mRNA_P-littoralis_Contig159.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 267 bits (683), Expect = 5.690e-81 Identity = 139/178 (78.09%), Postives = 154/178 (86.52%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAPSQNEG-DVDLVEEEVSSETMRYKGVFMKSTDLPPTEVLNYWSK 844
RALVSRFYG VWDDSCLDPSM CDAACLLTPPFSEGNYLSAMKL AEED+ LAA STVVAPTSDE+V+EKL+G+WAEIKKRA+TAVKT Q+ AGE G G++ FKRART GA SRRKN EDDFSMFG NEVAPSQ++G DVD VEEEVS E +RYKGVFMK DLPP++VL YW+K
Sbjct: 321 RALVSRFYGHVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDDNLAAVSTVVAPTSDEDVREKLEGIWAEIKKRAVTAVKTEQNRVAGEGGGQGSDPFKRARTSGAVPSRRKNYEDDFSMFGCNEVAPSQSDGGDVDFVEEEVSGEIIRYKGVFMKPIDLPPSDVLAYWNK 498
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 244 bits (623), Expect = 1.450e-73 Identity = 128/156 (82.05%), Postives = 137/156 (87.82%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAPSQN-EGDVDLVEEEVSSETMR 778
RALVSRFYG VWDDSCLDPSM CDAACLLTPPFSEGNYLSAMKL AEEDEYLAAGSTVVAPTSDE+V+EKL+G+W EI KRA+TAVKTA + AAGE G G + FKRART GA SRRKN+EDDFSMFGRNEVAPSQ+ EGDVD VEEEVS E MR
Sbjct: 312 RALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYLSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWVEINKRAVTAVKTAHNRAAGEGGGQGLDPFKRARTSGAAPSRRKNHEDDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR 467
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5K0P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P1_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.690e-73 Identity = 135/178 (75.84%), Postives = 146/178 (82.02%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAPSQN-EGDVDLVEEEVSSETMRYKGVFMKSTDLPPTEVLNYWSK 844
RALVSRFYG VWDDSCLDPSM CDAACLLTPPFSEGNY SAMKL AEEDEYLAAGSTVVAPTSDE+V+EKL+G+WAEIKKRAITAVKTAQ+ AAGE G G++ FKRART GA SRRKN E+DFSMFGRNEVAPSQ+ EGDVD VEEEVS E MR +VL YW+K
Sbjct: 441 RALVSRFYGRVWDDSCLDPSMFCDAACLLTPPFSEGNYPSAMKLTAEEDEYLAAGSTVVAPTSDEDVREKLEGIWAEIKKRAITAVKTAQNRAAGEGGGQGSDPFKRARTSGAAPSRRKNYENDFSMFGRNEVAPSQSDEGDVDFVEEEVSGEIMR--------------DVLTYWNK 604
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5JWE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE7_9PHAE) HSP 1 Score: 239 bits (611), Expect = 5.250e-73 Identity = 125/175 (71.43%), Postives = 139/175 (79.43%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAPSQNEGDVDLVEEEVSSETMRYKGVFMKSTDLPPTEVLNYW 838
RALV+RFYG VWD S LDPS+LCDA CLLTPPFSEGNY+SAMKL AEE EYL AGS V APT DEEV+EKLDG W EIKKRA+ AVKTAQS AA KRART AG +RRKN ED F++FGR EVAP +EG++DLVEEEVSSE MRYKGVF++STDL P+E LNYW
Sbjct: 191 RALVTRFYGRVWDTSTLDPSVLCDAPCLLTPPFSEGNYVSAMKLTAEECEYLPAGSCVTAPTLDEEVKEKLDGAWTEIKKRAVAAVKTAQSRAAXXXXXXXXXPLKRARTSAAGPTRRKNREDAFAVFGRKEVAPQSSEGNLDLVEEEVSSEIMRYKGVFIESTDLSPSEALNYW 365
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5KBZ2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ2_9PHAE) HSP 1 Score: 223 bits (568), Expect = 7.270e-69 Identity = 122/175 (69.71%), Postives = 137/175 (78.29%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKN-NEDD-FSMFGRNEVAPSQNE--GDVDLVEEEVSSETMRYKGVFMKSTDLPPTEV 826
RALV+RFYG VWD+S LDPS+ D ACLLTPPFSEGNYLSAMKL EE +YL AGS+V+APTSDE+V+EKLDG WAEI+KRA+TAVK AQ AAG+ G FKRART GAG SRRKN N+DD F+ FGRNEVAP NE DVDLVEEEV SE MRYKGVFM+ D+ T
Sbjct: 20 RALVTRFYGRVWDESTLDPSIFADVACLLTPPFSEGNYLSAMKLTVEEGDYLPAGSSVIAPTSDEDVREKLDGAWAEIQKRAVTAVKKAQRQAAGDSDGGGAGPFKRARTNGAGPSRRKNENQDDTFAAFGRNEVAPQTNEEDADVDLVEEEVVSEIMRYKGVFMRPKDVSTTNT 194
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5JGB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB7_9PHAE) HSP 1 Score: 224 bits (572), Expect = 6.130e-67 Identity = 121/161 (75.16%), Postives = 127/161 (78.88%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAPSQNEGDVDLVEEEVSSETMRYKGVFM 796
RALV+RFYG VWD S LDPS+LCDAACLLTPPFSEGNYLSAMKL AE EYL GS V APT DEEVQ+KLDG WAEIKKRA+ AVKTAQS AAG KRART AGSSRRKN ED F+ FGRNEV P EGDVDLVE+EVSSE MRYKGVFM
Sbjct: 226 RALVTRFYGRVWDTSTLDPSVLCDAACLLTPPFSEGNYLSAMKLTAEGCEYLPTGSCVTAPTPDEEVQKKLDGAWAEIKKRAVAAVKTAQSRAAGXXXXXXKRPLKRARTSAAGSSRRKNREDAFASFGRNEVDPQSREGDVDLVEKEVSSEIMRYKGVFM 386
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE) HSP 1 Score: 199 bits (505), Expect = 5.580e-56 Identity = 108/169 (63.91%), Postives = 126/169 (74.56%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNED-DFSMFGRNEVAPSQNEGDVDLVEEEVSSETMRYKGVFMKSTDLPP 817
RALVSR YG VWD + LDPS CDA+CLLTPPFSEG++LSAMKL AEE YL AGS VVAPTS EEV+EKLDGVW +IK+ A+ AVKTAQS A G G LFKRART +GSSRRKN E+ F+ FGR E ++G+ D+VE++V E MRYKGVF+KST P
Sbjct: 281 RALVSRLYGRVWDHNTLDPSFFCDASCLLTPPFSEGHHLSAMKLTAEEHAYLPAGSVVVAPTSYEEVKEKLDGVWTKIKQGAVKAVKTAQSEAEGSGGDGSGGLFKRARTRHSGSSRRKNPEEHQFACFGRTETTQEDSQGESDVVEDDVGGEIMRYKGVFIKSTQRSP 449
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 183 bits (465), Expect = 3.760e-48 Identity = 101/176 (57.39%), Postives = 124/176 (70.45%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAPSQNEGDVDLVEEEVSSETMRYKGVFMKSTDLPPTEVLNYWS 841
RALVSRFYG VWD++ LDP C AACLLTPPFSEG +++AMKL A +DEYL + ST APT DEEV KLD W EIK+RA+ AVK Q+ A+ G+ G +FKRART G RR + D+F+ FGR+ V + D VE+EV++E MRYKGVFM S DL PTEVL+YW+
Sbjct: 565 RALVSRFYGRVWDENTLDPPFFCHAACLLTPPFSEGLHVAAMKLAAGDDEYLPSTSTATAPTMDEEVTAKLDETWKEIKERAVEAVKKEQAAASSGPGAAG--VFKRARTAGXXXRRRPVDGDEFAAFGRS-VGGVEESKQGDAVEQEVANEIMRYKGVFMTSNDLHPTEVLSYWA 737
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5JWR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR2_9PHAE) HSP 1 Score: 175 bits (444), Expect = 7.000e-47 Identity = 103/169 (60.95%), Postives = 118/169 (69.82%), Query Frame = 2
Query: 362 LDPSMLCDAACLLTPPFSEGNY---------LSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHGTNLFKRARTGGAGSSRRKNNEDDFSMFGRNEVAP-SQNEGDVDLVEEEVSSETMRYKGVFMKSTDLPPTEVLNYW 838
LDPS D PP G L L AEE EYL AGS V+ PTSDE+VQEKLD WAEIKKRA+TAVK AQS A G+ G+ FKRART GAG SRRKN++D F++FGRNEVAP S NE D+DLVE+ VSSE MRYKGVFM+STDLPP++VL+YW
Sbjct: 261 LDPSK--DLKVFDVPPLGAGGLPDRNDQKKLLPHKMLTAEEGEYLPAGSDVIVPTSDEDVQEKLDETWAEIKKRAVTAVKKAQSRAVGDGGNGEAGPFKRARTSGAGPSRRKNHDDAFAVFGRNEVAPQSSNEEDLDLVEKGVSSEIMRYKGVFMRSTDLPPSKVLHYW 427
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 135 bits (339), Expect = 6.400e-32 Identity = 86/189 (45.50%), Postives = 115/189 (60.85%), Query Frame = 2
Query: 314 RALVSRFYGSVWDDSCLDPSMLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKLDGVWAEIKKRAITAVKTAQSWAAGEVGSHG-TNLFKRARTGGAGSSRRKNNEDDFSMF---GRNEVAPSQNEGDVDLVEEEVSSETMRYKGVFMKSTDLPPTEVLNYWSKRDTNKCFP 868
RALV+R +G W C+DPS + D++CLLTPP+S G ++SAMKL EE +YL G TV+ PT+DE+V++K W IKKRAI AVK Q+ A G G FKRART G GS+R ED F++ G E + S ++GD+ V+ E R + + M S+DL P +VLNYW K+ FP
Sbjct: 220 RALVARLFGRYWA-GCVDPSFV-DSSCLLTPPYSSGIHISAMKLTEEEGDYLPTGLTVLTPTTDEDVEDKKAEAWGMIKKRAIQAVKEDQAQANGSGDGGGDAGPFKRARTSGNGSARNDAGEDHFAVLCTAGAVEQSGSGDDGDLS-----VAGEIQRSRALQMNSSDLQPRDVLNYW-KQSGRHAFP 400 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig159.78.1 >prot_P-littoralis_Contig159.78.1 ID=prot_P-littoralis_Contig159.78.1|Name=mRNA_P-littoralis_Contig159.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=202bp MLCDAACLLTPPFSEGNYLSAMKLGAEEDEYLAAGSTVVAPTSDEEVQEKback to top mRNA from alignment at P-littoralis_Contig159:348283..349512+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig159.78.1 ID=mRNA_P-littoralis_Contig159.78.1|Name=mRNA_P-littoralis_Contig159.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1230bp|location=Sequence derived from alignment at P-littoralis_Contig159:348283..349512+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig159:348283..349512+ >mRNA_P-littoralis_Contig159.78.1 ID=mRNA_P-littoralis_Contig159.78.1|Name=mRNA_P-littoralis_Contig159.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=606bp|location=Sequence derived from alignment at P-littoralis_Contig159:348283..349512+ (Pylaiella littoralis U1_48)back to top |