mRNA_P-littoralis_Contig1582.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A519UST1_9SPHI (NADH-quinone oxidoreductase subunit D n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A519UST1_9SPHI) HSP 1 Score: 374 bits (961), Expect = 8.570e-125 Identity = 183/205 (89.27%), Postives = 197/205 (96.10%), Query Frame = 1
Query: 4 IKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSAQ 618
+KNFTINFGPQHPAAHGVLRLILELDGEVV RADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTY LA+EK+G+I++P RAKVIRVIFAEITR+LNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMHAAYIRPGG+++DIP GFLDDLY+F QFNLR+DEIEEMLTGNRI KERLVDIG+VSA+
Sbjct: 12 LKNFTINFGPQHPAAHGVLRLILELDGEVVKRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYCLAIEKLGSIKIPERAKVIRVIFAEITRLLNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGIASDIPLGFLDDLYLFTSQFNLRLDEIEEMLTGNRIWKERLVDIGIVSAK 216
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: Q9G921_OCHDN (NADH dehydrogenase subunit 7 n=1 Tax=Ochromonas danica TaxID=2986 RepID=Q9G921_OCHDN) HSP 1 Score: 368 bits (944), Expect = 3.200e-122 Identity = 182/206 (88.35%), Postives = 194/206 (94.17%), Query Frame = 1
Query: 4 IKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSAQK 621
+KNFTINFGPQHPAAHGVLRLILELDGEVV +ADPHIGLLHRGTEKLIE+KTYLQALPYFDRLDYVSMMAQEHTYSLA+EKIGNI +P RAK+IR IFAEITR+LNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMHAAYIRPGGVS DIP G LDDLYIF++QFN R+DE+EEMLT +RI KERLVDIGVVSA K
Sbjct: 12 LKNFTINFGPQHPAAHGVLRLILELDGEVVEKADPHIGLLHRGTEKLIEFKTYLQALPYFDRLDYVSMMAQEHTYSLAIEKIGNIVIPERAKIIRTIFAEITRLLNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVSMDIPLGLLDDLYIFVNQFNYRLDEMEEMLTKSRIWKERLVDIGVVSAAK 217
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A140F2V2_9STRA (NADH dehydrogenase subunit 7 n=3 Tax=Eustigmataceae TaxID=425071 RepID=A0A140F2V2_9STRA) HSP 1 Score: 360 bits (923), Expect = 6.880e-119 Identity = 177/204 (86.76%), Postives = 192/204 (94.12%), Query Frame = 1
Query: 4 IKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSA 615
+KNFTINFGPQHPAAHGVLRL+LEL+GE+V RADPHIGLLHRGTEKLIEYKTYLQ+LPYFDRLDYVSMMAQEHT+SLAVEK+ NI+VP A+ IRV+F EITRILNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMHAAYIRPGGV+ D+P GFLDDLYIFI QFN+R+DEIEEMLT NRI K+RLVDIGVVSA
Sbjct: 12 LKNFTINFGPQHPAAHGVLRLVLELNGELVERADPHIGLLHRGTEKLIEYKTYLQSLPYFDRLDYVSMMAQEHTFSLAVEKLANIKVPEYAQYIRVLFLEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVALDLPLGFLDDLYIFIQQFNIRLDEIEEMLTANRIWKQRLVDIGVVSA 215
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A140F2Z4_9STRA (NADH dehydrogenase subunit 7 n=9 Tax=Monodopsidaceae TaxID=425072 RepID=A0A140F2Z4_9STRA) HSP 1 Score: 358 bits (920), Expect = 1.370e-118 Identity = 174/206 (84.47%), Postives = 192/206 (93.20%), Query Frame = 1
Query: 1 RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSAQ 618
+IKNFTINFGPQHPAAHGVLRL+LEL+GE+V RADPHIGLLHRGTEKLIEYKTY+QALPYFDRLDYVSMMAQEHTYSLAVEK+ N ++P RA+ IRV+F EITRILNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMHAAYIRPGGVS DIP G LDD+YIF++QF +R+DE+EEMLT NRI K+RLVDIG VSA+
Sbjct: 11 KIKNFTINFGPQHPAAHGVLRLVLELNGEIVERADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMAQEHTYSLAVEKLANTKIPVRAQYIRVLFLEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVSQDIPLGLLDDIYIFVEQFGIRLDEMEEMLTANRIWKQRLVDIGKVSAK 216
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A0K2RX84_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RX84_9STRA) HSP 1 Score: 356 bits (913), Expect = 1.560e-117 Identity = 173/206 (83.98%), Postives = 193/206 (93.69%), Query Frame = 1
Query: 1 RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSAQ 618
++KNFTINFGPQHPAAHGVLRL+LEL+GEVV RADPHIGLLHRGTEKLIEYKTY+QALPYFDRLDYVSMMAQE TYSLAVEK+ N +VP RA+ IRV+FAEITRILNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMHAAYIRPGGVS D+PAG LDD+YIF +QF++R+DE+EEMLT NRI K+RLVDI +VS++
Sbjct: 11 KVKNFTINFGPQHPAAHGVLRLVLELNGEVVERADPHIGLLHRGTEKLIEYKTYMQALPYFDRLDYVSMMAQEQTYSLAVEKLLNCEVPLRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVSLDLPAGLLDDIYIFAEQFSIRVDEMEEMLTANRIWKQRLVDIAIVSSE 216
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: Q9MGA8_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Synura synuroidea TaxID=47573 RepID=Q9MGA8_9STRA) HSP 1 Score: 352 bits (902), Expect = 7.180e-116 Identity = 165/204 (80.88%), Postives = 191/204 (93.63%), Query Frame = 1
Query: 4 IKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSA 615
+KNFTINFGPQHPAAHGVLRLILELDGE+++ +DPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLA+EK+ NI++P RA++IRV+F EITR+LNHL+AVGCHA+DVGAM+PF+ FEEREKLMEFYERVSGARMHAAY RPGGV++D+P G LDD++IFI QF +R+DE+EEMLT NRI KERLVDIG+VSA
Sbjct: 12 LKNFTINFGPQHPAAHGVLRLILELDGEIIVNSDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAIEKLMNIKIPRRAQIIRVLFCEITRLLNHLVAVGCHALDVGAMSPFMWGFEEREKLMEFYERVSGARMHAAYFRPGGVASDLPIGLLDDIFIFIKQFKIRLDEMEEMLTSNRIWKERLVDIGIVSA 215
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A649UBT6_AURAN (NADH dehydrogenase subunit 7 n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A649UBT6_AURAN) HSP 1 Score: 348 bits (894), Expect = 1.160e-114 Identity = 171/206 (83.01%), Postives = 190/206 (92.23%), Query Frame = 1
Query: 1 RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSAQ 618
+ KNFTINFGPQHPAAHGVLRL+L+LDGEVV RADPHIGLLHRGTEKLIEYKTY+QALPYFDRLDYVSMMAQE TYSLAVEK+ + +VP RA+ IRV+FAEITRILNHLLAVGCHAMDVGA TP L AFEEREKLMEFYERVSGAR+HAAYIRPGGVS D+P G LDD+YIF +QF+ R+DE+EE+LTGNRI K+RLVDIGVVSA+
Sbjct: 11 KAKNFTINFGPQHPAAHGVLRLVLDLDGEVVERADPHIGLLHRGTEKLIEYKTYMQALPYFDRLDYVSMMAQEQTYSLAVEKLLSCRVPLRAQYIRVLFAEITRILNHLLAVGCHAMDVGATTPMLWAFEEREKLMEFYERVSGARLHAAYIRPGGVSQDLPLGLLDDIYIFTEQFSTRVDEMEELLTGNRIWKQRLVDIGVVSAK 216
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A8E7MIM3_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Attheya longicornis TaxID=451786 RepID=A0A8E7MIM3_9STRA) HSP 1 Score: 348 bits (892), Expect = 2.330e-114 Identity = 169/204 (82.84%), Postives = 189/204 (92.65%), Query Frame = 1
Query: 1 RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVS 612
+IKNFTINFGPQHPAAHGVLRL+LEL+GEVV RADPHIGLLHRGTEKLIEYKTY+QALPYFDRLDYVSMMAQEHTY LA+E++ N ++P RA+ IRVIFAEITRILNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMH+AY RPGGV +D+P G L+D+YIFI+QF LR+ EIE+MLT NRI K+RLVD+GVVS
Sbjct: 11 KIKNFTINFGPQHPAAHGVLRLVLELNGEVVERADPHIGLLHRGTEKLIEYKTYVQALPYFDRLDYVSMMAQEHTYCLAIEQLFNCKIPQRAQYIRVIFAEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHSAYFRPGGVQSDLPKGLLNDIYIFIEQFTLRLTEIEDMLTENRIWKQRLVDVGVVS 214
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A7T0GF04_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Eucampia zodiacus TaxID=444606 RepID=A0A7T0GF04_9STRA) HSP 1 Score: 348 bits (892), Expect = 2.330e-114 Identity = 165/205 (80.49%), Postives = 189/205 (92.20%), Query Frame = 1
Query: 1 RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSA 615
+IKNFTINFGPQHPAAHGVLRL+LELDGE+V RADPHIGLLHRGTEKLIEYK Y+Q++PYFDRLDYVSMMAQEH+Y LA+EK+ N Q+P R++ IRV+FAE+TRILNHLLAVGCHAMDVGAMTPFL AFEEREKLMEFYERVSGARMHAAY RPGGV D+P G LDD+++F+DQFN+R+ EIE+MLT NRI K+RLVDIGVV+A
Sbjct: 11 KIKNFTINFGPQHPAAHGVLRLVLELDGEIVERADPHIGLLHRGTEKLIEYKNYVQSIPYFDRLDYVSMMAQEHSYCLAIEKLFNCQIPQRSQYIRVLFAELTRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYFRPGGVHVDLPKGLLDDIFLFVDQFNIRLTEIEDMLTENRIWKQRLVDIGVVTA 215
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Match: A0A140F2R7_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2R7_9STRA) HSP 1 Score: 347 bits (891), Expect = 3.300e-114 Identity = 168/207 (81.16%), Postives = 189/207 (91.30%), Query Frame = 1
Query: 1 RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMAQEHTYSLAVEKIGNIQVPYRAKVIRVIFAEITRILNHLLAVGCHAMDVGAMTPFL*AFEEREKLMEFYERVSGARMHAAYIRPGGVSADIPAGFLDDLYIFIDQFNLRIDEIEEMLTGNRI*KERLVDIGVVSAQK 621
+IKNFT+NFGPQHPAAHGVLR++LEL+GE++ RADPHIGLLHRGTEKLIE KTY+QALPYFDRLDYVSMMAQEHTYSLAVEK+ N +VP RA+ IRV+F EITRILNHLLAVGCHAMDVGAMTP L FEEREKLMEFYERVSGARMHAAY+RPGG+S DIP G LDD+YIFI+QF R+DE+EEMLTGNRI K+RLVDIG VS ++
Sbjct: 11 KIKNFTVNFGPQHPAAHGVLRMVLELNGEIIERADPHIGLLHRGTEKLIENKTYIQALPYFDRLDYVSMMAQEHTYSLAVEKLVNAKVPLRAQYIRVLFLEITRILNHLLAVGCHAMDVGAMTPMLWFFEEREKLMEFYERVSGARMHAAYVRPGGLSQDIPLGLLDDIYIFIEQFGTRLDEVEEMLTGNRIWKQRLVDIGKVSLKE 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1582.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1582.3.1 >prot_P-littoralis_Contig1582.3.1 ID=prot_P-littoralis_Contig1582.3.1|Name=mRNA_P-littoralis_Contig1582.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp RIKNFTINFGPQHPAAHGVLRLILELDGEVVIRADPHIGLLHRGTEKLIEback to top mRNA from alignment at P-littoralis_Contig1582:1458..2620+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1582.3.1 ID=mRNA_P-littoralis_Contig1582.3.1|Name=mRNA_P-littoralis_Contig1582.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1163bp|location=Sequence derived from alignment at P-littoralis_Contig1582:1458..2620+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1582:1458..2620+ >mRNA_P-littoralis_Contig1582.3.1 ID=mRNA_P-littoralis_Contig1582.3.1|Name=mRNA_P-littoralis_Contig1582.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=381bp|location=Sequence derived from alignment at P-littoralis_Contig1582:1458..2620+ (Pylaiella littoralis U1_48)back to top |