mRNA_P-littoralis_Contig159.32.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A6H5KGL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL5_9PHAE) HSP 1 Score: 650 bits (1676), Expect = 1.140e-195 Identity = 575/1509 (38.10%), Postives = 679/1509 (45.00%), Query Frame = 2
Query: 740 GDVLPGSLLGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLAVCGIDVGRESFGAIFGDKCVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGE--------EHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREK--DGATDLEARGGKAGKVDMLPTRVVG----VLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVE--CSERDGDVRHKGERL-----------------------ETKERSFNERLVWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWREN-DHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGV---------------KREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSG--ICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDLGFEATLERRRLWGKRAGGMLWGQTEVIPIDQ-GTAVSTDENTAVGETQENGHPAPVVTTLPPGTTGTPPAVASGATP-PADTNKKRSERAAAAV-------NEGPKSNPTEPSSNAPSPRTPSQQAISGDRRHLRRGRQGPSVGGASRRQNDRRRQKPAVVR--EVRLVRGCSRTTXXXXXXXXXXXLADGSVWWVADLHIGSWQQVTVSTGHAAAAGGV---TAEGYLSSSGISAIAVVGLLEQIHTEENSNFGSDSDGKVAAGKKGGRCGHEVAIVAGRGDGRLFLLTQGRTPPTVISEANFS----------------------------------DFKPGSAADGGE---GGRTASPPRPWRVSTVWVGHRSRVISVWIVGDAAHET----PPNAPEG-ESSG----------YTAALDTSRLSSSSRSGGLCRGGLYGA--LVSAGADGTVAWWEWA----------RAE-DVRDVADGGSPSSCEQAGGEVTACAPRLRMLCRAGPGAAITSVTIDGRRQRYCH------SVKTKHR---------------DAEQAKNDAPSLAG-------------AVFCGDTKGNIRCFLEE----------PRAGSRRSEGGVGDGEEGRLS--AEEDLRGRPKKGLAPCLVLKRQHGKDQITRLALRGDCLFSAGHDGQVHQYAISYSAPYFDRP---------------------AESHRHGSPVGTDSQTPTECPIT------------------------------------------------------------------------------------------PSRPVDLTILTTYATAPVTAVSELWVSKEFGRGAVGIGEARPRWGVQGEK--------VRLAVAGRSGSSKMSVWDITEARQILE--------------LECGDRHLAHDLFLSWP 4321
GDVLPG LLGP++GLAFST GDLLF+ SGSS+ YDV SGA LS+ RVF+PG+ V GIDVGRESFGAIFGDKCVR+VDGVPT A A+ +WFRGVA LP+L DRVWDARL+G+ G+G + + G I AVGG R+ +P Q K D G R+RGERAG+G+VAVALAHNSVEVWDWA ARPLRIH+ +GGDPCLLYHARLWGR L +LRVAAGTAFNQVLVW P + + + K +G + GK G + +P + G +LRL GHEGVIFRVAWR DG RL SASDDRTVRVWDVE C G E E + R RLVWTGWGH SRVWDVGF LGIV+ GEDG AILWRE D ++S AP + AT P P+ T KR QLVP A +RGHSGASVWRLAVH+F S+++S G FA G HE R LTL+ATGGND CKLWDLGFEA+ E+ G LWG+T +P D+ AV T + G+ G A V G + AVA+ A PAD + + AA E + PTE S++A E+RL XXXXXXXXXXXL DGSVWWV+DL +GSWQ+VT AA GG+ AEG L S G+SAIAVVG + P A D GE G +S PWRV W GHRSRV ++W VGDA H++ + P G E +G +TAALDTSRL +S LVS G+DGTVAWWEW R+E D R+ A GGS E G + P+LRM+CRA PGAA+TSV ID RR++ C S++ K+ + + NDA G VFCGDTKGNIRCFLEE P G E L AE G+ G+APCLVLKRQHGKDQ V+ Y ISY P P A S S VGTD I V L+I+TTYATAPVT+VS+LWV+ + G G+ G G AR G +G + VRLAVAGRSGSS+MSVWDI E RQ+LE LECGDR+LA DLFL WP
