mRNA_P-littoralis_Contig1582.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1582.5.1
Unique NamemRNA_P-littoralis_Contig1582.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: Q9G924_OCHDN (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Ochromonas danica TaxID=2986 RepID=Q9G924_OCHDN)

HSP 1 Score: 232 bits (591), Expect = 5.650e-64
Identity = 193/490 (39.39%), Postives = 256/490 (52.24%), Query Frame = 1
Query:  388 FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVFL*LLYQKIHVLFL-----------GILKSQPLI*YVSSYL*ELWVNQHN*VYILDYQMQWKDPLLYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LV---QQPHFCFNYWIISK*YEK----SNC-----LFYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLEARTVIKMLFLMRMKEVLEWHF----LYLFYVY*VYL*VILLKIYLLDLVP---IIEVQHYL*VLINMF*VILNFRFKI*TFTFNCNFIRSFKFIFII*IWIKIIL*FKTNFFIYIFIHF**KMIL**IYNEFISQNALISSYNYFYKTIDRGLIE 1767
            FLQMFVG EGVG+SSYLLINF FTRIQANK+AIKAML+NR+GDF LLLAIFT++  FN+L+YDI+F       +  LF+           G++    +  ++ +      +  H     L   M+   P+  L        +    FL  +V  S  F HS   LS   V       F     +     +K    S C     + +   +  Y+  ++ +             FFKALLFLGAG+VIHALSDEQDMRKMGG++ +LP SY+I LIGS AL+GFPFL GF+SKDVILEIS  TYTI GQF++ LG LA F TAFYS RLLYLVFL      K + L   +      F    L  F ++  YL   L   +          ++  +YL   I      L+ ++K+         I    +I+ I I    ++   +N F +I+  F  K      YN+F  +N L + YNY YKTIDRG+IE
Sbjct:  132 FLQMFVGWEGVGISSYLLINFWFTRIQANKSAIKAMLVNRIGDFFLLLAIFTLFITFNTLDYDIIF------SVTPLFINYNIGLFNYHIGLIDIICIFIFLGAMGKSAQIGLHT---WLPDAMEGPTPVSAL--IHAATMVTAGVFL--IVRCSYLFEHSPIALSIVTVIGSMTAFFAATTGLFQNDMKKVIAYSTCSQLGYMIFSCGLSSYEVSIFHLSN---------HAFFKALLFLGAGAVIHALSDEQDMRKMGGLKNLLPFSYAISLIGSLALVGFPFLTGFYSKDVILEISASTYTIYGQFAFFLGILATFCTAFYSTRLLYLVFLSYPNGNKNIILNAHEGSFRLTFPLGILCFFSIFIGYLTKDLFIGFGTSFWGSSIFVKPSNYLMTDIEF----LDIQYKLLPLVITLLGIFFSYYIYSIGITKYFLIKKCSNNFFFIYNFFNKKWYFDRFYNQFFLENILSNGYNYTYKTIDRGVIE 595          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: A0A520CBP3_9SPHI (NADH-quinone oxidoreductase subunit L (Fragment) n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A520CBP3_9SPHI)

HSP 1 Score: 227 bits (578), Expect = 5.660e-63
Identity = 161/343 (46.94%), Postives = 203/343 (59.18%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVFL*L-LYQKIHVLFLGILKSQPLI*YVSSYL*ELWVNQHN*VYI-LDYQMQWKDPLLYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LV---QQPHFCFNYWIISK*YEK----SNC-----LFYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLE 1323
            LF F  L  V   N   FLQMFVG EGVGVSSYLLINF FTRIQANK+AIKAML+NR+GDF LLLAIFTI+  FNSLNYD++F  +  +   ++ F G       I  +  +L  +  +    ++  L   M+   P+  L        +    FL  V+  S  F HS   LS   V       F     +     ++    S C     + +   +  Y+  ++ +             FFKALLFLGAG+VIHA+SDEQDMRKMGG++ +LP SY+I LIGS AL+GFPFLAGF+SKD+ILE+S  +YT  GQF+YILG LAAF TAFYS RLLYLVFL 
