prot_P-littoralis_Contig159.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig159.14.1
Unique Nameprot_P-littoralis_Contig159.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length163
Homology
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: D8LMP5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP5_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.350e-44
Identity = 86/146 (58.90%), Postives = 103/146 (70.55%), Query Frame = 0
Query:   15 VNVSRPSPKEAD-NGIDEGEHCLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSSCPACRAEVRHIKKTLSMAEIEEKNRNWKPPTKAQMKRDKRKSAIGKRPVRPYIIAKTIRVRFKQSEEQARQNRMAPHPQAAGGFLHDQ 159
            VN + P  K  +   +D+   C IC++ LP+  RGI++CGHVFC  C+ +WVKKQQ+SCP CRA+V HIKKTLS+AE  EKN N KP TKAQ+KR KRKS IGK   +P I  + IRV  K S EQ RQN MAPHPQA GGFLH Q
Sbjct:   36 VNAAHPRTKRKNPEKVDDKARCPICQDLLPEENRGIVKCGHVFCLKCVLQWVKKQQNSCPTCRAKVCHIKKTLSLAEALEKNANRKPLTKAQLKRTKRKSTIGKPFPKPDITTEKIRVHKKVSREQIRQNAMAPHPQAPGGFLHAQ 181          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: A0A6H5JQU9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU9_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 2.310e-42
Identity = 86/158 (54.43%), Postives = 105/158 (66.46%), Query Frame = 0
Query:   15 VNVSRPSPKEAD-NGIDEGEHCLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSSCPACRAEVRHIKKTLSMAEIEEKNRNWKPPTKAQMKRDKRKSAIGKRPV------------RPYIIAKTIRVRFKQSEEQARQNRMAPHPQAAGGFLHDQ 159
            VN +RP  +  +    D+G+ C IC++ LP+  RGI++CGHVFC  C+ +WVKKQQ+SCP CRAEV HIK+TLS AE  EKN + KPP KAQ+KR KRKSA+GK               +P I  + IRVR K S EQ RQN  APHPQA GGFLH Q
Sbjct:   60 VNAARPRTRRKNPEKDDDGDRCPICQDLLPEENRGILKCGHVFCLKCVLQWVKKQQNSCPTCRAEVCHIKRTLSSAEALEKNADRKPPRKAQLKRAKRKSAVGKPSPGDRYSESDVLQQKPDITTEKIRVRKKVSREQIRQNATAPHPQAPGGFLHAQ 217          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.020e-23
Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 0
Query:   35 CLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSSCPACRAEVRHIKKTLSMA-EIEEKNRNWKPPT---------KAQMKRDKRKSAIGKRPVRPYIIAKTIRVRFKQSEEQARQNRMAPHPQAAGGFLHDQ 159
            C IC ++LP++ RG++ CGHVFCF CIH+W K   S CP CR +++ I KTLS A E + K    KP           + Q+KR + + +  K P   ++  KT+RVR K  +    Q R APHPQA GG+++ Q
Sbjct:  176 CAICCDKLPNLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKAKGETRKPVVSQRGMKKKPRKQLKRARHRDSRAKNPASGFVT-KTVRVRPKSLKMTPAQQRAAPHPQARGGWMYVQ 308          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: D7FGW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW0_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.240e-18
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0
Query:   23 KEADNGIDEGEHCLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSS--CPACRAEVRHIKKTLSMAEIE-EKNRNWKPPTKAQMKRDKR-----KSAIGKRPVRPYIIAKTIRVRFKQSEEQARQNRMAPHPQAAGGFLH 157
            K A +   +GE C+IC E LPD+ RGII CGH FCF CIH W   +  S  CP+CR     IKKTLS  +IE EK RN +                 ++A  K+PV   I  K +RVR    ++QA +     HP+AAGG ++
Sbjct:   46 KAAADDAKKGELCIICLEALPDIERGIIACGHTFCFGCIHDWASNRGDSALCPSCRFPFNKIKKTLSPKDIEKEKLRNERDXXXXXXXXXXXXXXXXRAARVKQPV-DKIFVKDVRVRKMSKKKQAIEEARTVHPEAAGGSMN 187          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.930e-18
Identity = 54/144 (37.50%), Postives = 75/144 (52.08%), Query Frame = 0
Query:   16 NVSRPSPKEADNGIDEGEHCLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSS--CPACRAEVRHIKKTLSMAEIEEKNRNWKPPTKAQMKRDKRKSAIGKRPVRPYIIAKTIRVRFKQSEEQARQNRMAPHPQAAGGFLH 157
            +V R     AD+   +GE C+IC+E LPD+ RGII CGH FCF CIH W  +   S  CP+CR     IKKTLS  ++E               ++K ++ + K      I  K IRVR    +++A +     HP AAGG ++
Sbjct:   40 DVERTKKAAADDA-KKGELCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKDVE---------------KEKLRNEVDK------IFVKDIRVRKMSKKKKAIEEARTLHPDAAGGSMN 161          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 3.620e-14
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   35 CLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSSCPACRAEVRHIKKTLSMA-EIEEKNRNWKP 100
            C IC ++LPD+ RG++ CGHVFCF CIH+W K   S CP CR +++ I KTLS A E + K    KP
Sbjct:   80 CAICCDKLPDLERGVLSCGHVFCFACIHQWTKNS-SICPGCRVQIKRITKTLSPADEAKSKGETRKP 145          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: A0A1J3G4G9_NOCCA (RING-type domain-containing protein (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3G4G9_NOCCA)

