVQDQMQPFSTVEARAMVEKELGRPISEVFSEFGAEPVGAASLAQVYRARVAATGQEVAVKVQRPGALSTISKDLYVLRRAVGVYERLVKRFTAQTTDYQQLLSTFAEGLYTELDFRNEALNAARMRELLDASDSGAGARIVIPAPLLDLTTRRVLTMEWVGGVRLTGLPAEEIRSLVGVGQEAFLVQLLEIGFIHGDPHPGNLLKVTEGP--DAGKLALLDFGLVAEVPAPDRAAMVSATIHLANRDWDALIDDFIALEFLPAGADRGLIIPVMERVLGPYL-RGGGARSFNFQALSQDLLSVTLEIPFSVPPYMSLLARAVATLEGIALLGDPQYQMVAQAYPFVARRVLRNDSSGAGALLREMLFDSQGQLRPARLSALLQAALGYVADKSEGFVDLDSLPEEGATTSEVLRFVLSPEARDLRPLLVSWLATGADLLIRDRARKALAAAPSLA-PRLPLLG--------PLPLPXXXXXXXXGLGLVPLDAAVDLFAPPLDAQEGVYLASLLELLAGVLGIPAAQIDSPDLGRLLGLF---TNPGAQARELAGALSAVAGDPGSTAAAAGVAADVADAVAATLAAR 754
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A7S3VU42_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VU42_DUNTE)

HSP 1 Score: 509 bits (1311), Expect = 3.190e-160
Identity = 296/680 (43.53%), Postives = 416/680 (61.18%), Query Frame = 3 
Query: 1074 DADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELG----------------------------RSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMK---GQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDGKFVAKRLSVLLSYATGVVA--ADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPP-PXLXXXXXXXXXPFPVP-------ESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQLLREGSDGSGGTGELVEFVQTLPGDSQKTDALFEVGSEVVQNLAERASKR 2990
            D +GLPLVY+   I  YW KRPG+L  RWT+F +V+ P++T++   + SG I + +  LA D    + +LGPTFIKLGQ LSIRPDV+ P    +L +LQD + PF    A  ++E++LG                            R     VAVKVQRP     ++KDLYVL+RAVGVYQ +  R+TAQ TDY ELL V+A G + E+DF NEA N +RM+++L S +     V +P   + L++RRV   EW+ GVKLT   P EIR    + QEAFL QLL  G+ H DPHPGN+L + E      G+LAL+D+GL+AE+ +++RE MVSA IH ANRD+ +L++D +ALE LP D+DR ++ P+M RV+ PY+  GGGA + N+ +L++DL   TLEIPF++PPY +LIAR++  LEG+AL+GDP Y++V +AYPFV RK++ +DS +    L+DIL+ +DGK    RL  LL+   G VA    SA F+D D +P   AS+S+ + FLL+ EAR LR  LV E+SN  DL LR   R+A      LL PP  P LXXXXXXXXXP  +P       +  V+ L+P L   E ++L SL EL   L G+    +      +I+ +L+  ++ S    E+ + + T+ G+    + +  +  +VV  LA +  +R
Sbjct:  106 DEEGLPLVYNEQKIAEYWSKRPGDLLRRWTRFTAVSAPWLTKLANAFLSGKIEERQTQLAADAVDNLTQLGPTFIKLGQILSIRPDVLPPPVMAQLGRLQDKIEPFSCEEAKAVVEKDLGKPIDEIFSEWGDKPIAAASLAQVYKAKLRGSDMQVAVKVQRPNALATISKDLYVLRRAVGVYQQIVSRFTAQTTDYQELLSVFAEGLFTEMDFRNEALNGLRMQELLDSSEFCSSDVVIPVSYMGLTSRRVHTMEWIQGVKLTTLPPEEIRSFVKVGQEAFLTQLLEIGYFHGDPHPGNLLKITEGPNA--GKLALIDFGLVAEIPSKDREAMVSATIHLANRDWDALVDDFIALEFLPRDSDRARIIPVMDRVLSPYL-RGGGAAAYNFSALSQDLLSVTLEIPFSVPPYMSLIARSVVTLEGIALSGDPQYQMVAQAYPFVVRKVLRNDSNSSMALLQDILFDNDGKVKPTRLGALLNAGLGYVADAKQSAGFIDIDAVPDDGASVSEVVAFLLSPEARELRPLLVREISNGLDLFLRDRFRKAYALLPGLLAPPRLPFLXXXXXXXXXPVFLPGIGLIAADEAVEKLAPPLNSAEQVYLVSLMELTANLLGVSVAELESPTASSIQGMLQMATNPSEQVQEIGDALNTMSGNRANLEVVQAIVLDVVNTLASKQEER 782
[Close]
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Match: A0A8J4CGD5_9CHLO (Protein kinase domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4CGD5_9CHLO)

HSP 1 Score: 511 bits (1316), Expect = 6.340e-160
Identity = 293/637 (46.00%), Postives = 383/637 (60.13%), Query Frame = 3 
Query: 1074 DADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPFVTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIGPAATDELAKLQDAVPPFPTTLAMELLEEELG----------------------------RSDGRAVAVKVQRPGLAQEVTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEANNQIRMKKVLSSMK---GQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEIRELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYGLMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPIMKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALGILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDD---------GKFVAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARPLRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPXLXXXXXXXXXPFPVP-------ESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQL 2843
            D DGLPLVY+ + I  YW  RPGEL GRWTKF +V+ P++T++     SG + ++ A LAR+    +E+LGPTFIKLGQ LSIRPDV+ P    ELAKLQD + PFPT  A  ++E+ELG                            R  G  VAVKVQRP     ++KDLYV++RAVGVY+ L +R+TAQ TDY  LL  +A G Y E+DF NEA N  RM ++L   +     + +P   ++L+TRRVL  EWV GVKLT   P EIR L  + QEAFL QLL  GF H DPHPGN+L V E      G+LALLD+GL+AE+  R+R+ MVSA IH ANRD+ +LI+D V L  LP D DR  + P+M RV+ PY+  GGGA + N+ +L++DL  ATLEIPF++PPY +L+AR++  LEG+AL GDP Y +V +AYPFV RK++ +DS      LRD+L   D          +  A+RL+ LL+ A G VA  S  FVDFD LP+  AS+ +   FLL+ EAR LR  LVG V    DL+LR   R+A   A   L P  P L         P  +P       +  VD L+P L   E ++L  L ELA ++ G++   +    L +I QL