Sbjct: 16 GDVLPGPLLGPVMGLAFSTGGDLLFSCSGSSLRVYDVRSGAPLSATRVFSPGVTVHGIDVGRESFGAIFGDKCVRIVDGVPTRAGDTATC-SWFRGVASLPELGDRVWDARLIGKSGKGTGEGGAKEAKGRTGGIGRG-AVGGVRRIGA---VPRQGARKEVDGG------RRRGERAGVGMVAVALAHNSVEVWDWAGQARPLRIHQAQGGDPCLLYHARLWGRALGELRVAAGTAFNQVLVWCPSQAKNFGPEGVHRKGGEGHGTVGQGDGKPGDPEGVPPCLPGGGVDLLRLKGHEGVIFRVAWREDGTRLVSASDDRTVRVWDVERRCEGGSGXXXXXXENSGEGNGKEXXXXXXXXXXGKTAAREEEGRDGGGRLVWTGWGHTSRVWDVGFASLGIVSCGEDGTAILWREKRDFGGDHSAAIAPYN----ATAPHVGPPSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATLRKRRQGQLVPVATLRGHSGASVWRLAVHDFPPHSAATSGCGGGSSAGAFAGGGFGHESG----RALTLLATGGNDAVCKLWDLGFEASCEK----GGTRHDALWGETPTVPADRHAAAVLTPQAGGEGK----GAAAATVKAHEDGRLLSAAAVAASAPVLPADKTEFQHRSAAXXXXXXXXXXGERGSNKPTEQSTDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIRLX-----XXXXXXXXXXXXXLGDGSVWWVSDLAVGSWQEVTT-----AAKGGMLLPAAEGVLPSDGVSAIAVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPNHAPDRATDHGEDKVGRGGSSSTGPWRVGAAWRGHRSRVTAIWAVGDADHDSGGSRSTSTPIGREGAGXXXXGRCQGFFTAALDTSRLHTSPXXXXXXXXXXXXXXXLVSVGSDGTVAWWEWGGEGGRADEAGRSEVDEREHAAGGS----EPRSGGMGIRPPKLRMVCRAEPGAAVTSVAIDDRRRQLCRRRPRPSSLRKKNSSRRGRDESVGGKAKLEPNTSDNDARGKIGKTPPAEVAAAARAVVFCGDTKGNIRCFLEEXXXXXXXQPLPCVGLDGGXXXXXXXGEAALERGAEPSALGQ---GVAPCLVLKRQHGKDQ-------------------VNHYFISYCYPLPSSPDPVSPSSERRRCAASGGCGVAASSTPPVSAVGTDDGDDASLEIQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFIDSCXXXXXXXXXXXXXXXXXXXVMLSIVTTYATAPVTSVSDLWVTSDGG-GSCGDGVARNGQGGRGARIGAGVGGGVRLAVAGRSGSSRMSVWDIAEGRQLLEVWRVVQVKIVGGFELECGDRNLAQDLFLVWP 1460
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: D8LMQ4_ECTSI (Nucleotide binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ4_ECTSI) HSP 1 Score: 622 bits (1603), Expect = 8.470e-187 Identity = 546/1448 (37.71%), Postives = 634/1448 (43.78%), Query Frame = 2
Query: 740 GDVLPGSLLGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLAVCGIDVGRESFGAIFGDKCVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGL-----PCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVD------MLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVECSERDGDVRHK---------------------------------------------GER------------------LETKERSFNE-------------------------------------------RLVWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWREN-DHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSG--ICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDLGFEATLERRRLWGKRAGGMLWGQTEVIPIDQGTAVSTDENTAVGETQENGHP-------------------APVVTTLPPGTTGTPPAVASGATPPADTNKKRSERAAAAVNEGPKSNPTEPSSNAPSPRTPSQQAISGDRRHLRRGRQGPSVGGASRRQNDRRRQKPAVVREVRLVRGCSRTTXXXXXXXXXXXLADGSVWWVADLHIGSWQQVTVSTGHAAAAGGVTAEGYLSSSGISAIAVVG---LLEQIHTEENSNFGSDSDGKVAAGKKGGRCGHEVAIVAGRGDGRLFLLTQGRTPPTVISEANF-----------------------------SDFKPGSAADGGE--GGRTAS-PPRPWRVSTVWVGHRSRVISVWIVGDAAHE----TPPNAPEGESSG-------------YTAALDTSRLSSSSRSGGLCRGGLYGALVSAGADGTVAWWEWA----RAE-------DVRDVADGGSPSSCEQAGGEVTACAPRLRMLCRAGPGAAITSVTIDGRR-------------------------QRYCHSVKTKHRDAEQAKNDAPSLAG-------------AVFCGDTKGNIRCFLEEPRAGSRRSEGGVGDGEEGRLSAEEDLRGRPK-KGLAPCLVLKRQHGKDQITRLALRGDCLFSAGHDGQVHQYAISYSAPYFDRP-----AESHRHGSPVGTDSQTPTECPITPSRPVDLTILTTYATAPVTAVSELWVSKEFGRGAVGIGEARPRWGVQGEK--------VRLAVAGRSGSSKMSVWDITEARQILELECGDRHLAHDLFLSWP 4321
