prot_P-littoralis_Contig159.15.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig159.15.1
Unique Nameprot_P-littoralis_Contig159.15.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
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BLAST of mRNA_P-littoralis_Contig159.15.1 vs. uniprot
Match: A0A6H5KGH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH8_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 5.480e-38
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 0 
Query:    1 MVIQYAFSWCTTYTPAGQ-TTDEEECAGYEAMWAVGLAIVMGVLFCCCFCGARKEEGTTAEQTPILATEASAPPTAQAYAVEATAPFK-ETTFASYADNGT 99
            MVIQYA  WCTT T  G+ TTDE ECAGYEA WA+ LAIVMG++FCCCFCG RKE+GT AEQ PILATEA  PP AQAYAVEA+AP+  + T +SYAD  T
Sbjct:   90 MVIQYALPWCTTETAGGRVTTDESECAGYEAAWALVLAIVMGIIFCCCFCGVRKEDGTQAEQAPILATEA--PPPAQAYAVEASAPYTTKNTVSSYADRST 188
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGH8_9PHAE5.480e-3870.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig159contigP-littoralis_Contig159:67834..77299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig159.15.1mRNA_P-littoralis_Contig159.15.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig159 66689..79324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig159.15.1 ID=prot_P-littoralis_Contig159.15.1|Name=mRNA_P-littoralis_Contig159.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MVIQYAFSWCTTYTPAGQTTDEEECAGYEAMWAVGLAIVMGVLFCCCFCG
ARKEEGTTAEQTPILATEASAPPTAQAYAVEATAPFKETTFASYADNGT*
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