Sbjct:  116 DEDGLPLVYNEERIASYWGGRPGELAGRWTKFAAVSAPWLTKLANAVLSGRLDRDRAALAREAVNNLERLGPTFIKLGQILSIRPDVLPPDVLRELAKLQDRIEPFPTDQARAVVEKELGAPLDQIFSEFSEKPIAAASLAQVYRARLRLTGEEVAVKVQRPQALATISKDLYVMRRAVGVYEKLVKRFTAQTTDYQRLLSTFAEGLYTEMDFRNEALNAARMAELLEQSEFASTDIVIPKPFMDLTTRRVLTMEWVTGVKLTTLSPGEIRGLVKVGQEAFLTQLLEIGFFHGDPHPGNLLKVTEGPHA--GKLALLDFGLVAEIPQRDRQAMVSATIHLANRDWSALIDDFVELGFLPPDPDRALIIPVMDRVLSPYL-RGGGAAAFNFSALSQDLLAATLEIPFSVPPYMSLLARSVATLEGIALAGDPQYAMVAQAYPFVARKVLRNDSSTASALLRDLLLIRDVATPGTEPGSQLAARRLAALLNAALGYVADSSQGFVDFDALPAEGASVQELATFLLSPEARELRPLLVGWVVGGLDLLLRDRLRKAYSLAAASLTPRLPFLGSLPAPPPPPLYLPGRGLVPMQQAVDLLAPPLEQGEQVYLQQLTELAASVLGVEPALLESPSLQSILQL 749
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig16.5.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBP7_9PHAE0.000e+088.86Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YL56_9STRA2.470e-20150.53Calcium-activated chloride channel-domain-containi... [more]
D8LT20_ECTSI4.640e-19691.55Predicted unusual protein kinase (ISS) n=1 Tax=Ect... [more]
D7FYF3_ECTSI4.440e-16681.10Predicted unusual protein kinase (ISS) n=1 Tax=Ect... [more]
A0A250XDH8_9CHLO1.930e-16546.20Protein kinase domain-containing protein n=1 Tax=C... [more]
K8EHT4_9CHLO5.400e-16445.65Protein kinase domain-containing protein n=1 Tax=B... [more]
A0A836B1N9_9CHLO1.480e-16344.62Protein kinase domain-containing protein n=2 Tax=C... [more]
A0A2V0PLP2_9CHLO5.360e-16143.15Protein kinase domain-containing protein n=1 Tax=R... [more]
A0A7S3VU42_DUNTE3.190e-16043.53Hypothetical protein (Fragment) n=1 Tax=Dunaliella... [more]
A0A8J4CGD5_9CHLO6.340e-16046.00Protein kinase domain-containing protein n=2 Tax=V... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig16contigP-littoralis_Contig16:10259..27145 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT20
PFAMsABC1
Model size3801
Max annot lvl2759|Eukaryota
KEGG koko:K08869
Hectar predicted targeting categorymitochondrion
Exons20
Evalue1.84e-200
EggNOG OGsCOG0661@1|root,KOG1235@2759|Eukaryota
Ec32 ortholog descriptionPredicted unusual protein kinase (ISS)
Ec32 orthologEc-08_003840.1
Descriptionregulation of tocopherol cyclase activity
Cds size2898
COG categoryE
BRITEko00000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789763.9177663-UTR-P-littoralis_Contig16:10258..109171680789763.9177663-UTR-P-littoralis_Contig16:10258..10917Pylaiella littoralis U1_48UTRP-littoralis_Contig16 10259..10917 -
1680789763.932272-UTR-P-littoralis_Contig16:11064..111681680789763.932272-UTR-P-littoralis_Contig16:11064..11168Pylaiella littoralis U1_48UTRP-littoralis_Contig16 11065..11168 -
1680789764.1420767-UTR-P-littoralis_Contig16:26302..263471680789764.1420767-UTR-P-littoralis_Contig16:26302..26347Pylaiella littoralis U1_48UTRP-littoralis_Contig16 26303..26347 -
1680789764.15259-UTR-P-littoralis_Contig16:27050..271451680789764.15259-UTR-P-littoralis_Contig16:27050..27145Pylaiella littoralis U1_48UTRP-littoralis_Contig16 27051..27145 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789763.941223-CDS-P-littoralis_Contig16:11168..112641680789763.941223-CDS-P-littoralis_Contig16:11168..11264Pylaiella littoralis U1_48CDSP-littoralis_Contig16 11169..11264 -
1680789763.954758-CDS-P-littoralis_Contig16:11833..118951680789763.954758-CDS-P-littoralis_Contig16:11833..11895Pylaiella littoralis U1_48CDSP-littoralis_Contig16 11834..11895 -
1680789763.9659753-CDS-P-littoralis_Contig16:12653..127891680789763.9659753-CDS-P-littoralis_Contig16:12653..12789Pylaiella littoralis U1_48CDSP-littoralis_Contig16 12654..12789 -
1680789763.9757266-CDS-P-littoralis_Contig16:13524..137041680789763.9757266-CDS-P-littoralis_Contig16:13524..13704Pylaiella littoralis U1_48CDSP-littoralis_Contig16 13525..13704 -
1680789763.9864876-CDS-P-littoralis_Contig16:14570..147601680789763.9864876-CDS-P-littoralis_Contig16:14570..14760Pylaiella littoralis U1_48CDSP-littoralis_Contig16 14571..14760 -
1680789763.9967997-CDS-P-littoralis_Contig16:15329..154531680789763.9967997-CDS-P-littoralis_Contig16:15329..15453Pylaiella littoralis U1_48CDSP-littoralis_Contig16 15330..15453 -
1680789764.0058255-CDS-P-littoralis_Contig16:16561..167331680789764.0058255-CDS-P-littoralis_Contig16:16561..16733Pylaiella littoralis U1_48CDSP-littoralis_Contig16 16562..16733 -
1680789764.0187924-CDS-P-littoralis_Contig16:17277..173761680789764.0187924-CDS-P-littoralis_Contig16:17277..17376Pylaiella littoralis U1_48CDSP-littoralis_Contig16 17278..17376 -
1680789764.0285146-CDS-P-littoralis_Contig16:18032..181401680789764.0285146-CDS-P-littoralis_Contig16:18032..18140Pylaiella littoralis U1_48CDSP-littoralis_Contig16 18033..18140 -
1680789764.037855-CDS-P-littoralis_Contig16:18481..185651680789764.037855-CDS-P-littoralis_Contig16:18481..18565Pylaiella littoralis U1_48CDSP-littoralis_Contig16 18482..18565 -
1680789764.047184-CDS-P-littoralis_Contig16:19477..196481680789764.047184-CDS-P-littoralis_Contig16:19477..19648Pylaiella littoralis U1_48CDSP-littoralis_Contig16 19478..19648 -
1680789764.0573077-CDS-P-littoralis_Contig16:20052..201161680789764.0573077-CDS-P-littoralis_Contig16:20052..20116Pylaiella littoralis U1_48CDSP-littoralis_Contig16 20053..20116 -
1680789764.069885-CDS-P-littoralis_Contig16:21068..211851680789764.069885-CDS-P-littoralis_Contig16:21068..21185Pylaiella littoralis U1_48CDSP-littoralis_Contig16 21069..21185 -
1680789764.07918-CDS-P-littoralis_Contig16:21871..219441680789764.07918-CDS-P-littoralis_Contig16:21871..21944Pylaiella littoralis U1_48CDSP-littoralis_Contig16 21872..21944 -
1680789764.0901961-CDS-P-littoralis_Contig16:23467..235281680789764.0901961-CDS-P-littoralis_Contig16:23467..23528Pylaiella littoralis U1_48CDSP-littoralis_Contig16 23468..23528 -
1680789764.1090813-CDS-P-littoralis_Contig16:23879..240351680789764.1090813-CDS-P-littoralis_Contig16:23879..24035Pylaiella littoralis U1_48CDSP-littoralis_Contig16 23880..24035 -
1680789764.1208122-CDS-P-littoralis_Contig16:24774..248651680789764.1208122-CDS-P-littoralis_Contig16:24774..24865Pylaiella littoralis U1_48CDSP-littoralis_Contig16 24775..24865 -
1680789764.1318955-CDS-P-littoralis_Contig16:25388..263021680789764.1318955-CDS-P-littoralis_Contig16:25388..26302Pylaiella littoralis U1_48CDSP-littoralis_Contig16 25389..26302 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig16.5.8prot_P-littoralis_Contig16.5.8Pylaiella littoralis U1_48polypeptideP-littoralis_Contig16 11169..26302 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig16.5.8

>prot_P-littoralis_Contig16.5.8 ID=prot_P-littoralis_Contig16.5.8|Name=mRNA_P-littoralis_Contig16.5.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=966bp
MRATPVLSAVALASCRGSGAMPATAAAAATASATAATARKHHHQPPPFSV
AAGDPARAHPSRNRRARRTRTGSRIRSSRSTGWKSSSRTGPLLFQSLSSS
SSWPAPSIPSPPSSFHSSSFKEAARTPRRSVAHSTSRAAIVNSNGVPRRG
PRASSHHPEEHQDAAAAPASTRQEQLPSMSWLSATGALGSRSIVGGGGGG
AAASTGKFGMSTRRERRPLTMMMMASSPVTDKEIMREFVSVAASEAASAV
KNKPPSAMLGGGKTTNRAAAGAPAAASTREVTGKGAGGAAAAAGGVDDGR
PTGYRYGDVLTDADGLPLVYDSDSIGRYWDKRPGELNGRWTKFLSVTVPF
VTRVIRDYTSGNIMKNEAMLARDLRIVIEKLGPTFIKLGQALSIRPDVIG
PAATDELAKLQDAVPPFPTTLAMELLEEELGRSDGRAVAVKVQRPGLAQE
VTKDLYVLKRAVGVYQNLSERWTAQMTDYNELLRVWATGFYQELDFLNEA
NNQIRMKKVLSSMKGQVFVPDVVLELSTRRVLVSEWVDGVKLTKADPSEI
RELTSIAQEAFLVQLLGEGFMHCDPHPGNMLLVDESMRGERGRLALLDYG
LMAELGAREREGMVSALIHTANRDYKSLIEDLVALEVLPGDTDRGQVEPI
MKRVIGPYVFEGGGAKSLNYQSLAKDLGRATLEIPFNIPPYFALIARALG
ILEGVALTGDPDYRIVMEAYPFVTRKIISDDSPALQRALRDILYSDDGKF
VAKRLSVLLSYATGVVAADSAVFVDFDTLPSTAASLSQTLKFLLADEARP
LRTALVGEVSNAADLVLRRSTRQAVVRAKDLLRPPPPPLPFLPRLPSLPF
PVPESVVDALSPKLTVEEDIFLASLEELAYALAGLDQGTVSDDPLGAIRQ
LLREGSDGSGGTGELVEFVQTLPGDSQKTDALFEVGSEVVQNLAERASKR
FDGLISGGGRGGGAK*
back to top

mRNA from alignment at P-littoralis_Contig16:10259..27145-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig16.5.8 ID=mRNA_P-littoralis_Contig16.5.8|Name=mRNA_P-littoralis_Contig16.5.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=16887bp|location=Sequence derived from alignment at P-littoralis_Contig16:10259..27145- (Pylaiella littoralis U1_48)
