prot_P-littoralis_Contig159.48.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig159.48.3
Unique Nameprot_P-littoralis_Contig159.48.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length714
Homology
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: D7FVR7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR7_ECTSI)

HSP 1 Score: 913 bits (2359), Expect = 0.000e+0
Identity = 507/598 (84.78%), Postives = 526/598 (87.96%), Query Frame = 0
Query:  116 SFDRRRDDRYHSVDKGGYGSISDTDKGGRGYYDQAGEGRSGRGEARVLGXXXXXXXXXXXXXXXXXXXXXXXEGQGLGYEGDDYVRGGRSSRQSGGRXXXXXXXRQDFEGVERRHRNDFGGGGDGRGTRREETGRGGVWGYEDDDD-VVEIRPARAPADVAVRVEPASGADGEADDGSLGSRMGPVDREHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQFETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRLLSLD 712
            SFDR +DD Y  VD+GGY   S  + GG G YDQ  + R GRG  R  G  XXXXXXXXXXXX          G+ L +EGD + RGGR+S  +GGRXXXXXXXRQ FEG  R+ R +F         R  ETGRG VWGYEDDDD VV IRP RAPAD  VRVE + G DGE DDGSLGSRMGPVDREHFYS+KSLPDIGASD+AVSALKSLGV+RPSKIQAISYS ILTG+HCVVADQTGSGKTLAYLAPLVQRLRLEELA+VHGRARPGRPRVLILAPTAELAQQV+GVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPP EPRNEETG+ARKRDALLSQLERRMALRTLVFCNTIQGCRQ    VENMLSRASR GQFETLVYHSAIDPKQAA NMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRLLSLD
Sbjct:   22 SFDRSQDDSYGFVDEGGY---SGNNYGGGGGYDQGDQARGGRGAERGYGRAXXXXXXXXXXXXRRGYFTDGRGGEALDFEGDGFNRGGRNSGPAGGRXXXXXXXRQSFEGGGRQQRGEFXXXXXXXXGRAHETGRGEVWGYEDDDDDVVGIRPTRAPADATVRVESSVGPDGEVDDGSLGSRMGPVDREHFYSIKSLPDIGASDLAVSALKSLGVVRPSKIQAISYSAILTGDHCVVADQTGSGKTLAYLAPLVQRLRLEELAEVHGRARPGRPRVLILAPTAELAQQVYGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPGEPRNEETGLARKRDALLSQLERRMALRTLVFCNTIQGCRQ----VENMLSRASRGGQFETLVYHSAIDPKQAASNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRLLSLD 612          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A836CPS5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPS5_9STRA)

HSP 1 Score: 549 bits (1414), Expect = 1.450e-188
Identity = 281/395 (71.14%), Postives = 327/395 (82.78%), Query Frame = 0
Query:  321 VSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLE-ELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRM-ALRTLVFCNTIQGCRQASLAVENMLSRASR-SGQFETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRLLSLD 712
            + AL  LG+ RPSKIQA +Y ++L G HCV+A+QTGSGKTLAYL PL QR  L  +L    GRA+PGRPRVLIL+PT+ELAQQVH VA+R+SG+ P R+CCFTGG G   ++QA+LL EGVDVLVATPGRV TLLE G L+L DCRAV+LDEVDVLF+DETF+LAPIG  AP+  QF+FVTATLP  V++M+K EFPGTKF+ GPGLHRVAPGVEEVL+DCSGPP+E +NE TG ARKR+AL++QL RR  ALRTLVFCNTI+ CR+    VEN L R  R S +F  L YHSAIDP  A  N+++F RSNAL PM++VCTDRSSRGMDFD A V+HV+LYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPL REIMAGNK GKRLL+L+
Sbjct:    1 MEALTVLGMTRPSKIQAAAYRSVLEGHHCVIAEQTGSGKTLAYLLPLFQRWVLSAQLFLAAGRAQPGRPRVLILSPTSELAQQVHSVARRISGAAPLRTCCFTGGGGA--RSQAQLLAEGVDVLVATPGRVGTLLEDGSLSLADCRAVVLDEVDVLFLDETFKLAPIGAQAPDGAQFLFVTATLPTEVAEMVKAEFPGTKFITGPGLHRVAPGVEEVLVDCSGPPEEAKNEATGAARKREALMTQLTRRSGALRTLVFCNTIRSCRE----VENTLRRTDRRSARFSVLAYHSAIDPAAATANLREFSRSNALQPMILVCTDRSSRGMDFDSASVDHVVLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLAREIMAGNKLGKRLLALE 389          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A7S4DKM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKM7_HETAK)

