mRNA_P-littoralis_Contig1582.1.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: Q9G920_OCHDN (NADH dehydrogenase subunit 9 n=1 Tax=Ochromonas danica TaxID=2986 RepID=Q9G920_OCHDN) HSP 1 Score: 215 bits (547), Expect = 2.160e-68 Identity = 99/150 (66.00%), Postives = 123/150 (82.00%), Query Frame = 1
Query: 52 VFPIIRSFSPGNEDT-IIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKEL 498
+ P+ + F N++ I+SH NLL +LK LKLHINYQYKLL+CISG+DF + KYRF + YD+LSL NN+R+RVK+FVNEITP++S + IY N+N EREI DMYGIYF N+PDLRRILTDYGFEGYP+RKDFPLSG++ELRYD KK +
Sbjct: 12 IVPVYQCFIHNNDEVCFIISHENLLHALKILKLHINYQYKLLTCISGIDFFSLKYRFCIAYDLLSLVNNSRVRVKIFVNEITPIESCVEIYKNANWWEREIWDMYGIYFYNHPDLRRILTDYGFEGYPLRKDFPLSGFVELRYDSIKKRV 161
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: Q9MGA7_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Synura synuroidea TaxID=47573 RepID=Q9MGA7_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.950e-63 Identity = 95/165 (57.58%), Postives = 120/165 (72.73%), Query Frame = 1
Query: 43 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKELY*SL*SFLKNFEL 537
+ ++ P I NED II+ NL FSL CLK HINYQ+ LLS I+GVD + CKYRF V+YD+LSL+ N RLR+K+F+ E+ + S +IY+NSN ERE+ D++GIYF N+PDLRRILTDYGFEGYPMRKDFPL GY ELRYD+ KK++ +NF L
Sbjct: 5 LKKIIPFIFFQKINNEDLIILLPKNLRFSLLCLKKHINYQFSLLSYIAGVDLLGCKYRFCVVYDLLSLSFNIRLRIKLFITEVNTIPSVTDIYVNSNWWEREVWDLFGIYFENHPDLRRILTDYGFEGYPMRKDFPLYGYTELRYDESKKQIVVESVELSQNFRL 169
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A519UK29_9SPHI (NADH-quinone oxidoreductase subunit C n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A519UK29_9SPHI) HSP 1 Score: 181 bits (458), Expect = 2.400e-55 Identity = 79/123 (64.23%), Postives = 102/123 (82.93%), Query Frame = 1
Query: 130 LKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKEL 498
LK LK HINYQ+ LL+CISGVD + YRF V+YD+LS+ NN+R++VK+FVNE+T V S++ ++ N+N ERE+ DM+G+YF N+PDLRRILTDYGFEGYP+RKDFPLSGY+ELRY KK +
Sbjct: 5 LKVLKKHINYQFNLLTCISGVDLLGSSYRFSVVYDLLSIVNNSRIKVKIFVNEVTYVPSSVPVFHNANWWEREVWDMFGVYFKNHPDLRRILTDYGFEGYPLRKDFPLSGYLELRYHSVKKRV 127
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A2E8YWY0_9ACTN (NADH-quinone oxidoreductase subunit C n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A2E8YWY0_9ACTN) HSP 1 Score: 176 bits (446), Expect = 7.230e-53 Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 KYIYIKYENKNLIKMNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINC----KYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKEL 498
K I K + K N++ P + S NE +V ++L L+CL HI +QYK+LSCISGVDF+ K RFGV+YD+LS+ R+RVK+F+ E+ V S I+IYIN+N EREI DM+GI+F N+ DLRRILTDYGF GYP+RKDFPL+GYI++ YD +K +
Sbjct: 6 KRISFKQKEKKRFLSNKIIPFVWSQKINNEIIYVVHKKHILLVLQCLNQHIKFQYKVLSCISGVDFLGTSIGNKCRFGVVYDLLSIFYKKRIRVKLFLKELDTVSSTISIYINANWWEREIWDMFGIWFENHIDLRRILTDYGFXGYPLRKDFPLTGYIDVCYDIDRKRI 175
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A0K2RWJ9_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWJ9_9STRA) HSP 1 Score: 166 bits (419), Expect = 8.340e-49 Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 1
Query: 43 MNEVFPIIR---SFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKELY*SL*SFLKNF 531
+N P++ + G+E + VS +L+ +L LK +QYKLL+CISGVD+ RF V+Y++LSLT N+R+RVK V EI VDSA+ +Y ++ EREI D++G++F N+PDLRRILTDYGFEG+P+RKDFPLSGY+E+RYD+ KK + SF + F
Sbjct: 15 LNSQLPLLNLELKYQQGSELILTVSPKHLISTLFFLKNSTAHQYKLLTCISGVDYPGRTDRFEVVYELLSLTFNSRIRVKTHVGEINSVDSAVALYPAADWWEREIWDLFGVFFKNHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDERKKRVVCEPLSFAQEF 180
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A8F0K0R4_9PHAE (NADH dehydrogenase subunit 9 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K0R4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 1.920e-48 Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 40 KMNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKK 492
K+ ++ PI E IIVS LLF L L H N ++ LL+CISGVDF + + RF ++Y++LS+ N R+RVK + NE+ P+ SA+N++ +N EREI D+YG++F +PDLRRILTDYGFEG+P+RKDFPLSGY ELRYD+ ++
Sbjct: 12 KLTKLLPIQILKINSQESVIIVSKNYLLFVLFFLHHHANGEFNLLTCISGVDFPDREERFEIVYELLSIKYNTRIRVKTYTNEVNPIFSAVNLFPCANWWEREIWDLYGVFFYTHPDLRRILTDYGFEGHPLRKDFPLSGYFELRYDEDQR 162
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: K9LYV2_PHYVE (NADH dehydrogenase subunit 9 n=2 Tax=Phytopythium vexans TaxID=907947 RepID=K9LYV2_PHYVE) HSP 1 Score: 163 bits (412), Expect = 7.970e-48 Identity = 79/150 (52.67%), Postives = 110/150 (73.33%), Query Frame = 1
Query: 49 EVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKEL 498
+V PII NE I + H ++ LK H N Q+KLLS I VD+IN + RF +IY++LS+ NNRL+VK+ +NE+ PVDS ++IY N++ ERE+ DM+GI+F N+PDLRRILTDYGFEG+P+RKDFPLSG++E+ Y++ KK +
Sbjct: 13 QVLPIINYTIYKNELCINIPHNKIIPIFFFLKNHTNSQFKLLSEICAVDYINKQKRFEIIYNLLSIRFNNRLKVKILINELQPVDSLVDIYKNADWSEREVWDMFGIFFLNHPDLRRILTDYGFEGHPLRKDFPLSGFLEVYYNELKKRV 162
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: D2Z200_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z200_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.100e-47 Identity = 77/152 (50.66%), Postives = 110/152 (72.37%), Query Frame = 1
Query: 43 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKEL 498
+ + PI + NE I V LL S+ LK H QYK+L+ ISGVD+ + RF ++YD+L+L NNRLRVK +V+E+TP+ S I+++ SN ERE+ D++G++F N+PDLRRILTDYGFEG+P+RK+FPLSGY+E+RYD+ +K +
Sbjct: 12 LQSLIPIDNTKLFKNEVIISVPSKYLLESIYFLKFHTQSQYKILTSISGVDYPQYQQRFEIVYDLLTLVYNNRLRVKTYVDEVTPLPSIISVFPCSNWWEREVWDLFGVFFLNHPDLRRILTDYGFEGHPLRKNFPLSGYVEVRYDESQKRV 163
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A0K2SSA4_PYTIN (NADH dehydrogenase subunit 9 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A0K2SSA4_PYTIN) HSP 1 Score: 162 bits (409), Expect = 2.270e-47 Identity = 79/150 (52.67%), Postives = 108/150 (72.00%), Query Frame = 1
Query: 49 EVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGKKEL 498
++ PII NE I + ++ L LK H N Q+K+LS I VD+IN K RF +IY++LS+ NNRL++KV +NE+ P+DS +NIY + ERE DM+GI+FNN+PDLRRILTDYGFEG+P+RKDFPLSGY+E+ Y++ KK +
Sbjct: 13 DILPIINYTFNKNELCINIPFNKIIPILFFLKNHTNSQFKILSDICVVDYINKKERFEIIYNLLSIRFNNRLKIKVCINELQPIDSIVNIYKAAGWSEREAWDMFGIFFNNHPDLRRILTDYGFEGHPLRKDFPLSGYLEVYYNELKKRV 162
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A8F0WH21_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Navicula veneta TaxID=138539 RepID=A0A8F0WH21_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.440e-47 Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = 1
Query: 31 NLIKMNEVFPIIRSFSPGNEDTIIVSHTNLLF-SLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN**EREI*DMYGIYFNNNPDLRRILTDYGFEGYPMRKDFPLSGYIELRYDQGK 489
N++K +FP I+ N++ + TNLL +L +K H YQ+K+L+CISGVD+ N YRF V+Y++LSL N+R RVK FVNEI PV+S NI++ +N E EI DMYGI+FNN+ L RILTDYGFEGYP+RKDFPLSG+ E RY K
Sbjct: 2 NILK---IFPFIK-LEIFNKEPCFIVKTNLLDKALFLMKNHFKYQFKMLTCISGVDYPNNTYRFQVVYELLSLKFNSRTRVKCFVNEIIPVNSVENIFLGANWWECEIWDMYGIFFNNHSSLVRILTDYGFEGYPLRKDFPLSGFYESRYHHTK 151 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1582.1.1 >prot_P-littoralis_Contig1582.1.1 ID=prot_P-littoralis_Contig1582.1.1|Name=mRNA_P-littoralis_Contig1582.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=98bp MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVback to top mRNA from alignment at P-littoralis_Contig1582:851..1404+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1582.1.1 ID=mRNA_P-littoralis_Contig1582.1.1|Name=mRNA_P-littoralis_Contig1582.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=554bp|location=Sequence derived from alignment at P-littoralis_Contig1582:851..1404+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1582:851..1404+ >mRNA_P-littoralis_Contig1582.1.1 ID=mRNA_P-littoralis_Contig1582.1.1|Name=mRNA_P-littoralis_Contig1582.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=294bp|location=Sequence derived from alignment at P-littoralis_Contig1582:851..1404+ (Pylaiella littoralis U1_48)back to top |