GDVLPG LLGP++GLAFST GDLLF+ SGSS+ YDV SGA LS+ RVF+PG+ V GIDVGRESFGAIFGDKCVR+VDGVPTGA A A +WFRGVA LPDL DRVWDARL+G+ G G GE GG P Q GK D G R+RGERAG+G+VAVALAH SVEVW+WA ARPLRIHR +GGDPCLLYHARLWGR L +LRVAAGTAFNQVLVWSPG+ + + +R K G G D LP R V VLRL GHEGVIF DG RL SAS+DRTVRVWDVE S +G G+R +E ++ F RLVWTGWGHASRVWDVGF LG+V+ GEDG AILWRE D ++S AP + AT P P+ + QLVP A +RGHSGASVWRLAVH+F S++ S G A S HE R R LTL+ATGGND +CKLWDLGFEA+ ER G G LWG+T +P D+ A APV+ PAD TE + RG S + XXXXXXXXXXX G A AEG+LS G+SAIAVVG L Q + + S+ P A D GE GR P PWRV W GHRSRV ++W VGDA H+ P+ P G +TAALDTSRL +SS +GG+ GALVSAGADGTVAWWEW RA+ D R+ A GGS E G + P+LRM+C+A PGAA+TSV ID R R V + +DA G VFCGDTKGNIRCFLEE + S DG G + E + R +G+APCLVLKRQHGKDQI+R+AL G CLFSAGHDGQV+ Y ISYS P P + R G+ G C + + A E+ + G G+ G G A G +G + VRLAVAGRSGSS+MSVWDITE RQ+LELECGDRHLA DLFLSWP
Sbjct: 16 GDVLPGPLLGPVMGLAFSTGGDLLFSCSGSSLRVYDVRSGAPLSATRVFSPGVTVHGIDVGRESFGAIFGDKCVRIVDGVPTGAGDTA-ACSWFRGVASLPDLEDRVWDARLIGKSGRG----TGEGGGKGRTGGIXXXXXXXXXXXXXAPRQGVGKESDGG------RRRGERAGVGMVAVALAHTSVEVWNWAGQARPLRIHRAQGGDPCLLYHARLWGRALGELRVAAGTAFNQVLVWSPGQPTNFVPEGVRRKGGEGHGTVGQGDGNPGDPEEVPPCLPGRGVDVLRLKGHEGVIFSE----DGMRLGSASEDRTVRVWDVE-SPCEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAVTVGKRTHAETVIGSNAVSVSYAAVEVAKKIFGNVSGKEIVVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDGGGRLVWTGWGHASRVWDVGFASLGVVSCGEDGTAILWREKRDFGGDHSAAIAPCN----ATAPHVGPPSXXXXX-----------XXXXXXKQGQLVPVATLRGHSGASVWRLAVHDFPPHSAAMSGCGGGSSADANAGRGSGHESR----RALTLLATGGNDASCKLWDLGFEASCER----GGIRHGALWGETPTVPADRHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVL--------------------PADE--------------------TELQHRSXXXXXXXXXXXXXXXXXXXRG---------SNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGKLLPA----AEGFLSCDGVSAIAVVGGRRLPGQRGSPSEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNHAPYRATDHGEYDAGRGGPFPTGPWRVGAAWRGHRSRVTAIWAVGDADHDGGGSRSPSTPLGXXXXXXXXXXXXRCQFFFTAALDTSRLRTSSGAGGI----FSGALVSAGADGTVAWWEWGGEGGRADEAGRSGVDEREHAAGGS----EPRSGGMGIRPPKLRMVCQAEPGAAVTSVAIDDRXXXXXXXXXXXXXXXXXXXXXXXXXXDREERVVGKAELEPNTPDDDARGKVGRTPPAEVAAAARAVVFCGDTKGNIRCFLEEDKEEDEPSPCVGLDGGGGEAAYERGVEPRALGQGVAPCLVLKRQHGKDQISRMALWGGCLFSAGHDGQVNHYVISYSYPLPSSPDPVSPSSERRRGTASGG-------CGV--AXXXXXXXXXXXXXXXXDAFLEI---QGDGGGSCGDGVAHNGKGDRGARSVAGVGGGVRLAVAGRSGSSRMSVWDITEGRQLLELECGDRHLAQDLFLSWP 1351
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: D7FVQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ9_ECTSI) HSP 1 Score: 138 bits (348), Expect = 3.340e-33 Identity = 86/166 (51.81%), Postives = 104/166 (62.65%), Query Frame = 2
Query: 5864 MTSSKKPVLCLAHARVRMAPALPSSSGFPSPAPLDVVDLIATGDTGGTITVWEFLSGGGXX----GILPPKEGEIFQQGVSDVRGGFVHRGPAGKRRGGTEMVAEETRGGERSYCPGLVPMLEYRAHQMGVLCMAVHVPPAG-GRMVIISGGDDQAVCVAEVELRE 6346
M + K+PVLCLAHARV PS++ +V+DLIATGDTGGT+TVW+F XX LP GE FV+RGPAG+RRGG E G C LVP+LEYRAHQMGVLCMAVHVP GR+V+++GGDDQA+CVAE+E+ E