HSP 1 Score: 451 bits (1159), Expect = 1.510e-147
Identity = 236/410 (57.56%), Postives = 301/410 (73.41%), Query Frame = 0
Query:  304 HFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEG-VDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQFETLV-YHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRLLSL 711
            +FYS K   +IGASD  + AL++ G+ RPSKIQA+++  +  G   ++ADQTGSGKTLAYL PLV+RLR EE+A    RARPG PR+L+LAPTAELA QVH VA+ LS + P RS C TG     FK Q +LL+E  VD+L+ATPGRVA LLE  VL LE  RA +LDEVDVLF+DE+F L  +G  AP  TQF+FVTATLP  V+D +  EFP  K ++GPGLH+V+P +E+V+IDCSGP  E + EETG A KR AL   +    A RTLVFCNTI+ CR+    VEN L R  + G    L+ YH+AI+P++   +++ FMRSN+L+PMV++CTDR+SRGMDF++AEV+HV+L+DFPRD  EY+RRVGRTARAGRKG VT L +GRQ+ L REI+  N+ G+RL  L
Sbjct:  110 YFYSQKEFQEIGASDEGIKALEAFGIKRPSKIQAMAHRVLSAGHTAIIADQTGSGKTLAYLLPLVERLRAEEVADPGCRARPGAPRMLVLAPTAELAAQVHLVAKGLSATCPLRSMCVTGSAD--FKQQVRLLKENPVDLLIATPGRVANLLEREVLTLEALRAAVLDEVDVLFLDESFDLGAVGAGAPRATQFVFVTATLPGEVADQVAGEFPDVKQVIGPGLHKVSPNLEQVIIDCSGPEGEKKTEETGFAHKRAALAQLMLTVRAHRTLVFCNTIENCRK----VENALRRLDKRGDKHILLPYHNAIEPQKRGEHLRTFMRSNSLNPMVLICTDRASRGMDFEQAEVDHVVLFDFPRDAAEYVRRVGRTARAGRKGRVTALVFGRQLGLAREIIRLNRSGERLAEL 513          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A0G4ET85_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ET85_VITBC)

HSP 1 Score: 436 bits (1122), Expect = 1.000e-143
Identity = 232/410 (56.59%), Postives = 293/410 (71.46%), Query Frame = 0
Query:  301 DREHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEE-GVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQ-FETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRL 708
            D E F+S K   DIGASD  + A+   G  RPSKIQA+SY T+L+G++CVVADQTGSGKTLAYLAPL+QRLR EE A    RA PG PRV++LAPT ELA QV  V ++L+   P R+ C TGG     + Q +++E  GVD+LVATPGR+ ++L+ G LNL    A++LDEVDVLF+D+TF L PIG      TQF+FVTAT+P SV   +K+EFP  + ++GPGLHR+APGVEEVL+DCSGP DE +NE T   RKR AL  QL++ +  RTL+FCN+I+ CR+    VEN L R  R  + F+ L YHS ID ++       F R N L PMV+V TD++SRG+DFD+ EV HV+L+DFPRDP EY+RRVGRTARAGR G VT L  GRQV L RE+M  N+RG+R+
Sbjct:   36 DDELFFSRKQFADIGASDEMIEAMSIAGAKRPSKIQALSYRTVLSGKNCVVADQTGSGKTLAYLAPLLQRLRDEERAG-KPRALPGSPRVVVLAPTTELASQVSRVLKKLTAVAPVRTACVTGGYNA--RDQMRMVERSGVDILVATPGRLRSMLQMGKLNLHQLSALVLDEVDVLFLDDTFLLQPIGEATAPSTQFVFVTATIPTSVFAQIKQEFPDLRRIMGPGLHRIAPGVEEVLVDCSGPKDEAKNEFTAFERKRKALAGQLDKVVVPRTLIFCNSIENCRR----VENALRRLDRGRKRFQVLPYHSGIDNERRREIFNAFTRENFLIPMVLVSTDQASRGVDFDQVEVGHVILFDFPRDPSEYVRRVGRTARAGRAGRVTSLVLGRQVSLARELMEVNRRGERI 438          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A7S2V2H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2H4_9STRA)

HSP 1 Score: 436 bits (1120), Expect = 6.950e-142
Identity = 235/441 (53.29%), Postives = 316/441 (71.66%), Query Frame = 0