Sbjct:  137 LFTFFMLILVTANN---FLQMFVGWEGVGVSSYLLINFWFTRIQANKSAIKAMLVNRIGDFFLLLAIFTIFITFNSLNYDVIFSIVPFFISYNLGFFGYQVGLIDIICIFIFLGAMGKSAQIGLHTWLPDAMEGPTPVSAL--IHAATMVTAGVFL--VIRCSYLFEHSPLALSFITVVGSMTAFFAATTGLFQNDMKRVIAYSTCSQLGYMVFACGLSSYEVGIFHLSN---------HAFFKALLFLGAGAVIHAVSDEQDMRKMGGLQNLLPFSYAISLIGSLALVGFPFLAGFYSKDIILEVSASSYTNFGQFAYILGILAAFCTAFYSTRLLYLVFLS 463          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: Q9MGB1_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Synura synuroidea TaxID=47573 RepID=Q9MGB1_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.160e-57
Identity = 153/353 (43.34%), Postives = 204/353 (57.79%), Query Frame = 1
Query:  313 SSFTKIHVLFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVFL*LLYQKIHVLFLGILKSQPL-----I*YVSSYL*ELWVNQHN*VYILDYQMQWKDPLLYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LVQ---QPHFCFNYWIISK*YEK----SNC-----LFYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFL 1320
            + F     LF F  L  V   N   FLQ+FVG EGVG+SSYLLINF FTRIQANK++IKAM++NR+GDF  L+AIF++Y + NSL++D++F  +   K + + +GI K   L       ++ +      +  H+    L   M+   P+  L        +    FL  ++  S  F +S  IL+  ++       F     ++    ++    S C     +F+   +  YD           F       FFKALLFLGAGSVIHAL++EQDMRKMGG+R ILP SYSIMLIGS +L+GFPFL+GF+SKDVILEI+Y  Y   G F+Y LG LAAF TAFYS R+L LVFL
Sbjct:  110 NRFMSYLSLFTFFMLVLVTSNN---FLQLFVGWEGVGLSSYLLINFWFTRIQANKSSIKAMVLNRIGDFFFLIAIFSLYLITNSLDFDVIFSLVTLIKEYYIQIGIAKFCVLDLICLCLFLGATGKSAQLGLHS---WLPDAMEGPTPVSAL--IHAATMVTAGVFL--IIRCSFLFEYSPLILNLIIIIGSITALFAATTGLLQNDIKRVIAYSTCSQLGYMFFACGLSSYD---------VGFFHLYNHAFFKALLFLGAGSVIHALANEQDMRKMGGLRIILPFSYSIMLIGSLSLIGFPFLSGFYSKDVILEIAYAKYNTFGHFAYYLGVLAAFCTAFYSTRVLILVFL 443          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: A0A7S6ZPE4_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPE4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.500e-55
Identity = 149/352 (42.33%), Postives = 199/352 (56.53%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVF-L*LLYQKIHVLFLGI----LKSQPLI*YVSSYL*ELWVNQHN*VYILDYQMQWKDPL---------------LYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LVQQPHFCFNYWIISK*YEKSNCL---FYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLE 1323
            LF F  L  V   N   FLQMFVG EGVG+ SYLLINF F R+QANKAAIKAML+NRVGDF L L IF I+  F++++Y  VF +  L     + FLG+    L+   L+ +V +      V  H     L   M+   P+               L      LL++  +  FL  ++     F  +    ++ LVQ          + +    S C    + + +  + ++ +    L +         FFKALLFLGAGSVIHA+ DEQDMRKMGG+RR+LP +Y++ML+GS +LMG PFL GF+SKD+ILE++YG+YT    F+Y LGTLAAF TAFYS RL+YL FL 
Sbjct:  119 LFTFFMLLLVTADN---FLQMFVGWEGVGLCSYLLINFWFARLQANKAAIKAMLVNRVGDFGLALGIFAIFLSFDAVDYASVFAMAPLLSGSQICFLGMDFDALECISLLLFVGAVGKSAQVGLHT---WLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYAPKACFLICILGAMTAFFAA----TTGLVQND--------LKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANH-------AFFKALLFLGAGSVIHAMGDEQDMRKMGGLRRLLPFTYAMMLVGSLSLMGMPFLTGFYSKDLILEVAYGSYTTGAHFAYALGTLAAFCTAFYSFRLIYLSFLS 445          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: D2Z253_HETAK (NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Heterosigma akashiwo TaxID=2829 RepID=D2Z253_HETAK)

HSP 1 Score: 208 bits (529), Expect = 3.140e-55
Identity = 150/350 (42.86%), Postives = 198/350 (56.57%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVF----------L*LLYQKIHVLFL-GILKSQPLI*YVSSYL*ELWVNQHN*VYILDYQMQWKDPLLYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LVQQPHFCF---NYWIISK*YEK----SNCL---FYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLE 1323
            LF F  L  V   N   F+QMFVG EGVG+ SYLLINF FTRIQANKAAIKAML+NR+GDF L L IFT+Y+VFNS+NY  VF          +     +IH L L G+L     +   +      W+            M+   P+  L        +    FL  +   S  F ++   L    V     CF   +  ++    ++    S C    + + +  + ++ +    L +         FFKALLFLGAGSVIHA+SDEQDMRKMGG++++LP +Y +MLIGS +LMG PFL GF+SKDVILE++Y  Y++ G F+Y LG++ AF TAFYSIRLLYL FL 
Sbjct:  119 LFTFFMLILVTADN---FIQMFVGWEGVGLCSYLLINFWFTRIQANKAAIKAMLVNRIGDFGLALGIFTVYYVFNSVNYVTVFSLVPSFVDSTIVFFNTEIHCLTLIGVLLFVGAVGKSAQLGLHTWLPD---------AMEGPTPVSAL--IHAATMVTAGVFL--LGRCSPIFEYAPNALVVVTVVGAMTCFFAASVGLVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVGVFHLANH-------AFFKALLFLGAGSVIHAVSDEQDMRKMGGLKKLLPFTYGMMLIGSLSLMGMPFLTGFYSKDVILEVAYAKYSLPGHFAYWLGSMGAFFTAFYSIRLLYLTFLS 445          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: A0A7T4WR42_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Odontella regia TaxID=1335017 RepID=A0A7T4WR42_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.690e-54
Identity = 149/348 (42.82%), Postives = 199/348 (57.18%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVF----------L*LLYQKIHVLFL-GILKSQPLI*YVSSYL*ELWVNQH----N*VYILDYQMQWKDPLLYL--H*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LVQQPHFCFNYWIISK*YEKSNCL---FYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFL 1320
            LF F  L  V   N   ++Q+FVG EGVG+ SYLLINF FTRIQANKAAIKAM++NR+GDF L L IF I+  + S+++  VF          +  L   IH+L L GIL     +   +      W+         V  L +        ++L      L +++     L  ++  S  F  +    +  LVQ          + +    S C    + + +  + ++ +    L +         FFKALLFLGAGSVIHA+SDEQDMRKMGG++ ++PL+YS+M+IGS ALMGFPFLAGF+SKDVILE++YG YT  GQFSY LGTL AF TAFYSIRL+YL F+
Sbjct:  119 LFTFFMLILVTADN---YVQLFVGWEGVGLCSYLLINFWFTRIQANKAAIKAMIVNRIGDFGLTLGIFVIFIKYQSVDFATVFSITPFFIDETISFLNFDIHLLSLVGILLFVGAMGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGIFLIGRSSPLYEYIPNVLVLITILGASTAFFAA----TVGLVQND--------LKRVIAYSTCSQLGYMIFACGLSNYSVGIFHLANH-------AFFKALLFLGAGSVIHAVSDEQDMRKMGGLKLLVPLTYSMMMIGSLALMGFPFLAGFYSKDVILEVAYGKYTSAGQFSYFLGTLGAFFTAFYSIRLIYLTFI 444          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: A0A3G1PWE2_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Melosira undulata TaxID=2133757 RepID=A0A3G1PWE2_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.510e-54
Identity = 188/519 (36.22%), Postives = 255/519 (49.13%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVFL*LLYQKIHVLFLGILKSQPLI*YVSSYL*ELWVNQHN*VYILDY-QMQWKDPLLYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*--LVQQPHFCFNY----WIISK*YEKSNCLFY---------L*SIRVYDFC------LWTIKL*SRFISF---I*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLEARTVIKMLFLMRMKEVLEWHFLYLFYVY*VYL*VILLKIYLLDLVPIIEVQHY---L*VL-----------INMF*VILNFRFKI*TFTFNCNFIRSFKFIFII*IWIKIIL*FKTNFF---IYIFIHF**KMIL**IYNEFISQNALISSYNYFYKTIDRGLIE 1767
            LF F  +  V   N   F+QMFVG EGVG+ SYLLINF FTRIQANKAAIKAM+INR+GDF L+L I TI+  F +++Y  VF                   PL    S Y   + +N    + IL +     K   L LH      WL     +     +S   +H+  ++++   L+ +    F Y     +I   +  +   F          +  +  Y  C      ++   L +  I     +   FFKALLFL AG++IHA+S+EQDMRKMGG++  +P +YSIM+IGS +L GFPFL GF+SKD+ILE +YG Y+    FSY+LGTL AF TAFYS RLLYLVFL      K+ FL     V E  +   F +  + +  I    +L D++  +    +   L VL           IN+F  +L     I     N      +K           +   K NFF   +Y F++   K     IYNE I+Q  L  SY   YK IDRG+IE
Sbjct:  119 LFTFFMIILVTADN---FVQMFVGWEGVGLCSYLLINFWFTRIQANKAAIKAMIINRIGDFGLMLGILTIFIYFKAVDYSTVF----------------ALVPLFYNTSMYFFNIQINVLTLIGILLFIGAIGKSAQLGLH-----TWLPDA--MEGPTPVS-ALIHAATMVTAGVFLLARSSIIFEYAPITLVIITFFGAATSFFAATTGLLQNDIKRVIAYSTCSQLGYMVFACGLSNYSIGIFHLVNHAFFKALLFLSAGAIIHAMSNEQDMRKMGGLKHKIPFAYSIMVIGSLSLTGFPFLTGFYSKDIILESAYGKYSNISHFSYLLGTLGAFLTAFYSARLLYLVFLTKPNSYKIFFL----NVKESSYFINFSLILLAIPSIFAGFFLKDILIGVGTDFWGNSLFVLPENMNLIDSEFINIFYKLLPIFLSIIAIFINLVLYTYYK---------NKLYVLKINFFGNSLYNFLNK--KWYFDKIYNEIIAQTLLKFSYRISYKIIDRGIIE 595          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: T1R7I8_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Monodopsidaceae TaxID=425072 RepID=T1R7I8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.550e-54
Identity = 146/344 (42.44%), Postives = 196/344 (56.98%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVF-L*LLYQKIHVLFLGI----LKSQPLI*YVSSYL*ELWVNQHN*VYILDYQMQWKDPLLYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LV---QQPHFCFNYWIISK*YEK----SNCL---FYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLE 1323
            LF F  L  V   N   F+QMFVG EGVG+ SYLLINF FTRIQANKAAIKAM +NR+GDF L L IF I+  F +++Y  +F L   Y    + FL I    L    ++ ++ +      +  H     L   M+   P+  L        +    FL  +   S  F ++   LS   +       F  +  ++    +K    S C    + + +  + ++ +    L +         FFKALLFLGAG VIHA+ DEQDMRKMGG+ +I+P +Y +MLIGSF+LMGFPFL GF+SKDVILE++YG Y+  G F+Y+LG+LAAF TAFYS+RLLYL FL 
Sbjct:  119 LFTFFMLILVTADN---FIQMFVGWEGVGLCSYLLINFWFTRIQANKAAIKAMFMNRIGDFGLALGIFCIFVTFGAVDYSTIFALAPYYINDTINFLNIDFSLLDLVGILLFIGAVGKSAQLGLHT---WLPDAMEGPTPVSAL--IHAATMVTAGVFL--IARCSPLFEYAPGALSIVTIVGAMTAFFAASTGLLQNDMKKVIAYSTCSQLGYMIFACGLSNYHVGVFHLANH-------AFFKALLFLGAGCVIHAVGDEQDMRKMGGLSKIMPFTYGMMLIGSFSLMGFPFLTGFYSKDVILEVAYGKYSTSGHFAYVLGSLAAFLTAFYSVRLLYLTFLS 445          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: A0A893DCH1_9EUKA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Imasa heleensis TaxID=2772037 RepID=A0A893DCH1_9EUKA)

HSP 1 Score: 204 bits (519), Expect = 7.720e-54
Identity = 144/352 (40.91%), Postives = 198/352 (56.25%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVFL*--LLYQKIHVLF---LGILKSQPLI*YVSSYL*ELWVNQHN*VYILDYQMQWKDPL---------------LYLH*FMLLQWLQQEYFL*VVVHISLNFLHSH*ILSS*LVQQPHFCFNYWIISK*YEKSNC-----LFYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVF 1317
            LF F  L  V   N   F+Q+FVG EGVGVSSYLLINF FTRIQANK+A+KAM++NRVGDFAL L I  IY++F SL++  VF    L YQK  + F     ++    ++ ++ +      +  H     L   M+   P+               L L    LL++     F+  V+     FL +    ++ +VQ          + +    S C     + +   I  Y   ++ +             FFKALLFL AGSVIHALSDEQDMRKMGG+ ++LP +Y+++LIGS +LMG PFL GF+SKDVILE++Y +Y I G F++ LGT++AF T+FYS RL+YL F
Sbjct:  119 LFTFFMLVLVTSNN---FVQLFVGWEGVGVSSYLLINFWFTRIQANKSAMKAMIVNRVGDFALSLGIIGIYYIFKSLDFSTVFALSYLFYQKSFLFFNLEFDVITIIGILLFIGAVGKSAQIGLHT---WLPDAMEGPTPVSALIHAATMVTAGVFLLLRSSPLLEYSSMTLFIITVIGSLTAFLAA----TTGVVQND--------LKRVIAYSTCSQLGYMVFACGISCYSVSMFHLMN---------HAFFKALLFLSAGSVIHALSDEQDMRKMGGLAKVLPFTYTMILIGSLSLMGVPFLTGFYSKDVILELAYSSYHIHGNFAHWLGTISAFFTSFYSFRLIYLTF 443          
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Match: D2Z207_9STRA (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z207_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.880e-53
Identity = 149/352 (42.33%), Postives = 199/352 (56.53%), Query Frame = 1
Query:  337 LFIFIYLFHVNPCNC**FLQMFVG*EGVGVSSYLLINF*FTRIQANKAAIKAMLINRVGDFALLLAIFTIYFVFNSLNYDIVF-L*LLYQKIHVLFLGI----LKSQPLI*YVSSYL*ELWVNQHN*VYILDYQMQWKDPLLYL---------H*FML------LQWLQQEYFL*VVVHISLNFLHSH*ILSS*LVQQPHFCFNYWIISK*YEKSNCL---FYL*SIRVYDFCLWTIKL*SRFISFI*SCFFKALLFLGAGSVIHALSDEQDMRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTICGQFSYILGTLAAFATAFYSIRLLYLVFLE 1323
            LF F  +  V   N   F+QMFVG EGVG+ SYLLINF FTRIQANKAAIKAM++NR+GD  L L IFTIY++F S+NY  VF L   +    ++FL I    L    L+ ++ +      +  H     L   M+   P+  L           F+L       ++  Q   +  VV     F  +    S  L+Q          + +    S C    + + +  + ++ +    L +         FFKALLFLGAGSVIH +SDEQDMRKMGG++++LP +YS+MLIGS +LMG PFL GF+SKDVILE++Y  ++I G F+Y LGT+ AF TAFYSIRLLYL FL 
Sbjct:  119 LFTFFMVILVTADN---FVQMFVGWEGVGLCSYLLINFWFTRIQANKAAIKAMVVNRIGDLGLALGIFTIYYLFQSVNYITVFSLVPSFCDKTIVFLNIEIHCLTLIGLLLFIGAMGKSAQLGLHT---WLPDAMEGPTPVSALIHAATMVTAGVFLLGRCSPIFEYAPQALIVVTVVGAMTCFFSA----SVGLLQND--------LKRVIAYSTCSQLGYMVFACGLSNYSVGIFHLANH-------AFFKALLFLGAGSVIHGVSDEQDMRKMGGLKKLLPFTYSMMLIGSLSLMGLPFLTGFYSKDVILEVAYSKFSIPGHFAYWLGTIGAFLTAFYSIRLLYLTFLS 445          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1582.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q9G924_OCHDN5.650e-6439.39NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Och... [more]
A0A520CBP3_9SPHI5.660e-6346.94NADH-quinone oxidoreductase subunit L (Fragment) n... [more]
Q9MGB1_9STRA2.160e-5743.34NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Syn... [more]
A0A7S6ZPE4_9STRA1.500e-5542.33NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Sch... [more]
D2Z253_HETAK3.140e-5542.86NADH-ubiquinone oxidoreductase chain 5 n=7 Tax=Het... [more]
A0A7T4WR42_9STRA1.690e-5442.82NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Odo... [more]
A0A3G1PWE2_9STRA4.510e-5436.22NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Mel... [more]
T1R7I8_9STRA5.550e-5442.44NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Mon... [more]
A0A893DCH1_9EUKA7.720e-5440.91NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Ima... [more]
D2Z207_9STRA2.880e-5342.33NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Cha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1582contigP-littoralis_Contig1582:5735..7545 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6669.EFX60005
PFAMsProton_antipo_M,Proton_antipo_N
Model size1811
Max annot lvl33208|Metazoa
KEGG rclassRC00061
KEGG koko:K03883
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko05012,map00190,map01100,map04714,map04723,map05012
KEGG ModuleM00142
Hectar predicted targeting categorysignal anchor
Exons1
Evalue2.37e-26
EggNOG OGsCOG1007@1|root,KOG4668@2759|Eukaryota,38F5W@33154|Opisthokonta,3BEVW@33208|Metazoa,3CTS4@33213|Bilateria,422JH@6656|Arthropoda
EC1.6.5.3
DescriptionProton-conducting membrane transporter
Cds size327
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789757.435985-UTR-P-littoralis_Contig1582:5734..68171680789757.435985-UTR-P-littoralis_Contig1582:5734..6817Pylaiella littoralis U1_48UTRP-littoralis_Contig1582 5735..6817 +
1680789757.4612448-UTR-P-littoralis_Contig1582:7144..75451680789757.4612448-UTR-P-littoralis_Contig1582:7144..7545Pylaiella littoralis U1_48UTRP-littoralis_Contig1582 7145..7545 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789757.4510136-CDS-P-littoralis_Contig1582:6817..71441680789757.4510136-CDS-P-littoralis_Contig1582:6817..7144Pylaiella littoralis U1_48CDSP-littoralis_Contig1582 6818..7144 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1582.5.1prot_P-littoralis_Contig1582.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1582 6818..7144 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1582.5.1

>prot_P-littoralis_Contig1582.5.1 ID=prot_P-littoralis_Contig1582.5.1|Name=mRNA_P-littoralis_Contig1582.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=109bp
MRKMGGVRRILPLSYSIMLIGSFALMGFPFLAGFFSKDVILEISYGTYTI
CGQFSYILGTLAAFATAFYSIRLLYLVFLEARTVIKMLFLMRMKEVLEWH
FLYLFYVY*
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mRNA from alignment at P-littoralis_Contig1582:5735..7545+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1582.5.1 ID=mRNA_P-littoralis_Contig1582.5.1|Name=mRNA_P-littoralis_Contig1582.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1811bp|location=Sequence derived from alignment at P-littoralis_Contig1582:5735..7545+ (Pylaiella littoralis U1_48)
GTTATTACTAATATTAGTTTTTCCTTTCTTAGGTTTTTAAGTGGAAGTTT ATTTGGGCGTTTTATTGGGTTAGGTATTTCATATATTACCACAATGTTCA CCTTTTTCATTTTTAATCTCTTTTGGATTATTAGTGGAAATAGCAAGTAC TGGAAATGTTTACTTTGTAAAAGTTTTAGACTGAATTCATATCGATTCTT TAGTTTTAGATTGAAATTTTTGTTTTGATAGTTTAACAGCAGTTATGTTA GTAATTGTTACTTTTATCTCAACTTTAGTTCATTTATATTCTACTGAATA TATGGAAAATGATCCTCATTTACCAAGATTCATGTCTTATTTATCTTTAT TTACTTGTTTCATGTTAATCCTTGTAACTGCTAATAATTTTTACAAATGT TCGTAGGTTGAGAAGGTGTTGGTGTTTCTTCTTATTTACTAATTAATTTC TGATTTACTAGAATACAAGCTAATAAAGCAGCTATAAAAGCAATGTTAAT TAATAGAGTAGGAGATTTTGCATTATTATTAGCAATTTTTACTATCTATT TTGTTTTTAATAGTCTTAATTATGATATTGTTTTTCTTTAGCTTCTTTAT CAGAAAATTCACGTATTATTTTTGGGAATTTTGAAATCCCAACCATTGAT TTAATATGTATCTTCTTATTTATAGGAGCTATGGGTAAATCAGCACAATT AGGTTTACATACTTGATTACCAGATGCAATGGAAGGACCCACTCCTGTAT CTGCATTAATTCATGCTGCTACAATGGTTACAGCAGGAGTATTTCTTGTA AGTCGTTGTTCATATATCTTTGAATTTTCTCCATTCACATTAAATATTAT CATCTTAATTGGTTCAGCAACCGCATTTTTGCTTCAACTACTGGATTATT TCAAAATGATATGAAAAAAGTAATTGCTTATTCTACTTGTAGTCAATTAG GGTATATGATTTTTGCTTGTGGACTATCAAGTTATGAAGTAGGTTTATTT CATTTATCTAATCATGCTTTTTTAAAGCATTATTATTCTTAGGTGCTGGA TCAGTAATTCATGCATTATCTGATGAGCAAGATATGCGTAAAATGGGAGG TGTTAGAAGAATACTTCCATTGTCTTATTCAATTATGTTAATTGGTTCTT TTGCTTTAATGGGATTCCCATTTTTAGCTGGATTCTTTTCTAAAGATGTA ATCTTAGAAATTAGTTATGGAACTTATACTATTTGTGGACAATTTTCTTA TATATTAGGAACATTAGCAGCATTTGCAACAGCTTTTTATTCAATAAGAT TATTATATTTAGTATTCTTAGAAGCCCGAACAGTAATAAAAATGTTATTT TTAATGCGCATGAAGGAAGTATTAGAATGGCATTTCCTTTATTTATTTTA TGTATATTAAGTATATTTGTAGGTTATCTTACTAAAGATTTATTTATTGG ATTTGGTACCGATTATTGAGGTCCAGCATTATTTGTAAGTCCTTATAAAT ATGTTTTAAGTGATATTGAATTTTAGATTTAAGATTTAAACTTTTACCTT TAATTGTAACTTTATTAGGAGCTTCAAGTTCATTTTTATTATATAAATAT GGATTAAAATCATATTATAATTTAAAACAAACTTCTTTATTTATATTTTT ATACATTTTTAATAAAAAATGATACTTTGATAAATTTATAATGAATTTAT TTCTCAAAATGCATTAATTTCAAGTTATAATTATTTTTATAAAACAATTG ATAGAGGATTAATCGAAAAGTAGGACCATTTGGAATTGTTAATGCAGTAA AAAAACACATC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1582:5735..7545+

>mRNA_P-littoralis_Contig1582.5.1 ID=mRNA_P-littoralis_Contig1582.5.1|Name=mRNA_P-littoralis_Contig1582.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=327bp|location=Sequence derived from alignment at P-littoralis_Contig1582:5735..7545+ (Pylaiella littoralis U1_48)
ATGCGTAAAATGGGAGGTGTTAGAAGAATACTTCCATTGTCTTATTCAAT
TATGTTAATTGGTTCTTTTGCTTTAATGGGATTCCCATTTTTAGCTGGAT
TCTTTTCTAAAGATGTAATCTTAGAAATTAGTTATGGAACTTATACTATT
TGTGGACAATTTTCTTATATATTAGGAACATTAGCAGCATTTGCAACAGC
TTTTTATTCAATAAGATTATTATATTTAGTATTCTTAGAAGCCCGAACAG
TAATAAAAATGTTATTTTTAATGCGCATGAAGGAAGTATTAGAATGGCAT
TTCCTTTATTTATTTTATGTATATTAA
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