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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1564 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 996 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789763.4163775-UTR-P-littoralis_Contig16:786235..786802 | 1680789763.4163775-UTR-P-littoralis_Contig16:786235..786802 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig16 786236..786802 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789763.4317782-CDS-P-littoralis_Contig16:786802..786865 | 1680789763.4317782-CDS-P-littoralis_Contig16:786802..786865 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 786803..786865 - |
| 1680789763.441267-CDS-P-littoralis_Contig16:787041..787974 | 1680789763.441267-CDS-P-littoralis_Contig16:787041..787974 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig16 787042..787974 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig16.201.1 >prot_P-littoralis_Contig16.201.1 ID=prot_P-littoralis_Contig16.201.1|Name=mRNA_P-littoralis_Contig16.201.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=332bp
EEEEGEEDDEATEKGGGAEPAVEGRSGVDDDDVDNDDDDDDDDDDGDDDD
DDEDEDDDDDLKRYVAAAAAVAAAAAAAVTGGGSNLKSTSPAAAAAVAGS
VGLSPSPSSRAPPFPRVEWIQPSFAGKNQNQNQQQRAGGGGGCARRVPRV
SRAGSLGQFLNRSKKAVFSPGGAAGSGSGHSSPAFSLSPRPPTGTVSADG
SWAGSGHGEKGREEEAAATPSGVAAGGSWGTLVGRIGGGGSAIGSRNVSR
SGGGVVGGGGGGSGMEPQQQQQQQRRSRRRCYSDSERTAAAAADGRGSSR
RADGEKRLLLSVQKRQRQRQCRPRSRSRRKL* back to topmRNA from alignment at P-littoralis_Contig16:786236..787974- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig16.201.1 ID=mRNA_P-littoralis_Contig16.201.1|Name=mRNA_P-littoralis_Contig16.201.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1739bp|location=Sequence derived from alignment at P-littoralis_Contig16:786236..787974- (Pylaiella littoralis U1_48)
GAAGAGGAGGAAGGGGAGGAAGACGACGAGGCGACGGAAAAAGGAGGCGG
TGCAGAGCCTGCGGTGGAGGGTCGCAGCGGTGTGGATGATGATGATGTCG
ACAACGATGATGATGATGATGATGATGATGATGATGGCGACGATGATGAT
GACGATGAAGATGAAGACGATGATGATGATTTGAAACGGTACGTTGCCGC
CGCCGCCGCCGTAGCAGCAGCAGCGGCGGCGGCCGTGACCGGCGGTGGGT
CGAATTTGAAGAGCACTTCGCCGGCGGCGGCGGCGGCGGTGGCTGGATCG
GTCGGACTGTCGCCGTCTCCTTCGTCCAGAGCTCCGCCGTTCCCTCGCGT
TGAGTGGATCCAACCATCCTTCGCCGGGAAGAACCAGAACCAGAACCAGC
AGCAGCGCGCCGGCGGCGGCGGCGGCTGTGCGCGACGAGTGCCGCGTGTC
TCGCGAGCCGGCTCGTTAGGTCAATTCCTGAACCGCAGCAAGAAGGCCGT
CTTCTCGCCCGGGGGGGCGGCCGGTTCGGGGTCCGGGCATTCTTCCCCGG
CGTTCTCGCTGTCCCCGCGACCGCCAACCGGCACTGTTTCCGCCGACGGT
AGCTGGGCGGGCTCGGGGCACGGAGAAAAAGGACGGGAAGAAGAAGCGGC
GGCGACGCCTTCGGGTGTCGCGGCGGGGGGGAGCTGGGGCACCCTAGTGG
GCCGGATAGGCGGAGGTGGGAGCGCCATCGGCAGCAGAAACGTCAGCAGG
AGCGGCGGCGGTGTTGTTGGAGGAGGAGGAGGAGGAAGCGGAATGGAGCC
GCAGCAGCAACAGCAGCAGCAGCGTCGTTCGAGGAGGCGGTGCTACTCCG
ACAGCGAGAGGACCGCCGCCGCTGCTGCTGACGGCCGTGGCAGCAGTCGT
CGCGCGGACGGCGAGAAGAGGCTGCTGCTGAGCGTTGGGAGCCGTGCCGG
GGGCGGGAGAAGGAGCGGCGTTGGTGTCGGTGTTGGTTTTGATGCCTCGT
CACCGAGAGACGCACGGCACGCGATGATCGAGTACCCGGCGGCGGCGGAG
ACGCCGCCGACTGTACCCGGTTCCCGAAGTAGCAGCAGCAGCAGCAGCAG
CAACGGTAGGTTCAGAAGCGGCAGCGGCAGCGGCAGTGTCGGCCTCGGTC
TCGGTCTCGGCGGAAGCTTTAGCAACAGCAGGAGCGGGAGCGGCTTTATC
AGCCCCACCGATGCCGCTGGCCTCGGCAACGGCGGCAACGGCGGCGGCAA
CGGCCGACAGCGCTTCGACAAGGTGTTTCCTACCACGGGCACCGTCGGGT
GGCCGACGCCGACCTTTCCCCTGGGTCGGAGGGGGTCGCAGTCCCCCCCC
CTTGACGATGCCACGCTGTCTCCCCCTCCCCCGGGACTGGCTTTCGCGGA
CGCTAAGCCCGGCGGCGGCGGTGGCGGCGGCGGCGGGGAAAGAGGAAGAA
GCGGCAGCGGCAGCGGCGGTGGCAGCGGCGGTGGCGGAGCGTGGATTGGG
CCGATGATGTTTCGGCACCTGAGGCGCGGCAGCCGCACTTTGGCCGACAG
TTTCAGCAACGACGGTCGGGCTCTCACGGAGATTGTAGAGTCGAATTCGG
TGGCGGTTAACGGTAGCGCTGGCTTCGCCGCCGCCGCCGTCTCTGGTGCT
GGTGCTGGTGCCGGTGCTGGTCCACACTCTGATTATTTCGCCGCTGCTGT
CGTGGCTTCTGGTGATGATACTGCTGCTGCCACTTATGC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig16:786236..787974- >mRNA_P-littoralis_Contig16.201.1 ID=mRNA_P-littoralis_Contig16.201.1|Name=mRNA_P-littoralis_Contig16.201.1|organism=Pylaiella littoralis U1_48|type=CDS|length=996bp|location=Sequence derived from alignment at P-littoralis_Contig16:786236..787974- (Pylaiella littoralis U1_48)
GAAGAGGAGGAAGGGGAGGAAGACGACGAGGCGACGGAAAAAGGAGGCGG
TGCAGAGCCTGCGGTGGAGGGTCGCAGCGGTGTGGATGATGATGATGTCG
ACAACGATGATGATGATGATGATGATGATGATGATGGCGACGATGATGAT
GACGATGAAGATGAAGACGATGATGATGATTTGAAACGGTACGTTGCCGC
CGCCGCCGCCGTAGCAGCAGCAGCGGCGGCGGCCGTGACCGGCGGTGGGT
CGAATTTGAAGAGCACTTCGCCGGCGGCGGCGGCGGCGGTGGCTGGATCG
GTCGGACTGTCGCCGTCTCCTTCGTCCAGAGCTCCGCCGTTCCCTCGCGT
TGAGTGGATCCAACCATCCTTCGCCGGGAAGAACCAGAACCAGAACCAGC
AGCAGCGCGCCGGCGGCGGCGGCGGCTGTGCGCGACGAGTGCCGCGTGTC
TCGCGAGCCGGCTCGTTAGGTCAATTCCTGAACCGCAGCAAGAAGGCCGT
CTTCTCGCCCGGGGGGGCGGCCGGTTCGGGGTCCGGGCATTCTTCCCCGG
CGTTCTCGCTGTCCCCGCGACCGCCAACCGGCACTGTTTCCGCCGACGGT
AGCTGGGCGGGCTCGGGGCACGGAGAAAAAGGACGGGAAGAAGAAGCGGC
GGCGACGCCTTCGGGTGTCGCGGCGGGGGGGAGCTGGGGCACCCTAGTGG
GCCGGATAGGCGGAGGTGGGAGCGCCATCGGCAGCAGAAACGTCAGCAGG
AGCGGCGGCGGTGTTGTTGGAGGAGGAGGAGGAGGAAGCGGAATGGAGCC
GCAGCAGCAACAGCAGCAGCAGCGTCGTTCGAGGAGGCGGTGCTACTCCG
ACAGCGAGAGGACCGCCGCCGCTGCTGCTGACGGCCGTGGCAGCAGTCGT
CGCGCGGACGGCGAGAAGAGGCTGCTGCTGAGCGTTCAGAAGCGGCAGCG
GCAGCGGCAGTGTCGGCCTCGGTCTCGGTCTCGGCGGAAGCTTTAG back to top
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