Query:  272 ADVAVRVEPASGADGEADDGSLGSRMGPVDREHF-YSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHG-RARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLE-EGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQFE-TLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRL 708
            A  A RV P  GA     D S+  R+G +D E F YS K+L +IG    A  AL  +GV RPSKIQ+++Y T+L+G+ C++ADQTGSGKTLAYL P++QRLR EE       RA+PG+PRV+ILAPTAELA QVH V + LS  +   S CFTG      + QA+LL+ +G+D++VATPGR+ +LLE G L+L    +++LDEVDVL+++E F L  +G  AP +TQF+FVTATLP+ V + +KEEFP  K +LGPGLHRV+P +++V++DCSGP  E   E++G   KR+AL   L    A RTLVFCNTI+ CR+    VEN + R ++ GQ    L +H+AIDP++  ++++ FMR N+L PM+++CTDR+SRGMDFD A+VEHV+L+DFPRDP EYMRRVGRTARAGR G VT L +GRQ+ + R+I+  N+ G+RL
Sbjct:  114 AQAAQRVAP--GAGNRVLDKSI--RVGALDPEQFFYSKKALEEIGVDKEAEEALAQMGVTRPSKIQSLAYRTVLSGDSCLLADQTGSGKTLAYLLPIMQRLREEEQHFGDAARAQPGKPRVIILAPTAELAVQVHQVVKGLSAQIKLTSMCFTGQQYDP-RQQARLLQKQGLDIVVATPGRLNSLLERGALDLSSTTSIVLDEVDVLYLEENFNLNQVGVNAPMNTQFVFVTATLPELVVEQVKEEFPDIKTILGPGLHRVSPNLDQVIVDCSGPWGEKHTEDSGFRHKREALTELLATVPAQRTLVFCNTIENCRK----VENAVQRWNKKGQKALVLAHHNAIDPERRGKHLRSFMRPNSLLPMILICTDRASRGMDFDTADVEHVILFDFPRDPSEYMRRVGRTARAGRTGRVTSLVFGRQLGMARDIIRANREGERL 545          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: W7TFZ4_9STRA (Dead-box atp-dependent rna helicase 50-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFZ4_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 9.950e-135
Identity = 228/428 (53.27%), Postives = 295/428 (68.93%), Query Frame = 0
Query:  287 EADDGSLGS-RMGPVDREHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLR-LE---ELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQ-FETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRL 708
            EAD+G L   R   +    F+S K+  +IGAS  A +AL S+G+ RPSK+Q I+Y  IL G  C++A+QTGSGKTLAYL PL+QRLR LE   E     GRA P  PRV++LAPTAELA QV  VA+ ++  +P R CC TGG  +  +TQ ++L++GVDVL+ TPGRV  LLE   + L + +A++LDEVDV+F+D++F LA IG  AP  TQF+FVTATLP  V+D +  EFPG K L GPGLH++AP VEEVL+DCSGP +E RNEETG  RKRD L+  L +  A R+LVFCN+I  CR+    VEN L RA R  + ++ L YHSA++P+   +N+  F  S    P++MVCTDR+SRG+DFD A+V+HV+L+DFPRDP EY+RRVG          VT L  GRQV L R IM GN +G R+
Sbjct:   28 EADEGGLDEERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGKGGLGRAPPKSPRVVVLAPTAELAAQVASVARAMTRHMPLRVCCVTGG--KNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGAAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRK----VENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFS-SRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGXXXXXXXXXXVTALVLGRQVGLARSIMEGNSKGARV 448          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A4D9D599_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D599_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 3.470e-131
Identity = 228/428 (53.27%), Postives = 295/428 (68.93%), Query Frame = 0
Query:  287 EADDGSLGS-RMGPVDREHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLR-LEELAKVHG---RARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQ-FETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRL 708