CGGGACTTTGCTCGACCTCCGTGTTGATTTTACCTCGCAGCATCAGAGTC
AAGCCCCAGCCTGTTGATTACGTTCTAACAAGAGGTGACCATCAGGTATG
GTTCTTGGCGCGAGAATGAGGTCTCCCTTCTATATGGTTTCACTTTTTCG
AGTCTAGGTGTCTAGCGTCCGCTGCGTCGTGACCGAATTTCACAGCAGTA
GTAGTCCCCCTTTGTTTGTTTCCTGTTACAGACAGGATGATATTGTCTTG
TCTCATCTCATGCATGTGTGTGTGTGTGCGTGTGTGTGCGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTCAGTTCATGATCATCCTCTATTTCTAC
GCAGGCACTTTTCGAGGAACTCCCCCATCCGACAGGGCAACCCTTCATGC
CTTCGCTTTTCGTGCGTTGATACGCACAATTATGTTGAAAAACGTAACCG
CAAGACGCGTGAGAGCAGAGCAAGGGATGAGAGCACAGTCCTGTCGAACG
CCAACGTTTCCTTGCAGAGCGAACAACCGACGCGTGATAAGGATATCTTG
TTGTTTATCCCTCTCATGTGTGGAGCGGGTGTAAGCCTGACGCAGCTCGC
GGCGACCGCTTCGAGTGTCTCGAAAGCGACTCTGACGTAACGTAACTTTC
CACCTTGGTTGTCGAGTATATCCGACAGCAGTAGCAGACCACGCTACTGA
AATAACTACCTCTGCACTGAGCACTTGAATACGATCAGTTGAAACGTCCC
CGATCTTACCTCACCTGCCCACTGCGTGCCCCTTGCGTTTACCTCTAGAC
ATACAGGGCGGCAAATCCTTAAGTAAATCAGACGTCCTCGACGATGCGAG
CCACCCCAGTCCTGTCCGCCGTCGCACTGGCGTCTTGCCGCGGCAGCGGT
GCGATGCCGGCGACCGCAGCCGCAGCAGCGACCGCATCCGCAACAGCGGC
AACGGCGAGAAAGCATCACCACCAACCGCCACCGTTTTCAGTGGCGGCGG
GTGACCCAGCTCGAGCGCACCCGTCACGTAATAGAAGAGCACGAAGGACA
AGAACTGGGAGCCGAATACGCAGCAGCAGGAGCACTGGCTGGAAGAGCAG
TAGCCGAACCGGTCCTCTCTTGTTTCAGAGCTTGTCGTCATCGTCGTCGT
GGCCGGCGCCATCGATCCCATCCCCGCCCTCATCCTTTCACTCGTCCTCG
TTCAAGGAGGCGGCACGAACACCGAGAAGAAGCGTCGCCCATTCCACTAG
CCGTGCCGCAATTGTAAATAGCAACGGCGTCCCGCGACGGGGGCCAAGAG
CTTCGTCGCATCACCCGGAGGAGCATCAAGATGCGGCGGCGGCACCAGCA
TCAACACGTCAGGAGCAGCTGCCGTCGATGTCTTGGCTTTCAGCAACAGG
TGCGCTCGGGAGCAGGAGCATAGTTGGCGGCGGCGGCGGCGGCGCCGCCG
CCTCTACCGGAAAGTTTGGGATGTCGACCCGGAGAGAAAGACGTCCGTTG
ACGATGATGATGATGGCCTCCTCCCCGGTAACGGACAAAGAGATCATGAG
GGAGTTCGTCTCGGTGGCCGCTTCGGAGGCGGCCTCCGCGGTTAAGAACA
AGCCGCCGTCAGCGATGCTAGGCGGGGGCAAAACTACCAACAGGGCCGCC
GCCGGCGCCCCTGCTGCTGCTTCCACCCGAGAGGTGACGGGGAAGGGTGC
TGGAGGGGCGGCCGCGGCAGCGGGAGGGGTCGACGACGGTCGTCCGACGG
GATATAGGTATTACTTGCAAAGTTCTTTGCCTCGTTCGGTGTAAGCTTGT
GTGGTGTACCGGTAGTACCTGGTACGTATATACAGTTGTGGGAACTGCTT
TATTTTTCCAATATTTTTTGTTTGCGCACACGTTTACTTTTCTGTTGCAC
CATTACCAAGTTTCACATACAGGGAGGGAGCACACACCCCAAGGTGCCGT
GTATACCGCCGTCTAATAGTGCACGAGTCTTGTAAACTCCGGCTCTGTAA
GCCTCATTCATGAGCATCCCCGTCGAGAAATTCATCGCGCCCGTGACGTA
AAGGGACTCGAGCTCCGGGACAAAAAATGAAAGATGAACCGAAAACTCTA
AAAATATTCGTGTGACCTATCGGGGGCTCCGTAGTTTGTATGCACGCACT
CCCCCTTTACCCTCCTGCGGAAATAGCTTTTGCTTCTAGGGCGCTTAGCC
GCACGTGCATGTGGCCGTCCCTTGAAAGTAACCTCCCTCTGTTCCTTTTT
GCGGACGCCCTTTTCCCCTGTGTAAACCAGGTACGGAGATGTGCTGACGG
ATGCTGACGGCCTGCCGCTGGTGTACGACAGCGACTCTATCGGCCGCTAT
TGGGACAAGCGGCCCGGCGAGGTGCTTGTGTACTTGTATGTAGTGCACTG
ATCATTTTTGAAACAAAAGGCCCCGAGAAGTCGCCACTTACCACTTTATC
TCGACGACACTGATCTGCACCAGAAATCAGGCGCTATGTAACTGCCACCA
GTTTTATCTCATCCTTGTACTTGTACTCTACCTTGTTTGCCACCGTGCGT
GTGCCCGTCGTGGCCGCGATTCGTCTCGAGAAGCCCATGCCGACCGAGGC
ATATAAGCATTCTGCGGAGAGCACACCCTTCCCCTTCAACACGGGGTTGA
GTGAACTGTTGTGGTACACTGGGATTGTGTTGCACAAGACCGGCCTTTTT
TAACGCTCGCTTTAAAAATCAACCTTGACTTCCTTCGCTACACCTGGCTC
CCTGCTGCGTTTTTTTTTCTTCCATCTGCGTCGGTTTGTTTTGTGTCTAA
AATACTGCCTCGTCGTGAGTTCGGCTTTCAGCATGCGTAAAGGACGAGCA
GCTTTGAGAACTGCTCCGCAGGCTCCGCAGGCGCGGAAACCCAATTTTGT
TTTCCCCATGTAATGTTTTCACTCTCTGCCGTATCTCAGTGATGTCGGGG
ACTGCTGTGGCTCACATCTTTGTTTATTCCAGCTGAACGGGAGGTGGACC
AAGTTTCTTTCGCTCATGGTTTTCATCCACGTTTCTGAGCTGGGTGCCGT
AATTCACTTTCAAATCTTGTTCCTCGTATCGATACGCGCGTGTGCTGCCT
TTCGTCTCAGCTGAACGGGAGGTGGACCAAGTTTCTGTCGGTGACGGTGC
CCTTCGTGACAAGGGTCATCAGGGACTACACCTCCGGGAACATCATGAAG
AATGAGGCTATGCTAGCGCGCGACCTGCGCATCGTCATCGAGAAGCTGGG
GCCGACGTTCATCAAGGTAGGGGTTACCGCAGGCTTGAGGCTACGTTTCA
GGATATTTCACAGTAAAAATGTTTCGAAGTGAGAGCTTTTTTCGTCAACA
TTGATTTTGATTTTGATGTTGATGTTGATGTTGACGCTTTCGATTACGTC
AGAAACAGTAGATCTCATGTTTCATGGCAGCACGATGTGGCAGTCATCCG
CTCAAAACCGATCAAAGGGAGTCGAGAGAATATGCGCGGCCTATCATACT
TTCTTGCATTCCTCTCCGTCTTCCTCGTCCTCGTCCTCTTCGTCTTCTCT
CGCCAATCATCACGCACAAAATTTGCTGCTGCTCCAACTTTTTCGATCCG
GTTTTCGTGTCGTGCAGCTGGGGCAGGCGCTTTCTATTCGCCCGGACGTT
ATCGGACCCGCGGCCACTGACGAGCTAGGTGGGTGCATGCGTGAGATAGA
CAAGACAGAACCCACCGTGTTTTGGCGTGTGCATCCGTGTCTGTGCGTGT
GTTTGTGCGTGCAAACACTAAGAGGGGCGACGTACCTGTCTGCCCGGTTC
CTCGGGTGCCGCTGAGTGCACGCACGATTCCGGGATTTCAACTGGCGGGT
ACGGCACACGATACACGGTGCCGCTTTCTACACATGATGGGACGAGTACT
TCCGTGACTGTTTTTTGTTCGACCATACGAAGAGGAGCGGGGCGGCGGGG
GGTGATCTCTTTTTTTTCTGGTCTCATGGTTGATTGATGCCGTTGAGGTA
GAGAAAGATGCGAGGTGATTCAGTTATGTCATCATTTTATGTGTTCGTCT
AGTTGTGAGTGTGCACCCCGGCCTTCAGCCAACGCCGACGTACACAGCGT
AACCCAGCTGAGTGCGACAATCGCCACACCGACACTCGACAAAAGTCGCA
GCGTGGTTCGGACGGCCACCAGACACAGGTAGAATCGGTGCCCGCAGTTT
TGTGATCGGGTAATTTTACGAAGAAATATAACTCGACCCTTCCTTCACCC
CCCCCCCCCCCCGCCAAGAACGGCTTCATCAACGTCTCCCCCAACGCAAA
GGATGCATTCGACCCATCAAACCCTTGAAAAAATCTTTCCCGCTGTAACG
TACACTTATCCACACGCATTTGTACGTTCATGTATGGAAACATACGACTT
CGTTGTAACACCGGTCGCCCCGGTGGTCTAGTTTTTCCCTCGTTAACCTA
TTAGTTGTCAGGTGGTAGGTTCTATCCTCTCTGAGAGCATTTCTTGCGAC
TTTACAGCGTGTCTGTTGTCATCCCATTTATTTTGGGCATCAGTCTACAC
ATTTCGGTATGGAGTGGGTGCGTCAGCCGGGGTCAGTGGAAAAGCGAAAT
ACCATAATCATGCGAGTCATCACACCCCCGTGTCAACTTTTTTGCATTCC
GTATTGTTCCATAACCAGGAGAGAGCGAACACCAAACGACCCGTCATACG
AAAGCTCTCGACGAGATCTTTCCAAAACTCCCCTTTTCGGCAGTGATACT
CTCCTGGTTGTGGATCAATACGGAATGCAAAAAAGCTAACACGGGGGTGC
GATGACTCGCATGATTACAGTACTCGTGAGTAAACTGAGGGAAGGGGTTG
CTGTACCCGACTCGCATTAAATACCAAAGGCACGTGTCGCAGGAGGAAGG
TTCGGGCAACAAAACAAAATAAAACGCAAAAAAGCTTGTGCGCAACCTTC
CTTCTGTGTGACTCCGGCTGACGCACCGACTTCATACCGAAAGGTGTAGA
CTGCTGCCCATATTAAACGGGATGACAACACACACACATTAGTTGGATGT
GTATTTGATCGCTTTTTGAAATCGATCAGACTCTCGCTTCGTGGGCCGAA
CGTAAACGTGATGCAAACGTATGCATAGCTCCACACGTATATCTAATGAC
AATGGCGTTGTTACCTCATCTGTGTGTCTTTTTTTCACAAATTTTTCAAA
GCCAAGTTGCAGGACGCCGTTCCCCCGTTCCCGACCACGCTGGCCATGGA
GCTGTTGGAGGAGGAGCTCGGCCGGCCCCCGTCGGAGGTCTTCAGCGAGC
TCAGCGAGGAGCCCATTGCCGCTGCATCCTTGGCACAGGTCCGCACGTGC
AATATCGCGTCAGTGTCAAAATATACGAAGTACGTTTTTTTCTTTTCTCT
GGTCTAGCGAGGAACATGAGTGTTGCTGTTGATTCTCACATTGGCGCACC
ACCCAAGTCTAGCCCGTGCACACAAACCAGACACATATCGTGCTCGGAGG
ATAAAAAAAAAAAAACGAAATCAACGACGGTCACACCCAAACAAAATCAG
AGCAAGTACCGCCGAGACACCTTCTGTGATGGCCAAAGTTAAAACGTACA
CAAACACAGGTTCGAAAAAAATTCAAAAATTGGAAAAAAACGAACAATAC
CAAGACAAGCCATGCAGTGCGGGTGATTCGAAGCACGGCCGTGTTTGTTT
GAAAGTTCAGCACCTTTTCGATCACATCACGATTTTGGGGTGTTCCGAGA
GCGAGTGAATTTGATGTCGCTACTCGAACAAATGCAGCACCCGCTACCGT
GACTGATGAAATGGAAGCAGCAGTAGTGAAGGCCGTGCCGCACGCGCGCA
CACACACACACACATACACACACAAACACACACACATACACAAAAAAAAA
AAAAACACACACACGCCCAACTCAATACTCCTTGCTCCAGGTGTACAGAG
GAGTTCTGAGATCGGACGGGCGTGCCGTTGCCGTTAAGGTTCAGCGGCCG
GGCCTAGCGCAGGAGGTGACCAAGGACCTGTACGTCCTCAAGAGGGCGGT
GGGGGTGTACCAGAACCTGTCCGAGAGGTGAGAGCGTGGAGCACGAGGGC
GGGCGAAGGCGCGAGCAAGCAAGCCAGCGAGCAAGCGAGCCAGCAAAAAC
TCATTTTTTTTTTCCCATGTTTTTAAGAGTATTTTTTCTCGGTTGGTTTT
GCGGCACGGTTTCCCTTTTCGGGGGGTGGGCTATGGGGTTAGCCTCCCCC
CCTGGTTAGCCCCCCCGTGACCTTTGATCGCGTGTCGGTGTAATATATGC
AAACTTTTTTTTTTGTTTTTTCGTCAGTGATCTGCCCGCCACCATCTAAC
TTTGTAGTACTTTGACCGTACAATGGAGTGTTTTCTAGTCGTCATGCTCG
CTTGAGGGAAAAGGGAGGGAATACAACATACGCAGGCGGTGGAGATGAAA
TAGAAAACACTCGGTCGATTTCTTATTTTTTTCTATTTTGGAAAGAGATT
CGGGTACGTTGCCGGTGTTCCTGAAGATACTTGGTCGAGTGGTGATTTTT
TTTTTTTTTTGGGCTAGAACCTGCACGGACGTGCGTGACCTTCCAGACAG
CGCGGAAGTATGCTCCGTTGCATGTACTGGACGGGTTTTTTTTCCCGCCC
GCCCCCTGTTTCCACAATTCTGCATGATGTTCGATACCAAATGAAACCCG
GCTCCACTGCTTGTCATTAGCGCCGTTTACTATCGCACCATTATTTCTAC
CGTCGTTTTCGTTCCAAATGTTTTGAATGTTTTGAATGTTTTGAAGAGTT
TCATGTGATTGTCCACATAGCAGGAAAACGGGGGTATTTACCCTGTGGTT
CTTGAATGCTGGCCGGCATGTGTGCTACTCTCCTACGGTTCACGATCCTC
TCGTCTCTTGATGGGTATACCCTCATTGTGTGCTCGTCCCTTGCGTGGGA
ATTGTAGAATCTGTTATGAGCTAGGAGTACTTTTTTTTTGTTTTCGATTT
TCGCATCTCGCTTCTTTTCCTTTCTTTAGGTGGACGGCCCAGATGACGGA
TTACAACGAGCTGCTTCGCGTGTGGGCGACGGGTTTCTATCAGGTTGGCA
TGTCTTGCTATCCCATCATACCAATAGCGCGACGTAGCGAAGGTGGCACT
TTGAACACGGGCTGCTCTGCCGAGCGAGTGCCGGTTTCATTGTTTCGCAT
TTTTTTGCTGGTGTACGAGCGTGTCGAAACAGAGGACGAGGGACGACACG
AAGATTTATCGGATTTTCCTTGCACAAGCCGAACATGTCTGCACATTCCT
TTCACTCTCATTTTTCATTCAAAACCTCTATCGAGTGTTTTCGGGGCACC
TGGATGTTGGCTGGACATGAAAGTTCAAGAGAGTGGCCCCCGCGAGTTTT
TCGTGCCCCCCTCCCCCCCAGCGCACTTACTCACTCAATCACTCACTGAC
TCACTCACTCATTTACTCATGTTTTTTTTTTTTTTCCTCTCGGGCAGGAA
CTTGATTTCTTGAACGAGGCGAACAATCAGATCCGCATGAAGAAGGTACT
GTCGAGCATGAAGGGGCAGGTGTTCGTGCCGGACGTCGTCCTCGAGCTGT
CGACGAGAAGAGTGCTCGTCAGCGAGTGGGTCGATGGTGTCAAGCTGACC
AAGGCGGACCCTAGCGAGGTATATACATGCACGGCGGTGTTGGATATCCA
CTCTTGCGGCATGCCTGACGTGATGTACTTCGAAGTATGATGATACCCGG
TAGATCATAATACACACTGGGTACAGCAGTACGACTGAAGAAACGCTACA
AGTATTTCCTGATGTGTTTGTTTTTGTGTTTTGCACTGACTGACCCGTGG
TGGTTTTGATCTTTACACGTTGGCATGCGTCTGTTTTTTTTTTCCCACGC
TTCGAAGCATATTTTACTACGTGTTGATGAAGCCCGCGCGTGCGTGCCTG
TTGTTCGTTAAACGCAGACTTTGTTGTGTCCCCGTCCCGTGATTACGTGC
TGTGTTGTCGTCTAGAAAAACTATGGTATGATTTTGTGTGCCCGTGTAGA