HSP 1 Score: 53.5 bits (127), Expect = 1.860e-5
Identity = 26/84 (30.95%), Postives = 41/84 (48.81%), Query Frame = 0
Query:   16 NVSRPSPKEADNGIDEGEHCLICRERLPDVYRGIIQCGHVFCFVCIHKWV-----KKQQSSCPACRAEVRHIKKTLSMAEIEEK 94
            N ++P   EA   +     C+IC        RGI+ CGH FC+ CI KWV     +++ ++CP C++    I K       ++K
Sbjct:   87 NFNKPEEAEATKKVSAQVSCIICLTEFSST-RGILPCGHRFCYSCIQKWVDLLVSERKSTTCPLCKSSFIAITKIEDAGSFDQK 169          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: F0ZEL4_DICPU (RING-type domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZEL4_DICPU)

HSP 1 Score: 53.9 bits (128), Expect = 2.010e-5
Identity = 23/50 (46.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:   35 CLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSSCPACRAEVRHIKK 84
            C IC  +L       I C H FC+ CIHKW K + ++CP CRAE   IK+
Sbjct:  369 CSICYNKLNTTNASTIDCSHQFCYKCIHKWCK-EDNTCPLCRAEFYRIKR 417          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: UPI001E018B19 (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001E018B19)

HSP 1 Score: 53.5 bits (127), Expect = 2.160e-5
Identity = 25/61 (40.98%), Postives = 37/61 (60.66%), Query Frame = 0
Query:   25 ADNGI-----DEGEHCLICRERLPDVYRGIIQCGHVFCFVCIHKWVKKQQSSCPACRAEVR 80
            AD G+     +    C++C   + D   G  +CGHVFC+ CIH WVK+++  CP CRA++R
Sbjct:  230 ADPGVLPYIPENSRTCMLCLSLMKDPACG--ECGHVFCWTCIHDWVKERKE-CPLCRADMR 287          
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Match: A0A6P4BUW5_ARADU (uncharacterized protein LOC107471428 n=9 Tax=Arachis TaxID=3817 RepID=A0A6P4BUW5_ARADU)

HSP 1 Score: 52.8 bits (125), Expect = 4.870e-5
Identity = 25/65 (38.46%), Postives = 35/65 (53.85%), Query Frame = 0
Query:   35 CLICRERLPDVYRGIIQCGHVFCFVCIHKWVK-----KQQSSCPACRAEVRHIKKTLSMAEIEEK 94
            C+IC        RGI+ CGH FCF CIH W       ++ ++CP C+A  + IKK      I++K
Sbjct:  295 CVICHADFSAT-RGILPCGHRFCFECIHSWANHRTSTRKNATCPLCKASFQSIKKVEHADRIDQK 358          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LMP5_ECTSI1.350e-4458.90RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQU9_9PHAE2.310e-4254.43RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGV7_ECTSI5.020e-2341.48Similar to PHD finger family protein, partial n=1 ... [more]
D7FGW0_ECTSI1.240e-1841.26RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L829_9PHAE3.930e-1837.50RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2A7_9PHAE3.620e-1452.24RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1J3G4G9_NOCCA1.860e-530.95RING-type domain-containing protein (Fragment) n=2... [more]
F0ZEL4_DICPU2.010e-546.00RING-type domain-containing protein n=1 Tax=Dictyo... [more]
UPI001E018B192.160e-540.98uncharacterized protein n=1 Tax=Ogataea philodendr... [more]
A0A6P4BUW5_ARADU4.870e-538.46uncharacterized protein LOC107471428 n=9 Tax=Arach... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 35..75
e-value: 4.6E-5
score: 32.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 34..76
e-value: 2.2E-9
score: 37.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 35..76
score: 13.226928
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 15..111
e-value: 8.7E-17
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..163
NoneNo IPR availableCDDcd16449RING-HCcoord: 35..75
e-value: 8.25771E-10
score: 49.7733
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 29..84
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 52..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig159contigP-littoralis_Contig159:61101..63479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig159.14.1mRNA_P-littoralis_Contig159.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig159 61101..63481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig159.14.1 ID=prot_P-littoralis_Contig159.14.1|Name=mRNA_P-littoralis_Contig159.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=163bp
TATATATATATSVVVNVSRPSPKEADNGIDEGEHCLICRERLPDVYRGII
QCGHVFCFVCIHKWVKKQQSSCPACRAEVRHIKKTLSMAEIEEKNRNWKP
PTKAQMKRDKRKSAIGKRPVRPYIIAKTIRVRFKQSEEQARQNRMAPHPQ
AAGGFLHDQAAEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS