prot_P-littoralis_Contig1582.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1582.4.1
Unique Nameprot_P-littoralis_Contig1582.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: Q9MGA9_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Synura synuroidea TaxID=47573 RepID=Q9MGA9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.260e-39
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLV LGIFSFN+IG+EG+ILQS+SHGFVSGGMFLL+G+LY+RYHSR LYYYGGLV +MP+Y+ FFL FT ANIA PGTSSFVGEF
Sbjct:  306 MNLVVLGIFSFNIIGLEGSILQSLSHGFVSGGMFLLVGILYDRYHSRLLYYYGGLVHVMPLYSFFFLAFTLANIATPGTSSFVGEF 391          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: Q9G922_OCHDN (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ochromonas danica TaxID=2986 RepID=Q9G922_OCHDN)

HSP 1 Score: 141 bits (355), Expect = 5.030e-38
Identity = 66/86 (76.74%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLVTLGIF+FN IG+EG+I+QS+SHGFV+GGMF LIG+LY+RYHSRFLYYYGGL   MP+Y+IFFL+ T ANIA+PGTSSF GEF
Sbjct:  306 MNLVTLGIFAFNNIGLEGSIIQSLSHGFVAGGMFFLIGILYSRYHSRFLYYYGGLAHTMPVYSIFFLLLTIANIALPGTSSFTGEF 391          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A2A4ST44_9DELT (Proton_antipo_M domain-containing protein n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4ST44_9DELT)

HSP 1 Score: 128 bits (321), Expect = 1.250e-35
Identity = 60/86 (69.77%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLV +GIFSFN+IG+EGA+LQS+SHGFVS  +FLLIGVLY+R+H++ + YY GLV  MP+++I FLIFT ANI +PGTSSFVGEF
Sbjct:   75 MNLVIIGIFSFNIIGLEGAVLQSLSHGFVSSALFLLIGVLYDRHHTKMIKYYSGLVHTMPVFSIIFLIFTMANIGLPGTSSFVGEF 160          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A1J0RDN4_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Asterionella formosa TaxID=210441 RepID=A0A1J0RDN4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.150e-34
Identity = 61/86 (70.93%), Postives = 75/86 (87.21%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MN+V LGIFSFNVIGIEGAILQS+SHGFV+ G+F++IGV+Y+RYH+R + YYGGL  +MPIY + FL FT ANI +PGTSSF+GEF
Sbjct:  309 MNIVVLGIFSFNVIGIEGAILQSLSHGFVASGLFMIIGVVYDRYHTRMVRYYGGLNHVMPIYVVIFLFFTMANIGLPGTSSFIGEF 394          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A7U0KSG6_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7U0KSG6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.710e-34
Identity = 61/86 (70.93%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLV +GIFSFN+IG+EGAI+QSISHGFVS  +FL+IG++Y+RYH+R + Y+GG+ Q MPI+ IFFLIF+ ANIA+PGTSSFVGEF
Sbjct:  305 MNLVVMGIFSFNLIGLEGAIIQSISHGFVSSALFLIIGIVYDRYHTRTVRYFGGIAQTMPIFVIFFLIFSMANIALPGTSSFVGEF 390          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A2U9GIS8_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Psammoneis japonica TaxID=517775 RepID=A0A2U9GIS8_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.240e-33
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLV LGIFSFNVIGIEGA+LQS+SHGFV+  +FL+IGV+Y+R+H+R + YYGGLV +MPIY   FL FT ANI +PGTSSFVGEF
Sbjct:  316 MNLVMLGIFSFNVIGIEGALLQSLSHGFVASALFLIIGVVYDRHHTRMVKYYGGLVHVMPIYIFIFLFFTMANIGLPGTSSFVGEF 401          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A7T6UZN4_LITUN (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Lithodesmium undulatum TaxID=59812 RepID=A0A7T6UZN4_LITUN)