Sbjct: 1 MAAGKRPVLCLAHARV-----WPSATHQQQH---EVLDLIATGDTGGTVTVWQFYGXXXXXXXXXSTLPSDHGE------------FVYRGPAGRRRGGAARTGPE--GAAAPPCHALVPVLEYRAHQMGVLCMAVHVPAGERGRVVVVTGGDDQAICVAELEVAE 144
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A662WW86_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW86_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.930e-32 Identity = 154/560 (27.50%), Postives = 210/560 (37.50%), Query Frame = 2
Query: 764 LGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGL-------AVCGIDVGRES-----FGAIFGDK---CVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRG---GDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVECSERDGDVRHKGERLETKERSFNERLV-------WTGWGHASRVWDVGFTRLGIVTSGEDGAAILWRENDHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSGICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDLGFEATLERRRLWGKRAGGML-WGQTEVIPIDQGTAVST 2365
LG + LAFS DG LL+ G G ++ Y +SG +L + T G+ A+ G G + GA FG K C + + P A TL G RL D V+D +L +ST A ++ L L AV LAHN V++WD P+ TR + C+LY GR+LDDL VA+GT F Q+L+W+P E G + D+LP V RL H+GV+F++AW D R LAS SDDRTV++W D + E+L + + S L+ + WGH +R+WDV F G+ T+ EDG LW + G+ +AT ++GH G VWR AVH L+ATGG DGA KLWD L R+ + A G W QT IP+ +G S+
Sbjct: 13 LGAVTLLAFSADGSLLYVGVGPTVFLYATVSGELLGQHELLTRGILHGCDVVALAGSSEGDSASNPTFVGAFFGQKRVACFQDLPQTPEAAQTLGELTQL--GKPRL--FCDWVFDVQL--------------LSTDYASAESKTL----------------------------------LAAVGLAHNLVQIWD------PVHNEITRSVQCAERCILYALAFHGRSLDDLVVASGTVFQQILLWNPME--------------------NGDDSVTSDVLP-----VQRLHAHDGVLFKLAWSSDARLLASVSDDRTVQLWS-------NDGKPTTEQLASPQASSRSELLASEYSPAFRAWGHTARLWDVAFWADGVATTSEDGLCKLWDLD------------GNCVAT------------------------------------------LQGHVGRHVWRAAVHP---------------------------------SQRLLATGGGDGAVKLWD------LTRQMMSSSVAPGSNDWCQTIRIPVAEGATPSS 389
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A0W8CJ94_PHYNI (WD repeat-containing protein 6 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CJ94_PHYNI) HSP 1 Score: 145 bits (365), Expect = 7.560e-31 Identity = 134/509 (26.33%), Postives = 196/509 (38.51%), Query Frame = 2
Query: 764 LGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLA----VCGIDVGRESF-GAIFGDKCVRVVDGVPTGADTLASAVAWFRGVARLPDLN------DRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVECSERDGDVRHKGERLETKERSFNERL-VWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWRENDHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSGICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDL 2254
LG + ++FS++G LL+ G G ++ Y +G +LS V T G+ + G+ ESF GA FG K V +P + RG+ +L L D V+D +L+ E E+K +L L AV LAHN V++WD N + + + C+LY GR+ DDL VA+GT F Q+L+W+P + D T++ + RL H+GV+F++ W D R LAS SDDRTV++W + E + H L E +E V+ WGH++R+WDV F + G+VTS EDG LW + G+ +AT ++GH G VWR+AVH L ++A+GG DGA KLWD+