CTATTTTGGGTACCCCCCTCCTTGAACCATCGGGTTTCTTTACCGTTTTT
TTTTTATAAATGTTTTCGCCCCGAGAACGGATGCCGCAAAACAAAATTGT
GACACATCGCTGTGCTCGCACGCCGAGCGAGGGCTATCAAATGAAGCAGT
AGGCCGTGGTGGCTCGATACGCTAGGCTCCAGGATAAAGGGGTCTTCATG
GGTTCCGAAACCAGCGAGGAACGTAAGCGTAGATCTTAATGCGGGTACCG
TGAACATGGAATGACTCTGAACATCAACACGAAATACTCTCCCATTTCTT
TCGCTTCATTTTTTTCGCGATTGCAGGACGGACAGCATCACGCCAAAACA
GAACCAGAGATTTTTTTCTCAATTTTCTTGCAATTTTCCGAGTCCTGCCT
TTTGTGCCATACAGCACCTATTACGAAGAAATGAGTGCGATGTGTCGTAC
AAAGTGTACGTTTTGTGTCCCGCCCCCTACCGACCGAATTTTTGTTTTTC
GCGCTTGGTGGCTGTTTTTTTTTGAGTCAGATCCGCGAGCTTACCAGCAT
CGCCCAGGAAGCGTTTCTGGTGCAGCTGCTCGGGGAGGGGTTCATGCACT
GCGACCCGCACCCGGTGTGTGTTGCTGTTTTTTGTTGTTTTTTTGTTGTT
ACTTTATTTGTTATGTCTATTGTTGTTGTTGTTGTCGTTGTTGATAATGA
TGTTGTTAATGTTGTTGCTGTTGCCGCTGTTGTTGCCGTTTGTTGGGTTT
TTGCATTCTGCGGTCTCACGAATGACTGAGCAACCGCGCGTGCGGCTTCA
CAATTATCATGCCGCCTTCTTTTATACTCCGATACCATTCACCACCAGGC
ACGTCTTTGTTGTTGTTTCTTACAACATTTCCCGTGTAGATTGTCATCAA
AGCAGGCACCGGCCCACACTCCTTCTTTTCGATCGTGCCCTTCGGTTTTG
CACAGGGGAACATGCTGCTGGTGGATGAGAGCATGCGCGGCGAGCGAGGA
AGATTGGCCCTGCTGGACTACGGACTCATGGCGGAGCTCGGCGCTAGGGA
GAGGGAAGGGATGGTGAGGAGGGGTGAAGGGAGGGGGGGTAGGGAGGGAG
GGGGGGGAGAGAGGGAGGGAGGGAGGGGAGGGAGGGAGGGGAGGGAGGGA
GGGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGGAGAGACTGG
CCGATAATCACCGACAGATTTGAAGCCAAATCGACAGAGCGTGTTTAGAG
AGGGGTGGTAGTAAAGATAAAAACGAAAGAGAGAGAGAAAAAGAGGGGGA
GACGGAGAGAGAGGCAAAGAGGGAAAGAAACGGTGGGTTGGAAGAGGTAC
GATTATAATTTATTCGGCGTCGGGGCACAGAGGAAAGGTATAAAACGGGC
GAGAGGGCTGGCAAGACGAGACACAGGTACCAACTCCGCCAGCACTGATT
CCGGATGAACAACAAGACCACAACACACCGGGAAATCCTCAAGAGCCTTT
CGTGTCCCTCGCTGCCTCCCTCTTCCTCTCTCTCTCCCCCTCCTTTCGCT
GCATCCCGGTTTTGTCGCCTCGACGGTTGTGGCCACGGGGCCACTTTTGA
GTGTTTGCGCGTTATTCTGGTGTGGTTCTATACACGAACACACGTTTTAT
TTACCCGCATGTGTTCTTTCCCCCCCCTATTTTTACGTTTTCCCCGTGTG
CGAACGCGTTCGCGGCAAGGTGAGCGCGTTGATCCACACCGCCAACCGGG
ACTACAAGTCGCTCATCGAGGACCTGGTGGCCCTGGAGGTGCTCCCCGGG
GACACGGACCGCGGGCAGGTCAGACAGACAGCTCAAGACAGCGTTTGATT
GGGCCGCAATACTTTTAATTTTGTCTCTCCATAATCAACCACACGTAATT
TTCGTTGATTTGTGTGTGTTGAAGAGGTGGTTTTTCTGCACGTTTGAGAG
GTGTCTCGTAGCCCTTAGCCGAGGAAATCGTCAACTTTTTACCCCGGTGG
CTGAGCGGGCTACTCCATCACACGTGTGTGTGTGCGTGCGTGTTGTGTGT
GATGCTGCTTTTTTTTGGTGATGTCTGTGATGTTTTCCGGCTATCATTCT
GAAATTCCATCCCTGACCAGGGTGTACGTGTACACATGAGCAGAAGGGGC
GGCATGCTCCGCGTTAACTATCGCGAGGGCACGTTCTTACGACAAAAGCC
GAAAATGGGTTGCATCGTCGTATCATGTCATACAGCATAACCACCGACAA
CAACAAACAACGACGACAACAACAACAACAACAGCAGCAAGCAACAAACG
ACAAACAACAACAACAAACAACAAACAACAAACGACAACAACGACAACGA
CAACGACAACAGGTGGAGCCCATCATGAAGAGAGTGATCGGGCCCTACGT
TTTCGAGGGCGGCGGGGCCAAGAGCCTCAACTACCAGAGCCTCGCCAAGG
ACCTGGGCCGGGCCACGCTCGAGATCCCCTTCAACATTCCTCCCTACTTC
GCGCTCATCGCGAGGGCCTTGGGAATCCTCGAAGGTATGGACGTGTGTCC
CGCGTTCGGGTTGTCCCTCCTCCGTGCATGTATGTACCTACATGACGCGG
CTCGTGTTTTTGGTGTGTTGTTCAGAGAGGGTTCTGGATCGTGTTGCAGG
TGCTTTGAAATTTCGAGAGAAGTTGGTGCATGGTAAGAACAAAGCATGAT
GTGTGGGGTGCAGGGCTCTCGTGCCTCTCCCGTTGTGTTCGTGCCGTGGA
ACGGCGTCGTCTTGGTGTGTGTTTTATTCAAGGGATTCTGGACCCTTTGC
TGTGTGCCTGGCAGTAATAATGCCAAAAGTGAACTTGAGTGTGGACGTGG
ACGTTCCTTCGGTGTGCACGCGAGAAAGGGAGAGAGCTAGCTGCGGCGGG
CCACTTCTTTCTGGGCGTCGTGTAGCCCGCCCCCTTGTATACTTGATGCG
GCGGGCAGAGGTAGGTGTACATAACCTCTGGGACAACGGCGGCGGGGGAA
GTTGGTGCGAAAAACCAAGTTCGTTTCCCGGCGAGAGGATGTGACGGTAG
CTCATGGACTGTGACGATAGACCATGCTGCCTACACTACCGGCCGCCCTG
TGGTTCAGCGGGAAGCCTCGAAGCCTATTACATCTGACTCCTTCTGGATA
TCACGAGTTCGAATCCCGGTCGGGTTTTTTTCTCGCGTAGATCTAGGAGT
GTGAGTCGAATACTTTCGTGAGGACAGCGGCACACAAAAAACAAAATTCG
ACCTTAAAAAAAAACTCAAGATGTCAACGAGACCCAAAATGAGGGCTGTA
CAAGTATATACCCTTCTCGCGATAAAAACGAAAACAACTTCATTATTTTT
TGTTCTTGCTGACCCTGACGGAAAAAAAAAAGTCAACGGCGGAAAAGGGC
GGGCTGTTCGTGTGATACCCTTCCCTCGAAGAGACAAGCACCGCACAAGT
CTGTGATGACAGTTGTCCTTGCTGACCCTAACTTGGTTCCGGACACGTAT
TCCTCGAGGTGTAGTAGACTGGGAACACACACGCACACAGGCACACAGAC
ACACACACTCACACACACACACACACACGCACACACAACTGTGTGTGTAA
CCCGCTGTAACAGAACCCCTGGTGTAACTGACGACTTCCCAGGCGTGGCG
CTCACCGGCGACCCGGACTACCGCATCGTGATGGAGGCGTACCCTTTCGT
AACCCGCAAGATCATTTCGGATGACTCTCCCGCCCTGCAGAGGGCTCTAA
GAGACATCTTGTACAGGTACGACACGATACTACACTACACCACCACACCA
CACACCTTTTCCTCCGAGCACGATATGGGTCTGGTTTGTGACGACGGGCT
AGACTTTGGTGGTGGATAGCTCACGTGAGAATTAACAACAACGAGTCAAT
TCGGGGTAGACTTTGGTGGATAGCTCACGTGAGAATTAACAACAACAACG
CGTCACTTCGGGCTAGACTTCGGTGGATAGCTCAAAGGTGAGAATTGACA