HSP 1 Score: 127 bits (320), Expect = 6.330e-33
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLV +G+FSFN+IGIEGAILQS+SHGFV+  +FL+IG++Y R+H+R + YYGGLV +MPIY I FL FT ANI +PGTSSFVGEF
Sbjct:  317 MNLVMVGLFSFNIIGIEGAILQSLSHGFVASALFLIIGIVYERHHTRMVKYYGGLVHIMPIYIIIFLFFTMANIGLPGTSSFVGEF 402          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A7T8JJN0_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Coscinodiscus wailesii TaxID=671091 RepID=A0A7T8JJN0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 8.440e-33
Identity = 58/86 (67.44%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MNLV +G+FSFN IG+EGAILQSISHGFV+  +F++IG++Y RYH+R + YYGGLV +MP+Y+I FL+FT ANI +PGT SFVGEF
Sbjct:  313 MNLVIIGLFSFNTIGLEGAILQSISHGFVASALFIIIGIVYERYHTRMVKYYGGLVHIMPLYSIIFLLFTMANIGLPGTGSFVGEF 398          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A140F2N5_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2N5_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.150e-32
Identity = 59/86 (68.60%), Postives = 76/86 (88.37%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF 86
            MN+V +GI+SFN+IG+EG+I+QSISHGFVS  +FL+IGV+Y+R+H+R + YY GLV +MP+YAI FL FT ANIA+PGTSSFVGEF
Sbjct:  343 MNIVMIGIYSFNIIGLEGSIIQSISHGFVSSALFLIIGVVYDRFHTRLVKYYSGLVHIMPLYAIIFLFFTLANIAMPGTSSFVGEF 428          
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Match: A0A0K2RWI1_9STRA (NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWI1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.210e-32
Identity = 59/85 (69.41%), Postives = 76/85 (89.41%), Query Frame = 0
Query:    1 MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLYYYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGE 85
            MNLV +G+FSFN+IG EGA+LQS+SHGFV+  +FL+IGV+Y+R+H+R + YYGGLV +MPI+AI FL+FT ANIA+PGTSSFVGE
Sbjct:  313 MNLVVIGLFSFNLIGFEGAMLQSLSHGFVASALFLVIGVIYDRHHTRMVKYYGGLVHVMPIFAIIFLVFTMANIALPGTSSFVGE 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1582.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q9MGA9_9STRA1.260e-3980.23NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Syn... [more]
Q9G922_OCHDN5.030e-3876.74NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Och... [more]
A0A2A4ST44_9DELT1.250e-3569.77Proton_antipo_M domain-containing protein n=1 Tax=... [more]
A0A1J0RDN4_9STRA4.150e-3470.93NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Ast... [more]
A0A7U0KSG6_9STRA5.710e-3470.93NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Aur... [more]
A0A2U9GIS8_9STRA3.240e-3372.09NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Psa... [more]
A0A7T6UZN4_LITUN6.330e-3369.77NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Lit... [more]
A0A7T8JJN0_9STRA8.440e-3367.44NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Cos... [more]
A0A140F2N5_9STRA1.150e-3268.60NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Tra... [more]
A0A0K2RWI1_9STRA1.210e-3269.41NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003918NADH:ubiquinone oxidoreductasePRINTSPR01437NUOXDRDTASE4coord: 67..86
score: 27.74
coord: 15..34
score: 42.85
IPR003918NADH:ubiquinone oxidoreductasePANTHERPTHR43507NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4coord: 1..86
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 2..86
e-value: 7.0E-17
score: 61.6
NoneNo IPR availablePANTHERPTHR43507:SF1NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4coord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1582contigP-littoralis_Contig1582:3839..4099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1582.4.1mRNA_P-littoralis_Contig1582.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1582 3123..4356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1582.4.1 ID=prot_P-littoralis_Contig1582.4.1|Name=mRNA_P-littoralis_Contig1582.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MNLVTLGIFSFNVIGIEGAILQSISHGFVSGGMFLLIGVLYNRYHSRFLY
YYGGLVQMMPIYAIFFLIFTFANIAIPGTSSFVGEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003918NADH_UbQ_OxRdtase
IPR001750ND/Mrp_mem