            EAD+G L   R   +    F+S K+  +IGAS  A +AL S+G+ RPSK+Q I+Y  IL G  C++A+QTGSGKTLAYL PL+QRLR LE   +  G   RA P  PRV++LAPTAELA QV  VA+ L+  +P R CC TGG  +  +TQ ++L++GVDVL+ TPGRV  LLE   + L + +A++LDEVDV+F+D++F LA IG  AP  TQF+FVTATLP  V+D +  EFPG K L GPGLH++AP VEEVL+DCSGP +E RNEETG  RKRD L+  L +  A R+LVFCN+I  CR+    VEN L RA R  + ++ L YHSA++P+   +N+  F  S    P++MVCTDR+SRG+DFD A+V+HV+L+DFPRDP EY+RRVG          VT L  GRQV L R IM GN +G R+
Sbjct:  294 EADEGGLDEERAARLADTFFFSRKTFEEIGASPEARAALGSMGIARPSKVQTIAYPHILQGSSCIIAEQTGSGKTLAYLLPLLQRLRGLEGGGEGEGGLGRAPPKSPRVVVLAPTAELAAQVASVARALTRHMPLRVCCVTGG--KNPRTQGEMLKQGVDVLIGTPGRVQYLLEENKVLLGEMQALVLDEVDVMFLDDSFDLAVIGGAAPAHTQFLFVTATLPVPVADQIAREFPGVKKLWGPGLHKIAPQVEEVLVDCSGPWEEERNEETGFVRKRDMLVQNLLKHPAPRSLVFCNSIPTCRK----VENALRRADRQEKRWQVLAYHSAVNPQDRQKNLDIFS-SRVERPLIMVCTDRTSRGVDFDTADVQHVVLFDFPRDPSEYVRRVGXXXXXXXXXXVTALVLGRQVGLARSIMEGNSKGARV 714          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A7R9YGA2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGA2_9STRA)

HSP 1 Score: 365 bits (938), Expect = 9.710e-116
Identity = 211/441 (47.85%), Postives = 277/441 (62.81%), Query Frame = 0
Query:  302 REHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRL----SGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAG-----VLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCS----GPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSG-QFETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDF---------------DRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMAGNKRGKRLLSLDG 713
            REHF+SVKS  ++GAS   +SAL++LGV  PS+IQ++S++ +L G + VVA+QTGSGKTLAYLAPLVQR  LE   K   +   G PR+LILAPTAELA+QVH V + L       V   S   T   G      + L +   D++VATPGR   LL+A       L+L     ++LDEVDVLF+D++F L PIG  A    QF+FVTATLPQ V   L  EFP  + L GPGLHR APGV +VL+DCS    G   +    ET + +K D L+S LE R   RT+VFCN++ GCR+    VEN L+R  R   +++ L YHSA+    A R++  F   N+L P+V+VCTDR+SRGMDF               + A V+HV+L+DFPRD  E++RRVGRT    RKG+VT+LA G+QVPL R+++    +G+RL  L G
Sbjct:    6 REHFFSVKSFAELGASAEIISALRTLGVETPSRIQSLSFAALLEGSNAVVAEQTGSGKTLAYLAPLVQRC-LEAKRKDPSK---GAPRLLILAPTAELAEQVHSVCRGLCEVVKADVTLSSLLVTSSSGSLGSIASVLRKRSTDIVVATPGRAVALLKAQGGRPPALDLSRDPCIVLDEVDVLFLDDSFGLQPIGAAASAQAQFVFVTATLPQEVLKTLTTEFPAIQVLCGPGLHRAAPGVRKVLLDCSLDGRGRASDKGTVETALQKKLDTLVSVLEARPLRRTIVFCNSVDGCRR----VENALNREDRREMKWKALPYHSAVSSDAAQRSLSTFSALNSLVPLVLVCTDRASRGMDFGFSAGRATGRPSDSIETAGVDHVILFDFPRDVAEWVRRVGRTGXXXRKGLVTILAQGKQVPLARDLIVKTSKGERLYDLPG 438          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: UPI000A2B4810 (DEAD-box ATP-dependent RNA helicase 50 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI000A2B4810)

HSP 1 Score: 349 bits (895), Expect = 3.840e-109
Identity = 195/412 (47.33%), Postives = 276/412 (66.99%), Query Frame = 0
Query:  304 HFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGS-VPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLA--PIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQ-FETLVYHSAIDPKQAARNMQQFMRSNALS-PMVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTARAGRKGV--VTVLAWGRQVPLVREIMAGNKRGKRL 708
