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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 1779 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-20_000350.1 |
| Cds size | 1779 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789360.4033778-CDS-P-littoralis_Contig102:530933..531509 | 1680789360.4033778-CDS-P-littoralis_Contig102:530933..531509 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig102 530934..531509 - |
| 1680789360.412677-CDS-P-littoralis_Contig102:531572..531871 | 1680789360.412677-CDS-P-littoralis_Contig102:531572..531871 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig102 531573..531871 - |
| 1680789360.4249687-CDS-P-littoralis_Contig102:532439..532658 | 1680789360.4249687-CDS-P-littoralis_Contig102:532439..532658 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig102 532440..532658 - |
| 1680789360.4331083-CDS-P-littoralis_Contig102:534679..534833 | 1680789360.4331083-CDS-P-littoralis_Contig102:534679..534833 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig102 534680..534833 - |
| 1680789360.4432874-CDS-P-littoralis_Contig102:536012..536348 | 1680789360.4432874-CDS-P-littoralis_Contig102:536012..536348 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig102 536013..536348 - |
| 1680789360.4521534-CDS-P-littoralis_Contig102:536741..536936 | 1680789360.4521534-CDS-P-littoralis_Contig102:536741..536936 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig102 536742..536936 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig102.110.1 >prot_P-littoralis_Contig102.110.1 ID=prot_P-littoralis_Contig102.110.1|Name=mRNA_P-littoralis_Contig102.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=593bp
EERFHEAEALSLALTRVRSLGSALDSARRAQERASRRENFNEAKRFRDEA
REAEVWLRQTVRDASDVLGRRVGHFHPAAAGGNKYEQQRTHPLITNGGGG
SREPGSAASAVTDAETTAPSHDAGRKHHHYHRHQVAKPDDDDDDDDDDET
PRGNDDLPAKETPNDDETASEGSATTTHEASSPPWLTPSCPRCTESWKGV
LLKLPWPAGVQPDYRTVFKHEWAQAAQKGCCGGCPSNSSVSDPFSVMVIA
NNHKRSSLTMWATGTKYSSGGGGSGSSPGVPITTGGLPPTPLLRTILRLV
AASQDLRPPGPVPPDVAPFRRADSGYGRPPVCTFSVFSAADGGYSRDGAE
RESPRESNKSNNHNNHNSHNSHNSHNSHNHLPDDNKIGQKVDNSGQTEKG
AAAAGAISPHDTTDGNQNKIARAFGHPEVDRTPSATHVINWIEDNPSVAW
GFRCASPALCGVDGHLLQGQERGWQGESEGHRHVGAGKPNCAADDEDAAT
AIGKGRDAGGEDGRGARADSRKRCEEIRGEGSSGGCLDRAVTVTVAAFTA
KESLLKQAAAPLNETSPAVLPDIVGAGGFSEYIPLLDAIIGR* back to topmRNA from alignment at P-littoralis_Contig102:530934..536936- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig102.110.1 ID=mRNA_P-littoralis_Contig102.110.1|Name=mRNA_P-littoralis_Contig102.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6003bp|location=Sequence derived from alignment at P-littoralis_Contig102:530934..536936- (Pylaiella littoralis U1_48)
GAGGAGAGGTTCCACGAGGCCGAAGCCTTGTCCCTGGCGCTCACCCGAGT
CCGCTCGCTCGGGTCTGCCCTCGATTCGGCACGGCGGGCCCAAGAGCGAG
CATCCCGCAGGGAAAACTTCAACGAGGCCAAGAGGTTCAGAGACGAAGCG
AGGGAGGCGGAGGTCTGGCTCCGACAAACCGTCCGCGATGCTTCGGTGAG
CAACAGCAAGGGTCTAACAGCACTCATAAGTTAAAGCAAATACCACATGG
TATGTATCGAACATTTTACATCACAAAATGTCATACCACATTATATCACG
CCACATCATACCACATCACATCACACCAGAATAAATCACAATGCGTCACA
TCACATCACATCGCATCACATCGCACCACATCACATCACATCACCTGCTA
CCTGCATGTCGACTAAGACTTGAACCGATCCTCTGTACAGCAGCAGCATC
CGAAGAGTAACATGAAACATAATCGCCTGCTGCCTTTCGCGCAAGGCGTC
GAATACACACACGTACGCGGCAACCTCTATCCCCGTTTGTTTCATCAAAT
ATTTGCAGACACCAAAGAACCGTTTACGATTTCCTCAGGACGTTCTTGGC
CGGAGAGTTGGACATTTCCATCCAGCAGCAGCTGGGGGAAATAAATACGA
GCAGCAGAGGACACATCCGCTCATCACCAACGGCGGCGGAGGGTCACGAG
AACCAGGATCCGCGGCGTCTGCAGTCACAGACGCGGAAACCACCGCCCCT
TCTCACGACGCCGGACGCAAGCACCACCACTACCACCGCCACCAGGTAGC
CAAGCCCGACGACGACGACGACGACGACGACGACGACGAAACTCCTCGAG
GAAACGACGACCTCCCCGCCAAAGAGACACCAAACGATGATGAGACTGCT
TCCGAAGGCTCGGCGACGACGACGGTTGCCCCGCGGTCCGCCTCCAGCAG
CAGTGACGAAGAACCGCGGGGGACATCGACGGTACGCTATGTGCTACTCG
CATACCCCACATTAATATGCTTTCTCGTGCTCAAGTTCTGTTGTGAGTTA
ATGCACTCTGATGTCACGGCAGGTTTCAATTTTACGTTTCTAGCTGCAGC
AGCGCACCAAACACCATGCTACGCTCTGTGCTCTGTATGCATCTGCATTT
GGAGCATAATCTCTGTGTGTGTTCGTGTGTGTTAGGTGTGTGTGTGTATG
CGTGTGTGAGTAAGTGTTCGTGTGCGTCCTATCTATCAGGTTTGGGGAGC
GCACCTGCCCGAAGAAGAGGCACACCAAAGGGTAGGTTATCAACACTCCA
CATATACACACACAATGGATGGACGCCACCCCCCCTTTTCCGACGTGTTG
GACGCCTGAATGCCTTGTTGAGACCCTATTAAAGTCCATAATTCCCCCCC
GAGGTCTGGCCTTGAAACGGTATTGAGGACATTTATGATATTTTCAGGGT
GTCCACAATCGGTGAGGGCATCCGGCACCTCGACGAAGGGGAGGTGGCGC
CCACCTTTGTACTGCTTGCAGGAACGCATGAACATGCGTCTCCCGGCACG
TGTACCCAGACCATTCGTGTGCGTGTCTTGATGGCCATGTGTATTTTCCT
CCTGCAAATGAAAAAGTATCGGTATCAGATACCGGAATCATTTATTTTTC
ATTTCATGAACATGATTGTACTCTTCGAGGCATGTTTTCTTTTGTCTGAC
ACATGATGAGTAGCCTAGCATGTCGACAAACCAATCTTCTGGCGTCGTCT
CGATGATGACAAACACTGCTGCTGCTTGTGAGTACGTATATGATGATGAT
GATGATGACAACAATCCTCCCAATCCACGAAAAAACCACAATGTTTATTT
TCTTGACCACCAGGTACCTATGAATAACGTTTACCAACTAGCGAATAAGG
GAAACCCATCGACGTGACTCCGCGGGACGATGTGTGGAGTTCCTCACAAG
AGAGGTTTTCTGACTATCAATGAGGCCGGAAATAAGCACATCCGTACCAT
CGAAATGCATTTACTCCTCTTACGCGACTCTACATTTTTGTACGTTCTCC
CCCCCCCCCCGGCAAATGTGAACGTTTGAACGGGGTTTCCGCCGAATCGC
CAGCACGAGGCATCGTCGCCGCCCTGGCTGACACCGTCCTGCCCGAGATG
CACCGAGTCCTGGAAAGGCGTTCTTCTAAAGTTGCCGTGGCCGGCGGGGG
TTCAGCCCGATTACCGAACCGTATTCAAGCACGAGTGGGCTCAGGCTGCT
CAAAAGGGTGAGAGCGAGGGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCGAAAATACGA
CGACTCCCCTTTGCGTAAGCTTCTTGTCGTACACCGAGGGTGTTTTGACG
CTAGAAATGAGCTGCGTACTGCTCAATAGGATGGCAGAGAAAGACTGGGC
TTTTCCTGCTCAAAAGGGTGTGTGACTGAGATATATATATACATAGAGAG
AGAGAGAGAGAGAGAACCACAAGCACGACGATCCTCCTTATGATGTTTTG
CTTGTTCAGGAAAACGGAACGTGTTTTGACGTTGGAAATGAGCTCGCACT
GTTAAAGAGGGTGGCAAAGAACGTTGTAGCTGGGTTCCCTGTAGCTGTTT
GATCAGCTGTTGTTCAGCTGCTAATTCCTAGCTGTTGCTTGTTGTGGTGA
TTAAGTACCGTTTAGAAACTACCGCGGTCACTAGCTCGTCGCCAAAATCA
AGCCCGTGGTCGCACCCCAGGTACAAAGAAACGTGCGAGGAGAAACCGAA
GGAATTGAACTTTCACCGGCACAAATAGAGGTGTACTCTATGGTGGCTAA
AATCAAGGTTCAATAAAAGAGAAGAACGGAATTTTTATTTTGTACCATGG
GTCAAGCTCTGCATAAAGCCACTTCTCCAACACAACATAATGGCAGTCCA
CGATGTCGGTTTCGTTGTTGACGGTTTCGTTGTCGAGAAAGGCCTGCAAC
ACCAGAGATCAAAGATAAAGGTGCCCCTGAGACGGGGCATATATTGATTT
TCTTGTAGAGAAAGTCGGTTCCGTATTCTTTCCCATAGACTTTCAAAACA
AAGAAATATAGCACTTGAAAAAAATAATCAGAAGTTTCTTGCTCTGCTGC
AGATGACAAGGGAAGAGAACCTCCCCGGATTGACCTACTCTGTTGCCTTA
ACAACACGGGTGGGTCTTTCCAACGTTGCGCCGCTCCAAGAGGCTTTCAG
TTCTTCTGTTTTTGTACCTCATAACGTTTGTACGAATTAGGGTCAGGGCT
TGATGTTTTAAACAGTCAATCACGGTGATGGCGGCGGCGGCGGCGGCGGC
GGTGGCGGCGGTGGCGTACGTTGCGGTGGAACATAAAACTGATTAATTTT
TGCATGGCTTCTTATTCAAGAATACTTCATTGCTTTTTAATCGTGATTGG
TTGCTTTGAGCATGGCGTGTTGTTTGCCAGATTCGTTTGCTACTCTACTG
GTTCCCTTAGAGCTATGCACGGCTTTCTTGTTGGAGATTGATTTGCCGTT
TACTTATGATCAGTTGGAACCAAGTATGGCTTGTTTTGTCAAATTTATTT
ACTGTTTACTGGATCAGTTGGGACAAAGCATGTTTTTTTGTGAGCTTGTT
TGACGTTTAATTGTGTTTGGTTGGGATCAAGCATGACTTATCGTTCACGA
TTTGTTCGAACTAATGGTATTTGTTGGTTGTTTTTGACATATCGCCCGCT
GTTTATTATTGTTTGCTGTTTGGTTGTGATCGGTGCGGACTGAGCATGGC
TTGTTGTGTGAGATTTGTTTGCTTTTCAATCGTGAATAGTTATTTTTAGC
ACGTGGCTTCATGTTTGACGCTTGTTTGCTATCTGACTGTGATAAATTAG
GGACTAAGCATGGCTTGTAGCTGAGATTGTTTGCTGTTTGACATCGGTTT
CCTCTTAAATTGTGATCCGTCGAGGCTTCGACTAAGAACGTGGTGCCGTT
TATTGCCCCGGCTAGAAAAAAACGTCGCCACGTGTTCCCGCGACATACGA
ACCGCGCAAGAGCGTCGAAACGACGGTCGTGCATCGTGTATTCTTCGTTG
TATTAAATCAAGAGCGCCTGACATACCAACAGAGCAACGGCCGCCCATCG
TATATTACCATGAATACATCAACAGCATAGTACAGTAGCTGTTCATTTGA
TACAGCGATCATATAATACAGATAGTGACACAAACTGTCGTTTGTCGTTT
CATGTCTCGCTTCCAATAACGGGTTTAGGCTGCTGCGGCGGTTGTCCCTC
GAATAGTTCGGTGAGTGATCCTTTTAGCGTGATGGTTATCGCAAATAACC
ATAAGCGCTCGTCTTTGACAATGTGGGCTACAGGGACGAAGTACAGCAGC
GGCGGCGGCGGTAGTGGTTCATCGCCAGGGGTTCCAATAACGACCGGCGG
TTTGCCCCCCACTCCGTTACTACGCACCATCCTTCGCCTCGTCGCGGGTG
AGATAAACGCCCTTTTTCGCTGCAAACATTGTTCCACTTCTGTACGTACC
GTGGGCTAACGGTATCGCTTAGTCGTGTGCGTTGTGCCTGTTGATGGTGA
GAACGCCGCGTCATACACAAACTGGATTTTCAACGCTTGCACGCTGACCT
CGAAGTATCCCGTTTTCCTCTTGCGGTATTTTTTCTTTCATCATACATAC
CTTGCGACCAAGTTGGCGTTCTTTCGGCATGATCTTCACCCCCCACGCTC
CCCACAAAGAACTTCGTCGTGAGCCCTCCCACATTTATCAGAGTGCCAAC
GAGCAATGAACGTTGCCCGAGGCTCAAAACCAAAGCAGGATACCCGACTG
ATGCCCAAAAGAAGTGGGTGTCCGGCGACCTCAGTGCTACAAAGTCCGCG
ACCAACAACGTCAGTCCCCGTATTACCCTCGAGGGTTCGACCTCAAAATT
TTATTCGCTTTGCGCTGCTGGTCTTCAATCTTCTCAGCATACTTCATTTT
CTGATTCCGCCCAACACACCTGGCCGCCGCAACTCTGGCCCGTTCGGTGT
ACTTTTTGGCTGCAGCGTCGCAAGACCTCCGTCCGCCGGGACCAGTACCC
CCGGACGTGGCCCCGTTTCGACGAGCAGACAGCGGGTACGGCCGGCCTCC
TGTGTGCACCTTCTCCGTCTTTTCCGCTGCCGATGGCGGTTACAGTAGAG
ACGGGGCGGAGCGGGAATCACCGCGAGAAAGTAACAAAAGCAACAACCAC
AACAACCACAACAGCCACAACAGCCACAACAGCCACAACAGCCACAACCA
CTTGCCCGATGATAACAAGATCGGTCAGAAGGTTGACAACAGCGGCCAAA
CGGAGAAGGGCGCGGTCATGGTTGACGGGAGCACACACAGCGGCGGGCGG
GGGAGCGGCAGCCGATCGAGCGCCGAGGCCGCGGCTGGCGCCATCAGCCC
TCACGATACGACCGACGGAAACCAAAACAAAATCGCGAGAGCTTTCGGTC
ACCCGGAGGTCGACCGCACCCCTTCGGCGACCCACGTAATCAACTGGATC
GAAGACAATCCTAGCGTGGCGTGGGGGTTCCGATGTGCCTCCCCCGCCCT
GTGTGGAGTGGATGGACATCTTTTACAAGGGCAGGAACGGGGGTGGCAAG
GGGAAAGTGAAGGCCATCGACACGTTGGTGCTGGTAAGCCAAACTGCGCT
GCAGATGATGAGGATGCTGCTACCGCCATTGGTAAAGGCCGTGATGCGGG
TGGAGAAGATGGCAGGGGAGCACGGGCGGACTCAAGAAAGCGGTGTGAGG
AAATTCGGGGAGAGGGCTCTAGCGGAGGGTGCTTAGATAGAGCGGTGACG
GTGACGGTGGCGGCGTTCACGGCTAAGGAGAGTTTGCTAAAACAAGCGGC
AGCACCATTGAATGAAACAAGCCCCGCTGTGCTTCCTGATATCGTCGGAG
CCGGGGGGTTCTCTGAATATATTCCCTTGCTAGACGCCATCATCGGAAGG
TGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig102:530934..536936- >mRNA_P-littoralis_Contig102.110.1 ID=mRNA_P-littoralis_Contig102.110.1|Name=mRNA_P-littoralis_Contig102.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1779bp|location=Sequence derived from alignment at P-littoralis_Contig102:530934..536936- (Pylaiella littoralis U1_48)
GAGGAGAGGTTCCACGAGGCCGAAGCCTTGTCCCTGGCGCTCACCCGAGT
CCGCTCGCTCGGGTCTGCCCTCGATTCGGCACGGCGGGCCCAAGAGCGAG
CATCCCGCAGGGAAAACTTCAACGAGGCCAAGAGGTTCAGAGACGAAGCG
AGGGAGGCGGAGGTCTGGCTCCGACAAACCGTCCGCGATGCTTCGGACGT
TCTTGGCCGGAGAGTTGGACATTTCCATCCAGCAGCAGCTGGGGGAAATA
AATACGAGCAGCAGAGGACACATCCGCTCATCACCAACGGCGGCGGAGGG
TCACGAGAACCAGGATCCGCGGCGTCTGCAGTCACAGACGCGGAAACCAC
CGCCCCTTCTCACGACGCCGGACGCAAGCACCACCACTACCACCGCCACC
AGGTAGCCAAGCCCGACGACGACGACGACGACGACGACGACGACGAAACT
CCTCGAGGAAACGACGACCTCCCCGCCAAAGAGACACCAAACGATGATGA
GACTGCTTCCGAAGGCTCGGCGACGACGACGCACGAGGCATCGTCGCCGC
CCTGGCTGACACCGTCCTGCCCGAGATGCACCGAGTCCTGGAAAGGCGTT
CTTCTAAAGTTGCCGTGGCCGGCGGGGGTTCAGCCCGATTACCGAACCGT
ATTCAAGCACGAGTGGGCTCAGGCTGCTCAAAAGGGCTGCTGCGGCGGTT
GTCCCTCGAATAGTTCGGTGAGTGATCCTTTTAGCGTGATGGTTATCGCA
AATAACCATAAGCGCTCGTCTTTGACAATGTGGGCTACAGGGACGAAGTA
CAGCAGCGGCGGCGGCGGTAGTGGTTCATCGCCAGGGGTTCCAATAACGA
CCGGCGGTTTGCCCCCCACTCCGTTACTACGCACCATCCTTCGCCTCGTC
GCGGCGTCGCAAGACCTCCGTCCGCCGGGACCAGTACCCCCGGACGTGGC
CCCGTTTCGACGAGCAGACAGCGGGTACGGCCGGCCTCCTGTGTGCACCT
TCTCCGTCTTTTCCGCTGCCGATGGCGGTTACAGTAGAGACGGGGCGGAG
CGGGAATCACCGCGAGAAAGTAACAAAAGCAACAACCACAACAACCACAA
CAGCCACAACAGCCACAACAGCCACAACAGCCACAACCACTTGCCCGATG
ATAACAAGATCGGTCAGAAGGTTGACAACAGCGGCCAAACGGAGAAGGGC
GCGGCCGCGGCTGGCGCCATCAGCCCTCACGATACGACCGACGGAAACCA
AAACAAAATCGCGAGAGCTTTCGGTCACCCGGAGGTCGACCGCACCCCTT
CGGCGACCCACGTAATCAACTGGATCGAAGACAATCCTAGCGTGGCGTGG
GGGTTCCGATGTGCCTCCCCCGCCCTGTGTGGAGTGGATGGACATCTTTT
ACAAGGGCAGGAACGGGGGTGGCAAGGGGAAAGTGAAGGCCATCGACACG
TTGGTGCTGGTAAGCCAAACTGCGCTGCAGATGATGAGGATGCTGCTACC
GCCATTGGTAAAGGCCGTGATGCGGGTGGAGAAGATGGCAGGGGAGCACG
GGCGGACTCAAGAAAGCGGTGTGAGGAAATTCGGGGAGAGGGCTCTAGCG
GAGGGTGCTTAGATAGAGCGGTGACGGTGACGGTGGCGGCGTTCACGGCT
AAGGAGAGTTTGCTAAAACAAGCGGCAGCACCATTGAATGAAACAAGCCC
CGCTGTGCTTCCTGATATCGTCGGAGCCGGGGGGTTCTCTGAATATATTC
CCTTGCTAGACGCCATCATCGGAAGGTGA back to top
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