ACAACAACGCGTCACTGCCGGGAGACGGAACGTATGATGAATTACACTCG
GCCGACACTCTTAGACAACCAACCAGCTGCTACTGCAGCAGCAACAGCAG
CAACAGCTCTCTGCCGTGACGATGACGACCGGAGTGCAATAAAAACACGA
TGCTCATCGTCCTGTGCAACAAACAATGACCGATGCTTTCTGCTCGGCTT
TTTTTCTTTTTTCTTTTTTCATGATTCGTGCTCTTTTTCATGTTACGTTT
CGGAATTTGTACAATTGGCAACACAATATTCCCACCTCCCCCCCCCCCCC
GCCCCCCATCACACACAAATATACGCACGCGACAGCGACGACGGCAAGTT
CGTGGCAAAGCGACTGTCGGTGCTGCTGAGCTACGCCACCGGGGTGGTCG
CGGCGGACTCCGCCGTGTTCGTGGACTTCGACACGCTTCCCTCCACGGCG
GCATCCCTGAGCCAAACGCTCAAGTTCCTGCTCGCGGATGAGGCGCGGCC
GCTCAGAACGGCTCTCGTTGGCGAGGTAAATGCCTCTTTATATAATTCGA
AGTACATGAAATCCTGTTGCTCTGTAGGTATATCGGAGCGTTAAGGGTGG
GTGTTAATCATGTTTGTATCGCTCCTTGCTTTGTCGCGTTTTTTTTTACC
CCTGAGAAAAATGTCCCTGCCCGCAGGTGGCTCACGGTGGGTATGATTTT
TTGTATCCCCCCCCTCCGTTGGGTTGACTCCAGGCACCTTACGATTTCTG
TTATTATGGCCACCACTATCGTGACCACAAACCATCATCATCATCATCAT
CATAATCATGTCCACCACCACCACCAATGGAATCTATACCAACTCGTCGT
CGTCGTCGTCGTCGCCCTCGTGCACCTTAACAGTTTGGCGGACGAAGGGC
CGACTTGCGTCTGGCCCGACTTGGCTGAAGGGGTGTCTCCTGCTGACACA
CGGTCCACGAGTTTCTACGCCACATGCATGCGCTTCCTGCTGTAACGGGC
TCGCACCCATCGTCCCCAAGCGGTCGAACTCCCGCTCTGACCCCATACAC
AACTGTAGCACCAACCACAGACATCGTGAAGCCAACAAAAAAACGCCGTG
ATGTGTTACGCCCTCCATCATACTGTACGCATAATTTTTCAGCCTGAATT
TTCGCTCTCACTCCAACTCCAACTCCAATTCCAACCCCAACTCCATCTCC
AAGTCCGCCCCAACCCCCAGCCAATGAGACGCGCTTCGAAAGCTGCGGAC
CAGGTTCGTGCTCGACAAATCAGTGCACCCCCCAAAGCTGCGCGAATGCA
CCACCCAACAAACACTCCCTGACCTGTCGAACAACCCCAACCCAACCCTT
CAACAAACAACCCTATATACGAACAACATGATACATCACAGGTTTCGAAC
GCGGCGGACCTGGTGCTGAGGAGGAGCACGAGGCAGGCGGTGGTGAGAGC
GAAGGATCTCCTCCGGCCGCCCCCGCCCCCTCTCCCCTTCCTGCCGCGGC
TGCCGTCCCTCCCATTTCCCGTGCCGGAGTCAGTGGTGGACGCGCTCAGC
CCAAAGCTCACGGTCGAAGAGGTGAGTTTCTTTTTCATCTGTGGGAGCCG
GACATCGGCCGGTGGAAAAATCAGCTGCTCAGGTAGGTAGCTCAAAGGAC
CACCACCAACGTGCGTGGTGCTTTTTCTTATTTCCTCTATAAAAATTGAC
ATGAAAAAACTGCGGGCACCTACTCTCTCTCTCTCTCTCTCTCTCTCTCT
GCTGGGGGGTGGTAAGCTTCGATGCGCTCAGTGTATGCACGGCCCGCGGC
AGGTAAAAGCGCGCGTGCTTGGCGATGCTCTGTCGCTTTGTTCTTGTTTC
GAGATGTCGGTTGATTGAACGCGCTCGGCCCGAAACCTCGCTCGCGGGCG
ATGGTGGGACGGGATAGTAGCCCTGATTGCCTCATGTCCTCTCTTTTACA
AAATGATATGCTGATAACACTTGTACGAGTAGAGTTTTGGGAGTAGGTTT
TGTTCACCGTTTTTTGCCACGAAACGACGCCGCTTCGCTGCAAGCCTTGC
TGCGGGTTGGGTTGGGTGCGCAACATACGGGGGCACGAGTTCCAAACGGT
CCGGTAATTCGAAAGGCGTTAGTGGGGGTACAACATACTTCCGCCGTTTG
TTTCCCCCGCCATCGTCTCAACACGGGGGCAAAAGCTGTCCATCCCCGTG
CCACAAATTACCCAACCCAACCCACCCACCCATCCGTTCGCTCAACCGTC
ACACCCAACAAACAAACAAGCAAACACCCCCACGCTTTGTCGTATTGTAT
CCCAAGGACATCTTCCTCGCGAGCCTGGAAGAGCTGGCGTACGCCCTGGC
GGGGCTCGACCAGGGGACGGTTAGCGACGATCCCCTCGGCGCGATAAGGC
AGCTCCTGCGAGAGGGGAGCGACGGGAGCGGCGGCACTGGGGGTGAGCGG
GAGGAGGGAAGGGGCCGCGCACAGCACCCTGCACCCTTAGTAGACGTTGC
ACAAAGATACTTGTTGTGCATTGATAAAGAGGGTGGACACATTCATATGT
AAATACATACATATATACGAAGTATATTAATATACAAAAAAGGTCGAGAG
AGAGGCAGACCAAACAAACAAACAGACGTGGCACTATTGTTGAACGTTGA
TCAAATATAGGGTAGACACATGTGTAGAATATTGGGGGGGGGATACAGTA
GAAACACTCATACTGCGGTATATATTTATTATTATACGGAGAGGTTGAGA
CGGGGAGGCAGAGCAACCCAACAGTCAGACGGGTACGTGAAACGTCACAG
ACAGACAGATAGACTGAAGGAAGGATGGGAGAAGATGTCGAGAAAGGGGA
TGGGTCAGGACAGACTTGGTGGGGCGTTCTCTTCTTGTGTAAAAGAGCGT
GTCTGAAAGAAAAGCGTGCAACTTCAATTTTCCTCTGTTCAGCGTGTGTT
GCATCCAATGCGGCGCGATGGCTTTTGCCTCACCCAATACATGGCAAAAA
AAAAGGAGTGCAGCTGCAGCATCTCGGCCTCGTGGATGCCGGTGGCCTTT
GACCAACCTCTTGCTCAGCTCTCTCAAAGTCCCGTTGTTTGTCACCCGCA
ATGCTCCACTCATCATCGCTCTCTCCGCGCCGCTGCCGCCGCTGCTGTGT
CCGCCACGCTTCGGCTGAACCTCCATCGGGTGCAAAATATTGAAACACAG
AGCTGGTGGAATTCGTGCAGACACTTCCGGGGGACTCGCAGAAGACAGAT
GCGCTCTTTGAAGTGAGCGTAATTGTGTGTACATGTTTTGGTTCCTGTCG
TGACCAGACGAACGTGCCGGGTCGTTGACGTGACTGGAGAAGAGGGTAGT
TTTTATCATGCAAACAGATTATTCATTCTCAACGGTCGGAGGTTTTGTGG
AGTGTGCCGTGCGTCTGTGCTTCGCCCATCGTTTCTTTTGCCGAACGTTG
TACTTTCTACACCTGGGTAGTTCGAAGGGGGTTGGCGATTGCGCTTGACG
CGGTGATTGACCAATTTTTTCGCATGTCGTGCCTCAGTAGCGCTGCGCTG
CTGCAGCGTGAACGTTTTCCGTGAATCATTTCGCTTCATTTTTCGCTCGT
TGTTGCCGTCTTCCCTTCCCCATTATCTTCCCATTTTTTTGCAGTGTTCT
ACTCAAAGCATTGCGCCTCTTTTTTGCCGCTGCCACTGCTGTTGCTGCCG
CTGCTCCTGCATGTACCTCTCGTATTGCGGCCACCGTGTCATACGTTCTG
ATACCACCTTGGCCCGTGGCAACCATCTACGGACCACGTGCGACCATCCA
CCACGACTTTCTTTCTTGCCTGCCATTCCAGGTGGGATCAGAGGTGGTGC
AGAACCTTGCCGAGCGAGCGAGCAAGCGGTTCGACGGGCTCATATCCGGG
GGCGGCCGGGGCGGCGGCGCGAAATGAAAATGGCATATGGCATTGGGTTA
GTTACCGCACAGTGCCGGTGTGGGTTGGTGTAAAAAACTCTGAAAACATG
TGTGTATCCGGTCCTGGGAAGGAGAGAACAAGCGGACAAAGGAGACTCTG
AAGCAGGACGAGGTTGAGGTGGCGAGACAAGGACGGCGGCAGAGAGACAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGACAGAGAGAGAGAGACAGAGAGAGACAGAGAGAGACAGAG
AGAGACAGAGAGAGAAATAAAGAGAGGTGGTCGAGTGAATATATCATACG
TGGTTCCTTCTCCGGAGGACAAAGCTCGCGGCAGAAAAGTGCCAGCGTGG
ATGGTCTTCGACCTCGACCCACAAAACTACAGCAGCAGTAGTCATCCATG
CCGATTGTTACGAGGAAGTGAACAAAGCGTACGACCGTCTCATCGCTGAG
TACACCTGCGTGCATGGGTACATACGCTGTAAATATTCGCCCGCCCAATC
CCAAGCCGTCCGACTGACGTGTTGTTGCAACGCGCCAGAGCCTCGCACTA
CTGTTTGTTGTAGGGCGACAGCAGGAGAGGGGACGGCAATCTATATAGCG
GCGTGTAATGCTCGGGTGCGAAAGGGGCGGAGATGATTTTTGTGGGAGCC
GGATCAGAGCAGGGGCGGGGGCGTCCACAGAGAAAAAAAACGGGTGAAGA
GCGCGTGGGAGAAATGTGTTCAACGGCTGATAGACATCATGAGTCAGCCG
GGAGCGCGAGAAACGCAGAGGAGTTGGGGCGGTTGTTCTGTCCATCAAGA
TGACGATGAATGTGATTTTTTTCAGATCTACACCCGTAGTGGATGCACAC
CTCTCCTCAGCAGGTACTGGCATCCTGCATAAGGAAC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig16:10259..27145-

>mRNA_P-littoralis_Contig16.5.8 ID=mRNA_P-littoralis_Contig16.5.8|Name=mRNA_P-littoralis_Contig16.5.8|organism=Pylaiella littoralis U1_48|type=CDS|length=2898bp|location=Sequence derived from alignment at P-littoralis_Contig16:10259..27145- (Pylaiella littoralis U1_48)
ATGCGAGCCACCCCAGTCCTGTCCGCCGTCGCACTGGCGTCTTGCCGCGG
CAGCGGTGCGATGCCGGCGACCGCAGCCGCAGCAGCGACCGCATCCGCAA
CAGCGGCAACGGCGAGAAAGCATCACCACCAACCGCCACCGTTTTCAGTG
GCGGCGGGTGACCCAGCTCGAGCGCACCCGTCACGTAATAGAAGAGCACG
AAGGACAAGAACTGGGAGCCGAATACGCAGCAGCAGGAGCACTGGCTGGA
AGAGCAGTAGCCGAACCGGTCCTCTCTTGTTTCAGAGCTTGTCGTCATCG
TCGTCGTGGCCGGCGCCATCGATCCCATCCCCGCCCTCATCCTTTCACTC
GTCCTCGTTCAAGGAGGCGGCACGAACACCGAGAAGAAGCGTCGCCCATT
CCACTAGCCGTGCCGCAATTGTAAATAGCAACGGCGTCCCGCGACGGGGG
CCAAGAGCTTCGTCGCATCACCCGGAGGAGCATCAAGATGCGGCGGCGGC
ACCAGCATCAACACGTCAGGAGCAGCTGCCGTCGATGTCTTGGCTTTCAG
CAACAGGTGCGCTCGGGAGCAGGAGCATAGTTGGCGGCGGCGGCGGCGGC
GCCGCCGCCTCTACCGGAAAGTTTGGGATGTCGACCCGGAGAGAAAGACG
TCCGTTGACGATGATGATGATGGCCTCCTCCCCGGTAACGGACAAAGAGA
TCATGAGGGAGTTCGTCTCGGTGGCCGCTTCGGAGGCGGCCTCCGCGGTT
AAGAACAAGCCGCCGTCAGCGATGCTAGGCGGGGGCAAAACTACCAACAG
GGCCGCCGCCGGCGCCCCTGCTGCTGCTTCCACCCGAGAGGTGACGGGGA
AGGGTGCTGGAGGGGCGGCCGCGGCAGCGGGAGGGGTCGACGACGGTCGT
CCGACGGGATATAGGTACGGAGATGTGCTGACGGATGCTGACGGCCTGCC
GCTGGTGTACGACAGCGACTCTATCGGCCGCTATTGGGACAAGCGGCCCG
GCGAGCTGAACGGGAGGTGGACCAAGTTTCTGTCGGTGACGGTGCCCTTC
GTGACAAGGGTCATCAGGGACTACACCTCCGGGAACATCATGAAGAATGA
GGCTATGCTAGCGCGCGACCTGCGCATCGTCATCGAGAAGCTGGGGCCGA
CGTTCATCAAGCTGGGGCAGGCGCTTTCTATTCGCCCGGACGTTATCGGA
CCCGCGGCCACTGACGAGCTAGCCAAGTTGCAGGACGCCGTTCCCCCGTT
CCCGACCACGCTGGCCATGGAGCTGTTGGAGGAGGAGCTCGGCCGATCGG
ACGGGCGTGCCGTTGCCGTTAAGGTTCAGCGGCCGGGCCTAGCGCAGGAG
GTGACCAAGGACCTGTACGTCCTCAAGAGGGCGGTGGGGGTGTACCAGAA
CCTGTCCGAGAGGTGGACGGCCCAGATGACGGATTACAACGAGCTGCTTC
GCGTGTGGGCGACGGGTTTCTATCAGGAACTTGATTTCTTGAACGAGGCG
AACAATCAGATCCGCATGAAGAAGGTACTGTCGAGCATGAAGGGGCAGGT
GTTCGTGCCGGACGTCGTCCTCGAGCTGTCGACGAGAAGAGTGCTCGTCA
GCGAGTGGGTCGATGGTGTCAAGCTGACCAAGGCGGACCCTAGCGAGATC
CGCGAGCTTACCAGCATCGCCCAGGAAGCGTTTCTGGTGCAGCTGCTCGG
GGAGGGGTTCATGCACTGCGACCCGCACCCGGGGAACATGCTGCTGGTGG
ATGAGAGCATGCGCGGCGAGCGAGGAAGATTGGCCCTGCTGGACTACGGA
CTCATGGCGGAGCTCGGCGCTAGGGAGAGGGAAGGGATGGTGAGCGCGTT
GATCCACACCGCCAACCGGGACTACAAGTCGCTCATCGAGGACCTGGTGG
CCCTGGAGGTGCTCCCCGGGGACACGGACCGCGGGCAGGTGGAGCCCATC
ATGAAGAGAGTGATCGGGCCCTACGTTTTCGAGGGCGGCGGGGCCAAGAG
CCTCAACTACCAGAGCCTCGCCAAGGACCTGGGCCGGGCCACGCTCGAGA
TCCCCTTCAACATTCCTCCCTACTTCGCGCTCATCGCGAGGGCCTTGGGA
ATCCTCGAAGGCGTGGCGCTCACCGGCGACCCGGACTACCGCATCGTGAT
GGAGGCGTACCCTTTCGTAACCCGCAAGATCATTTCGGATGACTCTCCCG
CCCTGCAGAGGGCTCTAAGAGACATCTTGTACAGCGACGACGGCAAGTTC
GTGGCAAAGCGACTGTCGGTGCTGCTGAGCTACGCCACCGGGGTGGTCGC
GGCGGACTCCGCCGTGTTCGTGGACTTCGACACGCTTCCCTCCACGGCGG
CATCCCTGAGCCAAACGCTCAAGTTCCTGCTCGCGGATGAGGCGCGGCCG
CTCAGAACGGCTCTCGTTGGCGAGGTTTCGAACGCGGCGGACCTGGTGCT
GAGGAGGAGCACGAGGCAGGCGGTGGTGAGAGCGAAGGATCTCCTCCGGC
CGCCCCCGCCCCCTCTCCCCTTCCTGCCGCGGCTGCCGTCCCTCCCATTT
CCCGTGCCGGAGTCAGTGGTGGACGCGCTCAGCCCAAAGCTCACGGTCGA
AGAGGACATCTTCCTCGCGAGCCTGGAAGAGCTGGCGTACGCCCTGGCGG
GGCTCGACCAGGGGACGGTTAGCGACGATCCCCTCGGCGCGATAAGGCAG
CTCCTGCGAGAGGGGAGCGACGGGAGCGGCGGCACTGGGGAGCTGGTGGA
ATTCGTGCAGACACTTCCGGGGGACTCGCAGAAGACAGATGCGCTCTTTG
AAGTGGGATCAGAGGTGGTGCAGAACCTTGCCGAGCGAGCGAGCAAGCGG
TTCGACGGGCTCATATCCGGGGGCGGCCGGGGCGGCGGCGCGAAATGA
back to top