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Homology
BLAST of mRNA_P-littoralis_Contig159.91.2 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 7.280e-5 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0
Query: 243 LQGKYRYDEADSLYADATEIRERTLGPDHPTMASLLNSRAGLLESQ 288
+QG+Y EA+ LYA ATEI ER LGP+HP +A+ LN+RAGLLE Q
Sbjct: 656 IQGEYA--EAEPLYARATEIWERALGPEHPLVATALNNRAGLLERQ 699
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002151 | Kinesin light chain | PRINTS | PR00381 | KINESINLIGHT | coord: 525..545
score: 59.05
coord: 416..434
score: 44.74
coord: 481..498
score: 54.44
coord: 560..581
score: 33.64 |
| IPR019734 | Tetratricopeptide repeat | SMART | SM00028 | tpr_5 | coord: 527..560
e-value: 0.65
score: 19.0
coord: 317..350
e-value: 47.0
score: 9.1
coord: 485..518
e-value: 0.0052
score: 26.0
coord: 443..476
e-value: 0.0028
score: 26.9
coord: 611..644
e-value: 0.0019
score: 27.5
coord: 401..434
e-value: 0.58
score: 19.2
coord: 569..602
e-value: 120.0
score: 5.6
coord: 359..392
e-value: 20.0
score: 12.4
coord: 275..308
e-value: 0.023
score: 23.9 |
| IPR019734 | Tetratricopeptide repeat | PROSITE | PS50005 | TPR | coord: 611..644
score: 8.0244 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 513..665
e-value: 5.6E-53
score: 181.9
coord: 352..512
e-value: 2.0E-63
score: 216.2 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | Tetratricopeptide repeat domain | coord: 227..351
e-value: 1.3E-23
score: 85.3 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 353..557 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 246..349 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | SUPERFAMILY | 48452 | TPR-like | coord: 520..641 |
| None | No IPR available | PFAM | PF13374 | TPR_10 | coord: 442..483
e-value: 2.3E-7
score: 30.5
coord: 242..272
e-value: 1.3E-5
score: 24.8 |
| None | No IPR available | PFAM | PF13424 | TPR_12 | coord: 568..642
e-value: 6.6E-18
score: 64.8
coord: 274..349
e-value: 3.9E-17
score: 62.3
coord: 358..432
e-value: 1.2E-18
score: 67.2
coord: 484..559
e-value: 9.8E-20
score: 70.6 |
| None | No IPR available | PANTHER | PTHR45783:SF3 | KINESIN LIGHT CHAIN | coord: 472..574
coord: 562..659 |
| None | No IPR available | PANTHER | PTHR45783:SF3 | KINESIN LIGHT CHAIN | coord: 354..485 |
| None | No IPR available | PANTHER | PTHR45783:SF3 | KINESIN LIGHT CHAIN | coord: 234..386 |
| None | No IPR available | PANTHER | PTHR45783 | KINESIN LIGHT CHAIN | coord: 472..574
coord: 562..659
coord: 354..485 |
| None | No IPR available | PANTHER | PTHR45783 | KINESIN LIGHT CHAIN | coord: 234..386 |
| IPR010069 | Toxin CdiA-like, Filamentous hemagglutinin motif repeats | TIGRFAM | TIGR01731 | TIGR01731 | coord: 569..584
e-value: 1.4
score: 7.0
coord: 527..541
e-value: 0.75
score: 7.9 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig159.91.2 ID=prot_P-littoralis_Contig159.91.2|Name=mRNA_P-littoralis_Contig159.91.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=667bp
MAQDLHGCSLGKMKSVLDAFIRVHKAAGDAETKRGLTLLDLCQRVITAVL
NEMNTVAERGLPRTRNMDWVLAQLQSVMDDVATFVESLAHERPTALRRVL
YKLGIVAENPPALFDSLEVTLRGILAVLQSRDALPNLPTVGNAAPIPDER
QDSPALPLPWDAYEVAQSLHDFAEQLGRSQEQLPSQENLNNFQAGEALCR
QAVKIWEHFLWRSHPQLAQGYATLGGLIEQQMAAKTLGWWSRLQGKYRYD
EADSLYADATEIRERTLGPDHPTMASLLNSRAGLLESQGKYAEAEPLYKR
SLAIDEKVYGPDHPEVATDLDNWAGLLKSQGKNAEAEPLYKRSLAIDEKV
YGPDHPEVATVLKNWAGLLESQGKYDEAGPLYERSLAICEKAYGLDHPAV
ATALNNRAGLLESQGKYGEADPLYLRAIEIGEKTLGPDHPHLATRFNNRA
QLLRAQGKYPEAEPLYKRAQEIFEKSLGQDHPNVATILNNRAELLGAQGK
YTEAEPLYERAQAIREKVLSSDHPDVASSLNNRAGLLESQGKYDEAGPLY
ERSLAIREKVYGLDHPAVATALNNRAGLLKAQGNYAEAVLLNERATEIWM
KALGPEHPTVATALNNRAVLLHKQEKYTEAIPLLERALSIRTKKLGEDHP
YTVGTRNSLEILRKEV* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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