Sbjct: 12 LGAVTLVSFSSNGSLLYVGVGPTVFLYATATGELLSKHAVLTRGILHGCDIVGLPGSNESFAGAFFGQKRVSCFQDLPQAPEAA-------RGLEKLTALGIPKVFCDWVFDVQLLTNEFASAENK--------------KL----------------------------------LAAVGLAHNFVQIWDPVRNDI---LRSVQCAERCILYALVFHGRSFDDLVVASGTVFQQILLWNP----------MENGDNETNIAIEPAQ---------------RLHAHDGVLFKLTWSSDARSLASVSDDRTVQLWSHD-GETTVEQLHLSRTLTRAELLASEYSPVFRAWGHSARIWDVSFWKHGVVTSSEDGLCKLWDLD------------GNCVAT------------------------------------------LQGHMGKHVWRVAVHPL---------------------------------LEMIASGGGDGAVKLWDI 349
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: H3GJ35_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ35_PHYRM) HSP 1 Score: 134 bits (338), Expect = 7.140e-30 Identity = 128/507 (25.25%), Postives = 187/507 (36.88%), Query Frame = 2
Query: 764 LGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLA-------VCGIDVGRESF-GAIFGDKCVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVW--DVECSERDGDVRHKGERLETKERSFNERLVWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWRENDHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSGICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDL 2254
LG + +AFS++G LL+ G G +I Y +G +L V T G+ + G + F GA FG K V +P + A + F + + D V+D +L+ DE G+E K LVAV LAHN V++WD + + C+LY GR+LD+L VA+GT F Q+L+W+P + + E E RL H+GV+F++AW D R LAS SDDRTV++W + + + ++ R E E ++ V+ WGH +R+WDV F G+ T+ EDG LW + G+ +AT ++GH G VWR VH ++ATGG DGA KLWD+
Sbjct: 9 LGAVTLVAFSSNGSLLYVGVGPTIFLYSTATGELLGEHEVLTRGILHGCDVVEILGSSTAKVEFAGAFFGQKRVSCFHNLPQTPEA-AQGIEEFAVLGKPKVFCDWVFDVQLLA----------------------------------------DEFASGKESMKI-------LVAVGLAHNLVQIWDPCA-------------ERCILYALAFHGRSLDELVVASGTVFQQILLWNPMDNGSEEPNSAVEP-------------------------AQRLHAHDGVLFKLAWSSDARSLASVSDDRTVQLWSNNGKTTAEQLNLSRTLNRAELLEGEYSP--VFRSWGHTARIWDVSFWECGVATASEDGLCKLWDFD------------GNCVAT------------------------------------------LQGHMGRHVWRAGVHP---------------------------------SQKVIATGGGDGAVKLWDI 340
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A833THE9_PHYIN (WD domain G-beta repeat n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833THE9_PHYIN) HSP 1 Score: 140 bits (354), Expect = 1.500e-29 Identity = 140/504 (27.78%), Postives = 197/504 (39.09%), Query Frame = 2
Query: 782 LAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLAVCGIDVGR-----ESF-GAIFGDKCVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLR---IHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWD---VECSERDGDVRHKGERLETKERSFNERL-VWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWRENDHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSGICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDL 2254
++FS DG LL+ G G ++ Y +G +L V T G+ + G D+ R +SF GA FG K V +P + A + +A+ D V+D +L ++T A+ E L L AV LAHN V++WD PLR + + + C+LY GR+LD+L VA+GT F Q+L+W+P E GK + L T V RL H+GV+F++ W D R LAS SDDRTV++W + +E+ H L E NE V+ WGH++RVWDV F G+VT+ EDG LW + G+ IAT ++GH G VWR AVH LT++A+GG+DGA KLWD+
Sbjct: 18 VSFSYDGSLLYVGVGPTVFLYATGTGQLLGKHEVLTRGV-LHGCDIVRLSALDKSFVGAFFGQKRVSCFQNLPQTCEA-ACELEELAVLAKPKVFCDWVFDVQL--------------LTTDFALTKNENL----------------------------------LAAVGLAHNLVQIWD------PLRNDILRSVQCAERCILYALAFHGRSLDELVVASGTVFQQILLWNPME---------------------NGK----NALNTAVEPAQRLHAHDGVLFKLTWSSDARSLASVSDDRTVQLWSHNGIITAEQ----LHLPRTLTRAELLANEYSPVFRAWGHSARVWDVSFWEHGVVTASEDGLCKLWDLH------------GNCIAT------------------------------------------LQGHMGKHVWRAAVHP---------------------------------SLTMIASGGSDGAVKLWDI 349
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A0P1A6N5_PLAHL (WD-repeat protein WDR6, WD repeat superfamily n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6N5_PLAHL) HSP 1 Score: 140 bits (352), Expect = 2.590e-29 Identity = 133/517 (25.73%), Postives = 189/517 (36.56%), Query Frame = 2
Query: 746 VLPGSLLGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLAVCGIDV---------GRESFGAIFGDKCVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSP----GEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVECSERDGDVRHKGERLETKERSFNE-RLVWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWRENDHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSGICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDL 2254
VL LG + ++FS+ G LL+ G G I Y L V G+ + G D+ + GA +G K V +P D A + F+ + + D V+D L+ +IST +N G L AV LAHN V++W+ SN +H + + C+LY GR+LDDL VA+GT F Q+L+W+P EVS ++P + RL H+GV+ ++ W D R LAS SDDRTV++W + E + HK + E N ++ WGH++R+WDV F G+ T+ EDG LW N H A ++GH G +VWR+AVH L L+ATGG DGA KLWD+
Sbjct: 6 VLKQEFLGSVTLVSFSSTGSLLYVGVGPVIFLYSTTDCDFLGDHNVLMRGI-LHGCDITDIPVSSTTSKSFVGAFYGQKRVACFQNLPQTPDA-ARGLEHFQVLGKPKVFCDWVFDVVLL----------TDDIST---------INDGNVL-----------------------------AAVGLAHNLVQIWNPISNTI---LHSLQCAERCILYALAFHGRSLDDLVVASGTVFQQILLWNPMEHADEVSDKPIEPAQ-----------------------------RLHAHDGVLLKLVWSLDARFLASVSDDRTVQLWSHD-RELTNERLHKPSLINRAELLANGYTTLFRAWGHSARIWDVAFWERGLATASEDGLCKLWNRNGHCV------------------------------------------------------ATLQGHMGRNVWRIAVHP---------------------------------SLNLVATGGGDGAAKLWDI 352
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A2D4BZ66_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ66_PYTIN) HSP 1 Score: 137 bits (346), Expect = 1.330e-28 Identity = 117/388 (30.15%), Postives = 160/388 (41.24%), Query Frame = 2
Query: 755 GSLLGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLAVCGIDVGR---------ESFGAIFGDKCVRVVDGVP-TGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVECSERDGDVRHKGERLETKERSFNERLVWTG---------WGHASRVWDVGFTRLGIVTSGEDGAAILW 1861
G +G + L FS DG LLF G G+++ YD SG +L++ VF G+ + G D R S FG K + V VP T L GV++ D V+D R++ A E + SS+ +VA+ LAHN +++WD N ++ T + C+LY +GR DL VAAGT F QVL+W+P +D D R RL GH+GVIF++ W D R+LAS SDDRTV++W SE E S +R W WGH +R+WDV FT +GIVT+ ED A +W
Sbjct: 17 GEYIGAVTLLHFSHDGSLLFVGVGAALYVYDTRSGELLATYAVFPRGI-LHGRDYVRIPATNDREASSLAVFFGQKRLVCVRDVPETREHVLTQRELQRVGVSKT--CQDWVFDVRIL----------AEETTASSSA--------------------------------------FPVVAIGLAHNYIQLWDPVQNHVLRSVYCT---ERCILYSLSFFGRRSADLMVAAGTVFQQVLLWAP-------------RDETHDQADRADPQ-------------QRLHGHDGVIFKLEWSSDARKLASVSDDRTVQLWSHAPSE-------------DSESSSFDRATWLSTPYVSQFRAWGHTARLWDVRFTDVGIVTTSEDTMARVW 311
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Match: A0A3R7YE74_9STRA (Uncharacterized protein n=3 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7YE74_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.720e-28 Identity = 144/524 (27.48%), Postives = 205/524 (39.12%), Query Frame = 2
Query: 764 LGPILGLAFSTDGDLLFAGSGSSISTYDVLSGAVLSSARVFTPGLAVCGIDVGR----ESF-GAIFGDK---CVRVVDGVPTGADTLASAVAWFRGVARLPDLNDRVWDARLVGREGEGEEHKAGEISTSSAVGGAERLNGGKGLPCQVEGKTKDEGERGEEGRKRGERAGMGLVAVALAHNSVEVWDWASNARPLRIHRTRGGDPCLLYHARLWGRTLDDLRVAAGTAFNQVLVWSPGEVSTTELKPLREKDGATDLEARGGKAGKVDMLPTRVVGVLRLSGHEGVIFRVAWRGDGRRLASASDDRTVRVWDVECSERDGDVRHKGERLETKERSFNERL-VWTGWGHASRVWDVGFTRLGIVTSGEDGAAILWRENDHVYENSTTFAPGDTIATATRPTPAIPAATAAMTTSALATPPEPRLGVKREVAQLVPAAVMRGHSGASVWRLAVHEFASRSSSSSSSSGICKRFAAGDSTHEERKTDWRGLTLMATGGNDGACKLWDLGFEATLERRRLWGKRAGG 2308
LG + L+FS+DG LL+ G G +I Y +G ++S V T G+ + G D R +F G FG K C + P A TL + + + D V+DA L+ + E++K +L LVAV LAHN V++WD + R + + + + C+LY GR+LD+L VA+GT F Q+L+W+P E + KD T +E V RL H+GVIF++AW D R LAS SDDRTV++W + + D+ H L E E V+ WGH++R+WDV F G+VT EDG + LW G+ +AT ++GH G +VWR+AV ++ATGG DGA KLWD+ RR+L GG
Sbjct: 11 LGAVTLLSFSSDGSLLYVGVGPTIFLYATATGKLMSQHTVLTRGI-LHGCDFVRFPDTNAFAGVFFGQKRVSCFHNLPQTPEDARTLEKLMT----LGKPNVFCDWVFDAHLLTDDFASEQNK--------------KL----------------------------------LVAVGLAHNFVQIWDPVT--RDI-LRSVQCAERCILYALAFHGRSLDELVVASGTVFQQILLWNPMENAL--------KDVNTAIEP-----------------VQRLHAHDGVIFKLAWSSDARSLASVSDDRTVQLWSNNGNIK-VDLLHLSRTLNRDELLQCEYSPVFRAWGHSARIWDVSFWERGVVTVSEDGLSKLWDLE------------GNCLAT------------------------------------------LQGHMGRNVWRVAVLP---------------------------------SQKMIATGGGDGAVKLWDI-------RRQLMSSSDGG 358 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.32.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig159.32.5 >prot_P-littoralis_Contig159.32.5 ID=prot_P-littoralis_Contig159.32.5|Name=mRNA_P-littoralis_Contig159.32.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2218bp MLDCWRLQFQPRTVRGLVCGSMEVVTNSIPSGAGDVLPGSLLGPILGLAFback to top mRNA from alignment at P-littoralis_Contig159:144615..158878+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig159.32.5 ID=mRNA_P-littoralis_Contig159.32.5|Name=mRNA_P-littoralis_Contig159.32.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=14264bp|location=Sequence derived from alignment at P-littoralis_Contig159:144615..158878+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig159:144615..158878+ >mRNA_P-littoralis_Contig159.32.5 ID=mRNA_P-littoralis_Contig159.32.5|Name=mRNA_P-littoralis_Contig159.32.5|organism=Pylaiella littoralis U1_48|type=CDS|length=6654bp|location=Sequence derived from alignment at P-littoralis_Contig159:144615..158878+ (Pylaiella littoralis U1_48)back to top |