            +F+SVKS  ++G +D  + +L+ L   RPS +QA++++ ++ G+ C++ADQ+GSGKTLAYLAP++QRLR EEL + H ++ P  PRV+ILAPTAELA QV    + LS S VPF+S   TGG  +  +TQ + L++GVDVL+ATPGR   L++ G L L + R V+LDEVD+LF DE F++A   +   +P  TQ++FVTATLP+ V   L E FP  + ++GP +HR++P +EE+++DCSG   + +  +T    K+ ALL   E R   RT+VFCN I+ CR+    VEN L R  R G   + L +H+A+  +    +M++F RS +      MVCTDR+SRG+DF    VEHV+L+DFPRDP EY+RRVGRTAR G KGV    +   G+QV L R+IM  N++G  L
Sbjct:   80 NFFSVKSFRELGCADYLIQSLQKLSFPRPSNVQAMAFAPVIAGKTCIIADQSGSGKTLAYLAPIIQRLRQEEL-EGHSKSSPQAPRVVILAPTAELASQVLDNCRSLSRSGVPFKSMVVTGGFRQ--RTQLETLQQGVDVLIATPGRFLFLMKEGFLQLTNLRCVVLDEVDILFGDEDFEVALQSLINSSPITTQYLFVTATLPRDVYSKLVEIFPDCEMIMGPSMHRISPRLEEIIVDCSGEDGQEKTTDTAFLNKKSALLQLAEERPVPRTIVFCNKIETCRK----VENALKRIDRKGAVIQVLPFHAAMTQESRLASMKEFARSPSKQVSQFMVCTDRASRGIDF--WGVEHVILFDFPRDPSEYVRRVGRTAR-GAKGVGKAFIFVVGKQVSLARKIMERNRKGHPL 481          
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Match: A0A8J9WRI4_9CHLO (DEAD-box ATP-dependent RNA helicase 50 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WRI4_9CHLO)

HSP 1 Score: 352 bits (903), Expect = 1.250e-108
Identity = 208/420 (49.52%), Postives = 273/420 (65.00%), Query Frame = 0
Query:  296 RMGPVDREHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTG-EHCVVADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELAQQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRVATLLEAGVLNLEDCRAVILDEVDVLFMDETF----QLAPIGTCAPEDTQFIFVTATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNEETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRSGQFETLV---YHSAIDPKQAARNMQQFMRSNALSP-MVMVCTDRSSRGMDFDRAEVEHVLLYDFPRDPIEYMRRVGRTAR-AGRKGVVTVLAWGRQVPLVREIMAGNKRG 705
            R GP     F++  S  D+GA+D  V AL+ +GV RPS IQA +Y  +++G  H V+AD  GSGKTLAYL PLVQ LR EE +          PRV+I+APT EL  QV  VA+ L+   PFR+   TGG    +KTQ + L+EGVDV+VATPGR+   ++AG L L+ CRAV+LDEVDVL  D TF    Q+AP+ + APE T+F+ VTATL + V   L+++FPG     GPGLHR APGV E L+DCSG   +  NEETG  RK  ALL  L+ + A RT+VFCN I+ CR+    VEN+L R       E LV   YH+AI+    ++ ++ F+      P MV+VCTDR+SRG+D   A VEHV+L+DFPRDP EY+RR GR +R AG  GVV++L  GRQV L ++++  N++G
Sbjct:  207 RRGPGSTATFFTQSSFKDVGANDEIVKALRGIGVERPSFIQAAAYQVLMSGARHIVLADHAGSGKTLAYLLPLVQALREEEQSLCDSLTMRNAPRVIIIAPTTELCAQVLMVARGLAKGAPFRAIALTGG--FKWKTQKEALDEGVDVVVATPGRLGEHIKAGNLRLDQCRAVVLDEVDVLLGD-TFAFAQQVAPLRSAAPESTRFVLVTATLAEPVYLQLQQDFPGITPAFGPGLHRTAPGVLEQLVDCSG--GDVINEETGFERKAAALLRVLKEQGASRTIVFCNKIETCRK----VENLLKRKGDDANKEELVVLPYHAAIEDGVRSKALKTFLAPPMGGPKMVLVCTDRASRGID--SAHVEHVVLFDFPRDPSEYVRRAGRVSRGAGASGVVSILVLGRQVSLAKQLLERNQKG 615          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.48.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVR7_ECTSI0.000e+084.78DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A836CPS5_9STRA1.450e-18871.14P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4DKM7_HETAK1.510e-14757.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4ET85_VITBC1.000e-14356.59Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2V2H4_9STRA6.950e-14253.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TFZ4_9STRA9.950e-13553.27Dead-box atp-dependent rna helicase 50-like protei... [more]
A0A4D9D599_9STRA3.470e-13153.27Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9YGA2_9STRA9.710e-11647.85Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI000A2B48103.840e-10947.33DEAD-box ATP-dependent RNA helicase 50 n=1 Tax=Ara... [more]
A0A8J9WRI4_9CHLO1.250e-10849.52DEAD-box ATP-dependent RNA helicase 50 n=1 Tax=Coc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 592..678
e-value: 2.2E-9
score: 47.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 559..678
e-value: 7.9E-16
score: 58.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 557..713
score: 13.66089
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 328..536
e-value: 3.0E-37
score: 139.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 340..521
score: 23.542864
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 334..509
e-value: 1.3E-32
score: 113.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 550..709
e-value: 1.1E-26
score: 95.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 298..519
e-value: 1.1E-51
score: 177.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 302..513
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 346..699
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..252
NoneNo IPR availablePANTHERPTHR47960DEAD-BOX ATP-DEPENDENT RNA HELICASE 50coord: 206..706
NoneNo IPR availablePANTHERPTHR47960:SF1DEAD-BOX ATP-DEPENDENT RNA HELICASE 50coord: 206..706
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 553..686
e-value: 2.79527E-29
score: 111.06
NoneNo IPR availableCDDcd00268DEADccoord: 321..513
e-value: 2.19045E-62
score: 204.983

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig159contigP-littoralis_Contig159:211538..222735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig159.48.3mRNA_P-littoralis_Contig159.48.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig159 210381..222874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig159.48.3 ID=prot_P-littoralis_Contig159.48.3|Name=mRNA_P-littoralis_Contig159.48.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=714bp
MVVDRSRRSSSQSLWPRRCMGAWSSALLGSSLLSVPSGTFVTAFTTFNGF
AGSAPSGGASSLPSALGRLGTRYNVDGSRLAALPLPSSTPTSLDMIVGSG
DGSGGGRGRGGNRSGSFDRRRDDRYHSVDKGGYGSISDTDKGGRGYYDQA
GEGRSGRGEARVLGRGRGRGRAGGVGRGRQGYFTDGREGQGLGYEGDDYV
RGGRSSRQSGGRGRGRGRGRQDFEGVERRHRNDFGGGGDGRGTRREETGR
GGVWGYEDDDDVVEIRPARAPADVAVRVEPASGADGEADDGSLGSRMGPV
DREHFYSVKSLPDIGASDIAVSALKSLGVLRPSKIQAISYSTILTGEHCV
VADQTGSGKTLAYLAPLVQRLRLEELAKVHGRARPGRPRVLILAPTAELA
QQVHGVAQRLSGSVPFRSCCFTGGPGRTFKTQAKLLEEGVDVLVATPGRV
ATLLEAGVLNLEDCRAVILDEVDVLFMDETFQLAPIGTCAPEDTQFIFVT
ATLPQSVSDMLKEEFPGTKFLLGPGLHRVAPGVEEVLIDCSGPPDEPRNE
ETGMARKRDALLSQLERRMALRTLVFCNTIQGCRQASLAVENMLSRASRS
GQFETLVYHSAIDPKQAARNMQQFMRSNALSPMVMVCTDRSSRGMDFDRA
EVEHVLLYDFPRDPIEYMRRVGRTARAGRKGVVTVLAWGRQVPLVREIMA
GNKRGKRLLSLDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase